{ "bcoid": "GLY_000590", "title": "Mouse Reaction Participants (Reactome)", "description": "", "filename": "mouse_protein_participants_reactome.csv", "filetype": "csv", "categories": { "species": [ "Mus musculus" ], "molecule": [ "Protein" ], "tag": [ "Reaction Participants (Reactome)" ], "file_type": [ "csv" ], "status": [ "Reviewed" ], "scope": [ "internal" ] }, "minitable": { "content": [ [ "R-MMU-681374...", "R-ALL-679949..." ], [ "R-MMU-681374...", "R-ALL-679949..." ] ], "headers": [ "reaction_id...", "participant_..." ], "colwidth": [ "40%", "20%" ] }, "sampledata": { "type": "table", "data": [ [ { "type": "string", "label": "reaction_id" }, { "type": "string", "label": "participant_id" }, { "type": "string", "label": "participant_name" }, { "type": "string", "label": "role" }, { "type": "string", "label": "xref_id" }, { "type": "string", "label": "xref_type" } ], [ "R-MMU-6813749", "R-ALL-6799497", "DGA [cytosol]", "output", "16659", "ChEBI" ], [ "R-MMU-6813749", 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"SMARCA5 [nucleoplasm]", "input", "Q91ZW3", "PRO" ], [ "R-MMU-5250947", "R-MMU-417153", "Baz1b [nucleoplasm]", "input", "NP_035844.2", "RefSeq" ] ] }, "readme": "Name\n - Mouse Reaction Participants (Reactome)\n\nVersion\n - v-2.2.1\n\nCreated on\n - 2021-10-07T14:15:48.605914\n\nModified on\n - 2022-09-26T09:08:12.733442\n\nCreated by\n - [jeetvora@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Jingyue Wu [jingyue.wu@email.gwu.edu]\n\nAuthors\n - \n\nChecksum\n - \n\nExecution Domain\n Scripts\n\n Software Prerequisites\n Name: Python\n Version: 2.7.5\n URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n Input Subdomain\n Name: database_accession.tsv\n URI: https:/data.glygen.org/ln2downloads/chebi/2023_10_11/database_accession.tsv\n Name: uniprot-proteome-mus-musculus.nt\n URI: https:/data.glygen.org/ln2downloads/ebi/2023_10_30/uniprot-proteome-mus-musculus.nt\n Output Subdomain\n Name: mouse_protein_participants_reactome.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.2.1/reviewed/mouse_protein_participants_reactome.csv\n Name: mouse_protein_participants_reactome.stat.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.2.1/reviewed/mouse_protein_participants_reactome.stat.csv\n\nFields\n Name: \"reaction_id\"\n Description: \"The identifier assigned to a reaction in Reactome database\"\n Unique Values: \"7103\"\n Name: \"participant_id\"\n Description: \"\"\n Unique Values: \"7092\"\n Name: \"participant_name\"\n Description: \"\"\n Unique Values: \"3853\"\n Name: \"role\"\n Description: \"\"\n Unique Values: \"3\"\n Name: \"xref_id\"\n Description: \"ID of the X-ref\"\n Unique Values: \"15253\"\n Name: \"xref_type\"\n Description: \"\"\n Unique Values: \"45\"", "downloadurl": "/ln2data/releases/data/v-2.2.1/reviewed/mouse_protein_participants_reactome.csv" }