{ "bcoid": "GLY_000813", "title": "Fruitfly UniProtKB xref GlyConnect", "description": "Fruitfly UniProtKB xref GlyConnect dataset contains fruitfly(taxid: 7227) UniProtKB canonical accessions ...", "filename": "fruitfly_protein_xref_glyconnect.csv", "filetype": "csv", "categories": { "species": [ "Drosophila melanogaster" ], "molecule": [ "Protein" ], "tag": [ "GlyConnect Cross-references" ], "file_type": [ "csv" ], "status": [ "Reviewed" ], "scope": [ "internal" ] }, "minitable": { "content": [ [ "Q9VLB2-1...", "protein_xref..." ], [ "Q9VLB2-1...", "protein_xref..." ] ], "headers": [ "uniprotkb_ca...", "xref_key..." ], "colwidth": [ "40%", "20%" ] }, "sampledata": { "type": "table", "data": [ [ { "type": "string", "label": "uniprotkb_canonical_ac" }, { "type": "string", "label": "xref_key" }, { "type": "string", "label": "xref_id" }, { "type": "string", "label": "xref_label" } ], [ "Q9VLB2-1", "protein_xref_glyconnect", "415", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "416", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "856", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "11", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "1443", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "1642", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "1713", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "3247", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "3485", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9559", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9560", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9585", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9595", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9616", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9618", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9621", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9622", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9625", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9634", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9657", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9662", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9664", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9665", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9667", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9670", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9678", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9703", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "1043", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9707", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9708", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9709", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9711", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9712", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9730", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9753", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9757", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9767", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9772", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9775", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9783", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "3276", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9822", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9830", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9834", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9864", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9872", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "1879", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "2007", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9584", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "2472", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "678", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9912", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "1947", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "2305", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9631", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "1786", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9685", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9710", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9748", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9756", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "1822", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9831", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "2039", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "1089", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9886", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9888", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9914", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "3318", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "2056", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9619", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9687", "" ], [ "Q9VLB2-1", "protein_xref_glyconnect", "9913", "" ] ] }, "readme": "Name\n - Fruitfly UniProtKB xref GlyConnect\n\nVersion\n - v-2.2.1\n\nCreated on\n - 2023-03-03T03:58:28.936Z\n\nModified on\n - 2023-09-11T21:27:31\n\nCreated by\n - Jeet Vora [jeetvora@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Jingyue Wu [jingyue.wu@email.gwu.edu], Jingyue Wu [jingyue.wu@email.gwu.edu]\n\nAuthors\n - \n\nChecksum\n - \n\nUsability Domain\n - Fruitfly UniProtKB xref GlyConnect dataset contains fruitfly(taxid: 7227) UniProtKB canonical accessions mapped to the GlyConnect IDs.\n\nDescription Domain\n Keywords\n - Xref\n - GlyConnect\n\n Pipeline Steps\n - Step-1: The script maps the UniProtKB accesions to the Glyconnect Database IDs\n\nExecution Domain\n Scripts - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-protein-dataset.py\n\n\n Software Prerequisites\n Name: Python\n Version: 2.7.5\n URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n Input Subdomain\n Name: fruitfly_proteoform_glycosylation_sites_glyconnect.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.2.1/reviewed/fruitfly_proteoform_glycosylation_sites_glyconnect.csv\n Output Subdomain\n Name: fruitfly_protein_xref_glyconnect.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.2.1/reviewed/fruitfly_protein_xref_glyconnect.csv\n Name: fruitfly_protein_xref_glyconnect.stat.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.2.1/reviewed/fruitfly_protein_xref_glyconnect.stat.csv\n\nFields\n Name: \"uniprotkb_canonical_ac\"\n Description: \"\"\n Unique Values: \"1\"\n Name: \"xref_key\"\n Description: \"Source key associated to the xref_id\"\n Unique Values: \"1\"\n Name: \"xref_id\"\n Description: \"ID of the X-ref\"\n Unique Values: \"72\"\n Name: \"xref_label\"\n Description: \"Label/Name associated with x-ref\"\n Unique Values: \"1\"", "downloadurl": "/ln2data/releases/data/v-2.2.1/reviewed/fruitfly_protein_xref_glyconnect.csv" }