{
    "bcoid": "GLY_000679",
    "title": "Fruitfly Proteoform Phosphorylation Citations (UniProtKB)",
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                "Journal of proteome research",
                "2008 Apr",
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                "protein_xref_pubmed",
                "18327897",
                "protein_xref_uniprotkb",
                "Q9W3C1"
            ],
            [
                "Q9W420-1",
                "Phosphoproteome analysis of Drosophila melanogaster embryos.",
                "Journal of proteome research",
                "2008 Apr",
                "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP",
                "protein_xref_pubmed",
                "18327897",
                "protein_xref_uniprotkb",
                "Q9W420"
            ],
            [
                "Q9VVV9-1",
                "Phosphoproteome analysis of Drosophila melanogaster embryos.",
                "Journal of proteome research",
                "2008 Apr",
                "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP",
                "protein_xref_pubmed",
                "18327897",
                "protein_xref_uniprotkb",
                "Q9VVV9"
            ],
            [
                "Q961D9-1",
                "Phosphoproteome analysis of Drosophila melanogaster embryos.",
                "Journal of proteome research",
                "2008 Apr",
                "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP",
                "protein_xref_pubmed",
                "18327897",
                "protein_xref_uniprotkb",
                "Q961D9"
            ],
            [
                "Q9VC45-1",
                "Phosphoproteome analysis of Drosophila melanogaster embryos.",
                "Journal of proteome research",
                "2008 Apr",
                "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP",
                "protein_xref_pubmed",
                "18327897",
                "protein_xref_uniprotkb",
                "Q9VC45"
            ],
            [
                "Q24558-1",
                "Phosphoproteome analysis of Drosophila melanogaster embryos.",
                "Journal of proteome research",
                "2008 Apr",
                "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP",
                "protein_xref_pubmed",
                "18327897",
                "protein_xref_uniprotkb",
                "Q24558"
            ],
            [
                "Q9V4F9-1",
                "Phosphoproteome analysis of Drosophila melanogaster embryos.",
                "Journal of proteome research",
                "2008 Apr",
                "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP",
                "protein_xref_pubmed",
                "18327897",
                "protein_xref_uniprotkb",
                "Q9V4F9"
            ],
            [
                "Q9VW47-1",
                "Phosphoproteome analysis of Drosophila melanogaster embryos.",
                "Journal of proteome research",
                "2008 Apr",
                "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP",
                "protein_xref_pubmed",
                "18327897",
                "protein_xref_uniprotkb",
                "Q9VW47"
            ],
            [
                "Q9VZZ9-1",
                "An integrated chemical, mass spectrometric and computational strategy for (quantitative) phosphoproteomics: application to Drosophila melanogaster Kc167 cells.",
                "Molecular bioSystems",
                "2007 Apr",
                "Bodenmiller B, Mueller LN, Pedrioli PG, Pflieger D, Junger MA, Eng JK, Aebersold R, Tao WA",
                "protein_xref_pubmed",
                "17372656",
                "protein_xref_uniprotkb",
                "Q9VZZ9"
            ],
            [
                "Q94517-1",
                "Phosphoproteome analysis of Drosophila melanogaster embryos.",
                "Journal of proteome research",
                "2008 Apr",
                "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP",
                "protein_xref_pubmed",
                "18327897",
                "protein_xref_uniprotkb",
                "Q94517"
            ],
            [
                "Q9VIS1-1",
                "Phosphoproteome analysis of Drosophila melanogaster embryos.",
                "Journal of proteome research",
                "2008 Apr",
                "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP",
                "protein_xref_pubmed",
                "18327897",
                "protein_xref_uniprotkb",
                "Q9VIS1"
            ],
            [
                "A1A708-1",
                "Phosphoproteome analysis of Drosophila melanogaster embryos.",
                "Journal of proteome research",
                "2008 Apr",
                "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP",
                "protein_xref_pubmed",
                "18327897",
                "protein_xref_uniprotkb",
                "A1A708"
            ],
            [
                "Q8IRW8-1",
                "Phosphoproteome analysis of Drosophila melanogaster embryos.",
                "Journal of proteome research",
                "2008 Apr",
                "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP",
                "protein_xref_pubmed",
                "18327897",
                "protein_xref_uniprotkb",
                "Q8IRW8"
            ],
            [
                "Q9VZI3-1",
                "Phosphoproteome analysis of Drosophila melanogaster embryos.",
                "Journal of proteome research",
                "2008 Apr",
                "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP",
                "protein_xref_pubmed",
                "18327897",
                "protein_xref_uniprotkb",
                "Q9VZI3"
            ],
            [
                "Q9V9S7-1",
                "Phosphoproteome analysis of Drosophila melanogaster embryos.",
                "Journal of proteome research",
                "2008 Apr",
                "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP",
                "protein_xref_pubmed",
                "18327897",
                "protein_xref_uniprotkb",
                "Q9V9S7"
            ],
            [
                "Q9U969-1",
                "Phosphoproteome analysis of Drosophila melanogaster embryos.",
                "Journal of proteome research",
                "2008 Apr",
                "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP",
                "protein_xref_pubmed",
                "18327897",
                "protein_xref_uniprotkb",
                "Q9U969"
            ],
            [
                "Q9VWD4-1",
                "Phosphoproteome analysis of Drosophila melanogaster embryos.",
                "Journal of proteome research",
                "2008 Apr",
                "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP",
                "protein_xref_pubmed",
                "18327897",
                "protein_xref_uniprotkb",
                "Q9VWD4"
            ],
            [
                "Q9VDW6-5",
                "Phosphoproteome analysis of Drosophila melanogaster embryos.",
                "Journal of proteome research",
                "2008 Apr",
                "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP",
                "protein_xref_pubmed",
                "18327897",
                "protein_xref_uniprotkb",
                "Q9VDW6"
            ],
            [
                "Q9VJQ4-1",
                "Phosphoproteome analysis of Drosophila melanogaster embryos.",
                "Journal of proteome research",
                "2008 Apr",
                "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP",
                "protein_xref_pubmed",
                "18327897",
                "protein_xref_uniprotkb",
                "Q9VJQ4"
            ],
            [
                "Q9NFU0-1",
                "Phosphoproteome analysis of Drosophila melanogaster embryos.",
                "Journal of proteome research",
                "2008 Apr",
                "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP",
                "protein_xref_pubmed",
                "18327897",
                "protein_xref_uniprotkb",
                "Q9NFU0"
            ],
            [
                "Q9NDM2-1",
                "Phosphoproteome analysis of Drosophila melanogaster embryos.",
                "Journal of proteome research",
                "2008 Apr",
                "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP",
                "protein_xref_pubmed",
                "18327897",
                "protein_xref_uniprotkb",
                "Q9NDM2"
            ],
            [
                "Q9VBP9-1",
                "Phosphoproteome analysis of Drosophila melanogaster embryos.",
                "Journal of proteome research",
                "2008 Apr",
                "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP",
                "protein_xref_pubmed",
                "18327897",
                "protein_xref_uniprotkb",
                "Q9VBP9"
            ],
            [
                "Q9VBP9-1",
                "An integrated chemical, mass spectrometric and computational strategy for (quantitative) phosphoproteomics: application to Drosophila melanogaster Kc167 cells.",
                "Molecular bioSystems",
                "2007 Apr",
                "Bodenmiller B, Mueller LN, Pedrioli PG, Pflieger D, Junger MA, Eng JK, Aebersold R, Tao WA",
                "protein_xref_pubmed",
                "17372656",
                "protein_xref_uniprotkb",
                "Q9VBP9"
            ],
            [
                "Q9VYA7-1",
                "Phosphoproteome analysis of Drosophila melanogaster embryos.",
                "Journal of proteome research",
                "2008 Apr",
                "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP",
                "protein_xref_pubmed",
                "18327897",
                "protein_xref_uniprotkb",
                "Q9VYA7"
            ],
            [
                "Q9VMA3-1",
                "Phosphoproteome analysis of Drosophila melanogaster embryos.",
                "Journal of proteome research",
                "2008 Apr",
                "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP",
                "protein_xref_pubmed",
                "18327897",
                "protein_xref_uniprotkb",
                "Q9VMA3"
            ],
            [
                "Q9XYU1-1",
                "Phosphoproteome analysis of Drosophila melanogaster embryos.",
                "Journal of proteome research",
                "2008 Apr",
                "Zhai B, Villen J, Beausoleil SA, Mintseris J, Gygi SP",
                "protein_xref_pubmed",
                "18327897",
                "protein_xref_uniprotkb",
                "Q9XYU1"
            ]
        ]
    },
    "readme": "Name\n   - Fruitfly Proteoform Phosphorylation Citations (UniProtKB)\n\nVersion\n   - v-2.2.1\n\nCreated on\n  - 2022-09-02T13:32:35.505543\n\nModified on\n   - 2023-03-14T17:12:29.696Z\n\nCreated by\n   -  [jeetvora@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Jingyue Wu [jingyue.wu@email.gwu.edu]\n\nAuthors\n   - \n\nChecksum\n   - \n\nDescription Domain\n   Keywords\n   - publications\n   - PMID\n   - journal\n   - citations\n   - authors\n   - UniProtKB\n   - PubMed\n   - Phosphorylation\n\n   Pipeline Steps\n   - Step-1: The script parses the input file for PMIDs and accesses the NCBI Entrez infrastructure to download the publication information of the corresponding PMIDs\n\nExecution Domain\n   Scripts   - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-proteoform-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: fruitfly_proteoform_phosphorylation_sites_uniprotkb.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.2.1/reviewed/fruitfly_proteoform_phosphorylation_sites_uniprotkb.csv\n   Output Subdomain\n      Name: fruitfly_proteoform_citations_phosphorylation_sites_uniprotkb.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.2.1/reviewed/fruitfly_proteoform_citations_phosphorylation_sites_uniprotkb.csv\n      Name: fruitfly_proteoform_citations_phosphorylation_sites_uniprotkb.stat.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.2.1/reviewed/fruitfly_proteoform_citations_phosphorylation_sites_uniprotkb.stat.csv\n\nFields\n      Name: \"uniprotkb_canonical_ac\"\n     Description: \"\"\n      Unique Values: \"732\"\n      Name: \"title\"\n     Description: \"Title of the published article in the journal\"\n      Unique Values: \"43\"\n      Name: \"journal_name\"\n     Description: \"The name of the journal in which the article is published\"\n      Unique Values: \"24\"\n      Name: \"publication_date\"\n     Description: \"Contains the full date on which the issue of the journal was published. Sourced from MEDLINE/PubMed data element(fields) description.\"\n      Unique Values: \"43\"\n      Name: \"authors\"\n     Description: \"NA\"\n      Unique Values: \"43\"\n      Name: \"xref_key\"\n     Description: \"Source key associated to the  xref_id\"\n      Unique Values: \"1\"\n      Name: \"xref_id\"\n     Description: \"ID of the X-ref\"\n      Unique Values: \"43\"\n      Name: \"src_xref_key\"\n     Description: \"Source Xref  key\"\n      Unique Values: \"1\"\n      Name: \"src_xref_id\"\n     Description: \"Source X-ref ID\"\n      Unique Values: \"732\"",
    "downloadurl": "/ln2data/releases/data/v-2.2.1/reviewed/fruitfly_proteoform_citations_phosphorylation_sites_uniprotkb.csv"
}