{ "uniprot_canonical_ac": "Q5PQP1-1", "uniprot_ac": "Q5PQP1", "uniprot_id": "RBMS1_RAT", "mass": { "chemical_mass": 44068.0, "monoisotopic_mass": 44068.0 }, "refseq": { "ac": "NP_001012184", "name": "RNA-binding motif, single-stranded-interacting protein 1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001012184" }, "gene_names": [ { "name": "Rbms1", "resource": "UniProtKB", "type": "recommended", "url": "https://www.uniprot.org/uniprot/Q5PQP1", "id": "Q5PQP1" }, { "name": "Rbms1", "resource": "RefSeq", "type": "synonym", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001012184", "id": "NP_001012184" } ], "protein_names": [ { "name": "RNA-binding motif, single-stranded-interacting protein 1", "resource": "UniProtKB", "type": "recommended", "url": "", "id": "Q5PQP1" }, { "name": "RNA-binding motif, single-stranded-interacting protein 1", "resource": "RefSeq", "type": "synonym", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001012184", "id": "NP_001012184" } ], "function": [ { "annotation": "Single-stranded DNA binding protein that interacts with the region upstream of the MYC gene. Binds specifically to the DNA sequence motif 5'-[AT]CT[AT][AT]T-3'. Probably has a role in DNA replication (By similarity).", "evidence": [ { "database": "UniProtKB", "id": "Q5PQP1", "url": "https://www.uniprot.org/uniprot/Q5PQP1#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "Q5PQP1", "url": "https://www.uniprot.org/uniprot/Q5PQP1" } ], "common_name": "Rat" } ], "gene": [ { "name": "Rbms1", "url": "https://www.uniprot.org/uniprot/Q5PQP1", "locus": { "chromosome": "3", "start_pos": 45197972, "end_pos": 45420376, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSRNOG00000008482", "url": "https://www.ensembl.org/id/ENSRNOG00000008482" } ] } } ], "crossref": [ { "id": "ENSRNOG00000008482", "url": "https://bgee.org/?page=gene&gene_id=ENSRNOG00000008482", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd12470", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd12470", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd12473", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd12473", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "362138", "url": "https://www.ncbi.nlm.nih.gov/gene/362138", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000504", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000504", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002343", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002343", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR012677", "url": "https://www.ebi.ac.uk/interpro/entry/IPR012677", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR034404", "url": "https://www.ebi.ac.uk/interpro/entry/IPR034404", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035979", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035979", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "rno:362138", "url": "https://www.genome.jp/dbget-bin/get_linkdb?-t+pathway+rno:362138", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "GWAMIFP", "url": "https://omabrowser.org/oma/group/GWAMIFP/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "129910at2759", "url": "http://www.orthodb.org/?query=129910at2759", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24012", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24012", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24012:SF702", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24012:SF702", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00076", "url": "http://pfam.xfam.org/family/PF00076", "database": "Pfam", "categories": [ "Protein Classification" ] }, { "id": "PR_Q5PQP1", "url": "http://purl.obolibrary.org/obo/PR_Q5PQP1", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_001012184", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001012184", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "1307777", "url": "http://rgd.mcw.edu/tools/genes/genes_view.cgi?id=1307777", "database": "RGD", "categories": [ "Organism-specific" ] }, { "id": "A0A0G2K4R7", "url": "https://www.uniprot.org/uniprot/A0A0G2K4R7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A0G2K4R7-1", "url": "https://www.uniprot.org/uniprot/A0A0G2K4R7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8I5Y9I4", "url": "https://www.uniprot.org/uniprot/A0A8I5Y9I4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8I5Y9I4-1", "url": "https://www.uniprot.org/uniprot/A0A8I5Y9I4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8I5ZLN8", "url": "https://www.uniprot.org/uniprot/A0A8I5ZLN8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8I5ZLN8-1", "url": "https://www.uniprot.org/uniprot/A0A8I5ZLN8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8I6AJP2", "url": "https://www.uniprot.org/uniprot/A0A8I6AJP2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8I6AJP2-1", "url": "https://www.uniprot.org/uniprot/A0A8I6AJP2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8I6B2A8", "url": "https://www.uniprot.org/uniprot/A0A8I6B2A8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8I6B2A8-1", "url": "https://www.uniprot.org/uniprot/A0A8I6B2A8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8I6G7B3", "url": "https://www.uniprot.org/uniprot/A0A8I6G7B3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8I6G7B3-1", "url": "https://www.uniprot.org/uniprot/A0A8I6G7B3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8L2Q545", "url": "https://www.uniprot.org/uniprot/A0A8L2Q545", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8L2Q545-1", "url": "https://www.uniprot.org/uniprot/A0A8L2Q545-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q5PQP1", "url": "https://www.uniprot.org/uniprot/Q5PQP1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q5PQP1-1", "url": "https://www.uniprot.org/uniprot/Q5PQP1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGKVWKQQMYPQYATYYYPQYLQAKQSLVPAHPMAPPSPSTTSSNNNSSSSSNSGWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPAAAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRVLRDSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKRQNPNKYIPNGRPWPREGEAGMTLTYDPTTAALHNGFYPSPYSIATNRMITQTSLTPYIASPVSAYQVQSPSWMQPQPYILQHPGAVLTPSMEHTMSLQPASMISPLAQQMSHLSLGSTGTYMPATSAMQGAYLPQYTHMQTATVPVEEASGQQQVTVETSNDHSPYTFPPNK", "length": 403, "header": "sp|Q5PQP1-1|RBMS1_RAT Isoform 1 of RNA-binding motif, single-stranded-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Rbms1 PE=2 SV=1 CANONICAL=Q5PQP1-1" }, "isoforms": [ { "isoform_ac": "A0A0G2K4R7-1", "url": "", "sequence": { "sequence": "MIFPSGSGHPGAAGGCRTPYRKQQSLVPAHPMAPPSPSTTSSNNNSSSSSNSGWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPAAAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRVLRDSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKRQNPNKYIPNGRPWPREGEGMTLTYDPTTAALHNGFYPSPYSIATNRMITQTSLTPYIASPVAKETREKKYRGPALKVQSPSWMQPQPYILQHPGAVLTPSMEHTMSLQPASMISPLAQQMSHLSLGSTGTYMPATSAMQGAYLPQYTHMQTATVPVEVASGQQQVTVETSNDHSPYTFPPNK", "length": 411, "header": "tr|A0A0G2K4R7-1|RBMS1_RAT Computationally mapped isoform of RNA-binding motif, single-stranded-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Rbms1 PE=2 SV=2 CANONICAL=Q5PQP1-1" }, "locus": { "chromosome": "3", "start_pos": 45330374, "end_pos": 45199484, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSRNOT00000087439.2", "url": "https://www.ensembl.org/id/ENSRNOT00000087439.2" }, { "database": "Ensembl Peptide", "id": "ENSRNOP00000073145.2", "url": "https://www.ensembl.org/id/ENSRNOP00000073145.2" } ] } }, { "isoform_ac": "A0A8I5Y9I4-1", "url": "", "sequence": { "sequence": "MGKVWKQQMYPQYATYYYPQYLQAKQSLVPAHPMAPPSPSTTSSNNNSSSSSNSGWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPAAAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRVLRDSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKRQNPNKYIPNGRPWPREGEAGMTLTYDPTTAALHNGFYPSPYSIATNRMITQTSLTPYIASPVSAYQVAKETREKKYRGPALKVQSPSWMQPQPYILQHPGAVLTPSMEHTMSLQPASMISPLAQQMSHLSLGSTGTVGGKLTSCFCQ", "length": 378, "header": "tr|A0A8I5Y9I4-1|RBMS1_RAT Computationally mapped isoform of RNA-binding motif, single-stranded-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Rbms1 PE=2 SV=1 CANONICAL=Q5PQP1-1" }, "locus": { "chromosome": "3", "start_pos": 45419937, "end_pos": 45202209, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSRNOT00000112740.1", "url": "https://www.ensembl.org/id/ENSRNOT00000112740.1" }, { "database": "Ensembl Peptide", "id": "ENSRNOP00000077414.1", "url": "https://www.ensembl.org/id/ENSRNOP00000077414.1" } ] } }, { "isoform_ac": "A0A8I5ZLN8-1", "url": "", "sequence": { "sequence": "MGKVWKQQMYPQYATYYYPQYLQAKQSLVPAHPMAPPSPSTTSSNNNSSSSSNSGWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPAAAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRVLRDSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKRQNPNKYIPNGRPWPREGEAGMTLTYDPTTAALHNGFYPSPYSIATNRMITQTSLTPYIASPVSAYQVQSPSWMQPQPYILQHPGAVLTPSMEHTMSLQPASMISPLAQQMSHLSLGSTGTYMPATSAMQGAYLPQYTHMQTATVPVEMYRREFLHEEGCEG", "length": 392, "header": "tr|A0A8I5ZLN8-1|RBMS1_RAT Computationally mapped isoform of RNA-binding motif, single-stranded-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Rbms1 PE=2 SV=1 CANONICAL=Q5PQP1-1" }, "locus": { "chromosome": "3", "start_pos": 45419937, "end_pos": 45198713, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSRNOT00000114670.1", "url": "https://www.ensembl.org/id/ENSRNOT00000114670.1" }, { "database": "Ensembl Peptide", "id": "ENSRNOP00000078893.1", "url": "https://www.ensembl.org/id/ENSRNOP00000078893.1" } ] } }, { "isoform_ac": "A0A8I6AJP2-1", "url": "", "sequence": { "sequence": "MIMLLLAPQQSLVPAHPMAPPSPSTTSSNNNSSSSSNSGWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPAAAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRVLRDSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKRQNPNKYIPNGRPWPREGEAGMTLTYDPTTAALHNGFYPSPYSIATNRMITQTSLTPYIASPVSAYQVQSPSWMQPQPYILQHPGAVLTPSMEHTMSLQPASMISPLAQQMSHLSLGSTGTYMPATSAMQGAYLPQYTHMQTATVPVEEASGQQQVTVETSNDHSPYTFPPNK", "length": 387, "header": "tr|A0A8I6AJP2-1|RBMS1_RAT Computationally mapped isoform of RNA-binding motif, single-stranded-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Rbms1 PE=2 SV=1 CANONICAL=Q5PQP1-1" }, "locus": { "chromosome": "3", "start_pos": 45338013, "end_pos": 45199484, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSRNOT00000101661.1", "url": "https://www.ensembl.org/id/ENSRNOT00000101661.1" }, { "database": "Ensembl Peptide", "id": "ENSRNOP00000094484.1", "url": "https://www.ensembl.org/id/ENSRNOP00000094484.1" } ] } }, { "isoform_ac": "A0A8I6B2A8-1", "url": "", "sequence": { "sequence": "MGKVWKQQMYPQYATYYYPQYLQAKQSLVPAHPMAPPSPSTTSSNNNSSSSSNSGWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPAAAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRVLRDSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSGMLFTHSFINPCSIYMRHLLPRWVLTVPSPSFHKAGMTLTYDPTTAALHNGFYPSPYSIATNRMITQTSLTPYIASPVSAYQVQSPSWMQPQPYILQHPGAVLTPSMEHTMSLQPASMISPLAQQMSHLSLGSTGTYMPATSAMQGAYLPQYTHMQTATVPVEEASGQQQVTVETSNDHSPYTFPPNK", "length": 401, "header": "tr|A0A8I6B2A8-1|RBMS1_RAT Computationally mapped isoform of RNA-binding motif, single-stranded-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Rbms1 PE=2 SV=1 CANONICAL=Q5PQP1-1" }, "locus": { "chromosome": "3", "start_pos": 45419937, "end_pos": 45199484, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSRNOT00000099437.1", "url": "https://www.ensembl.org/id/ENSRNOT00000099437.1" }, { "database": "Ensembl Peptide", "id": "ENSRNOP00000095266.1", "url": "https://www.ensembl.org/id/ENSRNOP00000095266.1" } ] } }, { "isoform_ac": "A0A8I6G7B3-1", "url": "", "sequence": { "sequence": "LILVLNSLHSLGFVLQQSLVPAHPMAPPSPSTTSSNNNSSSSSNSGWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPAAAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRVLRDSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSGMLFTHSFINPCSIYMRHLLPRWVLTVPSPSFHKAGMTLTYDPTTAALHNGFYPSPYSIATNRMITQTSLTPYIASPVSAYQVCTSGLVQSPSWMQPQPYILQHPGAVLTPSMEHTMSLQPASMISPLAQQMSHLSLGSTGTYMPATSAMQGAYLPQYTHMQTATVPVEEASGQQQVTVETSNDHSPYTFPPNK", "length": 398, "header": "tr|A0A8I6G7B3-1|RBMS1_RAT Computationally mapped isoform of RNA-binding motif, single-stranded-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Rbms1 PE=2 SV=1 CANONICAL=Q5PQP1-1" }, "locus": { "chromosome": "3", "start_pos": 45291119, "end_pos": 45199484, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSRNOT00000115982.1", "url": "https://www.ensembl.org/id/ENSRNOT00000115982.1" }, { "database": "Ensembl Peptide", "id": "ENSRNOP00000082356.1", "url": "https://www.ensembl.org/id/ENSRNOP00000082356.1" } ] } }, { "isoform_ac": "A0A8L2Q545-1", "url": "", "sequence": { "sequence": "MERRWLFQQSLVPAHPMAPPSPSTTSSNNNSSSSSNSGWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPAAAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRVLRDSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKRQNPNKYIPNGRPWPREGEAGMTLTYDPTTAALHNGFYPSPYSIATNRMITQTSLTPYIASPVSAYQVQSPSWMQPQPYILQHPGAVLTPSMEHTMSLQPASMISPLAQQMSHLSLGSTGTYMPATSAMQGAYLPQYTHMQTATVPVEEASGQQQVTVETSNDHSPYTFPPNK", "length": 386, "header": "tr|A0A8L2Q545-1|RBMS1_RAT Computationally mapped isoform of RNA-binding motif, single-stranded-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Rbms1 PE=2 SV=1 CANONICAL=Q5PQP1-1" }, "locus": { "chromosome": "3", "start_pos": 45338217, "end_pos": 45199484, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSRNOT00000011682.7", "url": "https://www.ensembl.org/id/ENSRNOT00000011682.7" }, { "database": "Ensembl Peptide", "id": "ENSRNOP00000011682.4", "url": "https://www.ensembl.org/id/ENSRNOP00000011682.4" } ] } }, { "isoform_ac": "Q5PQP1-1", "url": "", "sequence": { "sequence": "MGKVWKQQMYPQYATYYYPQYLQAKQSLVPAHPMAPPSPSTTSSNNNSSSSSNSGWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPAAAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRVLRDSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKRQNPNKYIPNGRPWPREGEAGMTLTYDPTTAALHNGFYPSPYSIATNRMITQTSLTPYIASPVSAYQVQSPSWMQPQPYILQHPGAVLTPSMEHTMSLQPASMISPLAQQMSHLSLGSTGTYMPATSAMQGAYLPQYTHMQTATVPVEEASGQQQVTVETSNDHSPYTFPPNK", "length": 403, "header": "sp|Q5PQP1-1|RBMS1_RAT Isoform 1 of RNA-binding motif, single-stranded-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Rbms1 PE=2 SV=1 CANONICAL=Q5PQP1-1" }, "locus": {} } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 208, "end_pos": 208, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "Phosphothreonine", "evidence": [ { "database": "UniProtKB", "id": "Q5PQP1", "url": "https://www.uniprot.org/uniprot/Q5PQP1" } ], "site_lbl": "Thr208" } ], "glycation": [], "keywords": [], "publication": [], "pathway": [ { "id": "rno:362138", "name": "", "url": "https://www.genome.jp/dbget-bin/get_linkdb?-t+pathway+rno:362138", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "P29558-1", "protein_name": "RNA-binding motif, single-stranded-interacting protein 1", "gene_name": "RBMS1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGKVWKQQMYPQYATYYYPQYLQAKQSLVPAHPMAPPSPSTTSSNNNSSSSSNSGWDQLSKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPAAAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKRQNPNKYIPNGRPWHREGEVRLAGMTLTYDPTTAAIQNGFYPSPYSIATNRMITQTSITPYIASPVSAYQVQSPSWMQPQPYILQHPGAVLTPSMEHTMSLQPASMISPLAQQMSHLSLGSTGTYMPATSAMQGAYLPQYAHMQTTAVPVEEASGQQQVAVETSNDHSPYTFQPNK", "length": 406 }, "evidence": [ { "id": "45235806", "url": "http://www.informatics.jax.org/homology/45235806", "database": "MGI" } ], "common_name": "Human" }, { "uniprot_canonical_ac": "Q91W59-1", "protein_name": "RNA-binding motif, single-stranded-interacting protein 1", "gene_name": "Rbms1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGKVWKQQMYPQYATYYYPQYLQAKQSLVPAHPMAPPSPSTTSSNNNSSSSSNSGWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPAAAQKAVSALKANGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRVLRDSSGASRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKRQNPNKYIPNGRPWPRDGEAGMTLTYDPTTAALHNGFYPSPYSIATNRMITQTSLTPYIASPVSAYQVQSPSWMQPQPYILQHPGAVLTPSMEHTMSLQPASMISPLAQQMSHLSLGSTGTYMPATSAMQGAYLPQYTHMQTAAVPVEEASGQQQVAVETSNDHSPYTFPPNK", "length": 403 }, "evidence": [ { "id": "45235806", "url": "http://www.informatics.jax.org/homology/45235806", "database": "MGI" } ], "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 5, "go_terms": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "Q5PQP1", "url": "https://www.uniprot.org/uniprot/Q5PQP1" } ], "pmid": "" }, { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "Q5PQP1", "url": "https://www.uniprot.org/uniprot/Q5PQP1" } ], "pmid": "" }, { "name": "mRNA 3'-UTR binding", "id": "GO:0003730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003730", "evidence": [ { "database": "UniProtKB", "id": "Q5PQP1", "url": "https://www.uniprot.org/uniprot/Q5PQP1" } ], "pmid": "" }, { "name": "poly(A) binding", "id": "GO:0008143", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008143", "evidence": [ { "database": "UniProtKB", "id": "Q5PQP1", "url": "https://www.uniprot.org/uniprot/Q5PQP1" } ], "pmid": "" }, { "name": "poly(U) RNA binding", "id": "GO:0008266", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008266", "evidence": [ { "database": "UniProtKB", "id": "Q5PQP1", "url": "https://www.uniprot.org/uniprot/Q5PQP1" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "ribonucleoprotein complex", "id": "GO:1990904", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990904", "evidence": [ { "database": "UniProtKB", "id": "Q5PQP1", "url": "https://www.uniprot.org/uniprot/Q5PQP1" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "Q5PQP1", "url": "https://www.uniprot.org/uniprot/Q5PQP1" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q5PQP1", "url": "https://www.uniprot.org/uniprot/Q5PQP1" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "DNA replication", "id": "GO:0006260", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006260", "evidence": [ { "database": "UniProtKB", "id": "Q5PQP1", "url": "https://www.uniprot.org/uniprot/Q5PQP1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 46, "end_pos": 48, "annotation": "n_glycosylation_sequon" }, { "start_pos": 47, "end_pos": 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"field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] } ] }