{ "bcoid": "GLY_000728", "title": "Human UniProtKB xref GlyConnect", "description": "Human UniProtKB xref GlyConnect dataset contains human(taxid: 9606) UniProtKB canonical accessions mapped ...", "filename": "human_protein_xref_glyconnect.csv", "filetype": "csv", "categories": { "species": [ "Homo sapiens" ], "molecule": [ "Protein" ], "tag": [ "GlyConnect Cross-references" ], "file_type": [ "csv" ], "status": [ "Reviewed" ], "scope": [ "internal" ] }, "minitable": { "content": [ [ "Q6P1J9-1...", "protein_xref..." ], [ "Q6P1J9-1...", "protein_xref..." ] ], "headers": [ "uniprotkb_ca...", "xref_key..." ], "colwidth": [ "40%", "20%" ] }, "sampledata": { "type": "table", "data": [ [ { "type": "string", "label": "uniprotkb_canonical_ac" }, { "type": "string", "label": "xref_key" }, { "type": "string", "label": "xref_id" }, { "type": "string", "label": "xref_label" } ], [ "Q6P1J9-1", "protein_xref_glyconnect", "401", "" ], [ "Q6P1J9-1", "protein_xref_glyconnect", "87", "" ], [ "Q6P1J9-1", 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"protein_xref_glyconnect", "166", "" ], [ "Q6P1J9-1", "protein_xref_glyconnect", "1284", "" ], [ "Q6P1J9-1", "protein_xref_glyconnect", "1871", "" ], [ "Q6P1J9-1", "protein_xref_glyconnect", "2501", "" ], [ "Q6P1J9-1", "protein_xref_glyconnect", "3001", "" ], [ "Q6P1J9-1", "protein_xref_glyconnect", "3242", "" ], [ "Q6P1J9-1", "protein_xref_glyconnect", "1044", "" ], [ "Q6P1J9-1", "protein_xref_glyconnect", "1345", "" ], [ "Q6P1J9-1", "protein_xref_glyconnect", "1891", "" ] ] }, "readme": "Name\n - Human UniProtKB xref GlyConnect\n\nVersion\n - v-2.3.1\n\nCreated on\n - 2023-03-03T03:58:28.936Z\n\nModified on\n - 2023-03-03T03:58:29.019Z\n\nCreated by\n - Jeet Vora [jeetvora@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Jingyue Wu [jingyue.wu@email.gwu.edu]\n\nAuthors\n - \n\nChecksum\n - \n\nUsability Domain\n - Human UniProtKB xref GlyConnect dataset contains human(taxid: 9606) UniProtKB canonical accessions mapped to the GlyConnect IDs.\n\nDescription Domain\n Keywords\n - Xref\n - GlyConnect\n\n Pipeline Steps\n - Step-1: The script maps the UniProtKB accesions to the Glyconnect Database IDs\n\nExecution Domain\n Scripts - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-protein-dataset.py\n\n\n Software Prerequisites\n Name: Python\n Version: 2.7.5\n URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n Input Subdomain\n Name: human_proteoform_glycosylation_sites_glyconnect.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.3.1/reviewed/human_proteoform_glycosylation_sites_glyconnect.csv\n Output Subdomain\n Name: human_protein_xref_glyconnect.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.3.1/reviewed/human_protein_xref_glyconnect.csv\n Name: human_protein_xref_glyconnect.stat.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.3.1/reviewed/human_protein_xref_glyconnect.stat.csv\n\nFields\n Name: \"uniprotkb_canonical_ac\"\n Description: \"\"\n Unique Values: \"1212\"\n Name: \"xref_key\"\n Description: \"Source key associated to the xref_id\"\n Unique Values: \"1\"\n Name: \"xref_id\"\n Description: \"ID of the X-ref\"\n Unique Values: \"1935\"\n Name: \"xref_label\"\n Description: \"Label/Name associated with x-ref\"\n Unique Values: \"1\"", "downloadurl": "/ln2data/releases/data/v-2.3.1/reviewed/human_protein_xref_glyconnect.csv" }