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"Other" ] }, { "id": "IPR025928", "url": "https://www.ebi.ac.uk/interpro/entry/IPR025928", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "sce:YLR110C", "url": "https://www.genome.jp/dbget-bin/get_linkdb?-t+pathway+sce:YLR110C", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "SCEDHAC", "url": "https://omabrowser.org/oma/group/SCEDHAC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "2015320at2759", "url": "http://www.orthodb.org/?query=2015320at2759", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PF13928", "url": "http://pfam.xfam.org/family/PF13928", "database": "Pfam", "categories": [ "Protein Classification" ] }, { "id": "PR_Q12127", "url": "http://purl.obolibrary.org/obo/PR_Q12127", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_013211", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_013211", "database": "RefSeq", "categories": [ "Protein" ] }, { 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"sp|Q12127-1|CCW12_YEAST Isoform 1 of Covalently-linked cell wall protein 12 OS=Saccharomyces cerevisiae S288C OX=559292 GN=CCW12 PE=1 SV=1 CANONICAL=Q12127-1" }, "locus": { "chromosome": "XII", "start_pos": 370098, "end_pos": 369700, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "YLR110C_mRNA", "url": "https://www.ensembl.org/id/YLR110C_mRNA" }, { "database": "Ensembl Peptide", "id": "YLR110C", "url": "https://www.ensembl.org/id/YLR110C" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "site_category": "reported", "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "start_pos": 21, "start_aa": "Asn", "end_pos": 21, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn21", "evidence": [ { "id": "Q12127", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/Q12127#ptm_processing" }, { "id": "17315267", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/17315267" } 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] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "site_category": "reported", "site_seq": "S", "relation": "attached", "comment": "O-linked (Man) serine", "start_pos": 31, "start_aa": "Ser", "end_pos": 31, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser31", "evidence": [ { "id": "Q12127", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/Q12127#ptm_processing" }, { "id": "15165243", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/15165243" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "site_category": "reported", "site_seq": "T", "relation": "attached", "comment": "O-linked (Man) threonine", "start_pos": 32, "start_aa": "Thr", "end_pos": 32, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr32", "evidence": [ { "id": "Q12127", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/Q12127#ptm_processing" }, { "id": "15165243", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/15165243" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "site_category": "reported", "site_seq": "T", "relation": "attached", "comment": "O-linked (Man) threonine", "start_pos": 33, "start_aa": "Thr", "end_pos": 33, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr33", "evidence": [ { "id": "Q12127", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/Q12127#ptm_processing" }, { "id": "15165243", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/15165243" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "site_category": "reported", "site_seq": "T", "relation": "attached", "comment": "O-linked (Man) threonine", "start_pos": 36, "start_aa": "Thr", "end_pos": 36, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr36", "evidence": [ { "id": "Q12127", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/Q12127#ptm_processing" }, { "id": "15165243", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/15165243" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "site_category": "reported", "site_seq": "T", "relation": "attached", "comment": "O-linked (Man) threonine", "start_pos": 38, "start_aa": "Thr", "end_pos": 38, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr38", "evidence": [ { "id": "Q12127", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/Q12127#ptm_processing" }, { "id": "15165243", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/15165243" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "site_category": "reported", "site_seq": "S", "relation": "attached", "comment": "O-linked (Man) serine", "start_pos": 39, "start_aa": "Ser", "end_pos": 39, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser39", "evidence": [ { "id": "Q12127", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/Q12127#ptm_processing" }, { "id": "15165243", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/15165243" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "site_category": "reported", "site_seq": "S", "relation": "attached", "comment": "O-linked (Man) serine", "start_pos": 46, "start_aa": "Ser", "end_pos": 46, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser46", "evidence": [ { "id": "Q12127", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/Q12127#ptm_processing" }, { "id": "15165243", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/15165243" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "site_category": "reported", "site_seq": "T", "relation": "attached", "comment": "O-linked (Man) threonine", "start_pos": 48, "start_aa": "Thr", "end_pos": 48, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr48", "evidence": [ { "id": "Q12127", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/Q12127#ptm_processing" }, { "id": "15165243", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/15165243" } ] }, { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "site_category": "reported", "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "start_pos": 81, "start_aa": "Asn", "end_pos": 81, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn81", "evidence": [ { "id": "Q12127", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/Q12127#ptm_processing" }, { "id": "17315267", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/17315267" } ] }, { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "site_category": "reported", "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "start_pos": 97, "start_aa": "Asn", "end_pos": 97, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn97", "evidence": [ { "id": "Q12127", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprot/Q12127#ptm_processing" }, { "id": "17315267", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/17315267" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_reported" ], "publication": [ { "title": "Deletion of new covalently linked cell wall glycoproteins alters the electrophoretic mobility of phosphorylated wall components of Saccharomyces cerevisiae.", "journal": "J. Bacteriol.", "date": "1999", "authors": "Lehle L., Nimtz M., Tanner W., Ecker M., Mrsa V., Strahl-Bolsinger S.", "evidence": [ { "database": "UniProtKB", "id": "Q12127", "url": "https://www.uniprot.org/uniprot/Q12127" } ], "reference": [ { "type": "PubMed", "id": "10322008", "url": "https://glygen.org/publication/PubMed/10322008" } ] }, { "title": "Global analysis of protein expression in yeast.", "journal": "Nature", "date": "2003", "authors": "Dephoure N., Weissman J.S., Howson R.W., Huh W.-K., O'Shea E.K., Belle A., Bower K., Ghaemmaghami S.", "evidence": [ { "database": "UniProtKB", "id": "Q12127", "url": "https://www.uniprot.org/uniprot/Q12127" } ], "reference": [ { "type": "PubMed", "id": "14562106", "url": "https://glygen.org/publication/PubMed/14562106" } ] }, { "title": "Sed1p and Srl1p are required to compensate for cell wall instability in Saccharomyces cerevisiae mutants defective in multiple GPI-anchored mannoproteins.", "journal": "Molecular microbiology", "date": "2004-06", "authors": "Hagen Ilja, Ecker Margit, Lagorce Arnaud, Francois Jean M, Sestak Sergej, Rachel Reinhard, Grossmann Guido, Hauser Nicole C, Hoheisel J\u00f6rg D, Tanner Widmar, Strahl Sabine", "evidence": [ { "database": "UniProtKB", "id": "Q12127", "url": "https://www.uniprot.org/uniprot/Q12127#ptm_processing" }, { "database": "UniProtKB", "id": "Q12127", "url": "https://www.uniprot.org/uniprot/Q12127" } ], "reference": [ { "type": "PubMed", "id": "15165243", "url": "https://glygen.org/publication/PubMed/15165243" } ] }, { "title": "Characterization of Ccw12p, a major key player in cell wall stability of Saccharomyces cerevisiae.", "journal": "Yeast (Chichester, England)", "date": "2007-04", "authors": "Ragni Enrico, Sipiczki Matthias, Strahl Sabine", "evidence": [ { "database": "UniProtKB", "id": "Q12127", "url": "https://www.uniprot.org/uniprot/Q12127#ptm_processing" }, { "database": "UniProtKB", "id": "Q12127", "url": "https://www.uniprot.org/uniprot/Q12127" } ], "reference": [ { "type": "PubMed", "id": "17315267", "url": "https://glygen.org/publication/PubMed/17315267" } ] }, { "title": "Approaching a complete repository of sequence-verified protein-encoding clones for Saccharomyces cerevisiae.", "journal": "Genome Res.", "date": "2007", "authors": "Hu Y., LaBaer J., Moreira D., Raphael J., Rolfs A., Zuo D., Richardson A., Simpson A.J.G., Zhu C., Harlow E., Camargo A.A., Jepson D., Kelley F., McCarron S., Taycher E., Kolodner R.D., Kane M.F., Williamson J., Berger M.F., Bulyk M.L., Bhullar B., Mohr S., Marsischky G., Murthy T.V.S.", "evidence": [ { "database": "UniProtKB", "id": "Q12127", "url": "https://www.uniprot.org/uniprot/Q12127" } ], "reference": [ { "type": "PubMed", "id": "17322287", "url": "https://glygen.org/publication/PubMed/17322287" } ] }, { "title": "Sites of ubiquitin attachment in Saccharomyces cerevisiae.", "journal": "Proteomics", "date": "2012", "authors": "Eng J.K., Fields S., Lo R.S., Starita L.M., von Haller P.D.", "evidence": [ { "database": "UniProtKB", "id": "Q12127", "url": "https://www.uniprot.org/uniprot/Q12127" } ], "reference": [ { "type": "PubMed", "id": "22106047", "url": "https://glygen.org/publication/PubMed/22106047" } ] }, { "title": "The reference genome sequence of Saccharomyces cerevisiae: Then and now.", "journal": "G3 (Bethesda)", "date": "2014", "authors": "Engel Stacia R, Dietrich Fred S, Fisk Dianna G, Binkley Gail, Balakrishnan Rama, Costanzo Maria C, Dwight Selina S, Hitz Benjamin C, Karra Kalpana, Nash Robert S, Weng Shuai, Wong Edith D, Lloyd Paul, Skrzypek Marek S, Miyasato Stuart R, Simison Matt, Cherry J Michael", "evidence": [ { "database": "UniProtKB", "id": "Q12127", "url": "https://www.uniprot.org/uniprot/Q12127" } ], "reference": [ { "type": "PubMed", "id": "24374639", "url": "https://glygen.org/publication/PubMed/24374639" } ] }, { "title": "Sequence analysis of a 37.6 kbp cosmid clone from the right arm of Saccharomyces cerevisiae chromosome XII, carrying YAP3, HOG1, SNR6, tRNA-Arg3 and 23 new open reading frames, among which several homologies to proteins involved in cell division control and to mammalian growth factors and other animal proteins are found.", "journal": "Yeast", "date": "1997", "authors": "Verhasselt P., Volckaert G.", "evidence": [ { "database": "UniProtKB", "id": "Q12127", "url": "https://www.uniprot.org/uniprot/Q12127" } ], "reference": [ { "type": "PubMed", "id": "9090053", "url": "https://glygen.org/publication/PubMed/9090053" } ] }, { "title": "The nucleotide sequence of Saccharomyces cerevisiae chromosome XII.", "journal": "Nature", "date": "1997", "authors": "Ansorge W., Duesterhoeft A., Hillier L.W., Mewes H.-W., Obermaier B., Scharfe M., Wambutt R., Wedler H., Verhasselt P., Rose M., Benes V., Brueckner M., Rieger M., Portetelle D., Delius H., Schwarz S., Kleine K., Floeth M., Schwager C., Voss H., Hoheisel J.D., Dubois E., Volckaert G., Andre B., Koetter P., Entian K.-D., Louis E.J., Vandenbol M., Johnston M., Pohl T.M., Goffeau A., Hani J., Hilger F., Messenguy F., Miosga T., Mueller-Auer S., Scherens B., Zimmermann F.K., Zollner A., Purnelle B., Urrestarazu L.A., Vierendeels F., Voet M., Albermann K., Hebling U., Heumann K., Heuss-Neitzel D., Hilbert H., Moestl D., Nentwich U., Piravandi E., Rechmann S., Riles L., Rinke M., Scholler P., Underwood A.P., Wedler E.", "evidence": [ { "database": "UniProtKB", "id": "Q12127", "url": "https://www.uniprot.org/uniprot/Q12127" } ], "reference": [ { "type": "PubMed", "id": "9169871", "url": "https://glygen.org/publication/PubMed/9169871" } ] }, { "title": "Characterization of two new genes down-regulated by alpha-factor.", "journal": "Yeast", "date": "1997", "authors": "Seidel J., Tanner W.", "evidence": [ { "database": "UniProtKB", "id": "Q12127", "url": "https://www.uniprot.org/uniprot/Q12127" } ], "reference": [ { "type": "PubMed", "id": "9234669", "url": "https://glygen.org/publication/PubMed/9234669" } ] }, { "title": "Screening for glycosylphosphatidylinositol (GPI)-dependent cell wall proteins in Saccharomyces cerevisiae.", "journal": "Mol. Gen. 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