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"byonic": "Hex(7)HexNAc(6)dHex(4)NeuAc(1)aldi(1) % 3248.19926701", "gwb": "redEnd--?D-GlcNAc,o(--4b1D-GlcNAc,p--4b1D-Man,p(--3a1D-Man,p(--2b1D-GlcNAc,p--4b1D-Gal,p--6a2D-NeuAc,p)--4b1D-GlcNAc,p(--3a1L-Fuc,p)--4b1D-Gal,p--6b1D-GlcNAc,p(--3a1L-Fuc,p)--4b1D-Gal,p)--6a1D-Man,p--2b1D-GlcNAc,p(--3a1L-Fuc,p)--4b1D-Gal,p)--6a1L-Fuc,p$MONO,Und,0,0,redEnd", "species": [ { "taxid": 9606, "name": "Homo sapiens", "annotation_category": "Direct", "evidence": [ { "database": "GlyCosmos", "id": "G07817HH", "url": "https://glycosmos.org/glycans/show/G07817HH" } ], "common_name": "Human" } ], "classification": [ { "type": { "name": "N-linked", "url": "http://bioportal.bioontology.org/ontologies/GLYCO/?p=classes&conceptid=N-glycan&jump_to_nav=true" }, "subtype": { "name": "Alditol-reduced" } }, { "type": { "name": "N-linked", "url": "http://bioportal.bioontology.org/ontologies/GLYCO/?p=classes&conceptid=N-glycan&jump_to_nav=true" }, "subtype": { "name": "Arm-fucosylated" } }, { "type": { "name": "N-linked", "url": "http://bioportal.bioontology.org/ontologies/GLYCO/?p=classes&conceptid=N-glycan&jump_to_nav=true" }, "subtype": { "name": "Complex", "url": "http://bioportal.bioontology.org/ontologies/GLYCO/?p=classes&conceptid=complex_N-glycan&jump_to_nav=true" } }, { "type": { "name": "N-linked", "url": "http://bioportal.bioontology.org/ontologies/GLYCO/?p=classes&conceptid=N-glycan&jump_to_nav=true" }, "subtype": { "name": "Core-fucosylated" } } ], "enzyme": [ { "uniprot_canonical_ac": "Q9H553-1", "protein_name": "Alpha-1,3/1,6-mannosyltransferase ALG2", "gene": "ALG2", "gene_link": "https://www.uniprot.org/uniprot/Q9H553", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q9DBE8-1", "protein_name": "Alpha-1,3/1,6-mannosyltransferase ALG2", "gene": "Alg2", "gene_link": "https://www.uniprot.org/uniprot/Q9DBE8", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q96JF0-1", "protein_name": "Beta-galactoside alpha-2,6-sialyltransferase 2", "gene": "ST6GAL2", "gene_link": "https://www.uniprot.org/uniprot/Q96JF0", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q76K27-1", "protein_name": "Beta-galactoside alpha-2,6-sialyltransferase 2", "gene": "St6gal2", "gene_link": "https://www.uniprot.org/uniprot/Q76K27", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q64685-1", "protein_name": "Beta-galactoside alpha-2,6-sialyltransferase 1", 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"tax_common_name": "Human", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "P21217-1", "protein_name": "3-galactosyl-N-acetylglucosaminide 4-alpha-L-fucosyltransferase FUT3", "gene": "FUT3", "gene_link": "https://www.uniprot.org/uniprot/P21217", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "O88819-1", "protein_name": "4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9", "gene": "Fut9", "gene_link": "https://www.uniprot.org/uniprot/O88819", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "P27808-1", "protein_name": "Alpha-1,3-mannosyl-glycoprotein 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"https://pubchem.ncbi.nlm.nih.gov/compound/165206" }, { "name": "Hexose", "residue": "hex", "count": 7, "cid": "206", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/206" }, { "name": "N-Acetylhexosamine", "residue": "hexnac", "count": 6, "cid": "899", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/899" }, { "name": "Hexuronic Acid", "residue": "hexa", "count": 0, "cid": "610", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/610" }, { "name": "2-Amino-2-Deoxy-Hexose", "residue": "hexn", "count": 0, "cid": "739", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/739" }, { "name": "Hexitol", "residue": "hex+aldi", "count": 0, "cid": "453", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/453" }, { "name": "N-Acetylhexosaminitol", "residue": "hexnac+aldi", "count": 1 }, { "name": "L-Iduronic acid", "residue": "idoa", "count": 0, "cid": "441039", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/441039" }, { "name": "D-Mannose", "residue": "man", "count": 3, "cid": "18950", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/18950" }, { "name": "D-Mannitol", "residue": "man+aldi", "count": 0, "cid": "6251", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/6251" }, { "name": "D-Mannosamine", "residue": "mann", "count": 0, "cid": "440049", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/440049" }, { "name": "N-Acetyl-D-mannosamine", "residue": "mannac", "count": 0, "cid": "439281", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/439281" }, { "name": "Methyl", "residue": "me", "count": 0 }, { "name": "N-Acetyl-Neuraminic Acid", "residue": "neuac", "count": 1, "cid": "439197", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/439197" }, { "name": "N-Glycolyl-Neuraminic Acid", "residue": "neugc", "count": 0, "cid": "440001", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/440001" }, { "name": "Phosphate", "residue": "p", "count": 0, "cid": "1061", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/1061" }, { "name": "Pentose", "residue": "pent", "count": 0, "cid": "229", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/229" }, { "name": "Sulfate", "residue": "s", "count": 0, "cid": "1117", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/1117" }, { "name": "Sialic acid", "residue": "sia", "count": 1, "cid": "906", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/906" }, { "name": "Other", "residue": "other", "count": 0 }, { "name": "Floating substituent", "residue": "x", "count": 0 }, { "name": "D-Xylose", "residue": "xyl", "count": 0, "cid": "135191", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/135191" }, { "name": "Ketodeoxynononic acid", "residue": "kdn", "count": 0, "cid": "13991616", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/13991616" } ], "motifs": [ { "id": "GGM.000001", "name": "Type 2 LN", "synonym": "N-acetyllactosamine", "keywords": "LacNAc; N-acetyllactosamine; N-acetyllactosamine type 2" }, { "id": "GGM.000018", "name": "Lewis x", "synonym": "Le^x; Lex; SSEA-1", "keywords": "Lewis x" } ], "interactions": [], "expression": [], "subsumption": [ { "related_accession": "G17542QQ", "relationship": "ancestor" }, { "related_accession": "G44211BD", "relationship": "ancestor" }, { "related_accession": "G58062GQ", "relationship": "ancestor" }, { "related_accession": "G17542QQ", "relationship": "composition" }, { "related_accession": "G58062GQ", "relationship": "subsumedby" }, { "related_accession": "G58062GQ", "relationship": "topology" } ], "names": [], "keywords": [ "fully_determined" ], "glycotree_pathways": [], "dictionary": {} }