{ "bcoid": "GLY_000256", "title": "Human Protein Citations (RefSeq)", "description": "The Human Protein Citations (RefSeq) datasets contains human [taxid:9606] UniProtKB accessions mapped ...", "filename": "human_protein_citations_refseq.csv", "filetype": "csv", "categories": { "species": [ "Homo sapiens" ], "molecule": [ "Protein" ], "tag": [ "Protein Citations" ], "file_type": [ "csv" ], "status": [ "Reviewed" ], "scope": [ "internal" ] }, "minitable": { "content": [ [ "P0C7P3-1...", "SLFN14 mutat..." ], [ "Q8N7H5-1...", "SUMO Modific..." ] ], "headers": [ "uniprotkb_ca...", "title..." ], "colwidth": [ "40%", "20%" ] }, "sampledata": { "type": "table", "data": [ [ { "type": "string", "label": "uniprotkb_canonical_ac" }, { "type": "string", "label": "title" }, { "type": "string", "label": "journal_name" }, { "type": "string", "label": "publication_date" }, { "type": "string", "label": "authors" }, { "type": "string", "label": "xref_key" }, { "type": "string", "label": "xref_id" }, { "type": "string", "label": "src_xref_key" }, { "type": "string", "label": "src_xref_id" } ], [ "P0C7P3-1", "SLFN14 mutations underlie thrombocytopenia with excessive bleeding and platelet secretion defects.", "The Journal of clinical investigation", "2015 Sep", "Fletcher SJ, Johnson B, Lowe GC, Bem D, Drake S, Lordkipanidze M, Guiu IS, Dawood B, Rivera J, Simpson MA, Daly ME, Motwani J, Collins PW, Watson SP, Morgan NV", "protein_xref_pubmed", "26280575", "protein_xref_refseq", "NP_001123292" ], [ "Q8N7H5-1", "SUMO Modification of PAF1/PD2 Enables PML Interaction and Promotes Radiation Resistance in Pancreatic Ductal Adenocarcinoma.", "Molecular and cellular biology", "2021 Nov 22", "Rauth S, Karmakar S, Shah A, Seshacharyulu P, Nimmakayala RK, Ganguly K, Bhatia R, Muniyan S, Kumar S, Dutta S, Lin C, Datta K, Batra SK, Ponnusamy MP", "protein_xref_pubmed", "34570619", "protein_xref_refseq", "NP_001243755" ], [ "Q9BVV6-1", "The CP110-interacting proteins Talpid3 and Cep290 play overlapping and distinct roles in cilia assembly.", "The Journal of cell biology", "2014 Jan 20", "Kobayashi T, Kim S, Lin YC, Inoue T, Dynlacht BD", "protein_xref_pubmed", "24421332", "protein_xref_refseq", "NP_001231118" ], [ "P14672-1", "Microtubule-mediated GLUT4 trafficking is disrupted in insulin resistant skeletal muscle.", "eLife", "2023-04-19", "Knudsen Jonas R, Persson Kaspar W, Henriquez-Olguin Carlos, Li Zhencheng, Di Leo Nicolas, Hesselager Sofie A, Raun Steffen H, Hingst Janne R, Trouillon Rapha\u00ebl, Wohlwend Martin, Wojtaszewski J\u00f8rgen F P, Gijs Martin A M, Jensen Thomas Elbenhardt", "protein_xref_pubmed", "37073948", "protein_xref_refseq", "NP_001033" ], [ "A8TX70-1", "RNAseq-Based Prioritization Revealed COL6A5, COL8A1, COL10A1 and MIR146A as Common and Differential Susceptibility Biomarkers for Psoriasis and Psoriatic Arthritis: Confirmation from Genotyping Analysis of 1417 Italian Subjects.", "International journal of molecular sciences", "2020 Apr 15", "Caputo V, Strafella C, Termine A, Campione E, Bianchi L, Novelli G, Giardina E, Cascella R", "protein_xref_pubmed", "32326527", "protein_xref_refseq", "NP_001265227" ], [ "O75953-3", "Critical role of zebrafish dnajb5 in myocardial proliferation and regeneration.", "Journal of genetics and genomics = Yi chuan xue bao", "2020 Aug", "Pang M, Xiong C, Xiao C, Du J, Zheng L, Bai L, Zhu X, Xiong JW", "protein_xref_pubmed", "33191150", "protein_xref_refseq", "NP_001128476" ], [ "Q12766-1", "Regulation of closely juxtaposed proto-oncogene c-fms and HMGXB3 gene expression by mRNA 3' end polymorphism in breast cancer cells.", "RNA (New York, N.Y.)", "2021 Sep", "Woo HH, Chambers SK", "protein_xref_pubmed", "34155128", "protein_xref_refseq", "NP_055798" ], [ "O60609-1", "Expression of GFRalpha3 correlates with tumor progression and promotes cell metastasis in urothelial carcinoma.", "Minerva urologica e nefrologica = The Italian journal of urology and nephrology", "2018 Feb", "Yan Y, Li MN, Yang B, Geng J, Zheng JH, Yao XD", "protein_xref_pubmed", "28651425", "protein_xref_refseq", "NP_001487" ], [ "Q92824-1", "Osteopontin as a novel substrate for the proprotein convertase 5/6 (PCSK5) in bone.", "Bone", "2018 Feb", "Hoac B, Susan-Resiga D, Essalmani R, Marcinkiweicz E, Seidah NG, McKee MD", "protein_xref_pubmed", "29126984", "protein_xref_refseq", "NP_001177411" ], [ "Q96L91-1", "TIP60/P400/H4K12ac Plays a Role as a Heterochromatin Back-up Skeleton in Breast Cancer.", "Cancer genomics & proteomics", "2020 Nov-Dec", "Idrissou M, Boisnier T, Sanchez A, Khoufaf FZH, Penault-Llorca F, Bignon YJ, Bernard-Gallon D", "protein_xref_pubmed", "33099470", "protein_xref_refseq", "NP_056224" ], [ "Q14978-1", "Nucleolar TRF2 attenuated nucleolus stress-induced HCC cell-cycle arrest by altering rRNA synthesis.", "Cell death & disease", "2018 May 1", "Yuan F, Xu C, Li G, Tong T", "protein_xref_pubmed", "29725012", "protein_xref_refseq", "NP_001271317" ], [ "P60468-1", "Sec61beta facilitates the maintenance of endoplasmic reticulum homeostasis by associating microtubules.", "Protein & cell", "2018 Jul", "Zhu Y, Zhang G, Lin S, Shi J, Zhang H, Hu J", "protein_xref_pubmed", "29168059", "protein_xref_refseq", "NP_006799" ], [ "P14735-1", "Exploring the Structural Rearrangements of the Human Insulin-Degrading Enzyme through Molecular Dynamics Simulations.", "International journal of molecular sciences", "2022 Feb 3", "Ghoula M, Janel N, Camproux AC, Moroy G", "protein_xref_pubmed", "35163673", "protein_xref_refseq", "NP_001159418" ], [ "O00327-2", "Bmal1 and Gut-lung axis in SARS-CoV-2 infection: New insight into the effects of melatonin on COVID-19 patients?", "Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie", "2023-01-23", "Khezri Mohammad Rafi, Varzandeh Reza, Ghasemnejad-Berenji Morteza", "protein_xref_pubmed", "37257225", "protein_xref_refseq", "NP_001025443" ], [ "P10809-1", "Ectopic CH60 mediates HAPLN1-induced cell survival signaling in multiple myeloma.", "Life science alliance", "2023-03", "De Bakshi Debayan, Chen Yu-Chia, Wuerzberger-Davis Shelly M, Ma Min, Waters Bayley J, Li Lingjun, Suzuki Aussie, Miyamoto Shigeki", "protein_xref_pubmed", "36625202", "protein_xref_refseq", "NP_002147" ], [ "Q8WXX7-1", "Structural polymorphism driven by a register shift in a CGAG-rich region found in the promoter of the neurodevelopmental regulator AUTS2 gene.", "Nucleic acids research", "2023-04-11", "Novotn\u00fd Ale\u0161, Plavec Janez, Kocman Voj\u010d", "protein_xref_pubmed", "36864756", "protein_xref_refseq", "NP_001120703" ], [ "P13473-1", "[Clinical characteristics of Danon disease].", "Zhonghua xin xue guan bing za zhi", "2023-01-24", "Wang W W, Zhu Y Y, Wu W, Zhao D C, Lin X, Fang L G, Zhang S Y", "protein_xref_pubmed", "36655242", "protein_xref_refseq", "NP_001116078" ], [ "P28290-1", "Deregulated expression of KRAP, a novel gene encoding actin-interacting protein, in human colon cancer cells.", "Journal of human genetics", "2004", "Inokuchi J, Komiya M, Baba I, Naito S, Sasazuki T, Shirasawa S", "protein_xref_pubmed", "14673706", "protein_xref_refseq", "NP_001274432" ], [ "P33681-1", "Cryptic association of B7-2 molecules and its implication for clustering.", "Protein science : a publication of the Protein Society", "2021 Sep", "Lankipalli S, H S MS, Selvam D, Samanta D, Nair D, Ramagopal UA", "protein_xref_pubmed", "34191384", "protein_xref_refseq", "NP_005182" ], [ "Q99956-1", "Expression of Dual-Specificity Phosphatase 9 in Placenta and Its Relationship with Gestational Diabetes Mellitus.", "Journal of diabetes research", "2019", "Wei Q, Pu X, Zhang L, Xu Y, Duan M, Wang Y", "protein_xref_pubmed", "31772940", "protein_xref_refseq", "NP_001305432" ], [ "Q9H267-1", "Comparative evolutionary analysis of VPS33 homologues: genetic and functional insights.", "Human molecular genetics", "2005 May 15", "Gissen P, Johnson CA, Gentle D, Hurst LD, Doherty AJ, O'Kane CJ, Kelly DA, Maher ER", "protein_xref_pubmed", "15790593", "protein_xref_refseq", "NP_001276077" ], [ "P15884-1", "Protein stabilization of ITF2 by NF-\u03baB prevents colitis-associated cancer development.", "Nature communications", "2023-04-25", "Lee Mingyu, Kim Yi-Sook, Lim Suha, Shin Seung-Hyun, Kim Iljin, Kim Jiyoung, Choi Min, Kim Jung Ho, Koh Seong-Joon, Park Jong-Wan, Shin Hyun-Woo", "protein_xref_pubmed", "37185280", "protein_xref_refseq", "NP_001230155" ], [ "P58062-1", "ECRG2, a novel candidate of tumor suppressor gene in the esophageal carcinoma, interacts directly with metallothionein 2A and links to apoptosis.", "Biochemical and biophysical research communications", "2003 Mar 21", "Cui Y, Wang J, Zhang X, Lang R, Bi M, Guo L, Lu SH", "protein_xref_pubmed", "12646258", "protein_xref_refseq", "NP_115955" ], [ "Q3KP66-1", "C1orf106 is a colitis risk gene that regulates stability of epithelial adherens junctions.", "Science (New York, N.Y.)", "2018 Mar 9", "Mohanan V, Nakata T, Desch AN, Levesque C, Boroughs A, Guzman G, Cao Z, Creasey E, Yao J, Boucher G, Charron G, Bhan AK, Schenone M, Carr SA, Reinecker HC, Daly MJ, Rioux JD, Lassen KG, Xavier RJ", "protein_xref_pubmed", "29420262", "protein_xref_refseq", "NP_060735" ], [ "Q9NR71-1", "Neutral ceramidase: Advances in mechanisms, cell regulation, and roles in cancer.", "Advances in biological regulation", "2019 Jan", "Coant N, Hannun YA", "protein_xref_pubmed", "30389354", "protein_xref_refseq", "NP_001137446" ], [ "Q86XP3-1", "[The DEAD box RNA helicase DDX42 is an intrinsic inhibitor of positive-strand RNA viruses].", "Medecine sciences : M/S", "2023-04", "Bonaventure Boris, Goujon Caroline", "protein_xref_pubmed", "37094262", "protein_xref_refseq", "NP_031398" ], [ "Q96K19-1", "Bi-allelic variants in RNF170 are associated with hereditary spastic paraplegia.", "Nature communications", "2019 Oct 21", "Wagner M, Osborn DPS, Gehweiler I, Nagel M, Ulmer U, Bakhtiari S, Amouri R, Boostani R, Hentati F, Hockley MM, Holbling B, Schwarzmayr T, Karimiani EG, Kernstock C, Maroofian R, Muller-Felber W, Ozkan E, Padilla-Lopez S, Reich S, Reichbauer J, Darvish H, Shahmohammadibeni N, Tafakhori A, Vill K, Zuchner S, Kruer MC, Winkelmann J, Jamshidi Y, Schule R", "protein_xref_pubmed", "31636353", "protein_xref_refseq", "NP_001153695" ], [ "Q8N3E9-1", "CircMAP3K4 protects human lens epithelial cells from H2O2-induced dysfunction by targeting miR-193a-3p/PLCD3 axis in age-related cataract.", "Cell cycle (Georgetown, Tex.)", "2022-09-07", "Ma Yu, Liu Yi, Shu Baotong, Yang Jianguo, Lv Liang, Zhou Lixiao, Wang Lichun, Shi Zongli", "protein_xref_pubmed", "36071682", "protein_xref_refseq", "NP_588614" ], [ "Q9NSV4-3", "Diaph3 underlines tumor cell heterogeneity in glioblastoma with implications for treatment modalities resistance.", "Journal of neuro-oncology", "2022 May", "Stoyanov GS, Lyutfi E, Georgieva R, Georgiev R, Dzhenkov D, Petkova L, Ivanov BD, Kaprelyan A, Ghenev P", "protein_xref_pubmed", "35380294", "protein_xref_refseq", "NP_001035982" ], [ "Q9NWH9-1", "Circular RNA SLTM as a miR-421-competing endogenous RNA to mediate HMGB2 expression stimulates apoptosis and inflammation in arthritic chondrocytes.", "Journal of biochemical and molecular toxicology", "2023-03-19", "Zhang Hua, Xiang XiaoBing, Zhou BenGen, Chen JianFa, Sun YouQiang, Zhang ShuangXiao, Li AiHua, Li Jie", "protein_xref_pubmed", "36935520", "protein_xref_refseq", "NP_001013865" ], [ "Q15437-1", "New Cases and Mutations in SEC23B Gene Causing Congenital Dyserythropoietic Anemia Type II.", "International journal of molecular sciences", "2023-06-09", "Musri Melina Mara, Venturi Veronica, Ferrer-Cort\u00e8s X\u00e8nia, Romero-Cortadellas L\u00eddia, Hern\u00e1ndez Gonzalo, Leoz Pilar, Ricard Andr\u00e9s Mar\u00eda Pilar, Morado Marta, Fern\u00e1ndez Valle Mar\u00eda Del Carmen, Beneitez Pastor David, Ortu\u00f1o Cabrero Ana, Moreno Gamiz Maite, Senent Peris Leonor, Perez-Valencia Amanda Isabel, P\u00e9rez-Montero Santiago, Tornador Cristian, S\u00e1nchez Mayka", "protein_xref_pubmed", "37373084", "protein_xref_refseq", "NP_001166217" ], [ "Q9UGU0-1", "Variants in TCF20 in neurodevelopmental disability: description of 27 new patients and review of literature.", "Genetics in medicine : official journal of the American College of Medical Genetics", "2019 Sep", "Torti E, Keren B, Palmer EE, Zhu Z, Afenjar A, Anderson IJ, Andrews MV, Atkinson C, Au M, Berry SA, Bowling KM, Boyle J, Buratti J, Cathey SS, Charles P, Cogne B, Courtin T, Escobar LF, Finley SL, Graham JM Jr, Grange DK, Heron D, Hewson S, Hiatt SM, Hibbs KA, Jayakar P, Kalsner L, Larcher L, Lesca G, Mark PR, Miller K, Nava C, Nizon M, Pai GS, Pappas J, Parsons G, Payne K, Putoux A, Rabin R, Sabatier I, Shinawi M, Shur N, Skinner SA, Valence S, Warren H, Whalen S, Crunk A, Douglas G, Monaghan KG, Person RE, Willaert R, Solomon BD, Juusola J", "protein_xref_pubmed", "30739909", "protein_xref_refseq", "NP_005641" ], [ "Q6UQ28-1", "Identification of Plet-1 as a specific marker of early thymic epithelial progenitor cells.", "Proceedings of the National Academy of Sciences of the United States of America", "2008 Jan 22", "Depreter MG, Blair NF, Gaskell TL, Nowell CS, Davern K, Pagliocca A, Stenhouse FH, Farley AM, Fraser A, Vrana J, Robertson K, Morahan G, Tomlinson SR, Blackburn CC", "protein_xref_pubmed", "18195351", "protein_xref_refseq", "NP_001138496" ], [ "Q9C0G0-1", "Gene-centric association signals for lipids and apolipoproteins identified via the HumanCVD BeadChip.", "American journal of human genetics", "2009 Nov", "Talmud PJ, Drenos F, Shah S, Shah T, Palmen J, Verzilli C, Gaunt TR, Pallas J, Lovering R, Li K, Casas JP, Sofat R, Kumari M, Rodriguez S, Johnson T, Newhouse SJ, Dominiczak A, Samani NJ, Caulfield M, Sever P, Stanton A, Shields DC, Padmanabhan S, Melander O, Hastie C, Delles C, Ebrahim S, Marmot MG, Smith GD, Lawlor DA, Munroe PB, Day IN, Kivimaki M, Whittaker J, Humphries SE, Hingorani AD", "protein_xref_pubmed", "19913121", "protein_xref_refseq", "NP_001139661" ], [ "Q8NI99-1", "Angiopoietin-related growth factor (AGF) supports adhesion, spreading, and migration of keratinocytes, fibroblasts, and endothelial cells through interaction with RGD-binding integrins.", "Biochemical and biophysical research communications", "2006 Aug 18", "Zhang Y, Hu X, Tian R, Wei W, Hu W, Chen X, Han W, Chen H, Gong Y", "protein_xref_pubmed", "16806062", "protein_xref_refseq", "NP_001308340" ], [ "Q04727-1", "Polymorphisms of TGFB1, TLE4 and MUC22 are associated with childhood asthma in Chinese population.", "Allergologia et immunopathologia", "2017 Sep - Oct", "Chen JB, Zhang J, Hu HZ, Xue M, Jin YJ", "protein_xref_pubmed", "28262390", "protein_xref_refseq", "NP_001269677" ], [ "Q8NG31-1", "Characterization of the MLL partner gene AF15q14 involved in t(11;15)(q23;q14).", "Oncogene", "2003 Mar 6", "Kuefer MU, Chinwalla V, Zeleznik-Le NJ, Behm FG, Naeve CW, Rakestraw KM, Mukatira ST, Raimondi SC, Morris SW", "protein_xref_pubmed", "12618768", "protein_xref_refseq", "NP_653091" ], [ "Q96P63-1", "Deciphering the three-domain architecture in schlafens and the structures and roles of human schlafen12 and serpinB12 in transcriptional regulation.", "Journal of molecular graphics & modelling", "2019 Jul", "Chen J, Kuhn LA", "protein_xref_pubmed", "31026779", "protein_xref_refseq", "NP_001294857" ], [ "Q9H7M9-1", "Targeting STAT3-VISTA axis to suppress tumor aggression and burden in acute myeloid leukemia.", "Journal of hematology & oncology", "2023-02-27", "Mo Jianshan, Deng Lin, Peng Keren, Ouyang Shumin, Ding Wen, Lou Linlin, Lin Ziyou, Zhu Jianzheng, Li Jingwei, Zhang Qiyi, Wang Pengyan, Wen Yuanzhen, Chen Xiaobing, Yue Peibin, Lu Jin-Jian, Zhu Kai, Zheng Yongjiang, Wang Yuanxiang, Zhang Xiaolei", "protein_xref_pubmed", "36849939", "protein_xref_refseq", "NP_071436" ], [ "Q92786-1", "Prox1 is differentially localized during lens development.", "Mechanisms of development", "2002 Mar", "Duncan MK, Cui W, Oh DJ, Tomarev SI", "protein_xref_pubmed", "11850194", "protein_xref_refseq", "NP_001257545" ], [ "Q9UPG8-1", "Amplification of the PLAG-family genes-PLAGL1 and PLAGL2-is\u00a0a key feature of the novel tumor type CNS embryonal tumor with PLAGL amplification.", "Acta neuropathologica", "2023-01", "Keck Michaela-Kristina, Sill Martin, Wittmann Andrea, Joshi Piyush, Stichel Damian, Beck Pengbo, Okonechnikow Konstantin, Sievers Philipp, Wefers Annika K, Roncaroli Federico, Avula Shivaram, McCabe Martin G, Hayden James T, Wesseling Pieter, \u00d8ra Ingrid, Nist\u00e9r Monica, Kranendonk Mari\u00ebtte E G, Tops Bastiaan B J, Zapotocky Michal, Zamecnik Josef, Vasiljevic Alexandre, Fenouil Tanguy, Meyronet David, von Hoff Katja, Sch\u00fcller Ulrich, Loiseau Hugues, Figarella-Branger Dominique, Kramm Christof M, Sturm Dominik, Scheie David, Rauramaa Tuomas, Pesola Jouni, Gojo Johannes, Haberler Christine, Brandner Sebastian, Jacques Tom, Sexton Oates Alexandra, Saffery Richard, Koscielniak Ewa, Baker Suzanne J, Yip Stephen, Snuderl Matija, Ud Din Nasir, Samuel David, Schramm Kathrin, Blattner-Johnson Mirjam, Selt Florian, Ecker Jonas, Milde Till, von Deimling Andreas, Korshunov Andrey, Perry Arie, Pfister Stefan M, Sahm Felix, Solomon David A, Jones David T W", "protein_xref_pubmed", "36437415", "protein_xref_refseq", "NP_002648" ], [ "P25874-1", "Increased uncoupling protein 1 levels are associated with attention deficit and hyperactivity disorder in medication-free children.", "Journal of psychiatric research", "2022-12", "Esad Tezcan Mustafa, U\u00e7ar Halit Necmi, Vatansev H\u00fcsamettin", "protein_xref_pubmed", "36327766", "protein_xref_refseq", "NP_068605" ], [ "O76050-1", "Fe65 negatively regulates Jagged1 signaling by decreasing Jagged1 protein stability through the E3 ligase Neuralized-like 1.", "Biochimica et biophysica acta", "2015 Nov", "Lee HJ, Yoon JH, Ahn JS, Jo EH, Kim MY, Lee YC, Kim JW, Ann EJ, Park HS", "protein_xref_pubmed", "26276215", "protein_xref_refseq", "NP_004201" ], [ "Q8WVC0-1", "LEO1 is a partner for Cockayne syndrome protein B (CSB) in response to transcription-blocking DNA damage.", "Nucleic acids research", "2021 Jun 21", "Tiwari V, Kulikowicz T, Wilson DM 3rd, Bohr VA", "protein_xref_pubmed", "34096589", "protein_xref_refseq", "NP_001273359" ], [ "Q9BV35-1", "Cellular expression and alternative splicing of SLC25A23, a member of the mitochondrial Ca2+-dependent solute carrier gene family.", "Gene", "2005 Jan 31", "Bassi MT, Manzoni M, Bresciani R, Pizzo MT, Della Monica A, Barlati S, Monti E, Borsani G", "protein_xref_pubmed", "15716113", "protein_xref_refseq", "NP_077008" ], [ "Q86YT5-1", "Human Na+ -coupled citrate transporter: primary structure, genomic organization, and transport function.", "Biochemical and biophysical research communications", "2002 Dec 6", "Inoue K, Zhuang L, Ganapathy V", "protein_xref_pubmed", "12445824", "protein_xref_refseq", "NP_001137310" ], [ "Q8N335-1", "A novel mutation in GPD1L associated with early repolarization syndrome via modulation of cardiomyocyte fast sodium currents.", "International journal of molecular medicine", "2020 Mar", "Fan J, Ji CC, Cheng YJ, Yao H, Chen XM, Zheng ZH, Wu SH", "protein_xref_pubmed", "31922248", "protein_xref_refseq", "NP_055956" ], [ "A1XBS5-1", "The Tumor-promoting Effects of FAM92A1-289 in Cervical Carcinoma Cells.", "Anticancer research", "2016 Oct", "Gui H, Guo XR, Fang J, Ma SN, Wu G, Shen JH, Tu HJ, Li DS, Dai LJ, Ruan XZ", "protein_xref_pubmed", "27798880", "protein_xref_refseq", "NP_001269963" ], [ "P52952-1", "Disease-associated non-coding variants alter NKX2-5 DNA-binding affinity.", "Biochimica et biophysica acta. Gene regulatory mechanisms", "2023-03", "Pe\u00f1a-Mart\u00ednez Edwin G, Rivera-Madera Alejandro, Pomales-Matos Diego A, Sanabria-Alberto Leandro, Rosario-Ca\u00f1uelas Brittany M, Rodr\u00edguez-R\u00edos Jessica M, Carrasquillo-Dones Emanuel A, Rodr\u00edguez-Mart\u00ednez Jos\u00e9 A", "protein_xref_pubmed", "36690178", "protein_xref_refseq", "NP_001159647" ], [ "Q9UK53-1", "miR-24-3p promotes colon cancer progression by targeting ING1.", "Signal transduction and targeted therapy", "2020 Aug 25", "Gao Z, Zhou L, Hua S, Wu H, Luo L, Li L, Wang S, Liu Y, Zhou Z, Chen X", "protein_xref_pubmed", "32843621", "protein_xref_refseq", "NP_001254657" ], [ "Q86U44-1", "METTL3-mediated m6A modification of SIRT1 mRNA inhibits progression of endometriosis by cellular senescence enhancing.", "Journal of translational medicine", "2023-06-23", "Wang Xiaotong, Wang Jing, Zhao Xibo, Wu Han, Li Jixin, Cheng Yan, Guo Qiuyan, Cao Xuejiao, Liang Tian, Sun Liyuan, Zhang Guangmei", "protein_xref_pubmed", "37353804", "protein_xref_refseq", "NP_062826" ], [ "Q9HBJ8-1", "TMEM27 expression and clinical characteristics and survival in clear cell renal cell carcinoma.", "Acta oncologica (Stockholm, Sweden)", "2022-11-11", "Grewal Rickinder, Choung Hae Yoon G, Roberts Lisa L, Beane Timothy, Chen Luojing, Gilroy Daniel X, Rappold Phillip M, Le Thu H", "protein_xref_pubmed", "36369873", "protein_xref_refseq", "NP_065716" ], [ "Q5BKU9-1", "Genetic variants in nuclear-encoded mitochondrial genes influence AIDS progression.", "PloS one", "2010 Sep 21", "Hendrickson SL, Lautenberger JA, Chinn LW, Malasky M, Sezgin E, Kingsley LA, Goedert JJ, Kirk GD, Gomperts ED, Buchbinder SP, Troyer JL, O'Brien SJ", "protein_xref_pubmed", "20877624", "protein_xref_refseq", "NP_001291924" ], [ "A0PJK1-1", "Functional characterisation of human SGLT-5 as a novel kidney-specific sodium-dependent sugar transporter.", "FEBS letters", "2012 Feb 3", "Grempler R, Augustin R, Froehner S, Hildebrandt T, Simon E, Mark M, Eickelmann P", "protein_xref_pubmed", "22212718", "protein_xref_refseq", "NP_001035915" ], [ "Q96RG2-1", "Involvement of Per-Arnt-Sim (PAS) kinase in the stimulation of preproinsulin and pancreatic duodenum homeobox 1 gene expression by glucose.", "Proceedings of the National Academy of Sciences of the United States of America", "2004 Jun 1", "da Silva Xavier G, Rutter J, Rutter GA", "protein_xref_pubmed", "15148392", "protein_xref_refseq", "NP_001239048" ], [ "P23582-1", "A novel variant of NPPC causes abnormal post-translational cleavage: A candidate gene for premature ovarian insufficiency.", "Maturitas", "2022 Mar", "Park JY, Go M, Lyu SW, Yoon TK, Kang KM, Kim JW, Shim SH", "protein_xref_pubmed", "35120671", "protein_xref_refseq", "NP_077720" ], [ "Q8TDN7-1", "[Molecular evolution of neutral ceramidase: signalling molecule and virulence factor].", "Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme", "2002 Mar", "Ito M, Okino N, Tani M, Mitsutake S, Mori K", "protein_xref_pubmed", "11915342", "protein_xref_refseq", "NP_597999" ], [ "Q9NRF8-1", "Low cytosine triphosphate synthase 2 expression renders resistance to 5-fluorouracil in colorectal cancer.", "Cancer biology & therapy", "2011 Mar 15", "Tan WL, Bhattacharya B, Loh M, Balasubramanian I, Akram M, Dong D, Wong L, Thakkar B, Salto-Tellez M, Soo RA, Fichtner I, Iacopetta B, Soong R", "protein_xref_pubmed", "21378502", "protein_xref_refseq", "NP_001137474" ], [ "P25789-1", "Potentially functional genetic variants of VAV2 and PSMA4 in the immune-activation pathway and non-small cell lung cancer survival.", "The journal of gene medicine", "2022-10", "Bai Yushun, Zheng Ji, Cheng Lei, Liu Qi, Zhao Genming, Li Jingrao, Gu Yanzi, Xu Wanghong, Wang Mengyun, Wei Qingyi, Zhang Ruoxin", "protein_xref_pubmed", "36039727", "protein_xref_refseq", "NP_001096137" ], [ "O75807-1", "An upstream open reading frame regulates translation of GADD34 during cellular stresses that induce eIF2alpha phosphorylation.", "The Journal of biological chemistry", "2009 Mar 13", "Lee YY, Cevallos RC, Jan E", "protein_xref_pubmed", "19131336", "protein_xref_refseq", "NP_055145" ], [ "O95155-1", "The MPAC domain is a novel mitotically regulated domain, removed by apoptotic protease cleavage during cell death.", "Biochemical and biophysical research communications", "2006 Sep 8", "Spinette S, Mahoney JA, Rosen A", "protein_xref_pubmed", "16870146", "protein_xref_refseq", "NP_001099032" ], [ "Q49AH0-1", "Cerebral dopamine neurotrophic factor reduces alpha-synuclein aggregation and propagation and alleviates behavioral alterations in vivo.", "Molecular therapy : the journal of the American Society of Gene Therapy", "2021 Sep 1", "Albert K, Raymundo DP, Panhelainen A, Eesmaa A, Shvachiy L, Araujo GR, Chmielarz P, Yan X, Singh A, Cordeiro Y, Palhano FL, Foguel D, Luk KC, Domanskyi A, Voutilainen MH, Huttunen HJ, Outeiro TF, Saarma M, Almeida MS, Airavaara M", "protein_xref_pubmed", "33940158", "protein_xref_refseq", "NP_001025125" ], [ "Q9NQG6-1", "Human MIEF1 recruits Drp1 to mitochondrial outer membranes and promotes mitochondrial fusion rather than fission.", "The EMBO journal", "2011 Jun 24", "Zhao J, Liu T, Jin S, Wang X, Qu M, Uhlen P, Tomilin N, Shupliakov O, Lendahl U, Nister M", "protein_xref_pubmed", "21701560", "protein_xref_refseq", "NP_001291493" ], [ "Q9NNZ3-1", "New genetic associations detected in a host response study to hepatitis B vaccine.", "Genes and immunity", "2010 Apr", "Davila S, Froeling FE, Tan A, Bonnard C, Boland GJ, Snippe H, Hibberd ML, Seielstad M", "protein_xref_pubmed", "20237496", "protein_xref_refseq", "NP_001294909" ], [ "Q13972-1", "RASGRF1-rearranged Cutaneous Melanocytic Neoplasms With Spitzoid Cytomorphology: A Clinicopathologic and Genetic Study of 3 Cases.", "The American journal of surgical pathology", "2022 May 1", "Goto K, Pissaloux D, Fraitag S, Amini M, Vaucher R, Tirode F, de la Fouchardiere A", "protein_xref_pubmed", "34799483", "protein_xref_refseq", "NP_002882" ], [ "P12235-1", "Site-specific acetylation of adenine nucleotide translocase 1 at lysine 23 in human muscle.", "Analytical biochemistry", "2021 Oct 1", "Finlayson J, Barakati N, Langlais PR, Funk J, Zapata Bustos R, Coletta DK, Luo M, Willis WT, Mandarino LJ", "protein_xref_pubmed", "34332952", "protein_xref_refseq", "NP_001142" ], [ "Q5SW96-1", "Effects of familial hypercholesterolemia-associated genes on the phenotype of premature myocardial infarction.", "Lipids in health and disease", "2019 Apr 11", "Lee C, Cui Y, Song J, Li S, Zhang F, Wu M, Li L, Hu D, Chen H", "protein_xref_pubmed", "30971288", "protein_xref_refseq", "NP_056442" ], [ "Q14160-1", "Human scribble (Vartul) is targeted for ubiquitin-mediated degradation by the high-risk papillomavirus E6 proteins and the E6AP ubiquitin-protein ligase.", "Molecular and cellular biology", "2000 Nov", "Nakagawa S, Huibregtse JM", "protein_xref_pubmed", "11027293", "protein_xref_refseq", "NP_874365" ], [ "P20749-1", "PCAT1 induced by transcription factor YY1 promotes cholangiocarcinoma proliferation, migration and invasion by sponging miR-216a-3p to up-regulate oncogene BCL3.", "Biological chemistry", "2021 Jan 27", "Sun D, Zhao Y, Wang W, Guan C, Hu Z, Liu L, Jiang X", "protein_xref_pubmed", "33544468", "protein_xref_refseq", "NP_005169" ], [ "Q9H6U6-1", "Human BCAS3 expression in embryonic stem cells and vascular precursors suggests a role in human embryogenesis and tumor angiogenesis.", "PloS one", "2007 Nov 21", "Siva K, Venu P, Mahadevan A, S K S, Inamdar MS", "protein_xref_pubmed", "18030336", "protein_xref_refseq", "NP_001092902" ], [ "O43462-1", "MBTPS2, a membrane bound protease, underlying several distinct skin and bone disorders.", "Journal of translational medicine", "2021 Mar 20", "Caengprasath N, Theerapanon T, Porntaveetus T, Shotelersuk V", "protein_xref_pubmed", "33743732", "protein_xref_refseq", "NP_056968" ], [ "P62820-1", "Subcellular Distribution of BALF2 and the Role of Rab1 in the Formation of Epstein-Barr Virus Cytoplasmic Assembly Compartment and Virion Release.", "Microbiology spectrum", "2023-02-14", "Chao Tsung-Yu, Cheng Yi-Ying, Wang Zi-Yun, Fang Tien-Fang, Chang Yu-Ruei, Fuh Chi-Shane, Su Mei-Tzu, Su Yuan-Wei, Hsu Pang-Hung, Su Yu-Chen, Chang Yu-Ching, Lee Ting-Yau, Chou Wei-Han, Middeldorp Jaap M, Saraste Jaakko, Chen Mei-Ru", "protein_xref_pubmed", "36602343", "protein_xref_refseq", "NP_004152" ], [ "Q9BRD0-1", "A polygenic basis for four classical Fredrickson hyperlipoproteinemia phenotypes that are characterized by hypertriglyceridemia.", "Human molecular genetics", "2009 Nov 1", "Hegele RA, Ban MR, Hsueh N, Kennedy BA, Cao H, Zou GY, Anand S, Yusuf S, Huff MW, Wang J", "protein_xref_pubmed", "19656773", "protein_xref_refseq", "NP_001153208" ], [ "Q14541-1", "Hepatocyte nuclear factor 4 gamma (HNF4G) is correlated with poor prognosis and promotes tumor cell growth by inhibiting caspase-dependent intrinsic apoptosis in colorectal cancer.", "European journal of pharmacology", "2022 Feb 5", "Chen L, Shi H, Wang X, Wang T, Wang Y, Wu Z, Zhang W, Chen H, Zhong M, Mao X, Shi X, Li Q", "protein_xref_pubmed", "34965388", "protein_xref_refseq", "NP_001317490" ], [ "Q92520-1", "Transcriptional downregulation of FAM3C/ILEI in the Alzheimer's brain.", "Human molecular genetics", "2021 Dec 17", "Watanabe N, Nakano M, Mitsuishi Y, Hara N, Mano T, Iwata A, Murayama S, Suzuki T, Ikeuchi T, Nishimura M", "protein_xref_pubmed", "34378027", "protein_xref_refseq", "NP_001035109" ], [ "Q9Y6K1-1", "Loss of Dnmt3a impairs hematopoietic homeostasis and myeloid cell skewing via the PI3Kinase pathway.", "JCI insight", "2023-03-28", "Palam Lakshmi Reddy, Ramdas Baskar, Pickerell Katelyn M, Pasupuleti Santhosh Kumar, Kanumuri Rahul, Cesarano Annamaria, Szymanski Megan, Selman Bryce M, Dav\u00e9 Utpal P, Sandusky George, Perna Fabiana, Paczesny Sophie, Kapur Reuben", "protein_xref_pubmed", "36976647", "protein_xref_refseq", "NP_001307821" ], [ "Q16619-1", "Investigation of maternal serum cardiotrophin-1 concentrations in pregnant women with preeclampsia; a prospective case-control study.", "The journal of maternal-fetal & neonatal medicine : the official journal of the European Association of Perinatal Medicine, the Federation of Asia and Oceania Perinatal Societies, the International Society of Perinatal Obstetricians", "2023-12", "Kale \u0130brahim, Dizdar Merve", "protein_xref_pubmed", "37369375", "protein_xref_refseq", "NP_001136016" ], [ "Q9NQ30-1", "Endothelial cell-specific molecule 1 drives cervical cancer progression.", "Cell death & disease", "2022 Dec 15", "Lu J, Liu Q, Zhu L, Liu Y, Zhu X, Peng S, Chen M, Li P", "protein_xref_pubmed", "36522312", "protein_xref_refseq", "NP_001129076" ], [ "Q8WXC3-1", "NMR assignment of human ASC2, a self contained protein interaction domain involved in apoptosis and inflammation.", "Journal of biomolecular NMR", "2002 Jun", "Espejo F, Green M, Preece NE, Assa-Munt N", "protein_xref_pubmed", "12153040", "protein_xref_refseq", "NP_690865" ], [ "Q99467-1", "CD150 and CD180 are negative regulators of IL-10 expression and secretion in chronic lymphocytic leukemia B cells.", "Neoplasma", "2021 Jul", "Shcherbina V, Gordiienko I, Shlapatska L, Gluzman D, Sidorenko S", "protein_xref_pubmed", "33904315", "protein_xref_refseq", "NP_005573" ], [ "Q15233-1", "Non-POU Domain-Containing Octomer-Binding (NONO) protein expression and stability promotes the tumorigenicity and activation of Akt/MAPK/\u03b2-catenin pathways in human breast cancer cells.", "Cell communication and signaling : CCS", "2023-06-27", "Lone Bilal Ahmad, Siraj Fouzia, Sharma Ira, Verma Shweta, Karna Shibendra Kumar Lal, Ahmad Faiz, Nagar Preeti, Sachidanandan Chetana, Pokharel Yuba Raj", "protein_xref_pubmed", "37370134", "protein_xref_refseq", "NP_001138880" ], [ "P17516-1", "Polymorphisms in AKR1C4 and HSD3B2 and differences in serum DHEAS and progesterone are associated with paranoid ideation during mania or hypomania in bipolar disorder.", "European neuropsychopharmacology : the journal of the European College of Neuropsychopharmacology", "2012 Sep", "Johansson AG, Nikamo P, Schalling M, Landen M", "protein_xref_pubmed", "22356824", "protein_xref_refseq", "NP_001809" ], [ "P10827-1", "Regulation of the THRA gene, encoding the thyroid hormone nuclear receptor TR\u03b11, in intestinal lesions.", "Molecular oncology", "2022-12", "Giolito Maria Virginia, La Rosa Th\u00e9o, Farhat Diana, Bodoirat Serguei, Guardia Gabriela D A, Domon-Dell Claire, Galante Pedro A F, Freund Jean-Noel, Plateroti Michelina", "protein_xref_pubmed", "36217307", "protein_xref_refseq", "NP_001177847" ], [ "P14784-1", "Soluble IL-2R Levels at Baseline Predict the Development of Severe Respiratory Failure and Mortality in COVID-19 Patients.", "Viruses", "2022 Apr 10", "Gatselis NK, Lygoura V, Lyberopoulou A, Giannoulis G, Samakidou A, Vaiou A, Vatidis G, Antoniou K, Stefos A, Georgiadou S, Sagris D, Sveroni D, Stergioula D, Gabeta S, Ntaios G, Dalekos GN", "protein_xref_pubmed", "35458517", "protein_xref_refseq", "NP_000869" ] ] }, "readme": "Name\n - Human Protein Citations (RefSeq)\n\nVersion\n - v-2.2.1\n\nCreated on\n - 2019-09-06T14:06:38.983152\n\nModified on\n - 2022-09-26T09:04:47.995186\n\nCreated by\n - Jeet Vora [jeetvora@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Jingyue Wu [jingyue.wu@email.gwu.edu]\n\nAuthors\n - Not Applicable []\n\nChecksum\n - \n\nUsability Domain\n - The Human Protein Citations (RefSeq) datasets contains human [taxid:9606] UniProtKB accessions mapped to publication information (PMID, title, journal name, publication, date, authors of corresponding RefSeq accessions). The dataset is derived from NCBI RefSeq Release 96, September 9, 2019. If you use this dataset please provide proper attribution to NCBI RefSeq and GlyGen. \n\nDescription Domain\n Keywords\n - PMID\n - journal\n - citations\n - authors\n - RefSeq\n - PubMed\n\n Pipeline Steps\n - Step-1: The script parses the NCBI RefSeq gpff files to extract the publication information. The script also maps RefSeq accessions to the UniProtKB Canonical accessions. \n\nExecution Domain\n Scripts - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-protein-dataset.py\n\n\n Software Prerequisites\n Name: Python\n Version: 2.7.5\n URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n Input Subdomain\n Name: human_protein_blacklisted_pmids_uniprotkb.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.2.1/compiled/human_protein_blacklisted_pmids_uniprotkb.csv\n Name: human_protein_function_refseq.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.2.1/reviewed/human_protein_function_refseq.csv\n Output Subdomain\n Name: human_protein_citations_refseq.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.2.1/reviewed/human_protein_citations_refseq.csv\n Name: human_protein_citations_refseq.stat.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.2.1/reviewed/human_protein_citations_refseq.stat.csv\n\nFields\n Name: \"uniprotkb_canonical_ac\"\n Description: \"\"\n Unique Values: \"16073\"\n Name: \"title\"\n Description: \"Title of the published article in the journal\"\n Unique Values: \"58812\"\n Name: \"journal_name\"\n Description: \"The name of the journal in which the article is published\"\n Unique Values: \"2555\"\n Name: \"publication_date\"\n Description: \"Contains the full date on which the issue of the journal was published. Sourced from MEDLINE/PubMed data element(fields) description.\"\n Unique Values: \"6188\"\n Name: \"authors\"\n Description: \"NA\"\n Unique Values: \"58593\"\n Name: \"xref_key\"\n Description: \"Source key associated to the xref_id\"\n Unique Values: \"1\"\n Name: \"xref_id\"\n Description: \"ID of the X-ref\"\n Unique Values: \"58816\"\n Name: \"src_xref_key\"\n Description: \"Source Xref key\"\n Unique Values: \"1\"\n Name: \"src_xref_id\"\n Description: \"Source X-ref ID\"\n Unique Values: \"18098\"", "downloadurl": "/ln2data/releases/data/v-2.2.1/reviewed/human_protein_citations_refseq.csv" }