{ "uniprot_canonical_ac": "A0A8I5ZXK2-1", "uniprot_ac": "A0A8I5ZXK2", "uniprot_id": "A0A8I5ZXK2_RAT", "mass": { "chemical_mass": 47253.0, "monoisotopic_mass": 47253.0 }, "refseq": {}, "gene_names": [ { "name": "Emid1", "resource": "UniProtKB", "type": "recommended", "url": "https://www.uniprot.org/uniprot/A0A8I5ZXK2", "id": "A0A8I5ZXK2" } ], "protein_names": [ { "name": "EMI domain containing 1", "resource": "UniProtKB", "type": "synonym", "url": "", "id": "A0A8I5ZXK2" } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "A0A8I5ZXK2", "url": "https://www.uniprot.org/uniprot/A0A8I5ZXK2" } ], "common_name": "Rat" } ], "gene": [ { "name": "Emid1", "url": "https://www.uniprot.org/uniprot/A0A8I5ZXK2", "locus": { "chromosome": "14", "start_pos": 80000486, "end_pos": 80043620, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSRNOG00000033575", "url": "https://www.ensembl.org/id/ENSRNOG00000033575" } ] } } ], "crossref": [ { "id": "ENSRNOG00000033575", "url": "https://bgee.org/?page=gene&gene_id=ENSRNOG00000033575", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "685462", "url": "https://www.ncbi.nlm.nih.gov/gene/685462", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR008160", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008160", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011489", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011489", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "rno:685462", "url": "https://www.genome.jp/dbget-bin/get_linkdb?-t+pathway+rno:685462", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CEEXVAV", "url": "https://omabrowser.org/oma/group/CEEXVAV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "3062338at2759", "url": "http://www.orthodb.org/?query=3062338at2759", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR15427", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15427", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15427:SF23", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15427:SF23", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01391", "url": "http://pfam.xfam.org/family/PF01391", "database": "Pfam", "categories": [ "Protein Classification" ] }, { "id": "PF07546", "url": "http://pfam.xfam.org/family/PF07546", "database": "Pfam", "categories": [ "Protein Classification" ] }, { "id": "XP_008768593", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_008768593", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "1593795", "url": "http://rgd.mcw.edu/tools/genes/genes_view.cgi?id=1593795", "database": "RGD", "categories": [ "Organism-specific" ] }, { "id": "A0A8I5ZXK2", "url": "https://www.uniprot.org/uniprot/A0A8I5ZXK2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8I5ZXK2-1", "url": "https://www.uniprot.org/uniprot/A0A8I5ZXK2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8I6A757", "url": "https://www.uniprot.org/uniprot/A0A8I6A757", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8I6A757-1", "url": "https://www.uniprot.org/uniprot/A0A8I6A757-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8I6GER7", "url": "https://www.uniprot.org/uniprot/A0A8I6GER7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8I6GER7-1", "url": "https://www.uniprot.org/uniprot/A0A8I6GER7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "D4A468", "url": "https://www.uniprot.org/uniprot/D4A468", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "D4A468-1", "url": "https://www.uniprot.org/uniprot/D4A468-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGGPRAWTLLCLGLLLPGGGAAWNVPGARFSGRRNWCSYVVTRTVSCHVQNGTYLQRVLQSCPWPVGCPGNSYRTVVRPMYKVMYKTVTAREWRCCPGHSGVTCEEGSPGFLEPTWSGSSMRRMTVRPTAFSGCLNCSKVSELTERLRALEAKVAVLSVTEQTVSSVPATPEDSALLWGSPAARGSPGDGGLQDRVDSWELPGPTGPKGDTDRQDPIRIRGPPGPQGPPGRPGQTGAAGTPGKMGPPGPPGPPGPPGPPAPVGPPSAQVSLHGDPLLSNTFTEMGSHWPQGPTGPPGPPGPPGPMGPPGLPGPTGAPGSPGHMGTPGPSGPKGTSGPPGEKGERGLPGEPGPQGLMGFPGEPGPKGDPGEKSHWNQTWDPGQALMAQVPPASFEARGEDTQPTTRSSPPGDATRGAERVVVVALRGSTPGFLPQPGLDQLPPGTASSYLSLSSGTPVPCWS", "length": 461, "header": "tr|A0A8I5ZXK2-1|A0A8I5ZXK2_RAT Isoform 1 of EMI domain containing 1 OS=Rattus norvegicus OX=10116 GN=Emid1 PE=4 SV=1 CANONICAL=A0A8I5ZXK2-1" }, "isoforms": [ { "isoform_ac": "A0A8I5ZXK2-1", "url": "", "sequence": { "sequence": "MGGPRAWTLLCLGLLLPGGGAAWNVPGARFSGRRNWCSYVVTRTVSCHVQNGTYLQRVLQSCPWPVGCPGNSYRTVVRPMYKVMYKTVTAREWRCCPGHSGVTCEEGSPGFLEPTWSGSSMRRMTVRPTAFSGCLNCSKVSELTERLRALEAKVAVLSVTEQTVSSVPATPEDSALLWGSPAARGSPGDGGLQDRVDSWELPGPTGPKGDTDRQDPIRIRGPPGPQGPPGRPGQTGAAGTPGKMGPPGPPGPPGPPGPPAPVGPPSAQVSLHGDPLLSNTFTEMGSHWPQGPTGPPGPPGPPGPMGPPGLPGPTGAPGSPGHMGTPGPSGPKGTSGPPGEKGERGLPGEPGPQGLMGFPGEPGPKGDPGEKSHWNQTWDPGQALMAQVPPASFEARGEDTQPTTRSSPPGDATRGAERVVVVALRGSTPGFLPQPGLDQLPPGTASSYLSLSSGTPVPCWS", "length": 461, "header": "tr|A0A8I5ZXK2-1|A0A8I5ZXK2_RAT Isoform 1 of EMI domain containing 1 OS=Rattus norvegicus OX=10116 GN=Emid1 PE=4 SV=1 CANONICAL=A0A8I5ZXK2-1" }, "locus": { "chromosome": "14", "start_pos": 80043505, "end_pos": 80000970, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSRNOT00000098869.1", "url": "https://www.ensembl.org/id/ENSRNOT00000098869.1" }, { "database": "Ensembl Peptide", "id": "ENSRNOP00000082254.1", "url": "https://www.ensembl.org/id/ENSRNOP00000082254.1" } ] } }, { "isoform_ac": "A0A8I6A757-1", "url": "", "sequence": { "sequence": "MGGPRAWTLLCLGLLLPGGGAAWNVPGARFSGRRNWCSYVVTRTVSCHVQNGTYLQRVLQSCPWPVGCPGNSYRTVVRPMYKVMYKTVTAREWRCCPGHSGVTCEEGSPGFLEPTWSGSSMRRMTVRPTAFSGCLNCSKVSELTERLRALEAKVAVLSVTEQTVSSVPATPEDSALLWGSPAARGSPGDGGLQDRVDSWELPGPTGPKGDTDRQDPIRIRGPPGPQGPPGRPGQTGAAGTPGKMGPPGPPGPPGPPGPPAPVGPPSAQVSLHGDPLLSNTFTEMGSHWPQGPTGPPGPPGPPGPMGPPGLPGPTGAPGSPGHMGTPGPSGPKGTSGPPGEKGERGLPGEPGPQGLMGFPGEPGPKGDPGEKSHWGEGLHQLREALKILAERVLILETMIGLYEPDLGSGAGPDGTGTPSLLRGKRGGHPTNYQIITPRRRNERS", "length": 444, "header": "tr|A0A8I6A757-1|A0A8I6A757_RAT Computationally mapped isoform of EMI domain containing 1 OS=Rattus norvegicus OX=10116 GN=Emid1 PE=4 SV=1 CANONICAL=A0A8I5ZXK2-1" }, "locus": { "chromosome": "14", "start_pos": 80043505, "end_pos": 80001106, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSRNOT00000105678.1", "url": "https://www.ensembl.org/id/ENSRNOT00000105678.1" }, { "database": "Ensembl Peptide", "id": "ENSRNOP00000087090.1", "url": "https://www.ensembl.org/id/ENSRNOP00000087090.1" } ] } }, { "isoform_ac": "A0A8I6GER7-1", "url": "", "sequence": { "sequence": "MGGPRAWTLLCLGLLLPGGGAAWNVPGARFSGRRNWCSYVVTRTVSCHVQNGTYLQRVLQSCPWPVGCPGNSYRTVVRPMYKVMYKTVTAREWRCCPGHSGVTCEEGSPGFLEPTWSGSSMRRMTVRPTAFSGCLNCSKVSELTERLRALEAKVAVLSVTEQTVSSVPATPEDSALLWGSPAARGSPGDGGLQDRVDSWELPGPTGPKGDTDRQDPIRIRGPPGPQGPPGRPGQTGAAGTPGKMGPPGPPGPPGPPGPPAPVGPPSAQVSLHGDPLLSNTFTEMGSHWPQGPTGPPGPPGPPGPMGPPGLPGPTGAPGSPGHMGTPGPSGPKGTSGPPGEKGERGLPGEPGPQGLMGFPGEPGPKGDPGEKSHWAPSLQSFLQQQAQLELLARRVTLLEAIIWPEPDLGSGAGPDGTGTPSLLRGKRGGHPTNYQIITPRRRNERS", "length": 446, "header": "tr|A0A8I6GER7-1|A0A8I6GER7_RAT Computationally mapped isoform of EMI domain containing 1 OS=Rattus norvegicus OX=10116 GN=Emid1 PE=4 SV=1 CANONICAL=A0A8I5ZXK2-1" }, "locus": { "chromosome": "14", "start_pos": 80043505, "end_pos": 80001106, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSRNOT00000105384.1", "url": "https://www.ensembl.org/id/ENSRNOT00000105384.1" }, { "database": "Ensembl Peptide", "id": "ENSRNOP00000086266.1", "url": "https://www.ensembl.org/id/ENSRNOP00000086266.1" } ] } }, { "isoform_ac": "D4A468-1", "url": "", "sequence": { "sequence": "MVPAFTNPSSMPRWLTPGRNWCSYVVTRTVSCHVQNGTYLQRVLQSCPWPVGCPGNSYRTVVRPMYKVMYKTVTAREWRCCPGHSGVTCEEGSPGFLEPTWSGSSMRRMTVRPTAFSGCLNCSKVSELTERLRALEAKGEPGPKGDPGEKSHWGEGLHQLREALKILAERVLILETMIGLYEPDLGSGAGPDGTGTPSLLRGKRGGHPTNYQIITPRRRNERS", "length": 223, "header": "tr|D4A468-1|D4A468_RAT Computationally mapped isoform of EMI domain containing 1 OS=Rattus norvegicus OX=10116 GN=Emid1 PE=4 SV=1 CANONICAL=A0A8I5ZXK2-1" }, "locus": { "chromosome": "14", "start_pos": 80041356, "end_pos": 80001106, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSRNOT00000057361.3", "url": "https://www.ensembl.org/id/ENSRNOT00000057361.3" }, { "database": "Ensembl Peptide", "id": "ENSRNOP00000054173.2", "url": "https://www.ensembl.org/id/ENSRNOP00000054173.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [], "pathway": [ { "id": "rno:685462", "name": "", "url": "https://www.genome.jp/dbget-bin/get_linkdb?-t+pathway+rno:685462", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "Q91VF5-1", "protein_name": "EMI domain-containing protein 1", "gene_name": "Emid1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGGPRAWTLLCLGLLLPGGGAAWSVPGARFSGRRNWCSYVVTRTVSCHVQNGTYLQRVLQNCPWPMGCPGNSYRTVVRPLYKVTYKTVTAREWRCCPGHSGVTCEEGSPGLLEPTWTDSGMRRMAVRPTALSGCLNCSKVSELTERLKALEAKVAVLSVTEQTVPSVPATPEDSALLWGSPAARGSPGDGSLQDRLDSWGLPGPTGPKGGTDSQSPVRIRGPPGPQGPPGRPGQTGAAGTPGKMGPPGPPGPPGPPGPPAPVGPPYGQVSLHGDPLLSNTFTEMGSHWPQGPTGPPGPPGPPGPMGPPGLPGPMGAPGSPGHMGIPGPSGPKGTSGHPGEKGERGLPGEPGPQGLMGVPGEPGPKGDPGEKSHWGEGLHQLREALKILAERVLILETMIGLYEPDLGSGAGPDGTGTPSLLRGKRGGHPTNYPIITPRRRSERS", "length": 444 }, "evidence": [ { "id": "45234478", "url": "http://www.informatics.jax.org/homology/45234478", "database": "MGI" } ], "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q96A84-1", "protein_name": "EMI domain-containing protein 1", "gene_name": "EMID1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGGPRAWALLCLGLLLPGGGAAWSIGAAPFSGRRNWCSYVVTRTISCHVQNGTYLQRVLQNCPWPMSCPGSSYRTVVRPTYKVMYKIVTAREWRCCPGHSGVSCEEASSASLEPMWSGSTMRRMALRPTAFSGCLNCSKVSELTERLKVLEAKMTMLTVIEQPVPPTPATPEDPAPLWGPPPAQGSPGDGGLQDQVGAWGLPGPTGPKGDAGSRGPMGMRGPPGPQGPPGSPGRAGAVGTPGERGPPGPPGPPGPPGPPAPVGPPHARISQHGDPLLSNTFTETNNHWPQGPTGPPGPPGPMGPPGPPGPTGVPGSPGHIGPPGPTGPKGISGHPGEKGERGLRGEPGPQGSAGQRGEPGPKGDPGEKSHWGEGLHQLREALKILAERVLILETMIGLYEPELGSGAGPAGTGTPSLLRGKRGGHATNYRIVAPRSRDERG", "length": 441 }, "evidence": [ { "id": "45234478", "url": "http://www.informatics.jax.org/homology/45234478", "database": "MGI" } ], "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "A0A8I5ZXK2", "url": "https://www.uniprot.org/uniprot/A0A8I5ZXK2" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "A0A8I5ZXK2", "url": "https://www.uniprot.org/uniprot/A0A8I5ZXK2" } ], "pmid": "" }, { "name": "extracellular matrix", "id": "GO:0031012", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031012", "evidence": [ { "database": "UniProtKB", "id": "A0A8I5ZXK2", "url": "https://www.uniprot.org/uniprot/A0A8I5ZXK2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 136, "end_pos": 138, "annotation": "n_glycosylation_sequon" }, { "start_pos": 375, "end_pos": 377, "annotation": "n_glycosylation_sequon" }, { "start_pos": 51, "end_pos": 53, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "synthesized_glycans": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.mgi", "label": "MGI Homologs" } ], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] } ] }