{ "glytoucan_ac": "G03196WF", "number_monosaccharides": 14, "number_monosaccharides_suffix": "", "mass": 2733.97, "mass_pme": 3392.71, "tool_support": { "gnome_glygen_oglycans": "no", "sandbox": "yes", "gnome_glygen": "yes", "gnome": "yes", "gnome_glycotree_oglycans": "no", "pdb": "no", "gnome_glygen_nglycans": "yes", "gnome_glycotree_nglycans": "no" }, "fully_determined": "", "missing_score": 1430, "glycan_type": "Saccharide", "iupac": "", "wurcs": "WURCS=2.0/9,14,13/[a2122h-1x_1-5_2*NCC/3=O][a1221m-1a_1-5][a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O][axxxxh-1x_1-5_2*NCC/3=O][axxxxh-1x_1-5]/1-2-3-4-5-3-6-7-5-3-6-7-8-9/a4-c1_c4-d1_d3-e1_d6-i1_e2-f1_i2-j1_a?-b1_f?-g1_g?-h2_j?-k1_k?-l2_m?-a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?|l?}_n?-a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?|l?}", "glycoct": "RES 1b:x-dglc-HEX-1:5 2b:a-lgal-HEX-1:5|6:d 3s:n-acetyl 4b:b-dglc-HEX-1:5 5s:n-acetyl 6b:b-dman-HEX-1:5 7b:a-dman-HEX-1:5 8b:b-dglc-HEX-1:5 9b:b-dgal-HEX-1:5 10b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 11s:n-acetyl 12s:n-acetyl 13b:a-dman-HEX-1:5 14b:b-dglc-HEX-1:5 15b:b-dgal-HEX-1:5 16b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 17s:n-acetyl 18s:n-acetyl LIN 1:1o(-1+1)2d 2:1d(2+1)3n 3:1o(4+1)4d 4:4d(2+1)5n 5:4o(4+1)6d 6:6o(3+1)7d 7:7o(2+1)8d 8:8o(-1+1)9d 9:9o(-1+2)10d 10:10d(5+1)11n 11:8d(2+1)12n 12:6o(6+1)13d 13:13o(2+1)14d 14:14o(-1+1)15d 15:15o(-1+2)16d 16:16d(5+1)17n 17:14d(2+1)18n UND UND1:100.0:100.0 ParentIDs:1|2|4|6|7|8|9|10|13|14|15|16 SubtreeLinkageID1:o(-1+-1)d RES 19b:x-HEX-1:5 UND2:100.0:100.0 ParentIDs:1|2|4|6|7|8|9|10|13|14|15|16 SubtreeLinkageID1:o(-1+-1)d RES 20b:x-HEX-1:5 21s:n-acetyl LIN 18:20d(2+1)21n", "inchi": "", "glycam": "", "smiles_isomeric": "", "inchi_key": {}, "byonic": "Hex(6)HexNAc(5)dHex(1)NeuAc(2) % 2733.97311086", "gwb": "freeEnd--1?1D-GlcNAc,p(--?a1L-Fuc,p)--4b1D-GlcNAc,p--4b1D-Man,p(--3a1D-Man,p--2b1D-GlcNAc,p--?b1D-Gal,p--?a2D-NeuAc,p)--6a1D-Man,p--2b1D-GlcNAc,p--?b1D-Gal,p--?a2D-NeuAc,p}(--??1HexNAc,p)--??1Hex,p$MONO,Und,0,0,freeEnd", "species": [ { "taxid": 10090, "name": "Mus musculus", "annotation_category": "Subsumption", "evidence": [ { "database": "GNOme", "id": "G64076LG", "url": "https://www.glygen.org/glycan/G64076LG" } ], "common_name": "Mouse" } ], "classification": [ { "type": { "name": "N-linked", "url": "http://bioportal.bioontology.org/ontologies/GLYCO/?p=classes&conceptid=N-glycan&jump_to_nav=true" }, "subtype": { "name": "Complex", "url": "http://bioportal.bioontology.org/ontologies/GLYCO/?p=classes&conceptid=complex_N-glycan&jump_to_nav=true" } }, { "type": { "name": "N-linked", "url": "http://bioportal.bioontology.org/ontologies/GLYCO/?p=classes&conceptid=N-glycan&jump_to_nav=true" }, "subtype": { "name": "Core-fucosylated" } } ], "enzyme": [ { "uniprot_canonical_ac": "Q9H553-1", "protein_name": "Alpha-1,3/1,6-mannosyltransferase ALG2", "gene": "ALG2", "gene_link": "https://www.uniprot.org/uniprot/Q9H553", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q9DBE8-1", "protein_name": "Alpha-1,3/1,6-mannosyltransferase ALG2", "gene": "Alg2", "gene_link": "https://www.uniprot.org/uniprot/Q9DBE8", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "P27808-1", "protein_name": "Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase", "gene": "Mgat1", "gene_link": "https://www.uniprot.org/uniprot/P27808", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "P26572-1", "protein_name": "Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase", "gene": "MGAT1", "gene_link": "https://www.uniprot.org/uniprot/P26572", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q921V5-1", "protein_name": "Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase", "gene": "Mgat2", "gene_link": "https://www.uniprot.org/uniprot/Q921V5", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q10469-1", "protein_name": "Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase", "gene": "MGAT2", "gene_link": "https://www.uniprot.org/uniprot/Q10469", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q9H3H5-1", "protein_name": "UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase", "gene": "DPAGT1", "gene_link": "https://www.uniprot.org/uniprot/Q9H3H5", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "P42867-1", "protein_name": "UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase", "gene": "Dpagt1", "gene_link": "https://www.uniprot.org/uniprot/P42867", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q9NP73-1", "protein_name": "Putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13", "gene": "ALG13", "gene_link": "https://www.uniprot.org/uniprot/Q9NP73", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q9D8C3-1", "protein_name": "Putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13", "gene": "Alg13", "gene_link": "https://www.uniprot.org/uniprot/Q9D8C3", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q9D081-1", "protein_name": "UDP-N-acetylglucosamine transferase subunit ALG14 homolog", "gene": "Alg14", "gene_link": "https://www.uniprot.org/uniprot/Q9D081", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q96F25-1", "protein_name": "UDP-N-acetylglucosamine transferase subunit ALG14 homolog", "gene": "ALG14", "gene_link": "https://www.uniprot.org/uniprot/Q96F25", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q8BML3-1", "protein_name": "N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase", "gene": "Glt28d2", "gene_link": "https://www.uniprot.org/uniprot/Q8BML3", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q9BT22-1", "protein_name": "Chitobiosyldiphosphodolichol beta-mannosyltransferase", "gene": "ALG1", "gene_link": "https://www.uniprot.org/uniprot/Q9BT22", "tax_id": 9606, "tax_name": "Homo sapiens", "tax_common_name": "Human", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] }, { "uniprot_canonical_ac": "Q921Q3-1", "protein_name": "Chitobiosyldiphosphodolichol beta-mannosyltransferase", "gene": "Alg1", "gene_link": "https://www.uniprot.org/uniprot/Q921Q3", "tax_id": 10090, "tax_name": "Mus musculus", "tax_common_name": "Mouse", "evidence": [ { "id": "GLY_000284", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000284" } ] } ], "crossref": [ { "id": "G03196WF", "url": "https://glytoucan.org/Structures/Glycans/G03196WF", "database": "GlyTouCan" }, { "id": "G03196WF", "url": "https://glygen.ccrc.uga.edu/sandbox/explore.html?G03196WF", "database": "SandBox" }, { "id": "G03196WF", "url": "https://gnome.glyomics.org/restrictions/GlyGen.StructureBrowser.html?focus=G03196WF", "database": "GNOme" }, { "id": "G03196WF", "url": "https://glycosmos.org/glycans/show/G03196WF", "database": "GlyCosmos" } ], "glycoprotein": [], "publication": [], "residues": [ { "id": "N1", "name": "N-glycan_a-D-Manp_1", "attachedby": "rxn.Q9H553-1", "detachedby": "", "parentid": "NC" }, { "id": "N1", "name": "N-glycan_a-D-Manp_1", "attachedby": "rxn.Q9DBE8-1", "detachedby": "", "parentid": "NC" }, { "id": "N2", "name": "N-glycan_b-D-GlcpNAc_2", "attachedby": "rxn.P27808-1", "detachedby": "", "parentid": "N1" }, { "id": "N2", "name": "N-glycan_b-D-GlcpNAc_2", "attachedby": "rxn.P26572-1", "detachedby": "", "parentid": "N1" }, { "id": "N4", "name": "N-glycan_a-D-Manp_4", "attachedby": "rxn.Q9H553-1", "detachedby": "", "parentid": "NC" }, { "id": "N4", "name": "N-glycan_a-D-Manp_4", "attachedby": "rxn.Q9DBE8-1", "detachedby": "", "parentid": "NC" }, { "id": "N5", "name": "N-glycan_b-D-GlcpNAc_5", "attachedby": "rxn.Q921V5-1", "detachedby": "", "parentid": "N4" }, { "id": "N5", "name": "N-glycan_b-D-GlcpNAc_5", "attachedby": "rxn.Q10469-1", "detachedby": "", "parentid": "N4" }, { "id": "NA", "name": "N-glycan_core_D-GlcNAc_A", "attachedby": "rxn.Q9H3H5-1", "detachedby": "", "parentid": "0" }, { "id": "NA", "name": "N-glycan_core_D-GlcNAc_A", "attachedby": "rxn.P42867-1", "detachedby": "", "parentid": "0" }, { "id": "NB", "name": "N-glycan_core_b-D-GlcpNAc_B", "attachedby": "rxn.Q9NP73-1", "detachedby": "", "parentid": "NA" }, { "id": "NB", "name": "N-glycan_core_b-D-GlcpNAc_B", "attachedby": "rxn.Q9D8C3-1", "detachedby": "", "parentid": "NA" }, { "id": "NB", "name": "N-glycan_core_b-D-GlcpNAc_B", "attachedby": "rxn.Q9D081-1", "detachedby": "", "parentid": "NA" }, { "id": "NB", "name": "N-glycan_core_b-D-GlcpNAc_B", "attachedby": "rxn.Q96F25-1", "detachedby": "", "parentid": "NA" }, { "id": "NB", "name": "N-glycan_core_b-D-GlcpNAc_B", "attachedby": "rxn.Q8BML3-1", "detachedby": "", "parentid": "NA" }, { "id": "NC", "name": "N-glycan_core_b-D-Manp_C", "attachedby": "rxn.Q9BT22-1", "detachedby": "", "parentid": "NB" }, { "id": "NC", "name": "N-glycan_core_b-D-Manp_C", "attachedby": "rxn.Q921Q3-1", "detachedby": "", "parentid": "NB" } ], "composition": [ { "name": "6-Deoxy-Hexose", "residue": "dhex", "count": 1, "cid": "840", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/840" }, { "name": "Hexose", "residue": "hex", "count": 6, "cid": "206", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/206" }, { "name": "N-Acetylhexosamine", "residue": "hexnac", "count": 5, "cid": "899", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/899" }, { "name": "Hexuronic Acid", "residue": "hexa", "count": 0, "cid": "610", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/610" }, { "name": "2-Amino-2-Deoxy-Hexose", "residue": "hexn", "count": 0, "cid": "739", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/739" }, { "name": "N-Acetyl-Neuraminic Acid", "residue": "neuac", "count": 2, "cid": "439197", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/439197" }, { "name": "N-Glycolyl-Neuraminic Acid", "residue": "neugc", "count": 0, "cid": "440001", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/440001" }, { "name": "Phosphate", "residue": "p", "count": 0, "cid": "1061", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/1061" }, { "name": "Pentose", "residue": "pent", "count": 0, "cid": "229", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/229" }, { "name": "Sulfate", "residue": "s", "count": 0, "cid": "1117", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/1117" }, { "name": "Other", "residue": "other", "count": 0 } ], "composition_expanded": [ { "name": "Alditol", "residue": "aldi", "count": 0 }, { "name": "6-Deoxy-Hexose", "residue": "dhex", "count": 1, "cid": "840", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/840" }, { "name": "6-Deoxy-Hexitol", "residue": "dhex+aldi", "count": 0 }, { "name": "L-Fucose", "residue": "fuc", "count": 1, "cid": "17106", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/17106" }, { "name": "L-Fucitol", "residue": "fuc+aldi", "count": 0, "cid": "445724", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/445724" }, { "name": "D-Galactose", "residue": "gal", "count": 2, "cid": "6036", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/6036" }, { "name": "D-Galacitol", "residue": "gal+aldi", "count": 0, "cid": "11850", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/11850" }, { "name": "D-Galactosamine", "residue": "galn", "count": 0, "cid": "24154", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/24154" }, { "name": "N-Acetyl-D-galactosamine", "residue": "galnac", "count": 0, "cid": "35717", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/35717" }, { "name": "N-Acetylgalactosaminitol", "residue": "galnac+aldi", "count": 0, "cid": "165880", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/165880" }, { "name": "D-Glucose", "residue": "glc", "count": 0, "cid": "5793", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/5793" }, { "name": "D-Glucitol", "residue": "glc+aldi", "count": 0, "cid": "5780", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/5780" }, { "name": "D-Glucuronic acid", "residue": "glca", "count": 0, "cid": "94715", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/94715" }, { "name": "D-Glucosamine", "residue": "glcn", "count": 0, "cid": "439213", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/439213" }, { "name": "N-Acetyl-D-Glucosamine", "residue": "glcnac", "count": 4, "cid": "439174", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/439174" }, { "name": "N-Acetyl-D-glucosaminitol", "residue": "glcnac+aldi", "count": 0, "cid": "165206", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/165206" }, { "name": "Hexose", "residue": "hex", "count": 6, "cid": "206", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/206" }, { "name": "N-Acetylhexosamine", "residue": "hexnac", "count": 5, "cid": "899", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/899" }, { "name": "Hexuronic Acid", "residue": "hexa", "count": 0, "cid": "610", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/610" }, { "name": "2-Amino-2-Deoxy-Hexose", "residue": "hexn", "count": 0, "cid": "739", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/739" }, { "name": "Hexitol", "residue": "hex+aldi", "count": 0, "cid": "453", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/453" }, { "name": "N-Acetylhexosaminitol", "residue": "hexnac+aldi", "count": 0 }, { "name": "L-Iduronic acid", "residue": "idoa", "count": 0, "cid": "441039", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/441039" }, { "name": "D-Mannose", "residue": "man", "count": 3, "cid": "18950", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/18950" }, { "name": "D-Mannitol", "residue": "man+aldi", "count": 0, "cid": "6251", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/6251" }, { "name": "D-Mannosamine", "residue": "mann", "count": 0, "cid": "440049", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/440049" }, { "name": "N-Acetyl-D-mannosamine", "residue": "mannac", "count": 0, "cid": "439281", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/439281" }, { "name": "Methyl", "residue": "me", "count": 0 }, { "name": "N-Acetyl-Neuraminic Acid", "residue": "neuac", "count": 2, "cid": "439197", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/439197" }, { "name": "N-Glycolyl-Neuraminic Acid", "residue": "neugc", "count": 0, "cid": "440001", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/440001" }, { "name": "Phosphate", "residue": "p", "count": 0, "cid": "1061", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/1061" }, { "name": "Pentose", "residue": "pent", "count": 0, "cid": "229", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/229" }, { "name": "Sulfate", "residue": "s", "count": 0, "cid": "1117", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/1117" }, { "name": "Sialic acid", "residue": "sia", "count": 2, "cid": "906", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/906" }, { "name": "Other", "residue": "other", "count": 0 }, { "name": "Floating substituent", "residue": "x", "count": 0 }, { "name": "D-Xylose", "residue": "xyl", "count": 0, "cid": "135191", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/135191" }, { "name": "Ketodeoxynononic acid", "residue": "kdn", "count": 0, "cid": "13991616", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/13991616" } ], "motifs": [], "interactions": [], "expression": [], "subsumption": [ { "related_accession": "G01077MO", "relationship": "ancestor" }, { "related_accession": "G11629QQ", "relationship": "ancestor" }, { "related_accession": "G23028IO", "relationship": "ancestor" }, { "related_accession": "G25569EP", "relationship": "ancestor" }, { "related_accession": "G49917IO", "relationship": "ancestor" }, { "related_accession": "G57776ZS", "relationship": "ancestor" }, { "related_accession": "G59699IB", "relationship": "ancestor" }, { "related_accession": "G66708DB", "relationship": "ancestor" }, { "related_accession": "G85144OK", "relationship": "ancestor" }, { "related_accession": "G25569EP", "relationship": "basecomposition" }, { "related_accession": "G23028IO", "relationship": "composition" }, { "related_accession": "G64076LG", "relationship": "descendant" }, { "related_accession": "G64076LG", "relationship": "leaf" }, { "related_accession": "G01077MO", "relationship": "subsumedby" }, { "related_accession": "G49917IO", "relationship": "subsumedby" }, { "related_accession": "G64076LG", "relationship": "subsumes" } ], "names": [], "keywords": [], "glycotree_pathways": [], "dictionary": {} }