{ "glytoucan_ac": "G08005PG", "number_monosaccharides": 18, "number_monosaccharides_suffix": "", "mass": 3683.31, "mass_pme": 4580.31, "tool_support": { "gnome_glygen_oglycans": "no", "sandbox": "yes", "gnome_glygen": "yes", "gnome": "yes", "gnome_glycotree_oglycans": "no", "pdb": "no", "gnome_glygen_nglycans": "yes", "gnome_glycotree_nglycans": "yes" }, "fully_determined": "yes", "missing_score": 0, "glycan_type": "Saccharide", "iupac": "alpha-D-Neup5Ac-(2->3)-beta-D-Galp-(1->3)-beta-D-GlcpNAc-(1->2)[alpha-D-Neup5Ac-(2->3)-beta-D-Galp-(1->3)-beta-D-GlcpNAc-(1->4)]-alpha-D-Manp-(1->3)[alpha-D-Neup5Ac-(2->3)-beta-D-Galp-(1->3)-beta-D-GlcpNAc-(1->2)[alpha-D-Neup5Ac-(2->3)-beta-D-Galp-(1->3)-beta-D-GlcpNAc-(1->6)]-alpha-D-Manp-(1->6)]-beta-D-Manp-(1->4)-beta-D-GlcpNAc-(1->4)[alpha-L-Fucp-(1->6)]-?-D-GlcNAc-ol", "wurcs": "WURCS=2.0/7,18,17/[h2122h_2*NCC/3=O][a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O][a1221m-1a_1-5]/1-2-3-4-2-5-6-2-5-6-4-2-5-6-2-5-6-7/a4-b1_a6-r1_b4-c1_c3-d1_c6-k1_d2-e1_d4-h1_e3-f1_f3-g2_h3-i1_i3-j2_k2-l1_k6-o1_l3-m1_m3-n2_o3-p1_p3-q2", "glycoct": "RES 1b:o-dglc-HEX-0:0|1:aldi 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:b-dglc-HEX-1:5 8s:n-acetyl 9b:b-dgal-HEX-1:5 10b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 11s:n-acetyl 12b:b-dglc-HEX-1:5 13s:n-acetyl 14b:b-dgal-HEX-1:5 15b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 16s:n-acetyl 17b:a-dman-HEX-1:5 18b:b-dglc-HEX-1:5 19s:n-acetyl 20b:b-dgal-HEX-1:5 21b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 22s:n-acetyl 23b:b-dglc-HEX-1:5 24s:n-acetyl 25b:b-dgal-HEX-1:5 26b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 27s:n-acetyl 28b:a-lgal-HEX-1:5|6:d LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(3+1)6d 6:6o(2+1)7d 7:7d(2+1)8n 8:7o(3+1)9d 9:9o(3+2)10d 10:10d(5+1)11n 11:6o(4+1)12d 12:12d(2+1)13n 13:12o(3+1)14d 14:14o(3+2)15d 15:15d(5+1)16n 16:5o(6+1)17d 17:17o(2+1)18d 18:18d(2+1)19n 19:18o(3+1)20d 20:20o(3+2)21d 21:21d(5+1)22n 22:17o(6+1)23d 23:23d(2+1)24n 24:23o(3+1)25d 25:25o(3+2)26d 26:26d(5+1)27n 27:1o(6+1)28d", "inchi": "InChI=1S/C140H230N10O102/c1-34-76(185)93(202)95(204)125(222-34)219-31-54(184)102(77(186)45(16-151)141-35(2)166)235-121-71(146-40(7)171)92(201)103(63(29-164)231-121)237-126-97(206)113(242-132-119(244-124-75(150-44(11)175)108(86(195)58(24-159)226-124)241-130-101(210)117(90(199)62(28-163)230-130)252-140(136(217)218)15-49(179)70(145-39(6)170)112(248-140)81(190)53(183)20-155)96(205)104(64(30-165)232-132)236-122-73(148-42(9)173)106(84(193)56(22-157)224-122)239-128-99(208)115(88(197)60(26-161)228-128)250-138(134(213)214)13-47(177)68(143-37(4)168)110(246-138)79(188)51(181)18-153)91(200)66(233-126)33-221-131-118(243-123-74(149-43(10)174)107(85(194)57(23-158)225-123)240-129-100(209)116(89(198)61(27-162)229-129)251-139(135(215)216)14-48(178)69(144-38(5)169)111(247-139)80(189)52(182)19-154)94(203)82(191)65(234-131)32-220-120-72(147-41(8)172)105(83(192)55(21-156)223-120)238-127-98(207)114(87(196)59(25-160)227-127)249-137(133(211)212)12-46(176)67(142-36(3)167)109(245-137)78(187)50(180)17-152/h34,45-132,151-165,176-210H,12-33H2,1-11H3,(H,141,166)(H,142,167)(H,143,168)(H,144,169)(H,145,170)(H,146,171)(H,147,172)(H,148,173)(H,149,174)(H,150,175)(H,211,212)(H,213,214)(H,215,216)(H,217,218)/t34-,45-,46-,47-,48-,49-,50+,51+,52+,53+,54+,55+,56+,57+,58+,59+,60+,61+,62+,63+,64+,65+,66+,67+,68+,69+,70+,71+,72+,73+,74+,75+,76+,77+,78+,79+,80+,81+,82+,83+,84+,85+,86+,87-,88-,89-,90-,91+,92+,93+,94-,95-,96-,97-,98+,99+,100+,101+,102+,103+,104+,105+,106+,107+,108+,109+,110+,111+,112+,113-,114-,115-,116-,117-,118-,119-,120+,121-,122-,123-,124-,125+,126-,127-,128-,129-,130-,131-,132+,137-,138-,139-,140-/m0/s1", "glycam": "", "smiles_isomeric": "C[C@H]1[C@H]([C@H]([C@@H]([C@@H](O1)OC[C@H]([C@H]([C@@H]([C@H](CO)NC(=O)C)O)O[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O[C@H]3[C@H]([C@H]([C@@H]([C@H](O3)CO[C@@H]4[C@H]([C@H]([C@@H]([C@H](O4)CO[C@H]5[C@@H]([C@H]([C@@H]([C@H](O5)CO)O)O[C@H]6[C@@H]([C@H]([C@H]([C@H](O6)CO)O)O[C@@]7(C[C@@H]([C@H]([C@@H](O7)[C@@H]([C@@H](CO)O)O)NC(=O)C)O)C(=O)O)O)NC(=O)C)O)O)O[C@H]8[C@@H]([C@H]([C@@H]([C@H](O8)CO)O)O[C@H]9[C@@H]([C@H]([C@H]([C@H](O9)CO)O)O[C@@]1(C[C@@H]([C@H]([C@@H](O1)[C@@H]([C@@H](CO)O)O)NC(=O)C)O)C(=O)O)O)NC(=O)C)O)O[C@@H]1[C@H]([C@H]([C@@H]([C@H](O1)CO)O[C@H]1[C@@H]([C@H]([C@@H]([C@H](O1)CO)O)O[C@H]1[C@@H]([C@H]([C@H]([C@H](O1)CO)O)O[C@@]1(C[C@@H]([C@H]([C@@H](O1)[C@@H]([C@@H](CO)O)O)NC(=O)C)O)C(=O)O)O)NC(=O)C)O)O[C@H]1[C@@H]([C@H]([C@@H]([C@H](O1)CO)O)O[C@H]1[C@@H]([C@H]([C@H]([C@H](O1)CO)O)O[C@@]1(C[C@@H]([C@H]([C@@H](O1)[C@@H]([C@@H](CO)O)O)NC(=O)C)O)C(=O)O)O)NC(=O)C)O)O)NC(=O)C)O)O)O)O", "inchi_key": { "key": "XHYNRADLNAPEAJ-KTAKGFGNSA-N", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/XHYNRADLNAPEAJ-KTAKGFGNSA-N" }, "byonic": "Hex(7)HexNAc(6)dHex(1)NeuAc(4)aldi(1) % 3683.31179031", "gwb": "redEnd--?D-GlcNAc,o(--4b1D-GlcNAc,p--4b1D-Man,p(--3a1D-Man,p(--2b1D-GlcNAc,p--3b1D-Gal,p--3a2D-NeuAc,p)--4b1D-GlcNAc,p--3b1D-Gal,p--3a2D-NeuAc,p)--6a1D-Man,p(--2b1D-GlcNAc,p--3b1D-Gal,p--3a2D-NeuAc,p)--6b1D-GlcNAc,p--3b1D-Gal,p--3a2D-NeuAc,p)--6a1L-Fuc,p$MONO,Und,0,0,redEnd", "species": [], "classification": [ { "type": { "name": "N-linked", "url": "http://bioportal.bioontology.org/ontologies/GLYCO/?p=classes&conceptid=N-glycan&jump_to_nav=true" }, "subtype": { "name": "Alditol-reduced" } }, { "type": { "name": "N-linked", "url": "http://bioportal.bioontology.org/ontologies/GLYCO/?p=classes&conceptid=N-glycan&jump_to_nav=true" }, "subtype": { "name": "Complex", "url": "http://bioportal.bioontology.org/ontologies/GLYCO/?p=classes&conceptid=complex_N-glycan&jump_to_nav=true" } }, { "type": { "name": "N-linked", "url": "http://bioportal.bioontology.org/ontologies/GLYCO/?p=classes&conceptid=N-glycan&jump_to_nav=true" }, "subtype": { "name": "Core-fucosylated" } } ], "enzyme": [ { "uniprot_canonical_ac": "Q9H553-1", "protein_name": "Alpha-1,3/1,6-mannosyltransferase ALG2", "gene": "ALG2", "gene_link": "https://www.uniprot.org/uniprot/Q9H553", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q9DBE8-1", "protein_name": "Alpha-1,3/1,6-mannosyltransferase ALG2", "gene": "Alg2", "gene_link": "https://www.uniprot.org/uniprot/Q9DBE8", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q9Y274-1", "protein_name": "Type 2 lactosamine alpha-2,3-sialyltransferase", "gene": "ST3GAL6", "gene_link": "https://www.uniprot.org/uniprot/Q9Y274", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q91Y74-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4", "gene": "St3gal4", "gene_link": "https://www.uniprot.org/uniprot/Q91Y74", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q8VIB3-1", "protein_name": "Type 2 lactosamine alpha-2,3-sialyltransferase", "gene": "St3gal6", "gene_link": "https://www.uniprot.org/uniprot/Q8VIB3", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q11206-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4", "gene": "ST3GAL4", "gene_link": "https://www.uniprot.org/uniprot/Q11206", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q11203-1", "protein_name": "CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase", "gene": "ST3GAL3", "gene_link": "https://www.uniprot.org/uniprot/Q11203", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "P97325-1", "protein_name": "CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase", "gene": "St3gal3", "gene_link": "https://www.uniprot.org/uniprot/P97325", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q9WTS2-1", "protein_name": "Alpha-(1,6)-fucosyltransferase", "gene": "Fut8", "gene_link": "https://www.uniprot.org/uniprot/Q9WTS2", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q9BYC5-1", "protein_name": "Alpha-(1,6)-fucosyltransferase", "gene": "FUT8", "gene_link": "https://www.uniprot.org/uniprot/Q9BYC5", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "P27808-1", "protein_name": "Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase", "gene": "Mgat1", "gene_link": "https://www.uniprot.org/uniprot/P27808", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "P26572-1", "protein_name": "Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase", "gene": "MGAT1", "gene_link": "https://www.uniprot.org/uniprot/P26572", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q9Y2C3-1", "protein_name": "Beta-1,3-galactosyltransferase 5", "gene": "B3GALT5", "gene_link": "https://www.uniprot.org/uniprot/Q9Y2C3", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q9JI67-1", "protein_name": "Beta-1,3-galactosyltransferase 5", "gene": "B3galt5", "gene_link": "https://www.uniprot.org/uniprot/Q9JI67", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "O54905-1", "protein_name": "Beta-1,3-galactosyltransferase 2", "gene": "B3galt2", "gene_link": "https://www.uniprot.org/uniprot/O54905", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "O43825-1", "protein_name": "Beta-1,3-galactosyltransferase 2", "gene": "B3GALT2", "gene_link": "https://www.uniprot.org/uniprot/O43825", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q921V5-1", "protein_name": "Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase", "gene": "Mgat2", "gene_link": "https://www.uniprot.org/uniprot/Q921V5", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q10469-1", "protein_name": "Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase", "gene": "MGAT2", "gene_link": "https://www.uniprot.org/uniprot/Q10469", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q9UQ53-1", "protein_name": "Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B", "gene": "MGAT4B", "gene_link": "https://www.uniprot.org/uniprot/Q9UQ53", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q9UM21-1", "protein_name": "Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A", "gene": "MGAT4A", "gene_link": "https://www.uniprot.org/uniprot/Q9UM21", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q9UBM8-1", "protein_name": "Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C", "gene": "MGAT4C", "gene_link": "https://www.uniprot.org/uniprot/Q9UBM8", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q9D306-1", "protein_name": "Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C", "gene": "Mgat4c", "gene_link": "https://www.uniprot.org/uniprot/Q9D306", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q812G0-1", "protein_name": "Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A", "gene": "Mgat4a", "gene_link": "https://www.uniprot.org/uniprot/Q812G0", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q812F8-1", "protein_name": "Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B", "gene": "Mgat4b", "gene_link": "https://www.uniprot.org/uniprot/Q812F8", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q8R4G6-1", "protein_name": "Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A", "gene": "Mgat5", "gene_link": "https://www.uniprot.org/uniprot/Q8R4G6", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q765H6-1", "protein_name": "Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B", "gene": "Mgat5b", "gene_link": "https://www.uniprot.org/uniprot/Q765H6", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q3V5L5-1", "protein_name": "Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B", "gene": "MGAT5B", "gene_link": "https://www.uniprot.org/uniprot/Q3V5L5", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q09328-1", "protein_name": "Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A", "gene": "MGAT5", "gene_link": "https://www.uniprot.org/uniprot/Q09328", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q9H3H5-1", "protein_name": "UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase", "gene": "DPAGT1", "gene_link": "https://www.uniprot.org/uniprot/Q9H3H5", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "P42867-1", "protein_name": "UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase", "gene": "Dpagt1", "gene_link": "https://www.uniprot.org/uniprot/P42867", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q9NP73-1", "protein_name": "Putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13", "gene": "ALG13", "gene_link": "https://www.uniprot.org/uniprot/Q9NP73", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q9D8C3-1", "protein_name": "Putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13", "gene": "Alg13", "gene_link": "https://www.uniprot.org/uniprot/Q9D8C3", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q9D081-1", "protein_name": "UDP-N-acetylglucosamine transferase subunit ALG14 homolog", "gene": "Alg14", "gene_link": "https://www.uniprot.org/uniprot/Q9D081", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q96F25-1", "protein_name": "UDP-N-acetylglucosamine transferase subunit ALG14 homolog", "gene": "ALG14", "gene_link": "https://www.uniprot.org/uniprot/Q96F25", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q8BML3-1", "protein_name": "N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase", "gene": "Glt28d2", "gene_link": "https://www.uniprot.org/uniprot/Q8BML3", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q9BT22-1", "protein_name": "Chitobiosyldiphosphodolichol beta-mannosyltransferase", "gene": "ALG1", "gene_link": "https://www.uniprot.org/uniprot/Q9BT22", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q921Q3-1", "protein_name": "Chitobiosyldiphosphodolichol beta-mannosyltransferase", "gene": "Alg1", "gene_link": "https://www.uniprot.org/uniprot/Q921Q3", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] } ], "crossref": [ { "id": "91855915", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/91855915", "database": "PubChem Compound" }, { "id": "252288826", "url": "https://pubchem.ncbi.nlm.nih.gov/substance/252288826", "database": "PubChem Substance" }, { "id": "12621", "url": "http://www.glycosciences.de/database/start.php?action=explore_linucsid&linucsid=12621", "database": "Glycosciences.de" }, { "id": "20580", "url": "https://www.genome.jp/dbget-bin/www_bget?carbbank+20580", "database": "CarbBank" }, { "id": "147257", "url": "https://www.ebi.ac.uk/chebi/searchId.do?chebiId=147257", "database": "ChEBI" }, { "id": "G08005PG", "url": "https://glytoucan.org/Structures/Glycans/G08005PG", "database": "GlyTouCan" }, { "id": "G08005PG", "url": "https://glygen.ccrc.uga.edu/sandbox/explore.html?G08005PG", "database": "SandBox" }, { "id": "G08005PG", "url": "https://gnome.glyomics.org/restrictions/GlyGen.StructureBrowser.html?focus=G08005PG", "database": "GNOme" }, { "id": "G08005PG", "url": "https://glycosmos.org/glycans/show/G08005PG", "database": "GlyCosmos" } ], "glycoprotein": [], "publication": [], "residues": [ { "id": "N1", "name": "N-glycan_a-D-Manp_1", "attachedby": "rxn.Q9H553-1", "detachedby": "", "parentid": "NC" }, { "id": "N1", "name": "N-glycan_a-D-Manp_1", "attachedby": "rxn.Q9DBE8-1", "detachedby": "", "parentid": "NC" }, { "id": "N101", "name": "N-glycan_a-D-NeupNAc_101", "attachedby": "rxn.Q9Y274-1", "detachedby": "", "parentid": "N86" }, { "id": "N101", "name": "N-glycan_a-D-NeupNAc_101", "attachedby": "rxn.Q91Y74-1", "detachedby": "", "parentid": "N86" }, { "id": "N101", "name": "N-glycan_a-D-NeupNAc_101", "attachedby": "rxn.Q8VIB3-1", "detachedby": "", "parentid": "N86" }, { "id": "N101", "name": "N-glycan_a-D-NeupNAc_101", "attachedby": "rxn.Q11206-1", "detachedby": "", "parentid": "N86" }, { "id": "N101", "name": "N-glycan_a-D-NeupNAc_101", "attachedby": "rxn.Q11203-1", "detachedby": "", "parentid": "N86" }, { "id": "N101", "name": "N-glycan_a-D-NeupNAc_101", "attachedby": "rxn.P97325-1", "detachedby": "", "parentid": "N86" }, { "id": "N15", "name": "N-glycan_a-L-Fucp_15", "attachedby": "rxn.Q9WTS2-1", "detachedby": "", "parentid": "NA" }, { "id": "N15", "name": "N-glycan_a-L-Fucp_15", "attachedby": "rxn.Q9BYC5-1", "detachedby": "", "parentid": "NA" }, { "id": "N2", "name": "N-glycan_b-D-GlcpNAc_2", "attachedby": "rxn.P27808-1", "detachedby": "", "parentid": "N1" }, { "id": "N2", "name": "N-glycan_b-D-GlcpNAc_2", "attachedby": "rxn.P26572-1", "detachedby": "", "parentid": "N1" }, { "id": "N28", "name": "N-glycan_b-D-Galp_28", "attachedby": "rxn.Q9Y2C3-1", "detachedby": "", "parentid": "N7" }, { "id": "N28", "name": "N-glycan_b-D-Galp_28", "attachedby": "rxn.Q9JI67-1", "detachedby": "", "parentid": "N7" }, { "id": "N28", "name": "N-glycan_b-D-Galp_28", "attachedby": "rxn.O54905-1", "detachedby": "", "parentid": "N7" }, { "id": "N28", "name": "N-glycan_b-D-Galp_28", "attachedby": "rxn.O43825-1", "detachedby": "", "parentid": "N7" }, { "id": "N33", "name": "N-glycan_a-D-NeupNAc_33", "attachedby": "rxn.Q9Y274-1", "detachedby": "", "parentid": "N28" }, { "id": "N33", "name": "N-glycan_a-D-NeupNAc_33", "attachedby": "rxn.Q91Y74-1", "detachedby": "", "parentid": "N28" }, { "id": "N33", "name": "N-glycan_a-D-NeupNAc_33", "attachedby": "rxn.Q8VIB3-1", "detachedby": "", "parentid": "N28" }, { "id": "N33", "name": "N-glycan_a-D-NeupNAc_33", "attachedby": "rxn.Q11206-1", "detachedby": "", "parentid": "N28" }, { "id": "N33", "name": "N-glycan_a-D-NeupNAc_33", "attachedby": "rxn.Q11203-1", "detachedby": "", "parentid": "N28" }, { "id": "N33", "name": "N-glycan_a-D-NeupNAc_33", "attachedby": "rxn.P97325-1", "detachedby": "", "parentid": "N28" }, { "id": "N4", "name": "N-glycan_a-D-Manp_4", "attachedby": "rxn.Q9H553-1", "detachedby": "", "parentid": "NC" }, { "id": "N4", "name": "N-glycan_a-D-Manp_4", "attachedby": "rxn.Q9DBE8-1", "detachedby": "", "parentid": "NC" }, { "id": "N44", "name": "N-glycan_b-D-Galp_44", "attachedby": "rxn.Q9Y2C3-1", "detachedby": "", "parentid": "N2" }, { "id": "N44", "name": "N-glycan_b-D-Galp_44", "attachedby": "rxn.Q9JI67-1", "detachedby": "", "parentid": "N2" }, { "id": "N44", "name": "N-glycan_b-D-Galp_44", "attachedby": "rxn.O54905-1", "detachedby": "", "parentid": "N2" }, { "id": "N44", "name": "N-glycan_b-D-Galp_44", "attachedby": "rxn.O43825-1", "detachedby": "", "parentid": "N2" }, { "id": "N5", "name": "N-glycan_b-D-GlcpNAc_5", "attachedby": "rxn.Q921V5-1", "detachedby": "", "parentid": "N4" }, { "id": "N5", "name": "N-glycan_b-D-GlcpNAc_5", "attachedby": "rxn.Q10469-1", "detachedby": "", "parentid": "N4" }, { "id": "N7", "name": "N-glycan_b-D-GlcpNAc_7", "attachedby": "rxn.Q9UQ53-1", "detachedby": "", "parentid": "N1" }, { "id": "N7", "name": "N-glycan_b-D-GlcpNAc_7", "attachedby": "rxn.Q9UM21-1", "detachedby": "", "parentid": "N1" }, { "id": "N7", "name": "N-glycan_b-D-GlcpNAc_7", "attachedby": "rxn.Q9UBM8-1", "detachedby": "", "parentid": "N1" }, { "id": "N7", "name": "N-glycan_b-D-GlcpNAc_7", "attachedby": "rxn.Q9D306-1", "detachedby": "", "parentid": "N1" }, { "id": "N7", "name": "N-glycan_b-D-GlcpNAc_7", "attachedby": "rxn.Q812G0-1", "detachedby": "", "parentid": "N1" }, { "id": "N7", "name": "N-glycan_b-D-GlcpNAc_7", "attachedby": "rxn.Q812F8-1", "detachedby": "", "parentid": "N1" }, { "id": "N73", "name": "N-glycan_a-D-NeupNAc_73", "attachedby": "rxn.Q9Y274-1", "detachedby": "", "parentid": "N44" }, { "id": "N73", "name": "N-glycan_a-D-NeupNAc_73", "attachedby": "rxn.Q91Y74-1", "detachedby": "", "parentid": "N44" }, { "id": "N73", "name": "N-glycan_a-D-NeupNAc_73", "attachedby": "rxn.Q8VIB3-1", "detachedby": "", "parentid": "N44" }, { "id": "N73", "name": "N-glycan_a-D-NeupNAc_73", "attachedby": "rxn.Q11206-1", "detachedby": "", "parentid": "N44" }, { "id": "N73", "name": "N-glycan_a-D-NeupNAc_73", "attachedby": "rxn.Q11203-1", "detachedby": "", "parentid": "N44" }, { "id": "N73", "name": "N-glycan_a-D-NeupNAc_73", "attachedby": "rxn.P97325-1", "detachedby": "", "parentid": "N44" }, { "id": "N86", "name": "N-glycan_b-D-Galp_86", "attachedby": "rxn.Q9Y2C3-1", "detachedby": "", "parentid": "N5" }, { "id": "N86", "name": "N-glycan_b-D-Galp_86", "attachedby": "rxn.Q9JI67-1", "detachedby": "", "parentid": "N5" }, { "id": "N86", "name": "N-glycan_b-D-Galp_86", "attachedby": "rxn.O54905-1", "detachedby": "", "parentid": "N5" }, { "id": "N86", "name": "N-glycan_b-D-Galp_86", "attachedby": "rxn.O43825-1", "detachedby": "", "parentid": "N5" }, { "id": "N9", "name": "N-glycan_b-D-GlcpNAc_9", "attachedby": "rxn.Q8R4G6-1", "detachedby": "", "parentid": "N4" }, { "id": "N9", "name": "N-glycan_b-D-GlcpNAc_9", "attachedby": "rxn.Q765H6-1", "detachedby": "", "parentid": "N4" }, { "id": "N9", "name": "N-glycan_b-D-GlcpNAc_9", "attachedby": "rxn.Q3V5L5-1", "detachedby": "", "parentid": "N4" }, { "id": "N9", "name": "N-glycan_b-D-GlcpNAc_9", "attachedby": "rxn.Q09328-1", "detachedby": "", "parentid": "N4" }, { "id": "NA", "name": "N-glycan_core_D-GlcNAc_A", "attachedby": "rxn.Q9H3H5-1", "detachedby": "", "parentid": "0" }, { "id": "NA", "name": "N-glycan_core_D-GlcNAc_A", "attachedby": "rxn.P42867-1", "detachedby": "", "parentid": "0" }, { "id": "NB", "name": "N-glycan_core_b-D-GlcpNAc_B", "attachedby": "rxn.Q9NP73-1", "detachedby": "", "parentid": "NA" }, { "id": "NB", "name": "N-glycan_core_b-D-GlcpNAc_B", "attachedby": "rxn.Q9D8C3-1", "detachedby": "", "parentid": "NA" }, { "id": "NB", "name": "N-glycan_core_b-D-GlcpNAc_B", "attachedby": "rxn.Q9D081-1", "detachedby": "", "parentid": "NA" }, { "id": "NB", "name": "N-glycan_core_b-D-GlcpNAc_B", "attachedby": "rxn.Q96F25-1", "detachedby": "", "parentid": "NA" }, { "id": "NB", "name": "N-glycan_core_b-D-GlcpNAc_B", "attachedby": "rxn.Q8BML3-1", "detachedby": "", "parentid": "NA" }, { "id": "NC", "name": "N-glycan_core_b-D-Manp_C", "attachedby": "rxn.Q9BT22-1", "detachedby": "", "parentid": "NB" }, { "id": "NC", "name": "N-glycan_core_b-D-Manp_C", "attachedby": "rxn.Q921Q3-1", "detachedby": "", "parentid": "NB" } ], "composition": [ { "name": "6-Deoxy-Hexose", "residue": "dhex", "count": 1, "cid": "840", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/840" }, { "name": "Hexose", "residue": "hex", "count": 7, "cid": "206", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/206" }, { "name": "N-Acetylhexosamine", "residue": "hexnac", "count": 6, "cid": "899", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/899" }, { "name": "Hexuronic Acid", "residue": "hexa", "count": 0, "cid": "610", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/610" }, { "name": "2-Amino-2-Deoxy-Hexose", "residue": "hexn", "count": 0, "cid": "739", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/739" }, { "name": "N-Acetyl-Neuraminic Acid", "residue": "neuac", "count": 4, "cid": "439197", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/439197" }, { "name": "N-Glycolyl-Neuraminic Acid", "residue": "neugc", "count": 0, "cid": "440001", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/440001" }, { "name": "Phosphate", "residue": "p", "count": 0, "cid": "1061", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/1061" }, { "name": "Pentose", "residue": "pent", "count": 0, "cid": "229", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/229" }, { "name": "Sulfate", "residue": "s", "count": 0, "cid": "1117", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/1117" }, { "name": "Other", "residue": "other", "count": 0 } ], "composition_expanded": [ { "name": "Alditol", "residue": "aldi", "count": 1 }, { "name": "6-Deoxy-Hexose", "residue": "dhex", "count": 1, "cid": "840", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/840" }, { "name": "6-Deoxy-Hexitol", "residue": "dhex+aldi", "count": 0 }, { "name": "L-Fucose", "residue": "fuc", "count": 1, "cid": "17106", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/17106" }, { "name": "L-Fucitol", "residue": "fuc+aldi", "count": 0, "cid": "445724", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/445724" }, { "name": "D-Galactose", "residue": "gal", "count": 4, "cid": "6036", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/6036" }, { "name": "D-Galacitol", "residue": "gal+aldi", "count": 0, "cid": "11850", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/11850" }, { "name": "D-Galactosamine", "residue": "galn", "count": 0, "cid": "24154", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/24154" }, { "name": "N-Acetyl-D-galactosamine", "residue": "galnac", "count": 0, "cid": "35717", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/35717" }, { "name": "N-Acetylgalactosaminitol", "residue": "galnac+aldi", "count": 0, "cid": "165880", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/165880" }, { "name": "D-Glucose", "residue": "glc", "count": 0, "cid": "5793", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/5793" }, { "name": "D-Glucitol", "residue": "glc+aldi", "count": 0, "cid": "5780", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/5780" }, { "name": "D-Glucuronic acid", "residue": "glca", "count": 0, "cid": "94715", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/94715" }, { "name": "D-Glucosamine", "residue": "glcn", "count": 0, "cid": "439213", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/439213" }, { "name": "N-Acetyl-D-Glucosamine", "residue": "glcnac", "count": 6, "cid": "439174", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/439174" }, { "name": "N-Acetyl-D-glucosaminitol", "residue": "glcnac+aldi", "count": 1, "cid": "165206", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/165206" }, { "name": "Hexose", "residue": "hex", "count": 7, "cid": "206", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/206" }, { "name": "N-Acetylhexosamine", "residue": "hexnac", "count": 6, "cid": "899", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/899" }, { "name": "Hexuronic Acid", "residue": "hexa", "count": 0, "cid": "610", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/610" }, { "name": "2-Amino-2-Deoxy-Hexose", "residue": "hexn", "count": 0, "cid": "739", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/739" }, { "name": "Hexitol", "residue": "hex+aldi", "count": 0, "cid": "453", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/453" }, { "name": "N-Acetylhexosaminitol", "residue": "hexnac+aldi", "count": 1 }, { "name": "L-Iduronic acid", "residue": "idoa", "count": 0, "cid": "441039", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/441039" }, { "name": "D-Mannose", "residue": "man", "count": 3, "cid": "18950", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/18950" }, { "name": "D-Mannitol", "residue": "man+aldi", "count": 0, "cid": "6251", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/6251" }, { "name": "D-Mannosamine", "residue": "mann", "count": 0, "cid": "440049", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/440049" }, { "name": "N-Acetyl-D-mannosamine", "residue": "mannac", "count": 0, "cid": "439281", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/439281" }, { "name": "Methyl", "residue": "me", "count": 0 }, { "name": "N-Acetyl-Neuraminic Acid", "residue": "neuac", "count": 4, "cid": "439197", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/439197" }, { "name": "N-Glycolyl-Neuraminic Acid", "residue": "neugc", "count": 0, "cid": "440001", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/440001" }, { "name": "Phosphate", "residue": "p", "count": 0, "cid": "1061", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/1061" }, { "name": "Pentose", "residue": "pent", "count": 0, "cid": "229", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/229" }, { "name": "Sulfate", "residue": "s", "count": 0, "cid": "1117", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/1117" }, { "name": "Sialic acid", "residue": "sia", "count": 4, "cid": "906", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/906" }, { "name": "Other", "residue": "other", "count": 0 }, { "name": "Floating substituent", "residue": "x", "count": 0 }, { "name": "D-Xylose", "residue": "xyl", "count": 0, "cid": "135191", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/135191" }, { "name": "Ketodeoxynononic acid", "residue": "kdn", "count": 0, "cid": "13991616", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/13991616" } ], "motifs": [ { "id": "GGM.000005", "name": "Type 1 LN", "synonym": "", "keywords": "LacNAc; N-acetyllactosamine; N-acetyllactosamine type 1" } ], "interactions": [], "expression": [], "subsumption": [ { "related_accession": "G16147FU", "relationship": "ancestor" }, { "related_accession": "G31822JI", "relationship": "ancestor" }, { "related_accession": "G56023AW", "relationship": "ancestor" }, { "related_accession": "G84022YT", "relationship": "ancestor" }, { "related_accession": "G84022YT", "relationship": "composition" }, { "related_accession": "G16147FU", "relationship": "subsumedby" }, { "related_accession": "G56023AW", "relationship": "topology" } ], "names": [], "keywords": [ "fully_determined" ], "glycotree_pathways": [], "dictionary": {} }