[ { "title": "The mammalian proteins MMS19, MIP18, and ANT2 are involved in cytoplasmic iron-sulfur cluster protein assembly.", "journal": "The Journal of biological chemistry", "date": "2012", "authors": "van Wietmarschen N, Moradian A, Morin GB, Lansdorp PM, Uringa EJ", "reference": { "type": "PubMed", "id": "23150669", "url": "https://pubmed.ncbi.nlm.nih.gov/23150669" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P28340-1", "protein_name": "DNA polymerase delta catalytic subunit", "gene_name": "POLD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5Y2-1", "protein_name": "Cytosolic Fe-S cluster assembly factor NUBP2", "gene_name": "NUBP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI81-1", "protein_name": "Anamorsin", "gene_name": "CIAPIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHB4-1", "protein_name": "NADPH-dependent diflavin oxidoreductase 1", "gene_name": "NDOR1", "tax_name": "Human" }, { "uniprot_canonical_ac": 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Y, Fulford J, McCulloch LJ, Savage DB, O'Rahilly S, Kos K, Loeb LA, Semple RK, Hattersley AT", "reference": { "type": "PubMed", "id": "23770608", "url": "https://pubmed.ncbi.nlm.nih.gov/23770608" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P28340-1", "protein_name": "DNA polymerase delta catalytic subunit", "gene_name": "POLD1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P28340", "url": "https://www.uniprot.org/uniprotkb/P28340" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.23770608", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { 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"date": "2001", "authors": "de Santa Barbara P, Mejean C, Moniot B, Malcles MH, Berta P, Boizet-Bonhoure B", "reference": { "type": "PubMed", "id": "11207191", "url": "https://pubmed.ncbi.nlm.nih.gov/11207191" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O43323-1", "protein_name": "Desert hedgehog protein", "gene_name": "DHH", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43694-1", "protein_name": "Transcription factor GATA-4", "gene_name": "GATA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P03971-1", "protein_name": "Anti-Muellerian hormone", "gene_name": "AMH", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41222-1", "protein_name": "Prostaglandin-H2 D-isomerase", "gene_name": "PTGDS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48436-1", "protein_name": "Transcription factor SOX-9", "gene_name": "SOX9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R6-1", "protein_name": "Doublesex- and mab-3-related transcription 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"Human" }, { "uniprot_canonical_ac": "P31371-1", "protein_name": "Fibroblast growth factor 9", "gene_name": "FGF9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WW38-1", "protein_name": "Zinc finger protein ZFPM2", "gene_name": "ZFPM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13285-1", "protein_name": "Steroidogenic factor 1", "gene_name": "NR5A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q05066-1", "protein_name": "Sex-determining region Y protein", "gene_name": "SRY", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O43323", "url": "https://www.uniprot.org/uniprotkb/O43323" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11278460", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ 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patients with 46,XY complete pure gonadal dysgenesis.", "journal": "The Journal of clinical endocrinology and metabolism", "date": "2004", "authors": "Canto P, Soderlund D, Reyes E, Mendez JP", "reference": { "type": "PubMed", "id": "15356051", "url": "https://pubmed.ncbi.nlm.nih.gov/15356051" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O43323-1", "protein_name": "Desert hedgehog protein", "gene_name": "DHH", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15465-1", "protein_name": "Sonic hedgehog protein", "gene_name": "SHH", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VTY9-1", "protein_name": "Protein-cysteine N-palmitoyltransferase HHAT", "gene_name": "HHAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14623-1", "protein_name": "Indian hedgehog protein", "gene_name": "IHH", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O43323", "url": 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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mutations in Desert hedgehog gene in patients with 46,XY complete gonadal dysgenesis and prediction of its structural and functional implications by computational methods.", "journal": "European journal of medical genetics", "date": "2011", "authors": "Das DK, Sanghavi D, Gawde H, Idicula-Thomas S, Vasudevan L", "reference": { "type": "PubMed", "id": "21816240", "url": "https://pubmed.ncbi.nlm.nih.gov/21816240" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O43323-1", "protein_name": "Desert hedgehog protein", "gene_name": "DHH", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15465-1", "protein_name": "Sonic hedgehog protein", "gene_name": "SHH", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VTY9-1", "protein_name": "Protein-cysteine N-palmitoyltransferase HHAT", "gene_name": "HHAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14623-1", "protein_name": "Indian hedgehog protein", "gene_name": "IHH", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O43323", "url": "https://www.uniprot.org/uniprotkb/O43323" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.21816240", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "Analysis of meiosis regulators in human gonads: a sexually dimorphic spatio-temporal expression pattern suggests involvement of DMRT1 in meiotic entry.", "journal": "Molecular human reproduction", "date": "2012", "authors": "Jorgensen A, Nielsen JE, Blomberg Jensen M, Graem N, Rajpert-De Meyts E", "reference": { "type": "PubMed", "id": "22899867", "url": "https://pubmed.ncbi.nlm.nih.gov/22899867" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O43323-1", "protein_name": "Desert hedgehog protein", "gene_name": "DHH", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43694-1", "protein_name": "Transcription factor GATA-4", "gene_name": "GATA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P03971-1", "protein_name": "Anti-Muellerian hormone", "gene_name": "AMH", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41222-1", "protein_name": "Prostaglandin-H2 D-isomerase", "gene_name": "PTGDS", 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new role for Hedgehogs in juxtacrine signaling.", "journal": "Mechanisms of development", "date": "2014", "authors": "Pettigrew CA, Asp E, Emerson CP Jr", "reference": { "type": "PubMed", "id": "24342078", "url": "https://pubmed.ncbi.nlm.nih.gov/24342078" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O43323-1", "protein_name": "Desert hedgehog protein", "gene_name": "DHH", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15465-1", "protein_name": "Sonic hedgehog protein", "gene_name": "SHH", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14623-1", "protein_name": "Indian hedgehog protein", "gene_name": "IHH", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O43323", "url": "https://www.uniprot.org/uniprotkb/O43323" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.24342078", "abstract": "", 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L, Schroder T, Reiz B, Kavran JM, Baumer T, Capetian P, Hiort O", "reference": { "type": "PubMed", "id": "25927242", "url": "https://pubmed.ncbi.nlm.nih.gov/25927242" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O43323-1", "protein_name": "Desert hedgehog protein", "gene_name": "DHH", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O43323", "url": "https://www.uniprot.org/uniprotkb/O43323" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.25927242", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { 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Clin. Transl. Neurol.", "date": "2017", "authors": "Tsuji S., Shimizu J., Ishiura H., Mitsui J., Goto J., Sugie K., Tate G., Shiio Y., Maekawa R., Naruse H., Sato N.S., Tokushige S.I.", "reference": { "type": "PubMed", "id": "28589169", "url": "https://pubmed.ncbi.nlm.nih.gov/28589169" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O43323-1", "protein_name": "Desert hedgehog protein", "gene_name": "DHH", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O43323", "url": "https://www.uniprot.org/uniprotkb/O43323" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.28589169", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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novel DHH mutations p.(Asn337Lysfs*24) and p.(Glu212Lys) associated with gonadal dysgenesis.", "journal": "Human mutation", "date": "2018", "authors": "Tajouri A, Kharrat M, Hizem S, Zaghdoudi H, M'rad R, Simic-Schleicher G, Kaiser FJ, Hiort O, Werner R", "reference": { "type": "PubMed", "id": "30298535", "url": "https://pubmed.ncbi.nlm.nih.gov/30298535" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O43323-1", "protein_name": "Desert hedgehog protein", "gene_name": "DHH", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O43323", "url": "https://www.uniprot.org/uniprotkb/O43323" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.30298535", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", 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[] } ] }, { "title": "New genes associated with rheumatoid arthritis identified by gene expression profiling.", "journal": "International journal of immunogenetics", "date": "2017", "authors": "Wang H, Guo J, Jiang J, Wu W, Chang X, Zhou H, Li Z, Zhao J", "reference": { "type": "PubMed", "id": "28371410", "url": "https://pubmed.ncbi.nlm.nih.gov/28371410" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O75911-1", "protein_name": "Short-chain dehydrogenase/reductase 3", "gene_name": "DHRS3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5R3I4-1", "protein_name": "Tetratricopeptide repeat protein 38", "gene_name": "TTC38", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O75911", "url": "https://www.uniprot.org/uniprotkb/O75911" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.28371410", "abstract": "", 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"uniprot_canonical_ac": "Q14442-1", "protein_name": "Phosphatidylinositol N-acetylglucosaminyltransferase subunit H", "gene_name": "PIGH", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NUD9-1", "protein_name": "GPI alpha-1,6-mannosyltransferase 2", "gene_name": "PIGV", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VD9-1", "protein_name": "GPI alpha-1,2-mannosyltransferase 4", "gene_name": "PIGZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95427-1", "protein_name": "GPI ethanolamine phosphate transferase 1", "gene_name": "PIGN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z7B1-1", "protein_name": "Glucosaminyl-phosphatidylinositol-acyltransferase PIGW", "gene_name": "PIGW", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57054-1", "protein_name": "Phosphatidylinositol N-acetylglucosaminyltransferase subunit P", "gene_name": "PIGP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEQ8-1", "protein_name": "GPI ethanolamine phosphate transferase 3, catalytic subunit", "gene_name": "PIGO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7TSN4-1", "protein_name": "Glucosaminyl-phosphatidylinositol-acyltransferase PIGW", "gene_name": "Pigw", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q9Y2B2-1", "protein_name": "N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase", "gene_name": "PIGL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92521-1", "protein_name": "GPI alpha-1,2-mannosyltransferase 3", "gene_name": "PIGB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07326-1", "protein_name": "GPI ethanolamine phosphate transferase, stabilizing subunit", "gene_name": "PIGF", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3MUY2-1", "protein_name": "Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y", "gene_name": "PIGY", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O94777", "url": "https://www.uniprot.org/uniprotkb/O94777" 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"glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Subcellular localization and targeting of N-acetylglucosaminyl phosphatidylinositol de-N-acetylase, the second enzyme in the glycosylphosphatidylinositol biosynthetic pathway.", "journal": "The Journal of biological chemistry", "date": "2004", "authors": "Pottekat A, Menon AK", "reference": { "type": "PubMed", "id": "14742432", "url": "https://pubmed.ncbi.nlm.nih.gov/14742432" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O94777-1", "protein_name": "Dolichol phosphate-mannose biosynthesis regulatory protein", "gene_name": "DPM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P37287-1", "protein_name": "Phosphatidylinositol N-acetylglucosaminyltransferase subunit A", "gene_name": "PIGA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5H8A4-1", "protein_name": "GPI ethanolamine phosphate transferase 2, catalytic subunit", "gene_name": "PIGG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBF5-1", "protein_name": "GPI alpha-1,4-mannosyltransferase I, stabilizing subunit", "gene_name": "PIGX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92535-1", "protein_name": "Phosphatidylinositol N-acetylglucosaminyltransferase subunit C", "gene_name": "PIGC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H3S5-1", "protein_name": "GPI alpha-1,4-mannosyltransferase I, catalytic subunit", "gene_name": "PIGM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14442-1", "protein_name": "Phosphatidylinositol N-acetylglucosaminyltransferase subunit H", "gene_name": "PIGH", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NUD9-1", "protein_name": "GPI alpha-1,6-mannosyltransferase 2", "gene_name": "PIGV", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VD9-1", "protein_name": "GPI alpha-1,2-mannosyltransferase 4", "gene_name": "PIGZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95427-1", "protein_name": "GPI ethanolamine phosphate transferase 1", "gene_name": "PIGN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z7B1-1", "protein_name": "Glucosaminyl-phosphatidylinositol-acyltransferase PIGW", "gene_name": "PIGW", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57054-1", "protein_name": "Phosphatidylinositol N-acetylglucosaminyltransferase subunit P", "gene_name": "PIGP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEQ8-1", "protein_name": "GPI ethanolamine phosphate transferase 3, catalytic subunit", "gene_name": "PIGO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2B2-1", "protein_name": "N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase", "gene_name": "PIGL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92521-1", "protein_name": "GPI alpha-1,2-mannosyltransferase 3", "gene_name": "PIGB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07326-1", "protein_name": "GPI ethanolamine phosphate transferase, stabilizing subunit", "gene_name": "PIGF", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3MUY2-1", "protein_name": "Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y", "gene_name": "PIGY", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O94777", "url": "https://www.uniprot.org/uniprotkb/O94777" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.14742432", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 17 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "PIG-V involved in transferring the second mannose in glycosylphosphatidylinositol.", "journal": "The Journal of biological chemistry", "date": "2005", "authors": "Kang JY, Hong Y, Ashida H, Shishioh N, Murakami Y, Morita YS, Maeda Y, Kinoshita T", "reference": { "type": "PubMed", "id": "15623507", "url": "https://pubmed.ncbi.nlm.nih.gov/15623507" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O94777-1", "protein_name": "Dolichol phosphate-mannose biosynthesis regulatory protein", "gene_name": "DPM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38211-1", "protein_name": "GPI mannosyltransferase 2", "gene_name": "GPI18", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P37287-1", "protein_name": "Phosphatidylinositol N-acetylglucosaminyltransferase subunit A", "gene_name": "PIGA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5H8A4-1", "protein_name": "GPI ethanolamine phosphate transferase 2, catalytic 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"O95427-1", "protein_name": "GPI ethanolamine phosphate transferase 1", "gene_name": "PIGN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z7B1-1", "protein_name": "Glucosaminyl-phosphatidylinositol-acyltransferase PIGW", "gene_name": "PIGW", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57054-1", "protein_name": "Phosphatidylinositol N-acetylglucosaminyltransferase subunit P", "gene_name": "PIGP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEQ8-1", "protein_name": "GPI ethanolamine phosphate transferase 3, catalytic subunit", "gene_name": "PIGO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2B2-1", "protein_name": "N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase", "gene_name": "PIGL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92521-1", "protein_name": "GPI alpha-1,2-mannosyltransferase 3", "gene_name": "PIGB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07326-1", "protein_name": "GPI ethanolamine phosphate transferase, stabilizing subunit", "gene_name": "PIGF", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3MUY2-1", "protein_name": "Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y", "gene_name": "PIGY", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5KR61-1", "protein_name": "GPI alpha-1,6-mannosyltransferase 2", "gene_name": "Pigv", "tax_name": "Rat" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O94777", "url": "https://www.uniprot.org/uniprotkb/O94777" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 293, "end_pos": 294, "sequence_org": "PP", "sequence_mut": "TA", "comment": "N-glycosylated due to the creation of an acceptor site for N-glycosylation.", "evidence": [ { "database": "UniProtKB", "id": "Q9NUD9", "url": "https://www.uniprot.org/uniprotkb/Q9NUD9" }, { "database": "PubMed", "id": "15623507", "url": 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Int.", "date": "2012", "authors": "Kotzamani Dimitra, Plaitakis Andreas", "reference": { "type": "PubMed", "id": "22709669", "url": "https://pubmed.ncbi.nlm.nih.gov/22709669" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P49448-1", "protein_name": "Glutamate dehydrogenase 2, mitochondrial", "gene_name": "GLUD2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P49448", "url": "https://www.uniprot.org/uniprotkb/P49448" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.22709669", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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Cell. Proteomics", "date": "2007", "authors": "Rincon E, Santos T, Avila-Flores A, Albar JP, Lalioti V, Lei C, Hong W, Merida I", "reference": { "type": "PubMed", "id": "17351151", "url": "https://pubmed.ncbi.nlm.nih.gov/17351151" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q13574-2", "protein_name": "Diacylglycerol kinase zeta", "gene_name": "DGKZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3UHD6-1", "protein_name": "Sorting nexin-27", "gene_name": "Snx27", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q96L92-1", "protein_name": "Sorting nexin-27", "gene_name": "SNX27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8K4V4-1", "protein_name": "Sorting nexin-27", "gene_name": "Snx27", "tax_name": "Rat" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q13574", "url": "https://www.uniprot.org/uniprotkb/Q13574" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": 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"The Journal of biological chemistry", "date": "2009-11-06", "authors": "Lung Michael, Shulga Yulia V, Ivanova Pavlina T, Myers David S, Milne Stephen B, Brown H Alex, Topham Matthew K, Epand Richard M", "reference": { "type": "PubMed", "id": "19744926", "url": "https://pubmed.ncbi.nlm.nih.gov/19744926" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q13574-2", "protein_name": "Diacylglycerol kinase zeta", "gene_name": "DGKZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9R1C6-1", "protein_name": "Diacylglycerol kinase epsilon", "gene_name": "Dgke", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P52429-1", "protein_name": "Diacylglycerol kinase epsilon", "gene_name": "DGKE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q13574", "url": "https://www.uniprot.org/uniprotkb/Q13574" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens 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"glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "DUOXA1-mediated ROS production promotes cisplatin resistance by activating ATR-Chk1 pathway in ovarian cancer.", "journal": "Cancer letters", "date": "2018", "authors": "Meng Y, Chen CW, Yung MMH, Sun W, Sun J, Li Z, Li J, Li Z, Zhou W, Liu SS, Cheung ANY, Ngan HYS, Braisted JC, Kai Y, Peng W, Tzatsos A, Li Y, Dai Z, Zheng W, Chan DW, Zhu W", "reference": { "type": "PubMed", "id": "29704517", "url": "https://pubmed.ncbi.nlm.nih.gov/29704517" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q1HG43-1", "protein_name": "Dual oxidase maturation factor 1", "gene_name": "DUOXA1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q1HG43", "url": "https://www.uniprot.org/uniprotkb/Q1HG43" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.29704517", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": 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