{ "uniprot_canonical_ac": "Q08747-1", "uniprot_ac": "Q08747", "uniprot_id": "UAF30_YEAST", "mass": { "chemical_mass": 25967.0, "monoisotopic_mass": 25967.0 }, "refseq": { "ac": "NP_014938", "name": "Uaf30p", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_014938" }, "gene_names": [ { "name": "UAF30", "resource": "UniProtKB", "type": "recommended", "url": "https://www.uniprot.org/uniprot/Q08747", "id": "Q08747" }, { "name": "UAF30", "resource": "RefSeq", "type": "synonym", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_014938", "id": "NP_014938" } ], "protein_names": [ { "name": "Upstream activation factor subunit UAF30", "resource": "UniProtKB", "type": "recommended", "url": "", "id": "Q08747" }, { "name": "Uaf30p", "resource": "RefSeq", "type": "synonym", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_014938", "id": "NP_014938" }, { "name": "Upstream activation factor 30 KDa subunit", "resource": "UniProtKB", "type": "synonym", "url": "", "id": "Q08747" }, { "name": "p30", "resource": "UniProtKB", "type": "synonym", "url": "", "id": "Q08747" } ], "function": [ { "annotation": "Nonessential component of the UAF (upstream activation factor) complex which interacts with the upstream element of the RNA polymerase I promoter and forms a stable preinitiation complex. Together with SPT15/TBP UAF seems to stimulate basal transcription to a fully activated level. UAF30 seems to play a role in silencing transcription by RNA polymerase II.", "evidence": [ { "database": "UniProtKB", "id": "Q08747", "url": "https://www.uniprot.org/uniprot/Q08747#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "Q08747", "url": "https://www.uniprot.org/uniprot/Q08747" } ], "common_name": "Yeast" } ], "gene": [ { "name": "UAF30", "url": "https://www.uniprot.org/uniprot/Q08747", "locus": {} } ], "crossref": [ { "id": "cd10567", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd10567", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "854470", "url": "https://www.ncbi.nlm.nih.gov/gene/854470", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "Q08747", "url": "https://www.ebi.ac.uk/intact/interactors/id:Q08747*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "IPR003121", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003121", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR014876", "url": "https://www.ebi.ac.uk/interpro/entry/IPR014876", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019835", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019835", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036885", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036885", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "sce:YOR295W", "url": "https://www.genome.jp/dbget-bin/get_linkdb?-t+pathway+sce:YOR295W", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "FEMHKIL", "url": "https://omabrowser.org/oma/group/FEMHKIL/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "5490826at2759", "url": 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"sequence": { "sequence": "MAELNDYSTMIDILLSDMDLETVTTKKVRMALKEVYAIDVESQGKAINKLIRKHLDLVKERPRFERSLEDLLKENATLAIELTKEITVSKRSSGEEKNDSETKGTHVEKKKGTVSKSPISTRKVTLSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLELILGKSTNMFEMHKILASHMTEPKKISDCPPLIQEVRRKEKPIVSDSEQSDTKGI", "length": 228, "header": "sp|Q08747-1|UAF30_YEAST Isoform 1 of Upstream activation factor subunit UAF30 OS=Saccharomyces cerevisiae S288C OX=559292 GN=UAF30 PE=1 SV=1 CANONICAL=Q08747-1" }, "locus": { "chromosome": "XV", "start_pos": 869891, "end_pos": 869208, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "YOR295W_mRNA", "url": "https://www.ensembl.org/id/YOR295W_mRNA" }, { "database": "Ensembl Peptide", "id": "YOR295W", "url": "https://www.ensembl.org/id/YOR295W" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 218, "end_pos": 218, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "Phosphoserine", "evidence": [ { "database": "UniProtKB", "id": "Q08747", "url": "https://www.uniprot.org/uniprot/Q08747" }, { "database": "PubMed", "id": "17330950", "url": "https://glygen.org/publication/PubMed/17330950" }, { "database": "iPTMnet", "id": "Q08747", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q08747" }, { "database": "PubMed", "id": "1840795619684113", "url": "https://glygen.org/publication/PubMed/1840795619684113" }, { "database": "PubMed", "id": "20702584", "url": "https://glygen.org/publication/PubMed/20702584" }, { "database": "SGD", "id": "Q08747", "url": "https://www.yeastgenome.org/locus/Q08747" }, { "database": "PubMed", "id": "18407956", "url": "https://glygen.org/publication/PubMed/18407956" }, { "database": "PubMed", "id": "23749301", "url": "https://glygen.org/publication/PubMed/23749301" } ], "site_lbl": "Ser218" }, { "start_pos": 220, "end_pos": 220, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "Phosphoserine", "evidence": [ { "database": "UniProtKB", "id": "Q08747", "url": "https://www.uniprot.org/uniprot/Q08747" }, { "database": "PubMed", "id": "17330950", "url": "https://glygen.org/publication/PubMed/17330950" }, { "database": "iPTMnet", "id": "Q08747", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q08747" }, { "database": "PubMed", "id": "17563356", "url": "https://glygen.org/publication/PubMed/17563356" }, { "database": "PubMed", "id": "18407956", "url": "https://glygen.org/publication/PubMed/18407956" }, { "database": "PubMed", "id": "19684113", "url": "https://glygen.org/publication/PubMed/19684113" }, { "database": "PubMed", "id": "20702584", "url": "https://glygen.org/publication/PubMed/20702584" }, { "database": "SGD", "id": "Q08747", "url": "https://www.yeastgenome.org/locus/Q08747" }, { "database": "PubMed", "id": "23749301", "url": "https://glygen.org/publication/PubMed/23749301" } ], "site_lbl": "Ser220" }, { "start_pos": 223, "end_pos": 223, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "Phosphoserine", "evidence": [ { "database": "UniProtKB", "id": "Q08747", "url": "https://www.uniprot.org/uniprot/Q08747" }, { "database": "PubMed", "id": "17330950", "url": "https://glygen.org/publication/PubMed/17330950" }, { "database": "iPTMnet", "id": "Q08747", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q08747" }, { "database": "PubMed", "id": "19684113", "url": "https://glygen.org/publication/PubMed/19684113" }, { "database": "PubMed", "id": "20702584", "url": "https://glygen.org/publication/PubMed/20702584" }, { "database": "SGD", "id": "Q08747", "url": "https://www.yeastgenome.org/locus/Q08747" }, { "database": "PubMed", "id": "23749301", "url": "https://glygen.org/publication/PubMed/23749301" } ], "site_lbl": "Ser223" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Transcription of chromosomal rRNA genes by both RNA polymerase I and II in yeast uaf30 mutants lacking the 30 kDa subunit of transcription factor UAF.", "journal": "EMBO J.", "date": "2001", "authors": "Nomura M., Moore R., Young M.K., Vu L., Dodd J.A., Keener J., Oakes M.L., Eliason K., Siddiqi I.N.", "evidence": [ { "database": "UniProtKB", "id": "Q08747", "url": "https://www.uniprot.org/uniprot/Q08747" } ], "reference": [ { "type": "PubMed", "id": "11500378", "url": "https://glygen.org/publication/PubMed/11500378" } ] }, { "title": "Global analysis of protein localization in budding yeast.", "journal": "Nature", "date": "2003", "authors": "Weissman J.S., Carroll A.S., Howson R.W., Huh W.-K., O'Shea E.K., Falvo J.V., Gerke L.C.", "evidence": [ { "database": "UniProtKB", "id": "Q08747", "url": "https://www.uniprot.org/uniprot/Q08747" } ], "reference": [ { "type": "PubMed", "id": "14562095", "url": "https://glygen.org/publication/PubMed/14562095" } ] }, { "title": "Global analysis of protein expression in yeast.", "journal": "Nature", "date": "2003", "authors": "Dephoure N., Weissman J.S., Howson R.W., Huh W.-K., O'Shea E.K., Belle A., Bower K., Ghaemmaghami S.", "evidence": [ { "database": "UniProtKB", "id": "Q08747", "url": "https://www.uniprot.org/uniprot/Q08747" } ], "reference": [ { "type": "PubMed", "id": "14562106", "url": "https://glygen.org/publication/PubMed/14562106" } ] }, { "title": "Large-scale phosphorylation analysis of alpha-factor-arrested Saccharomyces cerevisiae.", "journal": "Journal of proteome research", "date": "2007-03", "authors": "Li Xue, Gerber Scott A, Rudner Adam D, Beausoleil Sean A, Haas Wilhelm, Vill\u00e9n Judit, Elias Joshua E, Gygi Steve P", "evidence": [ { "database": "UniProtKB", "id": "Q08747", "url": "https://www.uniprot.org/uniprot/Q08747" }, { "database": "iPTMnet", "id": "Q08747", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q08747" } ], "reference": [ { "type": "PubMed", "id": "17330950", "url": "https://glygen.org/publication/PubMed/17330950" } ] }, { "title": "Proteome-wide identification of in vivo targets of DNA damage checkpoint kinases.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2007-06-19", "authors": "Smolka Marcus B, Albuquerque Claudio P, Chen Sheng-hong, Zhou Huilin", "evidence": [ { "database": "iPTMnet", "id": "Q08747", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q08747" } ], "reference": [ { "type": "PubMed", "id": "17563356", "url": "https://glygen.org/publication/PubMed/17563356" } ] }, { "title": "A multidimensional chromatography technology for in-depth phosphoproteome analysis.", "journal": "Molecular & cellular proteomics : MCP", "date": "2008-07", "authors": "Albuquerque Claudio P, Smolka Marcus B, Payne Samuel H, Bafna Vineet, Eng Jimmy, Zhou Huilin", "evidence": [ { "database": "iPTMnet", "id": "Q08747", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q08747" } ], "reference": [ { "type": "PubMed", "id": "18407956", "url": "https://glygen.org/publication/PubMed/18407956" } ] }, { "title": "Characterization of the rapamycin-sensitive phosphoproteome reveals that Sch9 is a central coordinator of protein synthesis.", "journal": "Genes & development", "date": "2009-08-15", "authors": "Huber Alexandre, Bodenmiller Bernd, Uotila Aino, Stahl Michael, Wanka Stefanie, Gerrits Bertran, Aebersold Ruedi, Loewith Robbie", "evidence": [ { "database": "iPTMnet", "id": "Q08747", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q08747" } ], "reference": [ { "type": "PubMed", "id": "19684113", "url": "https://glygen.org/publication/PubMed/19684113" } ] }, { "title": "The rapamycin-sensitive phosphoproteome reveals that TOR controls protein kinase A toward some but not all substrates.", "journal": "Molecular biology of the cell", "date": "2010-10-01", "authors": "Soulard Alexandre, Cremonesi Alessio, Moes Suzette, Sch\u00fctz Fr\u00e9d\u00e9ric, Jen\u00f6 Paul, Hall Michael N", "evidence": [ { "database": "iPTMnet", "id": "Q08747", "url": 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Louis E.J., Hollenberg C.P., Maarse A.C., Marck C., Vandenbol M., Pohl T.M., Tobiasch E., Pearson B.M., Poirey R., Hand N.J., Goulding S.E., Daignan-Fornier B., Dujon B., Goffeau A., Grivell L.A., Hani J., Hernando Y., Hilger F., Madania A., Mannhaupt G., Zollner A., Aldea M., Alexandraki D., Bolotin-Fukuhara M., Fairhead C., Gancedo C., Purnelle B., Ramezani Rad M., Tarassov I.A., Tzermia M., Voet M., Albermann K., Bohn C., Boyer J., Dang V.-D., Gaillon L., Gamo F.-J., Habbig B., Hebling U., Heumann K., Hiesel R., Kalogeropoulos A., Katsoulou C., Parle-McDermott A.G., Pettersson B., Rechmann S., Sterky F., Teodoru C., Tettelin H., Unseld M., Valens M., Wolfe K.H., Zumstein E., de Haan M.", "evidence": [ { "database": "UniProtKB", "id": "Q08747", "url": "https://www.uniprot.org/uniprot/Q08747" } ], "reference": [ { "type": "PubMed", "id": "9169874", "url": "https://glygen.org/publication/PubMed/9169874" } ] } ], "pathway": [ { "id": "sce:YOR295W", "name": "", "url": 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