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"sequence_org": "G", "sequence_mut": "D", "comment": "In slac1-2; impaired anion transport activity, strong insensitivity to abscisic acid (ABA), altered CO(2)-dependent leaf temperature change and stomatal closure, reduced sensitivity to darkness, and defective regulation of transpiration in response to drought stress. Impaired anion transport activity; when associated with A-450.", "evidence": [ { "database": "UniProtKB", "id": "Q9LD83", "url": "https://www.uniprot.org/uniprotkb/Q9LD83" }, { "database": "PubMed", "id": "19955405", "url": "https://pubmed.ncbi.nlm.nih.gov/19955405" }, { "database": "PubMed", "id": "18305482", "url": "https://pubmed.ncbi.nlm.nih.gov/18305482" } ], "uniprot_canonical_ac": "Q9LD83-1" } ], "record_id": "pubmed.18305482", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { 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}, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Post-translational modifications of arabinogalactan-peptides of Arabidopsis thaliana. Endoplasmic reticulum and glycosylphosphatidylinositol-anchor signal cleavage sites and hydroxylation of proline.", "journal": "The Journal of biological chemistry", "date": "2004-10-29", "authors": "Schultz Carolyn J, Ferguson Kris L, Lahnstein Jelle, Bacic Antony", "reference": { "type": "PubMed", "id": "15322080", "url": "https://pubmed.ncbi.nlm.nih.gov/15322080" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q5PP12-1", "protein_name": "Arabinogalactan protein 24", "gene_name": "AGP24", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LYF6-1", "protein_name": "Arabinogalactan protein 15", "gene_name": "AGP15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O82337-1", "protein_name": "Arabinogalactan protein 16", "gene_name": "AGP16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L9T8-1", "protein_name": "Arabinogalactan protein 41", "gene_name": "AGP41", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LD43-1", "protein_name": "Arabinogalactan protein 40", "gene_name": "AGP40", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S2W4-1", "protein_name": "Arabinogalactan protein 23", "gene_name": "AGP23", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C8A4-1", "protein_name": "Arabinogalactan protein 21", "gene_name": "AGP21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FK16-1", "protein_name": "Arabinogalactan protein 22", "gene_name": "AGP22", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LJD9-1", "protein_name": "Arabinogalactan protein 12", "gene_name": "AGP12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M373-1", "protein_name": "Arabinogalactan protein 20", "gene_name": "AGP20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9STQ3-1", "protein_name": "Arabinogalactan protein 13", "gene_name": "AGP13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LVC0-1", "protein_name": "Arabinogalactan protein 14", "gene_name": "AGP14", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q5PP12", "url": "https://www.uniprot.org/uniprotkb/Q5PP12" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15322080", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 12 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Multilevel control of Arabidopsis 3-hydroxy-3-methylglutaryl coenzyme A reductase by protein phosphatase 2A.", "journal": "The Plant cell", "date": "2011-04", "authors": "Leivar Pablo, Antol\u00edn-Llovera Meritxell, Ferrero Sergi, Closa Marta, Arr\u00f3 Montserrat, Ferrer Albert, Boronat Albert, Campos Narciso", "reference": { "type": "PubMed", "id": "21478440", "url": "https://pubmed.ncbi.nlm.nih.gov/21478440" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q5QIT3-1", "protein_name": "Serine/threonine protein phosphatase 2A regulatory subunit B''beta", "gene_name": "B''BETA", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SLI8-1", "protein_name": "Probable serine/threonine protein phosphatase 2A regulatory subunit B''delta", "gene_name": "B''DELTA", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XGR4-1", "protein_name": "Serine/threonine protein phosphatase 2A regulatory subunit B''alpha", "gene_name": "B''ALPHA", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84JI6-1", "protein_name": "Probable serine/threonine protein phosphatase 2A regulatory subunit B''epsilon", "gene_name": "B''EPSILON", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P14891-1", "protein_name": "3-hydroxy-3-methylglutaryl-coenzyme A reductase 1", "gene_name": "HMG1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38845-1", "protein_name": "Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform", "gene_name": "PP2AA1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZQ4-1", "protein_name": "Probable serine/threonine protein phosphatase 2A regulatory subunit B''gamma", "gene_name": "B''GAMMA", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q5QIT3", "url": "https://www.uniprot.org/uniprotkb/Q5QIT3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.21478440", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 7 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Plasmodesmal-associated protein kinase in tobacco and Arabidopsis recognizes a subset of non-cell-autonomous proteins.", "journal": "Plant Cell", "date": "2005", "authors": "Lee Jung-Youn, Taoka Ken-ichiro, Yoo Byung-Chun, Ben-Nissan Gili, Kim Dong-Jin, Lucas William J", "reference": { "type": "PubMed", "id": "16126836", "url": "https://pubmed.ncbi.nlm.nih.gov/16126836" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q5XF24-1", "protein_name": "Casein kinase 1-like protein 13", "gene_name": "CKL13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZWB3-1", "protein_name": "Casein kinase 1-like protein 9", "gene_name": "CKL9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LW62-1", "protein_name": "Casein kinase 1-like protein 10", "gene_name": "CKL10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VYK9-1", "protein_name": "Casein kinase 1-like protein 12", "gene_name": "CKL12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CAI5-1", "protein_name": "Casein kinase 1-like protein 2", "gene_name": "CKL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FFH8-1", "protein_name": "Casein kinase 1-like protein 7", "gene_name": "CKL7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSX4-1", "protein_name": "Casein kinase 1-like protein 8", "gene_name": "CKL8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZUP4-1", "protein_name": "Casein kinase 1-like protein 5", "gene_name": "CKL5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LPJ1-1", "protein_name": "Casein kinase 1-like protein 6", "gene_name": "CKL6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93Z18-1", "protein_name": "Casein kinase 1-like protein 3", "gene_name": "CKL3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P42158-1", "protein_name": "Casein kinase 1-like protein 1", "gene_name": "CKL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LPI7-1", "protein_name": "Casein kinase 1-like protein 4", "gene_name": "CKL4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39050-1", "protein_name": "Casein kinase 1-like protein 11", "gene_name": "CKI1; CKL11", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q5XF24", "url": "https://www.uniprot.org/uniprotkb/Q5XF24" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16126836", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 13 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of unique SUN-interacting nuclear envelope proteins with diverse functions in plants.", "journal": "The Journal of cell biology", "date": "2014-06-09", "authors": "Zhou Xiao, Graumann Katja, Wirthmueller Lennart, Jones Jonathan D G, Meier Iris", "reference": { "type": "PubMed", "id": "24891605", "url": "https://pubmed.ncbi.nlm.nih.gov/24891605" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q5XVI1-1", "protein_name": "Protein SINE1", "gene_name": "SINE1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SW31-1", "protein_name": "Protein SINE4", "gene_name": "SINE4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SQR5-1", "protein_name": "Protein SINE2", "gene_name": "SINE2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FF75-1", "protein_name": "SUN domain-containing protein 1", "gene_name": "SUN1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C900-1", "protein_name": "Protein SINE3", "gene_name": "SINE3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SG79-1", "protein_name": "SUN domain-containing protein 2", "gene_name": "SUN2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q5XVI1", "url": "https://www.uniprot.org/uniprotkb/Q5XVI1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "mutagenesis": [ { "start_pos": 439, "end_pos": 439, "sequence_org": "H", "sequence_mut": "A", "comment": "Strongly affects binding to SINE1, SINE2, SINE3 and SINE4; when associated with F-443.", "evidence": [ { "database": "UniProtKB", "id": "Q9FF75", "url": "https://www.uniprot.org/uniprotkb/Q9FF75" }, { "database": "PubMed", "id": "24891605", "url": "https://pubmed.ncbi.nlm.nih.gov/24891605" } ], "uniprot_canonical_ac": "Q9FF75-1" }, { "start_pos": 443, "end_pos": 443, "sequence_org": "Y", "sequence_mut": "F", "comment": "Strongly affects binding to SINE1, SINE2, SINE3 and SINE4; when associated with A-439.", "evidence": [ { "database": "UniProtKB", "id": "Q9FF75", "url": "https://www.uniprot.org/uniprotkb/Q9FF75" }, { "database": "PubMed", "id": "24891605", "url": "https://pubmed.ncbi.nlm.nih.gov/24891605" } ], "uniprot_canonical_ac": "Q9FF75-1" }, { "start_pos": 434, "end_pos": 434, "sequence_org": "H", "sequence_mut": "A", "comment": "Strongly affects binding to SINE1, SINE2, SINE3 and SINE4; when associated with F-438.", "evidence": [ { "database": "UniProtKB", "id": "Q9SG79", "url": "https://www.uniprot.org/uniprotkb/Q9SG79" }, { "database": "PubMed", "id": "24891605", "url": "https://pubmed.ncbi.nlm.nih.gov/24891605" } ], "uniprot_canonical_ac": "Q9SG79-1" }, { "start_pos": 438, "end_pos": 438, "sequence_org": "Y", "sequence_mut": "F", "comment": "Strongly affects binding to SINE1, SINE2, SINE3 and SINE4; when associated with A-434.", "evidence": [ { "database": "UniProtKB", "id": "Q9SG79", "url": "https://www.uniprot.org/uniprotkb/Q9SG79" }, { "database": "PubMed", "id": "24891605", "url": "https://pubmed.ncbi.nlm.nih.gov/24891605" } ], "uniprot_canonical_ac": "Q9SG79-1" } ], "record_id": "pubmed.24891605", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The plant nuclear envelope as a multifunctional platform LINCed by SUN and KASH.", "journal": "J. Exp. Bot.", "date": "2015", "authors": "Zhou Xiao, Graumann Katja, Meier Iris", "reference": { "type": "PubMed", "id": "25740919", "url": "https://pubmed.ncbi.nlm.nih.gov/25740919" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q5XVI1-1", "protein_name": "Protein SINE1", "gene_name": "SINE1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A8MQR0-1", "protein_name": "WPP domain-interacting tail-anchored protein 2", "gene_name": "WIT2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JPE9-1", "protein_name": "SUN domain-containing protein 5", "gene_name": "SUN5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SW31-1", "protein_name": "Protein SINE4", "gene_name": "SINE4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94AV5-1", "protein_name": "WPP domain-interacting protein 3", "gene_name": "WIP3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SQR5-1", "protein_name": "Protein SINE2", "gene_name": "SINE2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GXA4-1", "protein_name": "WPP domain-interacting protein 1", "gene_name": "WIP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L7E5-1", "protein_name": "WPP domain-interacting tail-anchored protein 1", "gene_name": "WIT1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FH18-1", "protein_name": "WPP domain-interacting protein 2", "gene_name": "WIP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FF75-1", "protein_name": "SUN domain-containing protein 1", "gene_name": "SUN1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C900-1", "protein_name": "Protein SINE3", "gene_name": "SINE3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WPU1-1", "protein_name": "Myosin-15", "gene_name": "XI-I", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WSX8-1", "protein_name": "TIR domain-containing protein", "gene_name": "TIK", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4I8I0-1", "protein_name": "SUN domain-containing protein 4", "gene_name": "SUN4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4HRT5-1", "protein_name": "Protein CROWDED NUCLEI 1", "gene_name": "CRWN1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4I316-1", "protein_name": "SUN domain-containing protein 3", "gene_name": "SUN3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SG79-1", "protein_name": "SUN domain-containing protein 2", "gene_name": "SUN2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q5XVI1", "url": "https://www.uniprot.org/uniprotkb/Q5XVI1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.25740919", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Endoplasmic reticulum stress activates the expression of a sub-group of protein disulfide isomerase genes and AtbZIP60 modulates the response in Arabidopsis thaliana.", "journal": "Mol. Genet. Genomics", "date": "2008", "authors": "Lu Dong-Ping, Christopher David A", "reference": { "type": "PubMed", "id": "18574595", "url": "https://pubmed.ncbi.nlm.nih.gov/18574595" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q66GQ3-1", "protein_name": "Protein disulfide isomerase-like 1-6", "gene_name": "PDIL1-6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22263-1", "protein_name": "Protein disulfide-isomerase like 2-1", "gene_name": "PDIL2-1; UNE5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A3KPF5-1", "protein_name": "Protein disulfide isomerase-like 1-5", "gene_name": "PDIL1-5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FF55-1", "protein_name": "Protein disulfide isomerase-like 1-4", "gene_name": "PDIL1-4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T042-1", "protein_name": "Protein disulfide-isomerase 5-4", "gene_name": "PDIL5-4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VX13-1", "protein_name": "Protein disulfide isomerase-like 1-3", "gene_name": "PDIL1-3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O48773-1", "protein_name": "Protein disulfide-isomerase 2-3", "gene_name": "PDIL2-3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XI01-1", "protein_name": "Protein disulfide isomerase-like 1-1", "gene_name": "PDIL1-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94F09-1", "protein_name": "Protein disulfide-isomerase 5-2", "gene_name": "PDIL5-2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C7S0-1", "protein_name": "bZIP transcription factor 60", "gene_name": "BZIP60", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LJU2-1", "protein_name": "Protein disulfide-isomerase 5-3", "gene_name": "PDIL5-3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9MAU6-1", "protein_name": "Protein disulfide-isomerase like 2-2", "gene_name": "PDIL2-2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SRG3-1", "protein_name": "Protein disulfide isomerase-like 1-2", "gene_name": "PDIL1-2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q66GQ3", "url": "https://www.uniprot.org/uniprotkb/Q66GQ3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.18574595", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 13 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { 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Cell Sci.", "date": "2004", "authors": "Shibata Fukashi, Murata Minoru", "reference": { "type": "PubMed", "id": "15161939", "url": "https://pubmed.ncbi.nlm.nih.gov/15161939" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q66LG9-1", "protein_name": "Centromere protein C", "gene_name": "CENPC", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q66LG9", "url": "https://www.uniprot.org/uniprotkb/Q66LG9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15161939", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Characterization of a CENP-C homolog in Arabidopsis thaliana.", "journal": "Genes Genet. Syst.", "date": "2004", "authors": "Ogura Yutaka, Shibata Fukashi, Sato Hiroshi, Murata Minoru", "reference": { "type": "PubMed", "id": "15329494", "url": "https://pubmed.ncbi.nlm.nih.gov/15329494" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q66LG9-1", "protein_name": "Centromere protein C", "gene_name": "CENPC", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q66LG9", "url": "https://www.uniprot.org/uniprotkb/Q66LG9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15329494", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Adaptive evolution of centromere proteins in plants and animals.", "journal": "J. Biol.", "date": "2004", "authors": "Talbert PB, Bryson TD, Henikoff S", "reference": { "type": "PubMed", "id": "15345035", "url": "https://pubmed.ncbi.nlm.nih.gov/15345035" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q66LG9-1", "protein_name": "Centromere protein C", "gene_name": "CENPC", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q66LG9", "url": "https://www.uniprot.org/uniprotkb/Q66LG9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15345035", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arabidopsis MZT1 homologs GIP1 and GIP2 are essential for centromere architecture.", "journal": "Proc. Natl. Acad. Sci. U.S.A.", "date": "2015", "authors": "Batzenschlager Morgane, Lermontova Inna, Schubert Veit, Fuchs J\u00f6rg, Berr Alexandre, Koini Maria A, Houln\u00e9 Guy, Herzog Etienne, Rutten Twan, Alioua Abdelmalek, Fransz Paul, Schmit Anne-Catherine, Chabout\u00e9 Marie-Edith", "reference": { "type": "PubMed", "id": "26124146", "url": "https://pubmed.ncbi.nlm.nih.gov/26124146" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q66LG9-1", "protein_name": "Centromere protein C", "gene_name": "CENPC", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q66LG9", "url": "https://www.uniprot.org/uniprotkb/Q66LG9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.26124146", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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Dhalleine Tiphaine, P\u00e9geot Henri, Sudre Damien, Gualberto Jos\u00e9 M, Jacquot Jean-Pierre, Gaymard Fr\u00e9d\u00e9ric, Vignols Florence, Rouhier Nicolas", "reference": { "type": "PubMed", "id": "24203231", "url": "https://pubmed.ncbi.nlm.nih.gov/24203231" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q682I1-1", "protein_name": "Protein BOLA1, chloroplastic", "gene_name": "BOLA1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZPH2-1", "protein_name": "Monothiol glutaredoxin-S17", "gene_name": "GRXS17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GWS0-1", "protein_name": "Glutaredoxin-C5, chloroplastic", "gene_name": "GRXC5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84W65-1", "protein_name": "SufE-like protein 1, chloroplastic/mitochondrial", "gene_name": "SUFE1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84Y95-1", "protein_name": "Monothiol glutaredoxin-S14, chloroplastic", 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"table_stats": [ { "field": "total", "count": 9 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Putative roles of glutaredoxin-BolA holo-heterodimers in plants.", "journal": "Plant signaling & behavior", "date": "2014", "authors": "Dhalleine Tiphaine, Rouhier Nicolas, Couturier J\u00e9r\u00e9my", "reference": { "type": "PubMed", "id": "24714563", "url": "https://pubmed.ncbi.nlm.nih.gov/24714563" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q682I1-1", "protein_name": "Protein BOLA1, chloroplastic", "gene_name": "BOLA1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZPH2-1", "protein_name": "Monothiol glutaredoxin-S17", "gene_name": "GRXS17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84Y95-1", "protein_name": "Monothiol glutaredoxin-S14, chloroplastic", "gene_name": "GRXS14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8H7F6-1", "protein_name": "Bifunctional monothiol glutaredoxin-S16, chloroplastic", "gene_name": "GRXS16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FIC3-1", "protein_name": "Protein BOLA2", "gene_name": "BOLA2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q682I1", "url": "https://www.uniprot.org/uniprotkb/Q682I1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": 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"table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structural and spectroscopic insights into BolA-glutaredoxin complexes.", "journal": "J. Biol. Chem.", "date": "2014", "authors": "Roret Thomas, Tsan Pascale, Couturier J\u00e9r\u00e9my, Zhang Bo, Johnson Michael K, Rouhier Nicolas, Didierjean Claude", "reference": { "type": "PubMed", "id": "25012657", "url": "https://pubmed.ncbi.nlm.nih.gov/25012657" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q682I1-1", "protein_name": "Protein BOLA1, chloroplastic", "gene_name": "BOLA1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84W65-1", "protein_name": "SufE-like protein 1, chloroplastic/mitochondrial", "gene_name": "SUFE1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84Y95-1", "protein_name": "Monothiol glutaredoxin-S14, chloroplastic", "gene_name": "GRXS14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FIC3-1", "protein_name": "Protein BOLA2", "gene_name": "BOLA2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q682I1", "url": "https://www.uniprot.org/uniprotkb/Q682I1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.25012657", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "GAMETOPHYTE DEFECTIVE 1, a putative subunit of RNases P/MRP, is essential for female gametogenesis and male competence in Arabidopsis.", "journal": "PLoS ONE", "date": "2012", "authors": "Wang Si-Qi, Shi Dong-Qiao, Long Yan-Ping, Liu Jie, Yang Wei-Cai", "reference": { "type": "PubMed", "id": "22509260", "url": "https://pubmed.ncbi.nlm.nih.gov/22509260" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q6AWV1-1", "protein_name": "Probable ribonuclease P/MRP protein subunit POP5", "gene_name": "EMB1687", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JXF1-1", "protein_name": "Protein GAMETOPHYTE DEFECTIVE 1", "gene_name": "GAF1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q6AWV1", "url": "https://www.uniprot.org/uniprotkb/Q6AWV1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], 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"sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Pectin RG-I rhamnosyltransferases represent a novel plant-specific glycosyltransferase family.", "journal": "Nature plants", "date": "2018-09", "authors": "Takenaka Yuto, Kato Kohei, Ogawa-Ohnishi Mari, Tsuruhama Kana, Kajiura Hiroyuki, Yagyu Kenta, Takeda Atsushi, Takeda Yoichi, Kunieda Tadashi, Hara-Nishimura Ikuko, Kuroha Takeshi, Nishitani Kazuhiko, Matsubayashi Yoshikatsu, Ishimizu Takeshi", "reference": { "type": "PubMed", "id": "30082766", "url": "https://pubmed.ncbi.nlm.nih.gov/30082766" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q6E279-1", "protein_name": "Rhamnogalacturonan I rhamnosyltransferase 4", "gene_name": "RRT3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93ZR8-1", "protein_name": "Rhamnogalacturonan I rhamnosyltransferase 1", "gene_name": "RRT2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6NQ51-1", "protein_name": "Rhamnogalacturonan I rhamnosyltransferase 1", "gene_name": "RRT4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q4V398-1", "protein_name": "Rhamnogalacturonan I rhamnosyltransferase 1", "gene_name": "RRT1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q6E279", "url": "https://www.uniprot.org/uniprotkb/Q6E279" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.30082766", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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Exp. Bot.", "date": "2012", "authors": "Montesinos Juan Carlos, Sturm Silke, Langhans Markus, Hillmer Stefan, Marcote Mar\u00eda Jes\u00fas, Robinson David G, Aniento Fernando", "reference": { "type": "PubMed", "id": "22577184", "url": "https://pubmed.ncbi.nlm.nih.gov/22577184" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q6IDL4-1", "protein_name": "Transmembrane emp24 domain-containing protein p24delta3", "gene_name": "F14J9.28", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J4Y0-1", "protein_name": "Transmembrane emp24 domain-containing protein p24delta6", "gene_name": "T7M13.14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LIL4-1", "protein_name": "Transmembrane emp24 domain-containing protein p24beta3", "gene_name": "MWI23.22", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LJV9-1", "protein_name": "Transmembrane emp24 domain-containing protein p24delta11", "gene_name": "MRI12.5", "tax_name": "Mouse-ear 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"uniprot_canonical_ac": "Q9C9F6-1", "protein_name": "Putative two-component response regulator-like APRR6", "gene_name": "APRR6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L500-1", "protein_name": "Two-component response regulator-like APRR9", "gene_name": "APRR9; PRR9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93WK5-1", "protein_name": "Two-component response regulator-like APRR7", "gene_name": "APRR7; PRR7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6LA42-1", "protein_name": "Two-component response regulator-like APRR5", "gene_name": "APRR5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LVG4-1", "protein_name": "Two-component response regulator-like APRR3", "gene_name": "APRR3; PRR3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FJ16-1", "protein_name": "Putative two-component response regulator-like APRR4", "gene_name": "APRR4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LKL2-1", "protein_name": "Two-component response regulator-like APRR1", "gene_name": "APRR1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q6LA43", "url": "https://www.uniprot.org/uniprotkb/Q6LA43" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.10945350", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 9 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { 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"total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { 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Identification of two classes with putative functions in redox homeostasis in Arabidopsis thaliana.", "journal": "The Journal of biological chemistry", "date": "2002-08-23", "authors": "Dixon David P, Davis Benjamin G, Edwards Robert", "reference": { "type": "PubMed", "id": "12077129", "url": "https://pubmed.ncbi.nlm.nih.gov/12077129" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q6NLB0-1", "protein_name": "Glutathione S-transferase L1", "gene_name": "GSTL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M2W2-1", "protein_name": "Glutathione S-transferase L2, chloroplastic", "gene_name": "GSTL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LE52-1", "protein_name": "Glutathione S-transferase DHAR3, chloroplastic", "gene_name": "DHAR3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FWR4-1", "protein_name": "Glutathione S-transferase DHAR1, mitochondrial", "gene_name": "DHAR1", "tax_name": "Mouse-ear 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"sequence_org": "C", "sequence_mut": "S", "comment": "Reduced activity by 50 percent.", "evidence": [ { "database": "UniProtKB", "id": "Q9FWR4", "url": "https://www.uniprot.org/uniprotkb/Q9FWR4" }, { "database": "PubMed", "id": "12077129", "url": "https://pubmed.ncbi.nlm.nih.gov/12077129" } ], "uniprot_canonical_ac": "Q9FWR4-1" } ], "record_id": "pubmed.12077129", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A role for LORELEI, a putative glycosylphosphatidylinositol-anchored protein, in Arabidopsis thaliana double fertilization and early seed development.", "journal": "Plant J.", "date": "2010", "authors": "Tsukamoto Tatsuya, Qin Yuan, Huang Yiding, Dunatunga Damayanthi, Palanivelu Ravishankar", "reference": { "type": "PubMed", "id": "20163554", "url": "https://pubmed.ncbi.nlm.nih.gov/20163554" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q6NLF4-1", "protein_name": "GPI-anchored protein LLG2", "gene_name": "LLG2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FKT1-1", "protein_name": "GPI-anchored protein LLG1", "gene_name": "LLG1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M0I0-1", "protein_name": "GPI-anchored protein LLG3", "gene_name": "LLG3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "B3GS44-1", "protein_name": "GPI-anchored protein LORELEI", "gene_name": "LRE", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q6NLF4", "url": "https://www.uniprot.org/uniprotkb/Q6NLF4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.20163554", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Specific targeting of a plasmodesmal protein affecting cell-to-cell communication.", "journal": "PLoS Biol.", "date": "2008", "authors": "Thomas Carole L, Bayer Emmanuelle M, Ritzenthaler Christophe, Fernandez-Calvino Lourdes, Maule Andrew J", "reference": { "type": "PubMed", "id": "18215111", "url": "https://pubmed.ncbi.nlm.nih.gov/18215111" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q6NM73-1", "protein_name": "Plasmodesmata-located protein 2", "gene_name": "PDLP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZU94-1", "protein_name": "Plasmodesmata-located protein 6", "gene_name": "PDLP6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22784-1", "protein_name": "Plasmodesmata-located protein 3", "gene_name": "PDLP3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GXV7-1", "protein_name": "Plasmodesmata-located protein 1", "gene_name": "PDLP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GUJ2-1", "protein_name": "Plasmodesmata-located protein 5", "gene_name": "PDLP5", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q6NM73", "url": "https://www.uniprot.org/uniprotkb/Q6NM73" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "mutagenesis": [ { "start_pos": 287, "end_pos": 287, "sequence_org": "L", "sequence_mut": "A", "comment": "No effect on targeting to plasmodesma.", "evidence": [ { "database": "UniProtKB", "id": "Q8GXV7", "url": "https://www.uniprot.org/uniprotkb/Q8GXV7" }, { "database": "PubMed", "id": "18215111", "url": "https://pubmed.ncbi.nlm.nih.gov/18215111" } ], 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"total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 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}, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Uncovering the molecular signature underlying the light intensity-dependent root development in Arabidopsis thaliana.", "journal": "BMC genomics", "date": "2019-07-20", "authors": "Kumari Sony, Yadav Sandeep, Patra Debadutta, Singh 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Biol.", "date": "2009", "authors": "Cain Peter, Hall Michael, Schr\u00f6der Wolfgang P, Kieselbach Thomas, Robinson Colin", "reference": { "type": "PubMed", "id": "19259774", "url": "https://pubmed.ncbi.nlm.nih.gov/19259774" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q6NPF9-1", "protein_name": "Thioredoxin Y1, chloroplastic", "gene_name": "F28O16.13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LD49-1", "protein_name": "Thioredoxin X, chloroplastic", "gene_name": "ATHX", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LEK4-1", "protein_name": "Thioredoxin-like 2-1, chloroplastic", "gene_name": "F20B18.270", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZT6-1", "protein_name": "Thioredoxin-like 3-2, chloroplastic", "gene_name": "WCRKC2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SGS4-1", "protein_name": "Thioredoxin-like protein CDSP32, chloroplastic", "gene_name": "CDSP32", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XFH8-1", "protein_name": "Thioredoxin F1, chloroplastic", "gene_name": "F13E7.33", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L7S9-1", "protein_name": "Thioredoxin Y2, chloroplastic", "gene_name": "T10P12.4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O48737-1", "protein_name": "Thioredoxin M1, chloroplastic", "gene_name": "F21B7.28; F21B7_7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XFH9-1", "protein_name": "Thioredoxin F2, chloroplastic", "gene_name": "MQK4.13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FG36-1", "protein_name": "Thioredoxin-like 3-1, chloroplastic", "gene_name": "WCRKC1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SEU7-1", "protein_name": "Thioredoxin M3, chloroplastic", "gene_name": "ATHM3; GAT1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SEU8-1", "protein_name": "Thioredoxin M2, chloroplastic", "gene_name": "ATHM2; TRXM2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SEU6-1", "protein_name": "Thioredoxin M4, chloroplastic", "gene_name": "MJK13.2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q6NPF9", "url": "https://www.uniprot.org/uniprotkb/Q6NPF9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.19259774", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 13 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.", "journal": "Plant molecular biology", "date": "2002-09", "authors": "Teakle Graham R, Manfield Iain W, Graham John F, Gilmartin Philip M", "reference": { "type": "PubMed", "id": "12139008", "url": "https://pubmed.ncbi.nlm.nih.gov/12139008" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8LAU9-1", "protein_name": "GATA transcription factor 1", "gene_name": "GATA1", "tax_name": 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The intrinsically disordered late embryogenesis abundant protein LEA18 from Arabidopsis thaliana modulates membrane stability through binding and folding.", "journal": "Biochimica et biophysica acta", "date": "2011-01", "authors": "Hundertmark Michaela, Dimova Rumiana, Lengefeld Jan, Seckler Robert, Hincha Dirk K", "reference": { "type": "PubMed", "id": "20875393", "url": "https://pubmed.ncbi.nlm.nih.gov/20875393" }, "referenced_glycans": [], 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Biol.", "date": "2000", "authors": "Jensen R B, Lykke-Andersen K, Frandsen G I, Nielsen H B, Haseloff J, Jespersen H M, Mundy J, Skriver K", "reference": { "type": "PubMed", "id": "11202441", "url": "https://pubmed.ncbi.nlm.nih.gov/11202441" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M354-1", "protein_name": "Probable ADP-ribosylation factor GTPase-activating protein AGD6", "gene_name": "AGD6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RXE7-1", "protein_name": "Probable ADP-ribosylation factor GTPase-activating protein AGD14", "gene_name": "AGD14; ZIGA4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FL69-1", "protein_name": "ADP-ribosylation factor GTPase-activating protein AGD5", "gene_name": "AGD5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FVJ3-1", "protein_name": "ADP-ribosylation factor GTPase-activating protein AGD12", "gene_name": "AGD12", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M354", "url": "https://www.uniprot.org/uniprotkb/Q9M354" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "mutagenesis": [ { "start_pos": 33, "end_pos": 33, "sequence_org": "C", "sequence_mut": "S", "comment": "Loss of zinc and PI-3-P binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9FVJ3", "url": "https://www.uniprot.org/uniprotkb/Q9FVJ3" }, { "database": "PubMed", "id": "11202441", "url": "https://pubmed.ncbi.nlm.nih.gov/11202441" } ], "uniprot_canonical_ac": "Q9FVJ3-1" } ], "record_id": "pubmed.11202441", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { 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Biol. 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"gene_name": "IPT4", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZUX7", "url": "https://www.uniprot.org/uniprotkb/Q9ZUX7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.14675438", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 9 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Distinct isoprenoid origins of cis- and trans-zeatin biosyntheses in Arabidopsis.", "journal": "J. Biol. Chem.", "date": "2004", "authors": "Kasahara Hiroyuki, Takei Kentaro, Ueda Nanae, Hishiyama Shojiro, Yamaya Tomoyuki, Kamiya Yuji, Yamaguchi Shinjiro, Sakakibara Hitoshi", "reference": { "type": "PubMed", "id": "14726522", "url": "https://pubmed.ncbi.nlm.nih.gov/14726522" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9ZUX7-1", "protein_name": "tRNA dimethylallyltransferase 2", "gene_name": "IPT2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93WC9-1", "protein_name": "Adenylate isopentenyltransferase 3, chloroplastic", "gene_name": "IPT3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94ID1-1", "protein_name": "Adenylate isopentenyltransferase 7, mitochondrial", "gene_name": "IPT7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94ID2-1", "protein_name": "Adenylate isopentenyltransferase 5, chloroplastic", "gene_name": "IPT5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94ID3-1", "protein_name": "Adenylate isopentenyltransferase 1, chloroplastic", "gene_name": "IPT1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LJL4-1", "protein_name": "Adenylate isopentenyltransferase 8, chloroplastic", "gene_name": "IPT8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SB60-1", "protein_name": "Adenylate isopentenyltransferase 4", "gene_name": "IPT4", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZUX7", "url": "https://www.uniprot.org/uniprotkb/Q9ZUX7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.14726522", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 7 } ], "sort_fields": [ 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Roles of Arabidopsis ATP/ADP isopentenyltransferases and tRNA isopentenyltransferases in cytokinin biosynthesis.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2006-10-31", "authors": "Miyawaki Kaori, Tarkowski Petr, Matsumoto-Kitano Miho, Kato Tomohiko, Sato Shusei, Tarkowska Danuse, Tabata Satoshi, Sandberg G\u00f6ran, Kakimoto Tatsuo", "reference": { "type": "PubMed", "id": "17062755", "url": 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"tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LJL4-1", "protein_name": "Adenylate isopentenyltransferase 8, chloroplastic", "gene_name": "IPT8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SB60-1", "protein_name": "Adenylate isopentenyltransferase 4", "gene_name": "IPT4", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZUX7", "url": "https://www.uniprot.org/uniprotkb/Q9ZUX7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.17062755", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 8 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "G-protein-coupled receptor 1, G-protein Galpha-subunit 1, and prephenate dehydratase 1 are required for blue light-induced production of phenylalanine in etiolated Arabidopsis.", "journal": "Plant physiology", "date": "2006-03", "authors": "Warpeha Katherine Mary, Lateef Syed Salman, Lapik Yevgeniya, Anderson Marybeth, Lee Bao-Shiang, Kaufman Lon Seth", "reference": { "type": "PubMed", "id": "16415218", "url": "https://pubmed.ncbi.nlm.nih.gov/16415218" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9ZUY3-1", "protein_name": "Arogenate dehydratase 3, chloroplastic", "gene_name": "ADT3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O04714-1", "protein_name": "G protein-coupled receptor 1", "gene_name": "GCR1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P18064-1", "protein_name": "Guanine nucleotide-binding protein alpha-1 subunit", "gene_name": "GPA1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZUY3", "url": "https://www.uniprot.org/uniprotkb/Q9ZUY3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16415218", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Phenylalanine biosynthesis in Arabidopsis thaliana. 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"2014-04-24", "authors": "Lin I Winnie, Sosso Davide, Chen Li-Qing, Gase Klaus, Kim Sang-Gyu, Kessler Danny, Klinkenberg Peter M, Gorder Molly K, Hou Bi-Huei, Qu Xiao-Qing, Carter Clay J, Baldwin Ian T, Frommer Wolf B", "reference": { "type": "PubMed", "id": "24670640", "url": "https://pubmed.ncbi.nlm.nih.gov/24670640" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9ZV02-1", "protein_name": "Bidirectional sugar transporter SWEET9", "gene_name": "SWEET9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94BT0-1", "protein_name": "Sucrose-phosphate synthase 1", "gene_name": "SPS1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FY54-1", "protein_name": "Probable sucrose-phosphate synthase 2", "gene_name": "SPS2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZV02", "url": "https://www.uniprot.org/uniprotkb/Q9ZV02" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.24670640", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "SWEETs, transporters for intracellular and intercellular sugar translocation.", "journal": "Current opinion in plant biology", "date": "2015-06", "authors": "Eom Joon-Seob, Chen Li-Qing, Sosso Davide, Julius Benjamin T, Lin I W, Qu Xiao-Qing, Braun David M, Frommer Wolf B", "reference": { "type": "PubMed", "id": "25988582", "url": "https://pubmed.ncbi.nlm.nih.gov/25988582" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9ZV02-1", "protein_name": "Bidirectional sugar transporter SWEET9", "gene_name": "SWEET9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FM10-1", "protein_name": "Bidirectional sugar transporter SWEET5", "gene_name": "ATVEX1; SWEET5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L9J7-1", "protein_name": "Bidirectional sugar transporter SWEET1", "gene_name": "SWEET1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84WN3-1", "protein_name": "Bidirectional sugar transporter SWEET17", "gene_name": "SWEET17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LFH5-1", "protein_name": "Bidirectional sugar transporter SWEET8", "gene_name": "SWEET8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O82587-1", "protein_name": "Bidirectional sugar transporter SWEET12", "gene_name": "SWEET12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FGQ2-1", "protein_name": "Bidirectional sugar transporter SWEET13", "gene_name": "SWEET13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FY94-1", "protein_name": "Bidirectional sugar transporter SWEET15", "gene_name": "SWEET15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LUR4-1", "protein_name": "Bidirectional sugar transporter SWEET16", "gene_name": "SWEET16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SMM5-1", "protein_name": "Bidirectional sugar transporter SWEET11", "gene_name": "SWEET11", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZV02", "url": "https://www.uniprot.org/uniprotkb/Q9ZV02" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.25988582", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 10 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Calcium signaling through protein kinases. The Arabidopsis calcium-dependent protein kinase gene family.", "journal": "Plant Physiol.", "date": "2002", "authors": "Cheng Shu-Hua, Willmann Matthew R, Chen Huei-Chi, Sheen Jen", "reference": { "type": "PubMed", "id": "12068094", "url": "https://pubmed.ncbi.nlm.nih.gov/12068094" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9ZV15-1", "protein_name": "Calcium-dependent protein kinase 20", "gene_name": "CPK20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39016-1", "protein_name": "Calcium-dependent protein kinase 11", "gene_name": "CPK11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C6P3-1", "protein_name": "Calcium-dependent protein kinase 33", "gene_name": "CPK33", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SZM3-1", "protein_name": "Calcium-dependent protein kinase 26", "gene_name": "CPK26", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZSA4-1", "protein_name": "Calcium-dependent protein kinase 27", "gene_name": "CPK27", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q7XJR9-1", "protein_name": "Calcium-dependent protein kinase 16", "gene_name": "CPK16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RWL2-1", "protein_name": "Calcium-dependent protein kinase 29", "gene_name": "CPK29", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W4I7-1", "protein_name": "Calcium-dependent protein kinase 13", "gene_name": "CPK13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49717-1", "protein_name": "Calcium-dependent protein kinase 15", "gene_name": "CPK15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FKW4-1", "protein_name": "Calcium-dependent protein kinase 28", "gene_name": "CPK28", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38869-1", "protein_name": "Calcium-dependent protein kinase 4", "gene_name": "CPK4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SSF8-1", "protein_name": "Calcium-dependent protein kinase 30", "gene_name": "CPK30", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FMP5-1", "protein_name": "Calcium-dependent protein kinase 17", "gene_name": "CPK17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M101-1", "protein_name": "Calcium-dependent protein kinase 23", "gene_name": "CPK23", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZSA2-1", "protein_name": "Calcium-dependent protein kinase 21", "gene_name": "CPK21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P93759-1", "protein_name": "Calcium-dependent protein kinase 14", "gene_name": "CPK14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q1PE17-1", "protein_name": "Calcium-dependent protein kinase 18", "gene_name": "CPK18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38873-1", "protein_name": "Calcium-dependent protein kinase 7", "gene_name": "CPK7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q06850-1", "protein_name": "Calcium-dependent protein kinase 1", "gene_name": "CPK1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q1PFH8-1", "protein_name": "Calcium-dependent protein kinase 19", "gene_name": "CPK19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38868-1", "protein_name": "Calcium-dependent protein kinase 9", "gene_name": "CPK9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38870-1", "protein_name": "Calcium-dependent protein kinase 2", "gene_name": "CPK2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38871-1", "protein_name": "Calcium-dependent protein kinase 5", "gene_name": "CPK5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38872-1", "protein_name": "Calcium-dependent protein kinase 6", "gene_name": "CPK6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3E9C0-1", "protein_name": "Calcium-dependent protein kinase 34", "gene_name": "CPK34", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6NLQ6-1", "protein_name": "Calcium-dependent protein kinase 32", "gene_name": "CPK32", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q42396-1", "protein_name": "Calcium-dependent protein kinase 12", "gene_name": "CPK12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q42438-1", "protein_name": "Calcium-dependent protein kinase 8", "gene_name": "CPK8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q42479-1", "protein_name": "Calcium-dependent protein kinase 3", "gene_name": "CPK3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M9V8-1", "protein_name": "Calcium-dependent protein kinase 10", "gene_name": "CPK10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S9V0-1", "protein_name": "Calcium-dependent protein kinase 31", "gene_name": "CPK31", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SIQ7-1", "protein_name": "Calcium-dependent protein kinase 24", "gene_name": "CPK24", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJ61-1", "protein_name": "Calcium-dependent protein kinase 25", "gene_name": "CPK25", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZSA3-1", "protein_name": "Calcium-dependent protein kinase 22", "gene_name": "CPK22", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZV15", "url": "https://www.uniprot.org/uniprotkb/Q9ZV15" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12068094", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 34 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The Arabidopsis CDPK-SnRK superfamily of protein kinases.", "journal": "Plant Physiol.", "date": "2003", "authors": "Hrabak Estelle M, Chan Catherine W M, Gribskov Michael, Harper Jeffrey F, Choi Jung H, Halford Nigel, Kudla Jorg, Luan Sheng, Nimmo Hugh G, Sussman Michael R, Thomas Martine, Walker-Simmons Kay, Zhu Jian-Kang, Harmon Alice C", "reference": { "type": "PubMed", "id": "12805596", "url": "https://pubmed.ncbi.nlm.nih.gov/12805596" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9ZV15-1", "protein_name": "Calcium-dependent protein kinase 20", "gene_name": "CPK20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q940H6-1", "protein_name": "Serine/threonine-protein kinase SRK2E", "gene_name": "OST1; SRK2E", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39192-1", "protein_name": "Serine/threonine-protein kinase SRK2D", "gene_name": "SNRK22; SRK2D", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22932-1", "protein_name": "CBL-interacting serine/threonine-protein kinase 11", "gene_name": "CIPK11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38997-2", "protein_name": "SNF1-related protein kinase catalytic subunit alpha KIN10", "gene_name": "KIN10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39016-1", "protein_name": "Calcium-dependent protein kinase 11", "gene_name": "CPK11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39193-1", "protein_name": "Serine/threonine-protein kinase SRK2I", "gene_name": "SRK2I", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LEU7-1", "protein_name": "CBL-interacting serine/threonine-protein kinase 5", "gene_name": "CIPK5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LZW4-1", "protein_name": "CBL-interacting serine/threonine-protein kinase 14", "gene_name": "CIPK14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9MAM1-3", "protein_name": "CBL-interacting serine/threonine-protein kinase 9", "gene_name": "CIPK9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SEZ7-1", "protein_name": "CBL-interacting serine/threonine-protein kinase 16", "gene_name": "CIPK16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O64812-1", "protein_name": "Serine/threonine-protein kinase SRK2J", "gene_name": "SRK2J", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94CG0-1", "protein_name": "CBL-interacting serine/threonine-protein kinase 21", "gene_name": "CIPK21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C6P3-1", "protein_name": "Calcium-dependent protein kinase 33", "gene_name": "CPK33", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94C40-1", "protein_name": "CBL-interacting serine/threonine-protein kinase 17", "gene_name": "CIPK17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W1D5-1", "protein_name": "CBL-interacting serine/threonine-protein kinase 25", "gene_name": "CIPK25", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLZ3-1", "protein_name": "SNF1-related protein kinase catalytic subunit alpha KIN12", "gene_name": "KIN12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LP51-1", "protein_name": "CBL-interacting serine/threonine-protein kinase 18", "gene_name": "CIPK18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SZM3-1", "protein_name": "Calcium-dependent protein kinase 26", "gene_name": "CPK26", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SUL7-1", "protein_name": "CBL-interacting serine/threonine-protein kinase 4", "gene_name": "CIPK4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZSA4-1", "protein_name": "Calcium-dependent protein kinase 27", "gene_name": "CPK27", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22971-1", "protein_name": "CBL-interacting serine/threonine-protein kinase 13", "gene_name": "CIPK13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q7XJR9-1", "protein_name": "Calcium-dependent protein kinase 16", "gene_name": "CPK16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RWL2-1", "protein_name": "Calcium-dependent protein kinase 29", "gene_name": "CPK29", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84VQ3-1", "protein_name": "CBL-interacting serine/threonine-protein kinase 26", "gene_name": "CIPK26", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W4I7-1", "protein_name": "Calcium-dependent protein kinase 13", "gene_name": "CPK13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49717-1", "protein_name": "Calcium-dependent protein kinase 15", "gene_name": "CPK15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O65554-1", "protein_name": "CBL-interacting serine/threonine-protein kinase 6", "gene_name": "CIPK6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80673-1", "protein_name": "CDPK-related kinase 1", "gene_name": "CRK1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80902-1", "protein_name": "CBL-interacting serine/threonine-protein kinase 22", "gene_name": "CIPK22", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93VD3-1", "protein_name": "CBL-interacting serine/threonine-protein kinase 23", "gene_name": "CIPK23", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FKW4-1", "protein_name": "Calcium-dependent protein kinase 28", "gene_name": "CPK28", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P43292-1", "protein_name": "Serine/threonine-protein kinase SRK2G", "gene_name": "SNRK21; SRK2G", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P43291-1", "protein_name": "Serine/threonine-protein kinase SRK2A", "gene_name": "SNRK24; SRK2A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9STV4-1", "protein_name": "CBL-interacting serine/threonine-protein kinase 8", "gene_name": "CIPK8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P92937-1", "protein_name": "CBL-interacting serine/threonine-protein kinase 15", "gene_name": "CIPK15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38869-1", "protein_name": "Calcium-dependent protein kinase 4", "gene_name": "CPK4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RWC9-1", "protein_name": "CBL-interacting serine/threonine-protein kinase 1", "gene_name": "CIPK1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C562-1", "protein_name": "CBL-interacting serine/threonine-protein kinase 10", "gene_name": "CIPK10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LYQ8-1", "protein_name": "CBL-interacting serine/threonine-protein kinase 2", "gene_name": "CIPK2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SG12-1", "protein_name": "CDPK-related kinase 6", "gene_name": "CRK6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SN43-1", "protein_name": "CBL-interacting serine/threonine-protein kinase 12", "gene_name": "CIPK12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SSF8-1", "protein_name": "Calcium-dependent protein kinase 30", "gene_name": "CPK30", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XIW0-1", "protein_name": "CBL-interacting serine/threonine-protein kinase 7", "gene_name": "CIPK7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C958-1", "protein_name": "Serine/threonine-protein kinase SRK2B", "gene_name": "SRK2B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FFP9-1", "protein_name": "Serine/threonine-protein kinase SRK2H", "gene_name": "SRK2H", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FIM9-1", "protein_name": "CDPK-related kinase 4", "gene_name": "CRK4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FJ54-1", "protein_name": "CBL-interacting serine/threonine-protein kinase 20", "gene_name": "CIPK20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FMP5-1", "protein_name": "Calcium-dependent protein kinase 17", "gene_name": "CPK17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M101-1", "protein_name": "Calcium-dependent protein kinase 23", "gene_name": "CPK23", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FX86-1", "protein_name": "CDPK-related kinase 8", "gene_name": "CRK8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LET1-1", "protein_name": "CDPK-related kinase 7", "gene_name": "CRK7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LJL9-1", "protein_name": "CDPK-related kinase 2", "gene_name": "CRK2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZSA2-1", "protein_name": "Calcium-dependent protein kinase 21", "gene_name": "CPK21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P93759-1", "protein_name": "Calcium-dependent protein kinase 14", "gene_name": "CPK14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q1PE17-1", "protein_name": "Calcium-dependent protein kinase 18", "gene_name": "CPK18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38873-1", "protein_name": "Calcium-dependent protein kinase 7", "gene_name": "CPK7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P92958-1", "protein_name": "SNF1-related protein kinase catalytic subunit alpha KIN11", "gene_name": "KIN11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q06850-1", "protein_name": "Calcium-dependent protein kinase 1", "gene_name": "CPK1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q1PFH8-1", "protein_name": "Calcium-dependent protein kinase 19", "gene_name": "CPK19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q2V452-2", "protein_name": "CBL-interacting serine/threonine-protein kinase 3", "gene_name": "CIPK3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38868-1", "protein_name": "Calcium-dependent protein kinase 9", "gene_name": "CPK9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38870-1", "protein_name": "Calcium-dependent protein kinase 2", "gene_name": "CPK2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38871-1", "protein_name": "Calcium-dependent protein kinase 5", "gene_name": "CPK5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38872-1", "protein_name": "Calcium-dependent protein kinase 6", "gene_name": "CPK6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3E9C0-1", "protein_name": "Calcium-dependent protein kinase 34", "gene_name": "CPK34", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6NLQ6-1", "protein_name": "Calcium-dependent protein kinase 32", "gene_name": "CPK32", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZUZ2-1", "protein_name": "CDPK-related kinase 3", "gene_name": "CRK3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q42396-1", "protein_name": "Calcium-dependent protein kinase 12", "gene_name": "CPK12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q42438-1", "protein_name": "Calcium-dependent protein kinase 8", "gene_name": "CPK8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q42479-1", "protein_name": "Calcium-dependent protein kinase 3", "gene_name": "CPK3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FJ55-1", "protein_name": "CBL-interacting serine/threonine-protein kinase 19", "gene_name": "CIPK19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LDI3-1", "protein_name": "CBL-interacting serine/threonine-protein kinase 24", "gene_name": "CIPK24; SOS2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M9E9-1", "protein_name": "Serine/threonine-protein kinase SRK2C", "gene_name": "SRK2C", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M9V8-1", "protein_name": "Calcium-dependent protein kinase 10", "gene_name": "CPK10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S9V0-1", "protein_name": "Calcium-dependent protein kinase 31", "gene_name": "CPK31", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCS2-1", "protein_name": "CDPK-related kinase 5", "gene_name": "CRK5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SIQ7-1", "protein_name": "Calcium-dependent protein kinase 24", "gene_name": "CPK24", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJ61-1", "protein_name": "Calcium-dependent protein kinase 25", "gene_name": "CPK25", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SMQ4-1", "protein_name": "Serine/threonine-protein kinase SRK2F", "gene_name": "SRK2F", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZSA3-1", "protein_name": "Calcium-dependent protein kinase 22", "gene_name": "CPK22", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZV15", "url": "https://www.uniprot.org/uniprotkb/Q9ZV15" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12805596", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 81 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Proteomics of the chloroplast envelope membranes from Arabidopsis thaliana.", "journal": "Mol. Cell. Proteomics", "date": "2003", "authors": "Ferro Myriam, Salvi Daniel, Brugi\u00e8re Sabine, Miras St\u00e9phane, Kowalski Sol\u00e8ne, Louwagie Mathilde, Garin J\u00e9r\u00f4me, Joyard Jacques, Rolland Norbert", "reference": { "type": "PubMed", "id": "12766230", "url": "https://pubmed.ncbi.nlm.nih.gov/12766230" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9ZV24-1", "protein_name": "Outer envelope pore protein 16-1, chloroplastic", "gene_name": "OEP161", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O03042-1", "protein_name": "Ribulose bisphosphate carboxylase large chain", "gene_name": "rbcL", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RXN3-1", "protein_name": "Phosphoenolpyruvate/phosphate translocator 1, chloroplastic", "gene_name": "PPT1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93V66-1", "protein_name": "Protein FATTY ACID EXPORT 1, chloroplastic", "gene_name": "FAX1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23680-1", "protein_name": "Translocase of chloroplast 33, chloroplastic", "gene_name": "TOC33", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81283-1", "protein_name": "Translocase of chloroplast 159, chloroplastic", "gene_name": "TOC159", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P42737-1", "protein_name": "Beta carbonic anhydrase 2, chloroplastic", "gene_name": "BCA2; CA2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P10795-1", "protein_name": "Ribulose bisphosphate carboxylase small subunit 1A, chloroplastic", "gene_name": "RBCS-1A; RBCS1A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P10896-1", "protein_name": "Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic", "gene_name": "RCA", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P21218-1", "protein_name": "Protochlorophyllide reductase B, chloroplastic", "gene_name": "PORB", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P25856-1", "protein_name": "Glyceraldehyde-3-phosphate dehydrogenase GAPA1, chloroplastic", "gene_name": "GAPA1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P27521-1", "protein_name": "Chlorophyll a-b binding protein 4, chloroplastic", "gene_name": "LHCA4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P46310-1", "protein_name": "sn-2 acyl-lipid omega-3 desaturase (ferredoxin), chloroplastic", "gene_name": "FAD7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P46312-1", "protein_name": "Omega-6 fatty acid desaturase, chloroplastic", "gene_name": "FAD6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q96242-1", "protein_name": "Allene oxide synthase, chloroplastic", "gene_name": "CYP74A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZTZ7-1", "protein_name": "K(+) efflux antiporter 1, chloroplastic", "gene_name": "KEA1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94AG6-1", "protein_name": "S-adenosylmethionine carrier 1, chloroplastic/mitochondrial", "gene_name": "SAMC1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FVQ4-1", "protein_name": "Plastidal glycolate/glycerate translocator 1, chloroplastic", "gene_name": "PLGG1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q1EBV7-1", "protein_name": "Sodium/pyruvate cotransporter BASS2, chloroplastic", "gene_name": "BASS2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9STE8-1", "protein_name": "Protein TOC75-3, chloroplastic", "gene_name": "TOC75-3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SN86-1", "protein_name": "Malate dehydrogenase, chloroplastic", "gene_name": "F1P2.70", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZV24", "url": "https://www.uniprot.org/uniprotkb/Q9ZV24" } ], "common_name": 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Baisa Gary, Anne Pauline, Gissot Lionel, Palauqui Jean-Christophe, Masson Patrick H, Bednarek Sebastian Y, Otegui Marisa S", "reference": { "type": "PubMed", "id": "25149602", "url": "https://pubmed.ncbi.nlm.nih.gov/25149602" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9ZV57-1", "protein_name": "Protein VASCULATURE COMPLEXITY AND CONNECTIVITY", "gene_name": "VCC", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SS80-1", "protein_name": "Protein OCTOPUS", "gene_name": "OPS", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZV57", "url": "https://www.uniprot.org/uniprotkb/Q9ZV57" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.25149602", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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}, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis.", "journal": "New Phytol.", "date": "2020", "authors": "Meinke David W", "reference": { "type": "PubMed", "id": 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"gene_name": "CAD7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LE59-1", "protein_name": "Polygalacturonate 4-alpha-galacturonosyltransferase", "gene_name": "GAUT1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZPZ1-1", "protein_name": "Putative galacturonosyltransferase 2", "gene_name": "GAUT2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LTK3-1", "protein_name": "Homeobox-leucine zipper protein HDG7", "gene_name": "HDG7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M2E8-1", "protein_name": "Homeobox-leucine zipper protein HDG1", "gene_name": "HDG1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SKT6-1", "protein_name": "Probable galacturonosyltransferase 10", "gene_name": "GAUT10", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZV65", "url": "https://www.uniprot.org/uniprotkb/Q9ZV65" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.10809443", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 30 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": 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[] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Characterization of the class IV homeodomain-leucine zipper gene family in Arabidopsis.", "journal": "Plant Physiol.", "date": "2006", "authors": "Nakamura Miyuki, Katsumata Hiroshi, Abe Mitsutomo, Yabe Naoto, Komeda Yoshibumi, Yamamoto Kotaro T, Takahashi Taku", "reference": { "type": "PubMed", "id": "16778018", "url": "https://pubmed.ncbi.nlm.nih.gov/16778018" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9ZV65-1", "protein_name": "Homeobox-leucine zipper protein HDG3", "gene_name": "HDG3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M9P4-1", "protein_name": "Homeobox-leucine zipper protein HDG8", "gene_name": "HDG8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94C37-1", "protein_name": "Homeobox-leucine zipper protein HDG2", "gene_name": "HDG2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FFI0-1", "protein_name": "Homeobox-leucine zipper protein HDG9", "gene_name": "HDG9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FJS2-1", "protein_name": "Homeobox-leucine zipper protein HDG5", "gene_name": "HDG5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S9Z0-1", "protein_name": "Homeobox-leucine zipper protein HDG10", "gene_name": "HDG10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RWU4-1", "protein_name": "Homeobox-leucine zipper protein MERISTEM L1", "gene_name": "ATML1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93V99-1", "protein_name": "Homeobox-leucine zipper protein PROTODERMAL FACTOR 2", "gene_name": "PDF2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L7H4-1", "protein_name": "Homeobox-leucine zipper protein HDG4", "gene_name": "HDG4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FVI6-1", "protein_name": "Homeobox-leucine zipper protein HDG6", "gene_name": "HDG6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FX31-1", "protein_name": "Homeobox-leucine zipper protein HDG11", "gene_name": "HDG11", "tax_name": "Mouse-ear cress" }, { 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"tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38914-1", "protein_name": "AP2-like ethylene-responsive transcription factor ANT", "gene_name": "ANT", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6J9N8-1", "protein_name": "AP2-like ethylene-responsive transcription factor AIL7", "gene_name": "AIL7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LTK3-1", "protein_name": "Homeobox-leucine zipper protein HDG7", "gene_name": "HDG7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M2E8-1", "protein_name": "Homeobox-leucine zipper protein HDG1", "gene_name": "HDG1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZV65", "url": "https://www.uniprot.org/uniprotkb/Q9ZV65" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.25564655", "abstract": 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "Control of Arabidopsis leaf morphogenesis through regulation of the YABBY and KNOX families of transcription factors.", "journal": "Genetics", "date": "2010-09", "authors": "Ha Chan Man, Jun Ji Hyung, Fletcher Jennifer C", "reference": { "type": "PubMed", "id": "20610407", "url": "https://pubmed.ncbi.nlm.nih.gov/20610407" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9ZVC2-1", "protein_name": "Regulatory protein NPR5", "gene_name": "NPR5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M1I7-1", "protein_name": "Regulatory protein NPR6", "gene_name": "BOP1; NPR6", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZVC2", "url": "https://www.uniprot.org/uniprotkb/Q9ZVC2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } 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"field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Expression dynamics of WOX genes mark cell fate decisions during early embryonic patterning in Arabidopsis thaliana.", "journal": "Development", "date": "2004", "authors": "Haecker Achim, Gross-Hardt Rita, Geiges Bernd, Sarkar Ananda, Breuninger Holger, Herrmann Marita, Laux Thomas", "reference": { "type": "PubMed", "id": "14711878", "url": "https://pubmed.ncbi.nlm.nih.gov/14711878" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9ZVF5-1", "protein_name": "WUSCHEL-related homeobox 6", "gene_name": "WOX6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LM83-1", "protein_name": "Putative WUSCHEL-related homeobox 10", "gene_name": "WOX10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81788-1", "protein_name": "WUSCHEL-related homeobox 13", "gene_name": "WOX13", "tax_name": "Mouse-ear cress" }, { 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"uniprot_canonical_ac": "Q6E7H0-1", "protein_name": "Origin of replication complex subunit 3", "gene_name": "ORC3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q501D5-1", "protein_name": "Mini-chromosome maintenance complex-binding protein", "gene_name": "ETG1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZVH3", "url": "https://www.uniprot.org/uniprotkb/Q9ZVH3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16126853", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "FAX1, a novel membrane protein mediating plastid fatty acid export.", "journal": "PLoS Biol.", "date": "2015", "authors": "Li Nannan, G\u00fcgel Irene Luise, Giavalisco Patrick, Zeisler Viktoria, Schreiber Lukas, Soll J\u00fcrgen, Philippar Katrin", "reference": { "type": "PubMed", "id": "25646734", "url": "https://pubmed.ncbi.nlm.nih.gov/25646734" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9ZVH7-1", "protein_name": "Protein FATTY ACID EXPORT 3, chloroplastic", "gene_name": "FAX3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LJU6-1", "protein_name": "Protein FATTY ACID EXPORT 6", "gene_name": "FAX6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LPG1-1", "protein_name": "Protein FATTY ACID EXPORT 4, chloroplastic", "gene_name": "FAX4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94A32-1", "protein_name": "Protein FATTY ACID EXPORT 2, chloroplastic", "gene_name": "FAX2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C6T7-1", "protein_name": "Protein FATTY ACID EXPORT 5", "gene_name": "FAX5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O64847-1", "protein_name": "Protein FATTY ACID EXPORT 7", "gene_name": "FAX7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93V66-1", "protein_name": "Protein FATTY ACID EXPORT 1, chloroplastic", "gene_name": "FAX1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZVH7", "url": 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"count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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in arabidopsis seed dormancy.", "journal": "Journal of molecular biology", "date": "2009-02-27", "authors": "Grasser Marion, Kane Caroline M, Merkle Thomas, Melzer Michael, Emmersen Jeppe, Grasser Klaus D", "reference": { "type": "PubMed", "id": "19150360", "url": "https://pubmed.ncbi.nlm.nih.gov/19150360" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9ZVH8-1", "protein_name": "Transcription elongation factor TFIIS", "gene_name": "TFIIS", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZVH8", "url": "https://www.uniprot.org/uniprotkb/Q9ZVH8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.19150360", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of the Arabidopsis REDUCED DORMANCY 2 gene uncovers a role for the polymerase associated factor 1 complex in seed dormancy.", "journal": "PloS one", "date": "2011", "authors": "Liu Yongxiu, Geyer Regina, van Zanten Martijn, Carles Annaick, Li Yong, H\u00f6rold Anja, van Nocker Steven, Soppe Wim J J", "reference": { "type": "PubMed", "id": "21799800", "url": 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N-methyltransferase ATXR7", "gene_name": "ATXR7; SDG25", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZVH8", "url": "https://www.uniprot.org/uniprotkb/Q9ZVH8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.21799800", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 7 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": 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0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular dissection of plant cytokinesis and phragmoplast structure: a survey of GFP-tagged proteins.", "journal": "Plant J.", "date": "2004", "authors": "Van Damme Dani\u00ebl, Bouget Fran\u00e7ois-Yves, Van Poucke Kris, Inz\u00e9 Dirk, Geelen Danny", "reference": { "type": "PubMed", "id": "15469496", "url": "https://pubmed.ncbi.nlm.nih.gov/15469496" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9ZVJ3-1", "protein_name": "65-kDa microtubule-associated protein 5", "gene_name": "MAP65-5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LZY0-1", "protein_name": "65-kDa microtubule-associated protein 4", "gene_name": "MAP65-4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O64629-1", "protein_name": "Serine/threonine-protein kinase Aurora-3", "gene_name": "AUR3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C7G0-1", "protein_name": "65-kDa microtubule-associated protein 8", "gene_name": "MAP65-8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K494-1", "protein_name": "Putative MOB kinase activator-like 2B", "gene_name": "MOB2B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K495-1", "protein_name": "MOB kinase activator-like 2A", "gene_name": "MOB2A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LEG3-1", "protein_name": "65-kDa microtubule-associated protein 2", "gene_name": "MAP65-2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLP0-1", "protein_name": "65-kDa microtubule-associated protein 1", "gene_name": "MAP65-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FHI1-1", "protein_name": "MOB kinase activator-like 1A", "gene_name": "MOB1A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FHM4-1", "protein_name": "65-kDa microtubule-associated protein 3", "gene_name": "MAP65-3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LHE9-1", "protein_name": "Myosin-1", "gene_name": "ATM1; VIII-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J8D3-1", "protein_name": "Protein TPLATE", "gene_name": "TPLATE", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M077-1", "protein_name": "Serine/threonine-protein kinase Aurora-1", "gene_name": "AUR1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SIS3-1", "protein_name": "65-kDa microtubule-associated protein 6", "gene_name": "MAP65-6", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZVJ3", "url": "https://www.uniprot.org/uniprotkb/Q9ZVJ3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": 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