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Biol.", "date": "2011", "authors": "Kim Hyun-Taek, So Ju-Hoon, Jung Seung-Hyun, Ahn Dae-Gwon, Koh Wansoo, Kim Nam-Soon, Kim Soo-Hyun, Lee Soojin, Kim Cheol-Hee", "reference": { "type": "PubMed", "id": "21838932", "url": "https://pubmed.ncbi.nlm.nih.gov/21838932" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A0R4IXK5-1", "protein_name": "Centromere protein W isoform 1", "gene_name": "cenpw", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0A0R4IXK5", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IXK5" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.21838932", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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Genet.", "date": "2011", "authors": "Bachmann-Gagescu Ruxandra, Phelps Ian G, Stearns George, Link Brian A, Brockerhoff Susan E, Moens Cecilia B, Doherty Dan", "reference": { "type": "PubMed", "id": "21816947", "url": "https://pubmed.ncbi.nlm.nih.gov/21816947" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A0R4IVS5-1", "protein_name": "Alpha-mannosidase", "gene_name": "man2a1", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0A0R4IVS5", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IVS5" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.21816947", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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Open", "date": "2017", "authors": "Bergen Dylan J M, Stevenson Nicola L, Skinner Roderick E H, Stephens David J, Hammond Christina L", "reference": { "type": "PubMed", "id": "28546340", "url": "https://pubmed.ncbi.nlm.nih.gov/28546340" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A0R4IVS5-1", "protein_name": "Alpha-mannosidase", "gene_name": "man2a1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A2CEB4-1", "protein_name": "Golgin subfamily A member 3", "gene_name": "golga3", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M1P007-1", "protein_name": "Thyroid receptor-interacting protein 11", "gene_name": "trip11", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1REB9-1", "protein_name": "TATA element modulatory factor", "gene_name": "tmf1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q7T320-1", "protein_name": "RAB6-interacting golgin", "gene_name": "gorab", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0A0R4IVS5", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IVS5" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.28546340", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Dynamic Polarization of Rab11a Modulates Crb2a Localization and Impacts Signaling to Regulate Retinal Neurogenesis.", "journal": "Front. 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Biol.", "date": "2020", "authors": "Clark Brian S, Miesfeld Joel B, Flinn Michael A, Collery Ross F, Link Brian A", "reference": { "type": "PubMed", "id": "33634099", "url": "https://pubmed.ncbi.nlm.nih.gov/33634099" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A0R4IVS5-1", "protein_name": "Alpha-mannosidase", "gene_name": "man2a1", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0A0R4IVS5", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IVS5" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.33634099", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The Small Molecule R-(-)-beta-O-Methylsynephrine Binds to Nucleoporin 153 kDa and Inhibits Angiogenesis.", "journal": "Int. 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Dyn.", "date": "2011", "authors": "Mickoleit Michaela, Banisch Torsten U, Raz Erez", "reference": { "type": "PubMed", "id": "21337467", "url": "https://pubmed.ncbi.nlm.nih.gov/21337467" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A2R8QTX4-1", "protein_name": "ELAV-like protein", "gene_name": "elavl1b", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A2R8S0A2-1", "protein_name": "ELAV-like protein", "gene_name": "elavl2", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0A2R8QTX4", "url": "https://www.uniprot.org/uniprotkb/A0A2R8QTX4" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.21337467", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Genome wide analysis of 3' UTR sequence elements and proteins regulating mRNA stability during maternal-to-zygotic transition in zebrafish.", "journal": "Genome Res.", "date": "2019", "authors": "Vejnar Charles E, Abdel Messih Mario, Takacs Carter M, Yartseva Valeria, Oikonomou Panos, Christiano Romain, Stoeckius Marlon, Lau Stephanie, Lee Miler T, Beaudoin Jean-Denis, Musaev Damir, Darwich-Codore Hiba, Walther Tobias C, Tavazoie Saeed, Cifuentes Daniel, Giraldez Antonio J", "reference": { "type": "PubMed", "id": "31227602", "url": "https://pubmed.ncbi.nlm.nih.gov/31227602" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A2R8QTX4-1", "protein_name": "ELAV-like protein", "gene_name": "elavl1b", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4IZG6-1", "protein_name": "Uncharacterized protein 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Rep.", "date": "2019", "authors": "Rinne Maiju, Tanoli Zia-Ur-Rehman, Khan Asifullah, Xhaard Henri", "reference": { "type": "PubMed", "id": "31064998", "url": "https://pubmed.ncbi.nlm.nih.gov/31064998" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A0R4IWV6-1", "protein_name": "G protein-coupled receptor 184", "gene_name": "gpr184", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M1N8I4-1", "protein_name": "G-protein coupled receptor 55a", "gene_name": "gpr55a", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AC58GKB8-1", "protein_name": "Neuropeptide FF receptor 1", "gene_name": "npffr1l3", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0A0R4IWV6", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IWV6" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.31064998", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Gene duplication, gene loss and evolution of expression domains in the vertebrate nuclear receptor NR5A (Ftz-F1) family.", "journal": "Biochem. 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Mech.", "date": "2024", "authors": "Li Y., Liu D., Zhu M., Shen Q., Gong Z.", "reference": { "type": "PubMed", "id": "39397390", "url": "https://pubmed.ncbi.nlm.nih.gov/39397390" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A0R4IXA2-1", "protein_name": "Cellular communication network factor 1, like 2 precursor", "gene_name": "ccn1l2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9DFH2-1", "protein_name": "Transcription factor SOX-9a", "gene_name": "sox9a", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M9PGW6-1", "protein_name": "aromatase", "gene_name": "cyp19a1b", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q8JGS9-1", "protein_name": "Small ribosomal subunit protein uS13", "gene_name": "rps18", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0A0R4IXA2", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IXA2" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.39397390", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Involvement of hepatocellular carcinoma biomarker, cyclase-associated protein 2 in zebrafish body development and cancer progression.", "journal": "Exp. 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"Q2PRF5-1", "protein_name": "Olfactory receptor", "gene_name": "or62c6", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRF6-1", "protein_name": "Odorant receptor 128-9", "gene_name": "or64g2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRF7-1", "protein_name": "Odorant receptor 128-8", "gene_name": "or64e1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRF9-1", "protein_name": "Odorant receptor 128-6", "gene_name": "or64f1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRG1-1", "protein_name": "Odorant receptor 128-4", "gene_name": "or64b1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRG2-1", "protein_name": "Odorant receptor 128-3", "gene_name": "or64b4", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRG3-1", "protein_name": "Odorant receptor 128-2", "gene_name": "or64b3", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRG6-1", "protein_name": "Olfactory receptor", "gene_name": "or64a1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRG9-1", "protein_name": "Odorant receptor 137-4", "gene_name": "or90e2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRH1-1", "protein_name": "Odorant receptor 134-1", "gene_name": "or90a1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRH3-1", "protein_name": "Odorant receptor 137-2", "gene_name": "or90b1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRH4-1", "protein_name": "Odorant receptor 137-1", "gene_name": "or90d3", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRH7-1", "protein_name": "Odorant receptor 115-5", "gene_name": "or70a15", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRI0-1", "protein_name": "Odorant receptor 115-8", "gene_name": "or70a16", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRI1-1", "protein_name": "Odorant receptor 115-9", "gene_name": "or70a13", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRI3-1", "protein_name": "Odorant receptor 115-11", "gene_name": "or70a11", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRI7-1", "protein_name": "Odorant receptor, family H, subfamily 132, member 5", "gene_name": "or92a7", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRJ4-1", "protein_name": "Odorant receptor 109-6", "gene_name": "or109-6", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRJ9-1", "protein_name": "Odorant receptor 109-5", "gene_name": "or42a2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRK0-1", "protein_name": "Odorant receptor 109-4", "gene_name": "or42a6", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRK1-1", "protein_name": "Odorant receptor 109-3", "gene_name": "or42a5", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRK3-1", "protein_name": "Odorant receptor 109-1", "gene_name": "or42a1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRK4-1", "protein_name": "Odorant receptor 110-2", "gene_name": "or42b1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRK5-1", "protein_name": "Odorant receptor 110-1", "gene_name": "or42b2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRK6-1", "protein_name": "Odorant receptor 106-11", "gene_name": "or80a6", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRK7-1", "protein_name": "Odorant receptor 106-10", "gene_name": "or80a10", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRK8-1", "protein_name": "Odorant receptor 106-9", "gene_name": "or80a11", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRK9-1", "protein_name": "Odorant receptor 106-8", "gene_name": "or80a5", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRL0-1", "protein_name": "Odorant receptor 106-7", "gene_name": "or80a7", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRL1-1", "protein_name": "Odorant receptor 106-6", "gene_name": "or80a3", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRL3-1", "protein_name": "Odorant receptor 106-4", "gene_name": "or80a4", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRL4-1", "protein_name": "Odorant receptor 106-3", "gene_name": "or80a8", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRL5-1", "protein_name": "Odorant receptor 106-2", "gene_name": "or80a1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRL6-1", "protein_name": "Odorant receptor 106-1", "gene_name": "or80a13", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRL9-1", "protein_name": "Olfactory receptor", "gene_name": "or30bu1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRM1-1", "protein_name": "Olfactory receptor", "gene_name": "or61b1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRM3-1", "protein_name": "Olfactory receptor", "gene_name": "or41a1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRM4-1", "protein_name": "Olfactory receptor", "gene_name": "or41a3", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRM5-1", "protein_name": "Odorant receptor 106-12", "gene_name": "or80a2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AC58HBV7-1", "protein_name": "Odorant receptor 111-3 isoform X1", "gene_name": "or42d1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1QTF7-1", "protein_name": "Odorant receptor 132-1 isoform X1", "gene_name": "or92a1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M2BH28-1", "protein_name": "Odorant receptor, family 42, subfamily A, member 4 isoform X1", "gene_name": "or42a4", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRH9-1", "protein_name": "Odorant receptor 115-7", "gene_name": "or70a8", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0A1L1QZE3", "url": "https://www.uniprot.org/uniprotkb/A0A1L1QZE3" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.20333175", "abstract": "", 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Biol.", "date": "2020", "authors": "Olender Tsviya, Jones Tamsin E M, Bruford Elspeth, Lancet Doron", "reference": { "type": "PubMed", "id": "32295537", "url": "https://pubmed.ncbi.nlm.nih.gov/32295537" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A1L1QZE3-1", "protein_name": "Olfactory receptor", "gene_name": "or60a1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0ACD6B7K1-1", "protein_name": "Olfactory receptor", "gene_name": "or63a2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M6Z100-1", "protein_name": "Odorant receptor 137-3 isoform X1", "gene_name": "or90b2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q90426-1", "protein_name": "Odorant receptor 115-10", "gene_name": "or70a4", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q90428-1", "protein_name": "Odorant receptor 115-15", "gene_name": "or70b1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9I8Z0-1", "protein_name": "Odorant receptor 111-8", "gene_name": "or42e2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9I8Z5-1", "protein_name": "Olfactory receptor", "gene_name": "or30bx1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9I8Z1-1", "protein_name": "Odorant receptor 111-9", "gene_name": "or42d2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9I8Z6-1", "protein_name": "Olfactory receptor", "gene_name": "or30bw1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "F6NN09-1", "protein_name": "Uncharacterized protein LOC335412", "gene_name": "si:dkey-92k1.9", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRE4-1", "protein_name": "Odorant receptor 113-2", "gene_name": "or55a2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRE5-1", "protein_name": "Odorant receptor 113-1", "gene_name": "or55a1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M1PAL2-1", "protein_name": "Olfactory receptor", "gene_name": "or63b2", "tax_name": "Zebrafish" }, { 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"Zebrafish" }, { "uniprot_canonical_ac": "Q2PRK2-1", "protein_name": "Odorant receptor 109-2", "gene_name": "or42a8", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRE9-1", "protein_name": "Olfactory receptor", "gene_name": "or63b1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PR85-1", "protein_name": "Odorant receptor 132-4", "gene_name": "or92a2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PR87-1", "protein_name": "Odorant receptor 132-2", "gene_name": "or92a4", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PR99-1", "protein_name": "Olfactory receptor", "gene_name": "or62a2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRA0-1", "protein_name": "Olfactory receptor", "gene_name": "or62b2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRA2-1", "protein_name": "Olfactory receptor", "gene_name": "or62b4", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRA3-1", "protein_name": "Odorant receptor 125-4", "gene_name": "or62b3", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRA4-1", "protein_name": "Odorant receptor 125-3", "gene_name": "or62b5", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRA5-1", "protein_name": "Olfactory receptor", "gene_name": "or62a1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRA6-1", "protein_name": "Olfactory receptor", "gene_name": "or62a3", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRA7-1", "protein_name": "Odorant receptor 123-1", "gene_name": "or61a1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRA8-1", "protein_name": "Olfactory receptor", "gene_name": "or61c2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRA9-1", "protein_name": "Odorant receptor 124-2", "gene_name": "or61c1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRB2-1", "protein_name": "Odorant receptor 131-1", "gene_name": "or91a1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRB3-1", "protein_name": "Odorant receptor 102-5", "gene_name": "or30by1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRB9-1", "protein_name": "Odorant receptor 103-3", "gene_name": "or30bt5", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRD7-1", "protein_name": "Olfactory receptor", "gene_name": "or71as1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRD8-1", "protein_name": "Odorant receptor 118-3", "gene_name": "or71ar1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRD9-1", "protein_name": "Olfactory receptor", "gene_name": "or71as2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRE0-1", "protein_name": "Olfactory receptor", "gene_name": "or71at1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRE1-1", "protein_name": "Odorant receptor 116-2", "gene_name": "or71aq2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRE2-1", "protein_name": "Odorant receptor 116-1", "gene_name": "or71aq1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRE3-1", "protein_name": "Odorant receptor 114-1", "gene_name": "or55d1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRE6-1", "protein_name": "Odorant receptor 129-1", "gene_name": "or95a1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRE7-1", "protein_name": "Odorant receptor 135-1", "gene_name": "or90j1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRF0-1", "protein_name": "Odorant receptor 128-10", "gene_name": "or64d1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRF2-1", "protein_name": "Odorant receptor 126-5", "gene_name": "or62c1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRF3-1", "protein_name": "Odorant receptor 126-4", "gene_name": "or62c4", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRF4-1", "protein_name": "Odorant receptor 126-3", "gene_name": "or62c2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRF6-1", "protein_name": "Odorant receptor 128-9", "gene_name": "or64g2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRF7-1", "protein_name": "Odorant receptor 128-8", "gene_name": "or64e1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRF9-1", "protein_name": "Odorant receptor 128-6", "gene_name": "or64f1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRG1-1", "protein_name": "Odorant receptor 128-4", "gene_name": "or64b1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRG2-1", "protein_name": "Odorant receptor 128-3", "gene_name": "or64b4", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRG3-1", "protein_name": "Odorant receptor 128-2", "gene_name": "or64b3", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRG6-1", "protein_name": "Olfactory receptor", "gene_name": "or64a1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRG9-1", "protein_name": "Odorant receptor 137-4", "gene_name": "or90e2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRH1-1", "protein_name": "Odorant receptor 134-1", "gene_name": "or90a1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRH3-1", "protein_name": "Odorant receptor 137-2", "gene_name": "or90b1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRH4-1", "protein_name": "Odorant receptor 137-1", "gene_name": "or90d3", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRH7-1", "protein_name": "Odorant receptor 115-5", "gene_name": "or70a15", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRI0-1", "protein_name": "Odorant receptor 115-8", "gene_name": "or70a16", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRI3-1", "protein_name": "Odorant receptor 115-11", "gene_name": "or70a11", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRI7-1", "protein_name": "Odorant receptor, family H, subfamily 132, member 5", "gene_name": "or92a7", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRJ4-1", "protein_name": "Odorant receptor 109-6", "gene_name": "or109-6", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRJ9-1", "protein_name": "Odorant receptor 109-5", "gene_name": "or42a2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRK0-1", "protein_name": "Odorant receptor 109-4", "gene_name": "or42a6", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRK1-1", "protein_name": "Odorant receptor 109-3", "gene_name": "or42a5", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRK3-1", "protein_name": "Odorant receptor 109-1", "gene_name": "or42a1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRK4-1", "protein_name": "Odorant receptor 110-2", "gene_name": "or42b1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRK5-1", "protein_name": "Odorant receptor 110-1", "gene_name": "or42b2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRK6-1", "protein_name": "Odorant receptor 106-11", "gene_name": "or80a6", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRK7-1", "protein_name": "Odorant receptor 106-10", "gene_name": "or80a10", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRK8-1", "protein_name": "Odorant receptor 106-9", "gene_name": "or80a11", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRK9-1", "protein_name": "Odorant receptor 106-8", "gene_name": "or80a5", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRL1-1", "protein_name": "Odorant receptor 106-6", "gene_name": "or80a3", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRL2-1", "protein_name": "Odorant receptor 106-5", "gene_name": "or80a9", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRL3-1", "protein_name": "Odorant receptor 106-4", "gene_name": "or80a4", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRL4-1", "protein_name": "Odorant receptor 106-3", "gene_name": "or80a8", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRL5-1", "protein_name": "Odorant receptor 106-2", "gene_name": "or80a1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRL6-1", "protein_name": "Odorant receptor 106-1", "gene_name": "or80a13", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRL9-1", "protein_name": "Olfactory receptor", "gene_name": "or30bu1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRM1-1", "protein_name": "Olfactory receptor", "gene_name": "or61b1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRM3-1", "protein_name": "Olfactory receptor", "gene_name": "or41a1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRM4-1", "protein_name": "Olfactory receptor", "gene_name": "or41a3", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRM5-1", "protein_name": "Odorant receptor 106-12", "gene_name": "or80a2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AC58HBV7-1", "protein_name": "Odorant receptor 111-3 isoform X1", "gene_name": "or42d1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9PRJ2-1", "protein_name": "Olfactory receptor", "gene_name": "or30bt1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1QTF7-1", "protein_name": "Odorant receptor 132-1 isoform X1", "gene_name": "or92a1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M2BH28-1", "protein_name": "Odorant receptor, family 42, subfamily A, member 4 isoform X1", "gene_name": "or42a4", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRH9-1", "protein_name": "Odorant receptor 115-7", "gene_name": "or70a8", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0A1L1QZE3", "url": "https://www.uniprot.org/uniprotkb/A0A1L1QZE3" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.32295537", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 92 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Expression of olfactory receptor genes in non-olfactory tissues in the developing and adult zebrafish.", "journal": "Sci. Rep.", "date": "2023", "authors": "Jundi Dania, Coutanceau Jean-Pierre, Bullier Erika, Imarraine Soumaiya, Fajloun Ziad, Hong Elim", "reference": { "type": "PubMed", "id": "36944644", "url": "https://pubmed.ncbi.nlm.nih.gov/36944644" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A1L1QZE3-1", "protein_name": "Olfactory receptor", "gene_name": "or60a1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M6Z100-1", "protein_name": "Odorant receptor 137-3 isoform X1", "gene_name": "or90b2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AB13A8L4-1", "protein_name": "Odorant receptor, family 93, subfamily A, member 6", "gene_name": "or93a6", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AB13A9A1-1", "protein_name": "Olfactory receptor, family 93, subfamily A, member 7", "gene_name": "or93a7", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PR85-1", "protein_name": "Odorant receptor 132-4", "gene_name": "or92a2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRA3-1", "protein_name": "Odorant receptor 125-4", "gene_name": "or62b3", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRB9-1", "protein_name": "Odorant receptor 103-3", "gene_name": "or30bt5", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRC1-1", "protein_name": "Olfactory receptor", "gene_name": "or30bt3", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRE0-1", "protein_name": "Olfactory receptor", "gene_name": "or71at1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRE7-1", "protein_name": "Odorant receptor 135-1", "gene_name": "or90j1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRF3-1", "protein_name": "Odorant receptor 126-4", "gene_name": "or62c4", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRF4-1", "protein_name": "Odorant receptor 126-3", "gene_name": "or62c2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRG1-1", "protein_name": "Odorant 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Teratol.", "date": "2018", "authors": "Lee Jinyoung, Horzmann Katharine A, Freeman Jennifer L", "reference": { "type": "PubMed", "id": "29074346", "url": "https://pubmed.ncbi.nlm.nih.gov/29074346" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A286Y8C7-1", "protein_name": "Synaptic vesicle glycoprotein 2Ca isoform X1", "gene_name": "sv2ca", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0A286Y8C7", "url": "https://www.uniprot.org/uniprotkb/A0A286Y8C7" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.29074346", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Evolution of vertebrate nicotinic acetylcholine receptors.", "journal": "BMC Evol. 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Commun.", "date": "2018", "authors": "Juan Thomas, G\u00e9minard Charles, Coutelis Jean-Baptiste, Cerezo Delphine, Pol\u00e8s Sophie, Noselli St\u00e9phane, F\u00fcrthauer Maximilian", "reference": { "type": "PubMed", "id": "29769531", "url": "https://pubmed.ncbi.nlm.nih.gov/29769531" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A286YBP3-1", "protein_name": "Unconventional myosin-Ig isoform X1", "gene_name": "myo1g", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7F9L8-1", "protein_name": "Unconventional myosin-Id", "gene_name": "myo1d", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AC58HBA4-1", "protein_name": "Unconventional myosin-Ic", "gene_name": "myo1cb", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0A286YBP3", "url": "https://www.uniprot.org/uniprotkb/A0A286YBP3" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.29769531", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Myosin1G promotes Nodal signaling to control zebrafish left-right asymmetry.", "journal": "Nat. Commun.", "date": "2024", "authors": "Kurup Akshai Janardhana, Bailet Florian, F\u00fcrthauer Maximilian", "reference": { "type": "PubMed", "id": "39095343", "url": "https://pubmed.ncbi.nlm.nih.gov/39095343" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A286YBP3-1", "protein_name": "Unconventional myosin-Ig isoform X1", "gene_name": "myo1g", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q7ZV84-1", "protein_name": "Dynein axonemal assembly factor 1", "gene_name": "dnaaf1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7F9L8-1", "protein_name": "Unconventional myosin-Id", "gene_name": "myo1d", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8N1Z238-1", "protein_name": "DAN domain family member 5 precursor", "gene_name": "dand5", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AC58HBA4-1", "protein_name": "Unconventional myosin-Ic", "gene_name": "myo1cb", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AB13A7H0-1", "protein_name": "Dynein axonemal heavy chain 17", "gene_name": "dnah9", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0A286YBP3", "url": "https://www.uniprot.org/uniprotkb/A0A286YBP3" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.39095343", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Gender-specific proteomic responses in zebrafish liver following exposure to a selected mixture of brominated flame retardants.", "journal": "Ecotoxicol. Environ. Saf.", "date": "2008", "authors": "Kling P, Norman A, Andersson P L, Norrgren L, F\u00f6rlin L", "reference": { "type": "PubMed", "id": "18258299", "url": "https://pubmed.ncbi.nlm.nih.gov/18258299" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A2R8PW65-1", "protein_name": "NAD(P)H dehydrogenase [quinone] 1", "gene_name": "nqo1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M1NXI0-1", "protein_name": "Protein disulfide-isomerase", "gene_name": "pdia3", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0A2R8PW65", "url": "https://www.uniprot.org/uniprotkb/A0A2R8PW65" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.18258299", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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Giorgetti S, Villani S, Gistelinck C, Wagener R, Kobbe B, Fiedler I A K, Larionova D, Busse B, Eyre D, Rossi A, Witten P E, Forlino A", "reference": { "type": "PubMed", "id": "32173581", "url": "https://pubmed.ncbi.nlm.nih.gov/32173581" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A2R8Q307-1", "protein_name": "Forkhead box protein J3", "gene_name": "foxj3", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q6NYW6-1", "protein_name": "CLIP-associating protein 2", "gene_name": "clasp2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q1LUM9-1", "protein_name": "Dynein light intermediate chain", "gene_name": "dync1li1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M2B6D5-1", "protein_name": "Programmed cell death 6-interacting protein", "gene_name": "pdcd6ip", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0A2R8Q307", "url": 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Photobiol. Sci.", "date": "2010", "authors": "Shiraki Tomoya, Kojima Daisuke, Fukada Yoshitaka", "reference": { "type": "PubMed", "id": "20886157", "url": "https://pubmed.ncbi.nlm.nih.gov/20886157" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A2R8Q4C0-1", "protein_name": "Teleost multiple tissue opsin b", "gene_name": "tmtopsb", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q8JFR3-1", "protein_name": "Parapinopsin b", "gene_name": "parapinopsinb", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0A2R8Q4C0", "url": "https://www.uniprot.org/uniprotkb/A0A2R8Q4C0" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.20886157", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Deep brain photoreceptors control light-seeking behavior in zebrafish larvae.", "journal": "Curr. Biol.", "date": "2012", "authors": "Fernandes Ant\u00f3nio M, Fero Kandice, Arrenberg Aristides B, Bergeron Sadie A, Driever Wolfgang, Burgess Harold A", "reference": { "type": "PubMed", "id": "23000151", "url": "https://pubmed.ncbi.nlm.nih.gov/23000151" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A2R8Q4C0-1", "protein_name": "Teleost multiple tissue opsin b", "gene_name": "tmtopsb", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0A2R8Q4C0", "url": "https://www.uniprot.org/uniprotkb/A0A2R8Q4C0" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.23000151", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Zebrafish Circadian Clock Entrainment and the Importance of Broad Spectral Light Sensitivity.", "journal": "Front. Physiol.", "date": "2020", "authors": "Steindal Inga A Fr\u00f8land, Whitmore David", "reference": { "type": "PubMed", "id": "32922310", "url": "https://pubmed.ncbi.nlm.nih.gov/32922310" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A2R8Q4C0-1", "protein_name": "Teleost multiple tissue opsin b", "gene_name": "tmtopsb", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M1N2G0-1", "protein_name": "Visual pigment-like receptor peropsin", "gene_name": "rrh", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q8JFR3-1", "protein_name": "Parapinopsin b", "gene_name": "parapinopsinb", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0A2R8Q4C0", "url": "https://www.uniprot.org/uniprotkb/A0A2R8Q4C0" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.32922310", "abstract": "", 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"o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Comparative analysis of nonaspanin protein sequences and expression studies in zebrafish.", "journal": "Immunogenetics", "date": "2010", "authors": "Pruvot Benoist, Laurens V\u00e9ronique, Salvadori Fran\u00e7oise, Solary Eric, Pichon Laurent, Chluba Johanna", "reference": { "type": "PubMed", "id": "20820770", "url": "https://pubmed.ncbi.nlm.nih.gov/20820770" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A2R8Q6R8-1", "protein_name": "Transmembrane 9 superfamily member", "gene_name": "tm9sf5", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1Q4U1-1", "protein_name": "Transmembrane 9 superfamily member", "gene_name": "tm9sf4", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0A2R8Q6R8", "url": 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Immunol.", "date": "2021", "authors": "Lu Henry Y, Sertori Robert, Contreras Alejandra V, Hamer Mark, Messing Melina, Del Bel Kate L, Lopez-Rangel Elena, Chan Edmond S, Rehmus Wingfield, Milner Joshua D, McNagny Kelly M, Lehman Anna, Wiest David L, Turvey Stuart E", "reference": { "type": "PubMed", "id": "34887873", "url": "https://pubmed.ncbi.nlm.nih.gov/34887873" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A2R8Q8A6-1", "protein_name": "BAF chromatin remodeling complex subunit BCL11B a isoform 1", "gene_name": "bcl11ba", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0A2R8Q8A6", "url": "https://www.uniprot.org/uniprotkb/A0A2R8Q8A6" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.34887873", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], 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Hagen B, Irmler Martin, Beckers Johannes, Wurst Wolfgang, Zwergal Andreas, Schauer Tamas, Straub Tobias, Czopka Tim, Tr\u00fcmbach Dietrich, G\u00f6tz Magdalena, Stricker Stefan H, Ninkovic Jovica", "reference": { "type": "PubMed", "id": "35159329", "url": "https://pubmed.ncbi.nlm.nih.gov/35159329" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A2R8Q9M5-1", "protein_name": "Toll-like receptor 8b precursor", "gene_name": "tlr8b", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0A2R8Q9M5", "url": "https://www.uniprot.org/uniprotkb/A0A2R8Q9M5" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.35159329", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": 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Med.", "date": "2016", "authors": "Moore Finola E, Garcia Elaine G, Lobbardi Riadh, Jain Esha, Tang Qin, Moore John C, Cortes Mauricio, Molodtsov Aleksey, Kasheta Melissa, Luo Christina C, Garcia Amaris J, Mylvaganam Ravi, Yoder Jeffrey A, Blackburn Jessica S, Sadreyev Ruslan I, Ceol Craig J, North Trista E, Langenau David M", "reference": { "type": "PubMed", "id": "27139488", "url": "https://pubmed.ncbi.nlm.nih.gov/27139488" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A2R8Q9T1-1", "protein_name": "Thymocyte selection-associated high mobility group box protein TOX", "gene_name": "tox", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M1NHR0-1", "protein_name": "Cleavage and polyadenylation specificity factor subunit 1", "gene_name": "cpsf1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M1P8N4-1", "protein_name": "B-cell antigen receptor complex-associated protein alpha chain precursor", "gene_name": "cd79a", "tax_name": 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Effects of Lithium and 2,4-Dichlorophenol on Zebrafish: Circadian Rhythm Disorder and Molecular Effects.", "journal": "Zebrafish", "date": "2017", "authors": "Xiao Bo, Cui Li-Qiang, Ding Cheng, Wang Han", "reference": { "type": "PubMed", "id": "28318412", "url": "https://pubmed.ncbi.nlm.nih.gov/28318412" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A2R8QAB1-1", "protein_name": "Cyclin-T2a isoform 1", "gene_name": "ccnt2a", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M1P526-1", "protein_name": "ATP synthase subunit gamma", "gene_name": "atp5f1c", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "B8A4W8-1", "protein_name": "pantothenate kinase", "gene_name": "pank2", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", 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regulation and potential involvement in hyperactivity disorders.", "journal": "Toxicol. Appl. 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Dyn.", "date": "2009", "authors": "Jezewski P A, Fang P-K, Payne-Ferreira T L, Yelick P C", "reference": { "type": "PubMed", "id": "19418442", "url": "https://pubmed.ncbi.nlm.nih.gov/19418442" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A2R8QEJ0-1", "protein_name": "T-box transcription factor TBX15", "gene_name": "tbx15", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0A2R8QEJ0", "url": "https://www.uniprot.org/uniprotkb/A0A2R8QEJ0" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.19418442", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Evolution of the tbx6/16 subfamily genes in vertebrates: insights from zebrafish.", "journal": "Mol. Biol. Evol.", "date": "2012", "authors": "Ahn Daegwon, You Kwan-Hee, Kim Cheol-Hee", "reference": { "type": "PubMed", "id": "22915831", "url": "https://pubmed.ncbi.nlm.nih.gov/22915831" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A2R8QEJ0-1", "protein_name": "T-box transcription factor TBX15", "gene_name": "tbx15", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7FFQ7-1", "protein_name": "3.4.17.22; Carboxypeptidase D, b", "gene_name": "cpdb", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7F2R4-1", "protein_name": "Ankyrin repeat domain-containing protein 13B", "gene_name": "ankrd13b", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "D1YT98-1", "protein_name": "T-box transcription factor TBX21", "gene_name": "tbx21", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M1P8J4-1", "protein_name": "Peroxisomal sarcosine oxidase", "gene_name": "pipox", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0A2R8QEJ0", "url": "https://www.uniprot.org/uniprotkb/A0A2R8QEJ0" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.22915831", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Fss/Tbx6 is required for central dermomyotome cell fate in zebrafish.", "journal": "Biol. Open", "date": "2012", "authors": "Windner Stefanie Elisabeth, Bird Nathan Craig, Patterson Sara Elizabeth, Doris Rosemarie Anne, Devoto Stephen Henri", "reference": { "type": "PubMed", "id": "23213474", "url": "https://pubmed.ncbi.nlm.nih.gov/23213474" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A2R8QEJ0-1", "protein_name": "T-box transcription factor TBX15", "gene_name": "tbx15", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0A2R8QEJ0", "url": "https://www.uniprot.org/uniprotkb/A0A2R8QEJ0" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.23213474", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Genome Sequencing of the Japanese Eel (Anguilla japonica) for Comparative Genomic Studies on tbx4 and a tbx4 Gene Cluster in Teleost Fishes.", "journal": "Mar. Drugs", "date": "2019", "authors": "Chen Weiwei, Bian Chao, You Xinxin, Li Jia, Ye Lizhen, Wen Zhengyong, Lv Yunyun, Zhang Xinhui, Xu Junmin, Yang Shaosen, Gu Ruobo, Lin Xueqiang, Shi Qiong", "reference": { "type": "PubMed", "id": "31330852", "url": "https://pubmed.ncbi.nlm.nih.gov/31330852" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A2R8QEJ0-1", "protein_name": "T-box transcription factor TBX15", "gene_name": "tbx15", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AB32T509-1", "protein_name": "T-box transcription factor TBX4 isoform X1", "gene_name": "tbx4", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AC58HBS2-1", "protein_name": "DNA 5'-3' helicase", "gene_name": "brip1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "P79742-1", "protein_name": "T-box transcription factor TBX6L", "gene_name": "tbx16l; tbx6l", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0A2R8QEJ0", "url": "https://www.uniprot.org/uniprotkb/A0A2R8QEJ0" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.31330852", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Biallelic variants in UBA5 reveal that disruption of the UFM1 cascade can result in early-onset encephalopathy.", "journal": "Am. J. Hum. Genet.", "date": "2016", "authors": "Colin E, Daniel J, Ziegler A, Wakim J, Scrivo A, Haack TB, Khiati S, Denomme AS, Amati-Bonneau P, Charif M, Procaccio V, Reynier P, Aleck KA, Botto LD, Herper CL, Kaiser CS, Nabbout R, N'Guyen S, Mora-Lorca JA, Assmann B, Christ S, Meitinger T, Strom TM, Prokisch H, Miranda-Vizuete A, Hoffmann GF, Lenaers G, Bomont P, Liebau E, Bonneau D", "reference": { "type": "PubMed", "id": "27545681", "url": "https://pubmed.ncbi.nlm.nih.gov/27545681" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A2R8QGC0-1", "protein_name": "Ubiquitin-like modifier-activating enzyme 5", "gene_name": "uba5", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9GZZ9-1", "protein_name": "Ubiquitin-like modifier-activating enzyme 5", "gene_name": "UBA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "X1WER2-1", "protein_name": "Ubiquitin-like modifier-activating enzyme 5", "gene_name": "uba5", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0A2R8QGC0", "url": "https://www.uniprot.org/uniprotkb/A0A2R8QGC0" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.27545681", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "Genetic model of UBA5 deficiency highlights the involvement of both peripheral and central nervous systems and identifies widespread mitochondrial abnormalities.", "journal": "Brain Commun.", "date": "2023", "authors": "Oorschot V., Sonntag C., Ramm G., Bryson-Richardson R.J., Serrano R.J., Calcinotto V., Palipana D.", "reference": { "type": "PubMed", "id": "38046095", "url": "https://pubmed.ncbi.nlm.nih.gov/38046095" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A2R8QGC0-1", "protein_name": "Ubiquitin-like modifier-activating enzyme 5", "gene_name": "uba5", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0A2R8QGC0", "url": "https://www.uniprot.org/uniprotkb/A0A2R8QGC0" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.38046095", 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