{
    "bcoid": "GLY_000871",
    "title": "Dicty UniProtKB Xref KEGG PATHWAY",
    "description": "The Dicty UniProtKB Xref KEGG PATHWAY contains dicty [taxid:44689] UniProtKB canonical accessions cross-referenced ...",
    "filename": "dicty_protein_xref_kegg.csv",
    "filetype": "csv",
    "categories": {
        "species": [
            "Dictyostelium discoideum"
        ],
        "molecule": [
            "Protein"
        ],
        "tag": [
            "KEGG Pathway cross-references"
        ],
        "file_type": [
            "csv"
        ],
        "status": [
            "Reviewed"
        ],
        "scope": [
            "internal"
        ]
    },
    "minitable": {
        "content": [
            [
                "Q54PT0-1...",
                "protein_xref..."
            ],
            [
                "Q54PT1-1...",
                "protein_xref..."
            ]
        ],
        "headers": [
            "uniprotkb_ca...",
            "xref_key..."
        ],
        "colwidth": [
            "40%",
            "20%"
        ]
    },
    "sampledata": {
        "type": "table",
        "data": [
            [
                {
                    "type": "string",
                    "label": "uniprotkb_canonical_ac"
                },
                {
                    "type": "string",
                    "label": "xref_key"
                },
                {
                    "type": "string",
                    "label": "xref_id"
                },
                {
                    "type": "string",
                    "label": "xref_label"
                }
            ],
            [
                "Q54PT0-1",
                "protein_xref_kegg",
                "ddi:DDB_G0284351",
                ""
            ],
            [
                "Q54PT1-1",
                "protein_xref_kegg",
                "ddi:DDB_G0284349",
                ""
            ],
            [
                "Q54PT2-1",
                "protein_xref_kegg",
                "ddi:DDB_G0284347",
                ""
            ],
            [
                "Q54PT3-1",
                "protein_xref_kegg",
                "ddi:DDB_G0284345",
                ""
            ],
            [
                "Q54PT4-1",
                "protein_xref_kegg",
                "ddi:DDB_G0284343",
                ""
            ],
            [
                "Q54PT5-1",
                "protein_xref_kegg",
                "ddi:DDB_G0284443",
                ""
            ],
            [
                "Q54PT6-1",
                "protein_xref_kegg",
                "ddi:DDB_G0284341",
                ""
            ],
            [
                "Q54PT7-1",
                "protein_xref_kegg",
                "ddi:DDB_G0284339",
                ""
            ],
            [
                "Q54PT8-1",
                "protein_xref_kegg",
                "ddi:DDB_G0284337",
                ""
            ],
            [
                "Q54PT9-1",
                "protein_xref_kegg",
                "ddi:DDB_G0284183",
                ""
            ],
            [
                "Q54N46-1",
                "protein_xref_kegg",
                "ddi:DDB_G0285511",
                ""
            ],
            [
                "Q54N47-1",
                "protein_xref_kegg",
                "ddi:DDB_G0285509",
                ""
            ],
            [
                "Q54N44-1",
                "protein_xref_kegg",
                "ddi:DDB_G0285515",
                ""
            ],
            [
                "Q54N45-1",
                "protein_xref_kegg",
                "ddi:DDB_G0285513",
                ""
            ],
            [
                "Q54N42-1",
                "protein_xref_kegg",
                "ddi:DDB_G0285519",
                ""
            ],
            [
                "Q54N43-1",
                "protein_xref_kegg",
                "ddi:DDB_G0285517",
                ""
            ],
            [
                "Q54N40-1",
                "protein_xref_kegg",
                "ddi:DDB_G0285523",
                ""
            ],
            [
                "Q54N41-1",
                "protein_xref_kegg",
                "ddi:DDB_G0285521",
                ""
            ],
            [
                "Q54N48-1",
                "protein_xref_kegg",
                "ddi:DDB_G0285507",
                ""
            ],
            [
                "Q54N49-1",
                "protein_xref_kegg",
                "ddi:DDB_G0285505",
                ""
            ],
            [
                "Q54EB1-1",
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                "ddi:DDB_G0291686",
                ""
            ],
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                "Q54QV8-1",
                "protein_xref_kegg",
                "ddi:DDB_G0283573",
                ""
            ],
            [
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                "protein_xref_kegg",
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                ""
            ],
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                "Q54QV1-1",
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                "ddi:DDB_G0283745",
                ""
            ],
            [
                "O96070-1",
                "protein_xref_kegg",
                "ddi:DDB_G0290261",
                ""
            ],
            [
                "Q54QV0-1",
                "protein_xref_kegg",
                "ddi:DDB_G0283625",
                ""
            ],
            [
                "Q54QV4-1",
                "protein_xref_kegg",
                "ddi:DDB_G0283581",
                ""
            ],
            [
                "Q86AV4-1",
                "protein_xref_kegg",
                "ddi:DDB_G0276937",
                ""
            ],
            [
                "Q86AV5-1",
                "protein_xref_kegg",
                "ddi:DDB_G0276933",
                ""
            ],
            [
                "Q86AV6-1",
                "protein_xref_kegg",
                "ddi:DDB_G0276965",
                ""
            ],
            [
                "Q86HC9-1",
                "protein_xref_kegg",
                "ddi:DDB_G0275671",
                ""
            ],
            [
                "Q86HC2-1",
                "protein_xref_kegg",
                "ddi:DDB_G0275685",
                ""
            ],
            [
                "Q86HC3-1",
                "protein_xref_kegg",
                "ddi:DDB_G0275683",
                ""
            ],
            [
                "Q86HC7-1",
                "protein_xref_kegg",
                "ddi:DDB_G0275673",
                ""
            ],
            [
                "Q86HC4-1",
                "protein_xref_kegg",
                "ddi:DDB_G0275681",
                ""
            ],
            [
                "Q86HC5-1",
                "protein_xref_kegg",
                "ddi:DDB_G0275677",
                ""
            ],
            [
                "Q7Z1I0-1",
                "protein_xref_kegg",
                "ddi:DDB_G0289813",
                ""
            ],
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                "Q55BJ9-1",
                "protein_xref_kegg",
                "ddi:DDB_G0271106",
                ""
            ],
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                "Q55BJ8-1",
                "protein_xref_kegg",
                "ddi:DDB_G0271124",
                ""
            ],
            [
                "Q55BJ3-1",
                "protein_xref_kegg",
                "ddi:DDB_G0271130",
                ""
            ],
            [
                "Q55BJ2-1",
                "protein_xref_kegg",
                "ddi:DDB_G0271100",
                ""
            ],
            [
                "Q55BJ1-1",
                "protein_xref_kegg",
                "ddi:DDB_G0271098",
                ""
            ],
            [
                "Q55BJ0-1",
                "protein_xref_kegg",
                "ddi:DDB_G0271132",
                ""
            ],
            [
                "Q55BJ7-1",
                "protein_xref_kegg",
                "ddi:DDB_G0271104",
                ""
            ],
            [
                "Q55BJ6-1",
                "protein_xref_kegg",
                "ddi:DDB_G0271126",
                ""
            ],
            [
                "Q55BJ5-1",
                "protein_xref_kegg",
                "ddi:DDB_G0271128",
                ""
            ],
            [
                "Q55BJ4-1",
                "protein_xref_kegg",
                "ddi:DDB_G0271102",
                ""
            ],
            [
                "Q54GS1-1",
                "protein_xref_kegg",
                "ddi:DDB_G0289943",
                ""
            ],
            [
                "Q54JJ0-1",
                "protein_xref_kegg",
                "ddi:DDB_G0288057",
                ""
            ],
            [
                "Q54JJ1-1",
                "protein_xref_kegg",
                "ddi:DDB_G0288019",
                ""
            ],
            [
                "Q54JJ3-1",
                "protein_xref_kegg",
                "ddi:DDB_G0288015",
                ""
            ],
            [
                "Q54JJ4-1",
                "protein_xref_kegg",
                "ddi:DDB_G0288013",
                ""
            ],
            [
                "Q54JJ5-1",
                "protein_xref_kegg",
                "ddi:DDB_G0288011",
                ""
            ],
            [
                "Q54JJ6-1",
                "protein_xref_kegg",
                "ddi:DDB_G0288009",
                ""
            ],
            [
                "Q54JJ7-1",
                "protein_xref_kegg",
                "ddi:DDB_G0288007",
                ""
            ],
            [
                "Q54JJ8-1",
                "protein_xref_kegg",
                "ddi:DDB_G0288005",
                ""
            ],
            [
                "Q54JJ9-1",
                "protein_xref_kegg",
                "ddi:DDB_G0288003",
                ""
            ],
            [
                "Q54GS8-1",
                "protein_xref_kegg",
                "ddi:DDB_G0289935",
                ""
            ],
            [
                "Q54GS9-1",
                "protein_xref_kegg",
                "ddi:DDB_G0289933",
                ""
            ],
            [
                "Q86K98-1",
                "protein_xref_kegg",
                "ddi:DDB_G0277587",
                ""
            ],
            [
                "Q86K96-1",
                "protein_xref_kegg",
                "ddi:DDB_G0277129",
                ""
            ],
            [
                "Q86K95-1",
                "protein_xref_kegg",
                "ddi:DDB_G0277131",
                ""
            ],
            [
                "Q86K94-1",
                "protein_xref_kegg",
                "ddi:DDB_G0277135",
                ""
            ],
            [
                "Q86K93-1",
                "protein_xref_kegg",
                "ddi:DDB_G0277133",
                ""
            ],
            [
                "Q86K92-1",
                "protein_xref_kegg",
                "ddi:DDB_G0277207",
                ""
            ],
            [
                "Q86K91-1",
                "protein_xref_kegg",
                "ddi:DDB_G0277209",
                ""
            ],
            [
                "Q86K90-1",
                "protein_xref_kegg",
                "ddi:DDB_G0277211",
                ""
            ],
            [
                "Q9U3X4-1",
                "protein_xref_kegg",
                "ddi:DDB_G0280535",
                ""
            ],
            [
                "Q54KL3-1",
                "protein_xref_kegg",
                "ddi:DDB_G0287275",
                ""
            ],
            [
                "Q54KL2-1",
                "protein_xref_kegg",
                "ddi:DDB_G0287277",
                ""
            ],
            [
                "Q54WP9-1",
                "protein_xref_kegg",
                "ddi:DDB_G0279507",
                ""
            ],
            [
                "Q54KL0-1",
                "protein_xref_kegg",
                "ddi:DDB_G0287281",
                ""
            ],
            [
                "Q54KL7-1",
                "protein_xref_kegg",
                "ddi:DDB_G0287267",
                ""
            ],
            [
                "Q558Y9-1",
                "protein_xref_kegg",
                "ddi:DDB_G0272865",
                ""
            ],
            [
                "Q54KL5-1",
                "protein_xref_kegg",
                "ddi:DDB_G0287273",
                ""
            ],
            [
                "Q54KL4-1",
                "protein_xref_kegg",
                "ddi:DDB_G0287287",
                ""
            ],
            [
                "Q54WP3-1",
                "protein_xref_kegg",
                "ddi:DDB_G0279519",
                ""
            ],
            [
                "Q558Y5-1",
                "protein_xref_kegg",
                "ddi:DDB_G0272997",
                ""
            ],
            [
                "Q54KL9-1",
                "protein_xref_kegg",
                "ddi:DDB_G0287263",
                ""
            ],
            [
                "Q54KL8-1",
                "protein_xref_kegg",
                "ddi:DDB_G0287265",
                ""
            ],
            [
                "Q54WP7-1",
                "protein_xref_kegg",
                "ddi:DDB_G0279511",
                ""
            ],
            [
                "Q54WP6-1",
                "protein_xref_kegg",
                "ddi:DDB_G0279513",
                ""
            ],
            [
                "Q54WP5-1",
                "protein_xref_kegg",
                "ddi:DDB_G0279515",
                ""
            ],
            [
                "Q54WP4-1",
                "protein_xref_kegg",
                "ddi:DDB_G0279517",
                ""
            ]
        ]
    },
    "readme": "Name\n   - Dicty UniProtKB Xref KEGG PATHWAY\n\nVersion\n   - v-2.3.1\n\nCreated on\n  - \n\nModified on\n   - 2024-01-09T05:36:40\n\nCreated by\n   - Jeet Vora [jeetvora@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Jingyue Wu [jingyue.wu@email.gwu.edu]\n\nAuthors\n   - \n\nChecksum\n   - \n\nUsability Domain\n   - The Dicty UniProtKB Xref KEGG PATHWAY contains dicty [taxid:44689] UniProtKB canonical accessions cross-referenced to KEGG PATHWAY database accessions/identifiers. The dataset is derived from 2019-09 UniProtKB release. If you use this dataset please provide proper attribution to EMBL-EBI-UniProtKB and GlyGen\",\n        KEGG PATHWAY is a collection of manually drawn pathway maps representing our knowledge on the molecular interaction, reaction and relation networks.\n\nDescription Domain\n   Keywords\n   - pathways\n   - reactions\n   - KEGG Pathway\n   - cross-reference\n\n   Pipeline Steps\n   - Step-1: The script loads the UniProtKB canonical accessions that are cross-referenced to KEGG PATHWAY database accessions/identifiers from the triplestore containing triples from nt file and extracts the data as a csv dataset\n\nExecution Domain\n   Scripts   - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-protein-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: uniprot-proteome-dictyostelium-discoideum.nt\n      URI: https:/data.glygen.org/ln2downloads/ebi/2023_10_30/uniprot-proteome-dictyostelium-discoideum.nt\n   Output Subdomain\n      Name: dicty_protein_xref_kegg.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.3.1/reviewed/dicty_protein_xref_kegg.csv\n      Name: dicty_protein_xref_kegg.stat.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.3.1/reviewed/dicty_protein_xref_kegg.stat.csv\n\nFields\n      Name: \"uniprotkb_canonical_ac\"\n     Description: \"\"\n      Unique Values: \"12714\"\n      Name: \"xref_key\"\n     Description: \"Source key associated to the  xref_id\"\n      Unique Values: \"1\"\n      Name: \"xref_id\"\n     Description: \"ID of the X-ref\"\n      Unique Values: \"13094\"\n      Name: \"xref_label\"\n     Description: \"Label/Name associated with x-ref\"\n      Unique Values: \"1\"",
    "downloadurl": "/ln2data/releases/data/v-2.3.1/reviewed/dicty_protein_xref_kegg.csv"
}