[ { "title": "PIRIN2 stabilizes cysteine protease XCP2 and increases susceptibility to the vascular pathogen Ralstonia solanacearum in Arabidopsis.", "journal": "The Plant journal : for cell and molecular biology", "date": "2014-09", "authors": "Zhang Bo, Tremousaygue Dominique, Denanc\u00e9 Nicolas, van Esse H Peter, H\u00f6rger Anja C, Dabos Patrick, Goffner Deborah, Thomma Bart P H J, van der Hoorn Renier A L, Tuominen Hannele", "reference": { "type": "PubMed", "id": "24947605", "url": "https://pubmed.ncbi.nlm.nih.gov/24947605" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9ZW82-1", "protein_name": "Pirin-like protein 2", "gene_name": "PRN2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P43297-1", "protein_name": "Cysteine proteinase RD21A", "gene_name": "RD21A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LM66-1", "protein_name": "Cysteine protease XCP2", "gene_name": "XCP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FMH8-1", "protein_name": "Probable cysteine protease RD21B", "gene_name": "RD21B", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZW82", "url": "https://www.uniprot.org/uniprotkb/Q9ZW82" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.24947605", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Dynamic response of plant genome to ultraviolet radiation and other genotoxic stresses.", "journal": "Mutat. Res.", "date": "2005", "authors": "Molinier Jean, Oakeley Edward J, Niederhauser Olivier, Kovalchuk Igor, Hohn Barbara", "reference": { "type": "PubMed", "id": "15748650", "url": "https://pubmed.ncbi.nlm.nih.gov/15748650" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9ZV43-1", "protein_name": "Protein CHROMATIN REMODELING 8", "gene_name": "CHR8", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZV43", "url": "https://www.uniprot.org/uniprotkb/Q9ZV43" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15748650", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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"CHR8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4KBP5-1", "protein_name": "Protein CHROMATIN REMODELING 4", "gene_name": "CHR4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6EVK6-1", "protein_name": "Chromatin remodeling ATPase BRAHMA", "gene_name": "BRM", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4I2H2-1", "protein_name": "Switch 2", "gene_name": "SWI2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4I8S3-1", "protein_name": "SNF2 domain-containing protein CLASSY 3", "gene_name": "CLSY3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IV99-1", "protein_name": "Protein CHROMATIN REMODELING 5", "gene_name": "CHR5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W103-1", "protein_name": "Protein CHROMATIN REMODELING 24", "gene_name": "CHR24", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LK10-1", "protein_name": "SNF2 domain-containing protein CLASSY 4", "gene_name": "CLSY4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XFH4-1", "protein_name": "Chromatin remodeling protein DDM1", "gene_name": "DDM1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q7X9V2-1", "protein_name": "Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1", "gene_name": "PIE1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZUL5-1", "protein_name": "Protein CHROMATIN REMODELING 19", "gene_name": "ETL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0PCS3-1", "protein_name": "Protein CHROMATIN REMODELING 25", "gene_name": "CHR25; RAD54", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K128-1", "protein_name": "Probable ATP-dependent DNA helicase CHR23", "gene_name": "CHR23", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4HW51-1", "protein_name": "Protein CHROMATIN REMODELING 20", "gene_name": "ATRX", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J9M5-1", "protein_name": "Probable ATP-dependent DNA helicase CHR12", "gene_name": "CHR12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SIW2-1", "protein_name": "Protein CHROMATIN REMODELING 35", "gene_name": "DRD1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S775-1", "protein_name": "CHD3-type chromatin-remodeling factor PICKLE", "gene_name": "PKL", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZV43", "url": "https://www.uniprot.org/uniprotkb/Q9ZV43" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16547115", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 17 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arabidopsis plasma membrane protein crucial for Ca2+ influx and touch sensing in roots.", "journal": "Proc. Natl. Acad. Sci. U.S.A.", "date": "2007", "authors": "Nakagawa Yuko, Katagiri Takeshi, Shinozaki Kazuo, Qi Zhi, Tatsumi Hitoshi, Furuichi Takuya, Kishigami Akio, Sokabe Masahiro, Kojima Itaru, Sato Shusei, Kato Tomohiko, Tabata Satoshi, Iida Kazuko, Terashima Asuka, Nakano Masataka, Ikeda Mitsunobu, Yamanaka Takuya, Iida Hidetoshi", "reference": { "type": "PubMed", "id": "17360695", "url": "https://pubmed.ncbi.nlm.nih.gov/17360695" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q3EBY6-1", "protein_name": "Protein MID1-COMPLEMENTING ACTIVITY 2", "gene_name": "MCA2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L7E9-1", "protein_name": "Protein MID1-COMPLEMENTING ACTIVITY 1", "gene_name": "MCA1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q3EBY6", "url": "https://www.uniprot.org/uniprotkb/Q3EBY6" } ], "common_name": "Mouse-ear cress", "glygen_name": 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"authors": "Yamanaka Takuya, Nakagawa Yuko, Mori Kendo, Nakano Masataka, Imamura Tomomi, Kataoka Hajime, Terashima Asuka, Iida Kazuko, Kojima Itaru, Katagiri Takeshi, Shinozaki Kazuo, Iida Hidetoshi", "reference": { "type": "PubMed", "id": "20097794", "url": "https://pubmed.ncbi.nlm.nih.gov/20097794" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q3EBY6-1", "protein_name": "Protein MID1-COMPLEMENTING ACTIVITY 2", "gene_name": "MCA2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L7E9-1", "protein_name": "Protein MID1-COMPLEMENTING ACTIVITY 1", "gene_name": "MCA1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q3EBY6", "url": "https://www.uniprot.org/uniprotkb/Q3EBY6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.20097794", "abstract": "", 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Y, Grienenberger J M, Bonnard G, Meyer Y", "reference": { "type": "PubMed", "id": "11717467", "url": "https://pubmed.ncbi.nlm.nih.gov/11717467" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q39242-1", "protein_name": "Thioredoxin reductase 2", "gene_name": "NTR2; NTRA", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93VQ9-1", "protein_name": "Thioredoxin O2, mitochondrial", "gene_name": "F17F8.6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O64764-1", "protein_name": "Thioredoxin O1, mitochondrial", "gene_name": "F19I3.24", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39243-1", "protein_name": "Thioredoxin reductase 1, mitochondrial", "gene_name": "NTR1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q39242", "url": "https://www.uniprot.org/uniprotkb/Q39242" } ], "common_name": "Mouse-ear cress", 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"2005", "authors": "Reichheld Jean-Philippe, Meyer Etienne, Khafif Mehdi, Bonnard G\u00e9raldine, Meyer Yves", "reference": { "type": "PubMed", "id": "15642341", "url": "https://pubmed.ncbi.nlm.nih.gov/15642341" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q39242-1", "protein_name": "Thioredoxin reductase 2", "gene_name": "NTR2; NTRA", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39243-1", "protein_name": "Thioredoxin reductase 1, mitochondrial", "gene_name": "NTR1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q39242", "url": "https://www.uniprot.org/uniprotkb/Q39242" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15642341", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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Mol. Biol.", "date": "1994", "authors": "Jacquot J P, Rivera-Madrid R, Marinho P, Kollarova M, Le Mar\u00e9chal P, Miginiac-Maslow M, Meyer Y", "reference": { "type": "PubMed", "id": "8308900", "url": "https://pubmed.ncbi.nlm.nih.gov/8308900" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q39242-1", "protein_name": "Thioredoxin reductase 2", "gene_name": "NTR2; NTRA", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39243-1", "protein_name": "Thioredoxin reductase 1, mitochondrial", "gene_name": "NTR1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q39242", "url": "https://www.uniprot.org/uniprotkb/Q39242" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.8308900", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], 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Cu\u00f1ado Nieves, Franklin F Chris H", "reference": { "type": "PubMed", "id": "22319460", "url": "https://pubmed.ncbi.nlm.nih.gov/22319460" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q0WR66-1", "protein_name": "Meiosis-specific protein ASY3", "gene_name": "ASY3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4HRV8-1", "protein_name": "Meiosis-specific protein ASY1", "gene_name": "ASY1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q0WR66", "url": "https://www.uniprot.org/uniprotkb/Q0WR66" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.22319460", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Functional analyses of differentially expressed isoforms of the Arabidopsis inositol phosphorylceramide synthase.", "journal": "Plant molecular biology", "date": "2010-07", "authors": "Mina J G, Okada Y, Wansadhipathi-Kannangara N K, Pratt S, Shams-Eldin H, Schwarz R T, Steel P G, Fawcett T, Denny P W", "reference": { "type": "PubMed", "id": "20309609", "url": "https://pubmed.ncbi.nlm.nih.gov/20309609" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q56Y01-1", 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Biol.", "date": "1994", "authors": "Watts F Z, Butt N, Layfield P, Machuka J, Burke J F, Moore A L", "reference": { "type": "PubMed", "id": "7948890", "url": "https://pubmed.ncbi.nlm.nih.gov/7948890" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P42750-1", "protein_name": "Ubiquitin-conjugating enzyme E2 6", "gene_name": "UBC6", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P42750", "url": "https://www.uniprot.org/uniprotkb/P42750" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.7948890", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Regional specification of stomatal production by the putative ligand CHALLAH.", "journal": "Development (Cambridge, England)", "date": "2010-02", "authors": "Abrash Emily B, Bergmann Dominique C", "reference": { "type": "PubMed", "id": "20056678", "url": "https://pubmed.ncbi.nlm.nih.gov/20056678" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q1PEY6-1", "protein_name": "EPIDERMAL PATTERNING FACTOR-like protein 6", "gene_name": "CHAL; EPFL6", "tax_name": "Mouse-ear cress" 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"2004-06", "authors": "Lee Sumin, Lee Eun Jung, Yang Eun Ju, Lee Ji Eun, Park Ae Ran, Song Won Hyun, Park Ohkmae K", "reference": { "type": "PubMed", "id": "15161963", "url": "https://pubmed.ncbi.nlm.nih.gov/15161963" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9ZVJ6-1", "protein_name": "Annexin D4", "gene_name": "ANN4; ANNAT4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SYT0-1", "protein_name": "Annexin D1", "gene_name": "ANN1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZVJ6", "url": "https://www.uniprot.org/uniprotkb/Q9ZVJ6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15161963", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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Vincent, Seidel Julian, Schyrba Laura K, Ivanauskaite Aiste, Eirich J\u00fcrgen, Hell R\u00fcdiger, Schwarzer Dirk, Mulo Paula, Wirtz Markus, Meinnel Thierry, Giglione Carmela, Finkemeier Iris", "reference": { "type": "PubMed", "id": "32633465", "url": "https://pubmed.ncbi.nlm.nih.gov/32633465" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9ZV08-1", "protein_name": "GCN5-related N-acetyltransferase 4, chloroplastic", "gene_name": "ATNAA70; GNAT4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZV06-1", "protein_name": "GCN5-related N-acetyltransferase 8", "gene_name": "GNAT8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S8E7-1", "protein_name": "GCN5-related N-acetyltransferase 9", "gene_name": "GNAT9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q7X9V3-1", "protein_name": "GCN5-related N-acetyltransferase 2, chloroplastic", "gene_name": "NSI", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": 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Biol.", "date": "2001", "authors": "Thom R, Dixon D P, Edwards R, Cole D J, Lapthorn A J", "reference": { "type": "PubMed", "id": "11352584", "url": "https://pubmed.ncbi.nlm.nih.gov/11352584" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9ZVQ3-1", "protein_name": "Glutathione S-transferase Z1", "gene_name": "GSTZ1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZVQ3", "url": "https://www.uniprot.org/uniprotkb/Q9ZVQ3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11352584", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Characterisation of a zeta class glutathione transferase from Arabidopsis thaliana with a putative role in tyrosine catabolism.", "journal": "Arch. 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"gene_name": "TAF1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9AST1-1", "protein_name": "Transcription initiation factor TFIID subunit 15", "gene_name": "TAF15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94KD0-1", "protein_name": "Transcription initiation factor TFIID subunit 15b", "gene_name": "TAF15B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K4L7-1", "protein_name": "Transcription initiation factor TFIID subunit 4b", "gene_name": "TAF4B; TAF4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6SJR1-1", "protein_name": "Transcription initiation factor TFIID subunit 4", "gene_name": "TAF4B; TAF4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q940A7-1", "protein_name": "Transcription initiation factor TFIID subunit 12b", "gene_name": "TAF12B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FH40-1", "protein_name": "Transcription initiation factor TFIID subunit 14b", "gene_name": 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"Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9MAU3-1", "protein_name": "Transcription initiation factor TFIID subunit 6", "gene_name": "TAF6", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SYZ9", "url": "https://www.uniprot.org/uniprotkb/Q9SYZ9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15527982", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 21 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 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Biol.", "date": "2007", "authors": "Lawit Shai J, O'Grady Kevin, Gurley William B, Czarnecka-Verner Eva", "reference": { "type": "PubMed", "id": "17340043", "url": "https://pubmed.ncbi.nlm.nih.gov/17340043" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SYZ9-1", "protein_name": "Transcription initiation factor TFIID subunit 8", "gene_name": "TAF8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "B9DG24-1", "protein_name": "Transcription initiation factor TFIID subunit 7", "gene_name": "TAF7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O04173-1", "protein_name": "Transcription initiation factor TFIID subunit 10", "gene_name": "TAF10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SYH2-1", "protein_name": "Transcription initiation factor TFIID subunit 9", "gene_name": "TAF9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SR71-1", "protein_name": "Transcription initiation factor TFIID subunit 12", "gene_name": "TAF12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LPF0-1", "protein_name": "Transcription initiation factor TFIID subunit 2", "gene_name": "TAF2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LRK9-1", "protein_name": "Transcription initiation factor TFIID subunit 1", "gene_name": "TAF1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9AST1-1", "protein_name": "Transcription initiation factor TFIID subunit 15", "gene_name": "TAF15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94KD0-1", "protein_name": "Transcription initiation factor TFIID subunit 15b", "gene_name": "TAF15B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K4L7-1", "protein_name": "Transcription initiation factor TFIID subunit 4b", "gene_name": "TAF4B; TAF4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6SJR1-1", "protein_name": "Transcription initiation factor TFIID subunit 4", "gene_name": "TAF4B; 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"snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 21 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": 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0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The delayed leaf senescence mutants of Arabidopsis, ore1, ore3, and ore9 are tolerant to oxidative stress.", "journal": "Plant Cell Physiol.", "date": "2004", "authors": "Woo Hye Ryun, Kim Jin Hee, Nam Hong Gil, Lim Pyung Ok", "reference": { "type": "PubMed", "id": "15295076", "url": "https://pubmed.ncbi.nlm.nih.gov/15295076" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q38853-1", "protein_name": "Rhodanese-like domain-containing protein 15, chloroplastic", "gene_name": "SEN1; STR15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FKA0-1", "protein_name": "NAC domain-containing protein 92", "gene_name": "NAC92", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": 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Arabidopsis is regulated by signals that link plant defence responses and senescence.", "journal": "Plant Physiol. Biochem.", "date": "2005", "authors": "Schenk Peer M, Kazan Kemal, Rusu Anca G, Manners John M, Maclean Donald J", "reference": { "type": "PubMed", "id": "16325410", "url": "https://pubmed.ncbi.nlm.nih.gov/16325410" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q38853-1", "protein_name": "Rhodanese-like domain-containing protein 15, chloroplastic", "gene_name": "SEN1; STR15", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q38853", "url": "https://www.uniprot.org/uniprotkb/Q38853" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16325410", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Differential expression of Arabidopsis sulfurtransferases under various growth conditions.", "journal": "Plant Physiol. 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Biol.", "date": "1996", "authors": "Oh S A, Lee S Y, Chung I K, Lee C H, Nam H G", "reference": { "type": "PubMed", "id": "8624406", "url": "https://pubmed.ncbi.nlm.nih.gov/8624406" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q38853-1", "protein_name": "Rhodanese-like domain-containing protein 15, chloroplastic", "gene_name": "SEN1; STR15", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q38853", "url": "https://www.uniprot.org/uniprotkb/Q38853" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.8624406", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Genome based identification and analysis of the pre-replicative complex of Arabidopsis thaliana.", "journal": "FEBS Lett.", "date": "2004", "authors": "Masuda H P, Ramos G B A, de Almeida-Engler J, Cabral L M, Coqueiro V M, Macrini C M T, Ferreira P C G, Hemerly A S", "reference": { "type": "PubMed", "id": "15358564", "url": "https://pubmed.ncbi.nlm.nih.gov/15358564" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q6EWX0-1", "protein_name": "Origin of replication complex 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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[] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular cloning of two novel protein kinase genes from Arabidopsis thaliana.", "journal": "Biochim. Biophys. Acta", "date": "1993", "authors": "Moran T V, Walker J C", "reference": { "type": "PubMed", "id": "8218420", "url": "https://pubmed.ncbi.nlm.nih.gov/8218420" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P43294-1", "protein_name": "Serine/threonine-protein kinase MHK", "gene_name": "MHK", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P43293-1", "protein_name": "Probable serine/threonine-protein kinase PBL11", "gene_name": "PBL11", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P43294", "url": "https://www.uniprot.org/uniprotkb/P43294" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.8218420", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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Christian, Menzel Gerhard, Pet\u00e9tot Jean MacDonald-Comber, Rochat-Hacker Sylvie, Poirier Yves", "reference": { "type": "PubMed", "id": "14564522", "url": "https://pubmed.ncbi.nlm.nih.gov/14564522" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q3E9A0-1", "protein_name": "Probable anion transporter 6, chloroplastic", "gene_name": "ANTR6; PHT4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q66GI9-1", "protein_name": "Probable anion transporter 4, chloroplastic", "gene_name": "ANTR4; PHT4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q7XJR2-1", "protein_name": "Probable anion transporter 3, chloroplastic", "gene_name": "ANTR3; PHT4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GX78-1", "protein_name": "Ascorbate transporter, chloroplastic", "gene_name": "4; PHT4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O82390-1", "protein_name": "Sodium-dependent phosphate transport protein 1, chloroplastic", "gene_name": "ANTR1; PHT4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FKV1-1", "protein_name": "Probable anion transporter 5", "gene_name": "ANTR5", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q3E9A0", "url": "https://www.uniprot.org/uniprotkb/Q3E9A0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.14564522", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", 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"tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q7XJR2-1", "protein_name": "Probable anion transporter 3, chloroplastic", "gene_name": "ANTR3; PHT4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GX78-1", "protein_name": "Ascorbate transporter, chloroplastic", "gene_name": "4; PHT4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O82390-1", "protein_name": "Sodium-dependent phosphate transport protein 1, chloroplastic", "gene_name": "ANTR1; PHT4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FKV1-1", "protein_name": "Probable anion transporter 5", "gene_name": "ANTR5", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q3E9A0", "url": "https://www.uniprot.org/uniprotkb/Q3E9A0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.18086223", 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Behav.", "date": "2008", "authors": "Guo Biwei, Irigoyen Sonia, Fowler Tiffany B, Versaw Wayne K", "reference": { "type": "PubMed", "id": "19513231", "url": "https://pubmed.ncbi.nlm.nih.gov/19513231" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q3E9A0-1", "protein_name": "Probable anion transporter 6, chloroplastic", "gene_name": "ANTR6; PHT4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q66GI9-1", "protein_name": "Probable anion transporter 4, chloroplastic", "gene_name": "ANTR4; PHT4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q7XJR2-1", "protein_name": "Probable anion transporter 3, chloroplastic", "gene_name": "ANTR3; PHT4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GX78-1", "protein_name": "Ascorbate transporter, chloroplastic", "gene_name": "4; PHT4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O82390-1", "protein_name": "Sodium-dependent phosphate transport protein 1, chloroplastic", "gene_name": "ANTR1; PHT4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FKV1-1", "protein_name": "Probable anion transporter 5", "gene_name": "ANTR5", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q3E9A0", "url": "https://www.uniprot.org/uniprotkb/Q3E9A0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.19513231", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", 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Evol.", "date": "2009", "authors": "Caicedo Ana L, Richards Christina, Ehrenreich Ian M, Purugganan Michael D", "reference": { "type": "PubMed", "id": "19139056", "url": "https://pubmed.ncbi.nlm.nih.gov/19139056" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q683D7-1", "protein_name": "Protein MADS AFFECTING FLOWERING 5", "gene_name": "MAF5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSR7-1", "protein_name": "Agamous-like MADS-box protein AGL70", "gene_name": "AGL70; MAF3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FPN7-1", "protein_name": "Agamous-like MADS-box protein AGL31", "gene_name": "AGL31", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q683D7", "url": "https://www.uniprot.org/uniprotkb/Q683D7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana 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Biol.", "date": "2007", "authors": "Jiang Shiling, Li Ming, Xu Tao, Ren Dongtao, Liu Guoqin", "reference": { "type": "PubMed", "id": "17244481", "url": "https://pubmed.ncbi.nlm.nih.gov/17244481" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P46875-1", "protein_name": "Kinesin-like protein KIN-14N", "gene_name": "ATK3; KIN14N", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P46864-1", "protein_name": "Kinesin-like protein KIN-14M", "gene_name": "KIN14M", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P46875", "url": "https://www.uniprot.org/uniprotkb/P46875" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.17244481", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Functional divergence of the duplicated AtKIN14a and AtKIN14b genes: critical roles in Arabidopsis meiosis and gametophyte development.", "journal": "Plant J.", "date": "2008", "authors": "Quan Li, Xiao Rong, Li Wuxing, Oh Sung-Aeong, Kong Hongzhi, Ambrose J Christian, Malcos Jennelle L, Cyr Richard, Twell David, Ma Hong", "reference": { "type": "PubMed", "id": "18088313", "url": "https://pubmed.ncbi.nlm.nih.gov/18088313" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P46875-1", "protein_name": "Kinesin-like protein KIN-14N", "gene_name": "ATK3; 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Biol.", "date": "1994", "authors": "Mitsui H, Nakatani K, Yamaguchi-Shinozaki K, Shinozaki K, Nishikawa K, Takahashi H", "reference": { "type": "PubMed", "id": "8075402", "url": "https://pubmed.ncbi.nlm.nih.gov/8075402" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P46875-1", "protein_name": "Kinesin-like protein KIN-14N", "gene_name": "ATK3; KIN14N", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P46864-1", "protein_name": "Kinesin-like protein KIN-14M", "gene_name": "KIN14M", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P46875", "url": "https://www.uniprot.org/uniprotkb/P46875" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.8075402", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of a gene family (kat) encoding kinesin-like proteins in Arabidopsis thaliana and the characterization of secondary structure of KatA.", "journal": "Mol. Gen. Genet.", "date": "1993", "authors": "Mitsui H, Yamaguchi-Shinozaki K, Shinozaki K, Nishikawa K, Takahashi H", "reference": { "type": "PubMed", "id": "8492804", "url": "https://pubmed.ncbi.nlm.nih.gov/8492804" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P46875-1", "protein_name": "Kinesin-like protein KIN-14N", "gene_name": "ATK3; KIN14N", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P46864-1", "protein_name": "Kinesin-like protein KIN-14M", "gene_name": "KIN14M", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81635-1", "protein_name": "Kinesin-like protein KIN-14G", "gene_name": "KIN14G", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q07970-1", "protein_name": "Kinesin-like protein KIN-14C", "gene_name": "KIN14C", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P46875", "url": "https://www.uniprot.org/uniprotkb/P46875" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.8492804", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Beta-AMYLASE4, a noncatalytic protein required for starch breakdown, acts upstream of three active beta-amylases in Arabidopsis chloroplasts.", "journal": "Plant Cell", "date": "2008", "authors": "Fulton Daniel C, Stettler Michaela, Mettler Tabea, Vaughan Cara K, Li Jing, Francisco Perigio, Gil Manuel, Reinhold Heike, Eicke Simona, Messerli Ga\u00eblle, Dorken Gary, Halliday Karen, Smith Alison M, Smith Steven M, Zeeman Samuel C", "reference": { "type": "PubMed", "id": "18390594", "url": "https://pubmed.ncbi.nlm.nih.gov/18390594" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FH80-1", "protein_name": "Beta-amylase 8", "gene_name": "BAM8; 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Biol.", "date": "2000", "authors": "Pujol G, Baskin T I, Casamayor A, Cortadellas N, Ferrer A, Ari\u00f1o J", "reference": { "type": "PubMed", "id": "11197325", "url": "https://pubmed.ncbi.nlm.nih.gov/11197325" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P48528-1", "protein_name": "Serine/threonine-protein phosphatase PP-X isozyme 2", "gene_name": "PPX2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P48529-1", "protein_name": "Serine/threonine-protein phosphatase PP-X isozyme 1", "gene_name": "PPX1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P48528", "url": "https://www.uniprot.org/uniprotkb/P48528" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11197325", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arabidopsis PPP family of serine/threonine phosphatases.", "journal": "Trends Plant Sci.", "date": "2007", "authors": "Farkas Ilona, Dombr\u00e1di Viktor, Miskei M\u00e1rton, Szabados L\u00e1szl\u00f3, Koncz Csaba", "reference": { "type": "PubMed", "id": "17368080", "url": "https://pubmed.ncbi.nlm.nih.gov/17368080" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P48528-1", "protein_name": "Serine/threonine-protein phosphatase PP-X isozyme 2", "gene_name": "PPX2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P48485-1", "protein_name": "Serine/threonine-protein phosphatase PP1 isozyme 5", "gene_name": "TOPP5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q07099-1", "protein_name": "Serine/threonine-protein phosphatase PP2A-1 catalytic subunit", "gene_name": "PP2A1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O04951-1", "protein_name": "Serine/threonine-protein phosphatase PP2A-5 catalytic subunit", "gene_name": "PP2A5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LNG5-1", "protein_name": "Serine/threonine-protein phosphatase 7 long form homolog", "gene_name": "MAIL3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SHS7-1", "protein_name": "Serine/threonine-protein phosphatase BSL3", "gene_name": "BSL3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84XU2-1", "protein_name": "Serine/threonine-protein phosphatase 5", "gene_name": "PAPP5; PP5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L7U5-1", "protein_name": "Serine/threonine-protein phosphatase BSL1", "gene_name": "BSL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LR78-1", "protein_name": "Serine/threonine-protein phosphatase BSU1", "gene_name": "BSU1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O82734-1", "protein_name": "Serine/threonine-protein phosphatase PP1 isozyme 8", "gene_name": "TOPP8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O82733-1", "protein_name": "Serine/threonine-protein phosphatase PP1 isozyme 7", "gene_name": "TOPP7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P30366-1", "protein_name": "Serine/threonine-protein phosphatase PP1 isozyme 1", "gene_name": "TOPP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P48486-1", "protein_name": "Serine/threonine-protein phosphatase PP1 isozyme 6", "gene_name": "TOPP6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93YV6-1", "protein_name": "Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform", "gene_name": "B'KAPPA", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FN02-1", "protein_name": "Serine/threonine-protein phosphatase 7", "gene_name": "PP7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LHE7-1", "protein_name": "Phytochrome-associated serine/threonine-protein phosphatase 3", "gene_name": "FYPP3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LEV0-1", "protein_name": "Serine/threonine-protein phosphatase 7 inactive homolog", "gene_name": "PP7L", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q07100-1", "protein_name": "Serine/threonine-protein phosphatase PP2A-3 catalytic subunit", "gene_name": "PP2A-3; 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"PP2A2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M9W3-1", "protein_name": "Serine/threonine-protein phosphatase PP1 isozyme 9", "gene_name": "TOPP9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJF0-1", "protein_name": "Serine/threonine-protein phosphatase BSL2", "gene_name": "BSL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SX52-1", "protein_name": "Phytochrome-associated serine/threonine-protein phosphatase 1", "gene_name": "FYPP1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P48528", "url": "https://www.uniprot.org/uniprotkb/P48528" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.17368080", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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Biol.", "date": "1993", "authors": "P\u00e9rez-Callej\u00f3n E, Casamayor A, Pujol G, Clua E, Ferrer A, Ari\u00f1o J", "reference": { "type": "PubMed", "id": "8292782", "url": "https://pubmed.ncbi.nlm.nih.gov/8292782" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P48528-1", "protein_name": "Serine/threonine-protein phosphatase PP-X isozyme 2", "gene_name": "PPX2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P48529-1", "protein_name": "Serine/threonine-protein phosphatase PP-X isozyme 1", "gene_name": "PPX1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P48528", "url": "https://www.uniprot.org/uniprotkb/P48528" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.8292782", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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}, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Volatile C6-aldehydes and allo-ocimene activate defense genes and induce resistance against Botrytis cinerea in Arabidopsis thaliana.", "journal": "Plant Cell Physiol.", "date": "2005", "authors": "Kishimoto Kyutaro, Matsui Kenji, Ozawa Rika, Takabayashi Junji", "reference": { "type": "PubMed", "id": "15879447", 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Biol.", "date": "1996", "authors": "Katagiri T, Mizoguchi T, Shinozaki K", "reference": { "type": "PubMed", "id": "8605313", "url": "https://pubmed.ncbi.nlm.nih.gov/8605313" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q39017-1", "protein_name": "Diacylglycerol kinase 1", "gene_name": "DGK1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q39017", "url": "https://www.uniprot.org/uniprotkb/Q39017" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.8605313", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { 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cress" }, { "uniprot_canonical_ac": "Q08891-1", "protein_name": "Fatty acyl-CoA reductase 2, chloroplastic", "gene_name": "FAR2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93ZB9-1", "protein_name": "Fatty acyl-CoA reductase 3", "gene_name": "CER4; FAR3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q1PEI6-1", "protein_name": "Fatty acyl-CoA reductase 8", "gene_name": "FAR8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "B9TSP7-1", "protein_name": "Fatty acyl-CoA reductase 6, chloroplastic", "gene_name": "FAR6", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q39152", "url": "https://www.uniprot.org/uniprotkb/Q39152" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.19062129", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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}, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The Arabidopsis MALE STERILITY 2 protein shares similarity with reductases in elongation/condensation complexes.", "journal": "Plant J.", "date": "1997", "authors": "Aarts M G, Hodge R, Kalantidis K, Florack D, Wilson Z A, Mulligan B J, Stiekema W J, Scott R, Pereira A", "reference": { "type": "PubMed", "id": 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Plant Sci.", "date": "2022", "authors": "Stahl Elia, Fernandez Martin Angel, Glauser Ga\u00e9tan, Guillou Marie-Charlotte, Aubourg S\u00e9bastien, Renou Jean-Pierre, Reymond Philippe", "reference": { "type": "PubMed", "id": "35401621", "url": "https://pubmed.ncbi.nlm.nih.gov/35401621" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q3E8H4-1", "protein_name": "Serine rich endogenous peptide 1", "gene_name": "PROSCOOP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q56WV9-1", "protein_name": "Serine rich endogenous peptide 5", "gene_name": "PROSCOOP5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WML3-1", "protein_name": "Serine rich endogenous peptide 6", "gene_name": "PROSCOOP6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZG8-1", "protein_name": "MDIS1-interacting receptor like kinase 2", "gene_name": "MIK2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A0A1P8BDL3-1", "protein_name": "Serine rich endogenous peptide 2", "gene_name": "PROSCOOP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A8MS31-1", "protein_name": "Serine rich endogenous peptide 7", "gene_name": "PROSCOOP7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0DO60-1", "protein_name": "Serine rich endogenous peptide 3", "gene_name": "PROSCOOP3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GWN6-1", "protein_name": "Serine rich endogenous peptide 8", "gene_name": "PROSCOOP8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q570K8-1", "protein_name": "Serine rich endogenous peptide 4", "gene_name": "PROSCOOP4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "B3H7I1-1", "protein_name": "Serine rich endogenous peptide 12", "gene_name": "PROSCOOP12", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q3E8H4", "url": 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methyltransferase gene in Arabidopsis produces two transcripts whose products are sequestered in the nucleus.", "journal": "Plant physiology", "date": "2004-09", "authors": "Xu Qilong, Belcastro Marisa P, Villa Sarah T, Dinkins Randy D, Clarke Steven G, Downie A Bruce", "reference": { "type": "PubMed", "id": "15347786", "url": "https://pubmed.ncbi.nlm.nih.gov/15347786" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q64J17-1", "protein_name": "Protein-L-isoaspartate O-methyltransferase 2", "gene_name": "PIMT2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q42539-1", "protein_name": "Protein-L-isoaspartate O-methyltransferase 1", "gene_name": "PIMT1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q64J17", "url": "https://www.uniprot.org/uniprotkb/Q64J17" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "mutagenesis": [ { "start_pos": 23, "end_pos": 24, "sequence_org": "KK", "sequence_mut": "RR", "comment": "Loss of nuclear targeting.", "evidence": [ { "database": "UniProtKB", "id": "Q64J17", "url": "https://www.uniprot.org/uniprotkb/Q64J17" }, { "database": "PubMed", "id": "15347786", "url": "https://pubmed.ncbi.nlm.nih.gov/15347786" } ], "uniprot_canonical_ac": "Q64J17-1" } ], "record_id": "pubmed.15347786", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arabidopsis Protein Repair L-Isoaspartyl Methyltransferases: Predominant Activities at Lethal Temperatures.", "journal": "Physiologia plantarum", "date": "2006-12", "authors": "Villa Sarah T, Xu Qilong, Downie A Bruce, Clarke Steven G", "reference": { "type": "PubMed", "id": "21076691", "url": "https://pubmed.ncbi.nlm.nih.gov/21076691" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q64J17-1", "protein_name": "Protein-L-isoaspartate O-methyltransferase 2", "gene_name": "PIMT2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q42539-1", "protein_name": "Protein-L-isoaspartate O-methyltransferase 1", "gene_name": "PIMT1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "AtMGT7: An Arabidopsis gene encoding a low-affinity magnesium transporter.", "journal": "Journal of integrative plant biology", "date": "2008-12", "authors": "Mao Dan-Dan, Tian Lian-Fu, Li Le-Gong, Chen Jian, Deng Pei-Yi, Li Dong-Ping, Luan Sheng", "reference": { "type": "PubMed", "id": "19093971", "url": "https://pubmed.ncbi.nlm.nih.gov/19093971" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q304A0-1", "protein_name": "Magnesium transporter MRS2-7", "gene_name": "MGT7; MRS2-7", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q304A0", "url": "https://www.uniprot.org/uniprotkb/Q304A0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.19093971", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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Acta", "date": "1994", "authors": "Luethy M H, Miernyk J A, Randall D D", "reference": { "type": "PubMed", "id": "8061040", "url": "https://pubmed.ncbi.nlm.nih.gov/8061040" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q38799-1", "protein_name": "Pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial", "gene_name": "PDH2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q38799", "url": "https://www.uniprot.org/uniprotkb/Q38799" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.8061040", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A distinct type of cyclin D, CYCD4;2, involved in the activation of cell division in Arabidopsis.", "journal": "Plant cell reports", "date": "2006-06", "authors": "Kono Atsushi, Ohno Ryoko, Umeda-Hara Chikage, Uchimiya Hirofumi, Umeda Masaaki", "reference": { "type": "PubMed", "id": "16408177", "url": "https://pubmed.ncbi.nlm.nih.gov/16408177" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q0WQN9-1", "protein_name": "Cyclin-D4-2", "gene_name": "CYCD4-2; 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Biochem.", "date": "2010", "authors": "Naka Yukie, Watanabe Kanako, Sagor G H M, Niitsu Masaru, Pillai M Arumugam, Kusano Tomonobu, Takahashi Yoshihiro", "reference": { "type": "PubMed", "id": "20137962", "url": "https://pubmed.ncbi.nlm.nih.gov/20137962" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q94BN2-1", "protein_name": "Spermine synthase", "gene_name": "SPDS3; SPMS", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S7X6-1", "protein_name": "Thermospermine synthase ACL5", "gene_name": "ACL5", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q94BN2", "url": "https://www.uniprot.org/uniprotkb/Q94BN2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.20137962", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Conservation of the human breast basic conserved 1 gene in the plant kingdom: characterization of a cDNA clone from Arabidopsis thaliana.", "journal": "Gene", "date": "1994", "authors": "Bertauche N, Leung J, Giraudat J", "reference": { "type": "PubMed", "id": "8163191", "url": "https://pubmed.ncbi.nlm.nih.gov/8163191" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P41127-1", "protein_name": "Large ribosomal subunit protein eL13z", "gene_name": "BBC1; 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Natl. Acad. Sci. U.S.A.", "date": "1992", "authors": "Cerutti H, Osman M, Grandoni P, Jagendorf A T", "reference": { "type": "PubMed", "id": "1518831", "url": "https://pubmed.ncbi.nlm.nih.gov/1518831" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q39199-1", "protein_name": "DNA repair protein recA homolog 1, chloroplastic", "gene_name": "RECA1; RECA", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q39199", "url": "https://www.uniprot.org/uniprotkb/Q39199" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.1518831", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Genomic nucleotide sequence of a gene from Arabidopsis thaliana encoding a protein homolog of Escherichia coli RecA.", "journal": "Plant Physiol.", "date": "1993", "authors": "Binet M N, Osman M, Jagendorf A T", "reference": { "type": "PubMed", "id": "8029344", "url": "https://pubmed.ncbi.nlm.nih.gov/8029344" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q39199-1", "protein_name": "DNA repair protein recA homolog 1, chloroplastic", "gene_name": "RECA1; 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Biol.", "date": "1993", "authors": "Kaldenhoff R, K\u00f6lling A, Richter G", "reference": { "type": "PubMed", "id": "8292783", "url": "https://pubmed.ncbi.nlm.nih.gov/8292783" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q06611-1", "protein_name": "Aquaporin PIP1-2", "gene_name": "PIP1-2; PIP1B", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q06611", "url": "https://www.uniprot.org/uniprotkb/Q06611" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.8292783", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Nucleotide sequence of an Arabidopsis thaliana turgor-responsive cDNA clone encoding TMP-A, a transmembrane protein containing the major intrinsic protein motif.", "journal": "Plant Physiol.", "date": "1993", "authors": "Shagan T, Bar-Zvi D", "reference": { "type": "PubMed", "id": "8310069", "url": "https://pubmed.ncbi.nlm.nih.gov/8310069" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q06611-1", "protein_name": "Aquaporin PIP1-2", "gene_name": "PIP1-2; 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