[ { "title": "Expression of the Scavenger Receptor Class B type I (SR-BI) family in Drosophila melanogaster.", "journal": "Int. J. Dev. Biol.", "date": "2011", "authors": "Herboso Leire, Talamillo Ana, P\u00e9rez Coralia, Barrio Rosa", "reference": { "type": "PubMed", "id": "21948708", "url": "https://pubmed.ncbi.nlm.nih.gov/21948708" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "B7Z031-1", "protein_name": "Protein peste", "gene_name": "pes", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q27367-1", "protein_name": "Protein croquemort", "gene_name": "crq", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VDD3-1", "protein_name": "Sensory neuron membrane protein 1", "gene_name": "Snmp1", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "B7Z031", "url": "https://www.uniprot.org/uniprotkb/B7Z031" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.21948708", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification and characterization of Drosophila Snurportin reveals a role for the import receptor Moleskin/Importin7 in snRNP biogenesis.", "journal": "Mol. Biol. Cell", "date": "2013", "authors": "Natalizio Amanda Hicks, Matera A Gregory", "reference": { "type": "PubMed", "id": "23885126", "url": "https://pubmed.ncbi.nlm.nih.gov/23885126" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "B7Z0I7-1", "protein_name": "Snurportin-1", "gene_name": "Snup", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "A1Z7A8-1", "protein_name": "Coilin", "gene_name": "coil", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O18388-1", "protein_name": "Importin subunit beta", "gene_name": "Fs(2)Ket", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VV74-1", "protein_name": "Survival motor neuron protein", "gene_name": "Smn", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q05856-1", "protein_name": "Small nuclear ribonucleoprotein-associated protein B", "gene_name": "SmB", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "B7Z0I7", "url": "https://www.uniprot.org/uniprotkb/B7Z0I7" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.23885126", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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and characterization of a Ptx1 homolog in Drosophila.", "journal": "Mechanisms of development", "date": "1997-11", "authors": "Vorbr\u00fcggen G, Constien R, Zilian O, Wimmer E A, Dowe G, Taubert H, Noll M, J\u00e4ckle H", "reference": { "type": "PubMed", "id": "9431811", "url": "https://pubmed.ncbi.nlm.nih.gov/9431811" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O18400-1", "protein_name": "Pituitary homeobox homolog Ptx1", "gene_name": "Ptx1", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O18400", "url": "https://www.uniprot.org/uniprotkb/O18400" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.9431811", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Gene regulation by O2 deprivation: an anoxia-regulated novel gene in Drosophila melanogaster.", "journal": "Brain research. Molecular brain research", "date": "1999-01-08", "authors": "Ma E, Xu T, Haddad G G", "reference": { "type": "PubMed", "id": "9878744", "url": "https://pubmed.ncbi.nlm.nih.gov/9878744" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "C0HK95-1", "protein_name": "Protein anoxia up-regulated", "gene_name": "fau", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "C0HK95", "url": "https://www.uniprot.org/uniprotkb/C0HK95" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.9878744", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The evolution of parasite recognition genes in the innate immune system: purifying selection on Drosophila melanogaster peptidoglycan recognition proteins.", "journal": "J. Mol. Evol.", "date": "2003", "authors": "Jiggins FM, Hurst GD", "reference": { "type": "PubMed", "id": "14738318", "url": "https://pubmed.ncbi.nlm.nih.gov/14738318" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "C0HK98-1", "protein_name": "Peptidoglycan-recognition protein SC1a", "gene_name": "PGRP-SC1a", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "C0HK99-1", "protein_name": "Peptidoglycan-recognition protein SC1b", "gene_name": "PGRP-SC1b", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VV96-1", "protein_name": "Peptidoglycan-recognition protein SB2", "gene_name": "PGRP-SB2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VS97-1", "protein_name": "Peptidoglycan-recognition protein SD", "gene_name": "PGRP-SD", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q70PY2-1", "protein_name": "Peptidoglycan-recognition protein SB1", "gene_name": "PGRP-SB1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V4X2-1", "protein_name": "Peptidoglycan-recognition protein SC2", "gene_name": "PGRP-SC2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VYX7-1", "protein_name": "Peptidoglycan-recognition protein SA", "gene_name": "PGRP-SA", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "C0HK98", "url": "https://www.uniprot.org/uniprotkb/C0HK98" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.14738318", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 7 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Intragenic Hill-Robertson interference influences selection intensity on synonymous mutations in Drosophila.", "journal": "Mol. Biol. 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The imd gene is required for local Cecropin expression in Drosophila barrier epithelia.", "journal": "EMBO reports", "date": "2001-03", "authors": "Onfelt Tingvall T, Roos E, Engstr\u00f6m Y", "reference": { "type": "PubMed", "id": "11266367", "url": "https://pubmed.ncbi.nlm.nih.gov/11266367" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "C0HKQ7-1", "protein_name": "Cecropin-A1", "gene_name": "CecA1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7K4Z4-1", "protein_name": "Protein immune deficiency", "gene_name": "imd", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "C0HKQ7", "url": "https://www.uniprot.org/uniprotkb/C0HKQ7" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.11266367", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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"total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of new immune induced molecules in the haemolymph of Drosophila melanogaster by 2D-nanoLC MS/MS.", "journal": "J. Insect Physiol.", "date": "2006", "authors": "Verleyen Peter, Baggerman Geert, D'Hertog Wannes, Vierstraete Evy, Husson Steven J, Schoofs Liliane", "reference": { "type": "PubMed", "id": "16510152", "url": "https://pubmed.ncbi.nlm.nih.gov/16510152" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "C0HKQ7-1", "protein_name": "Cecropin-A1", "gene_name": "CecA1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q95NH6-1", "protein_name": "Attacin-C", "gene_name": "AttC", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V751-1", "protein_name": "Attacin-B", "gene_name": "AttB", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P82705-1", "protein_name": "Daisho1", "gene_name": "Dso1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P36192-1", "protein_name": "Defensin", "gene_name": "Def", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P45884-1", "protein_name": "Attacin-A", "gene_name": "AttA", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "C0HM00-1", "protein_name": "Baramicin A2", "gene_name": "BaraA2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "C0HLZ9-1", "protein_name": "Baramicin A1", "gene_name": "BaraA1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VU58-1", "protein_name": "Neuropeptide-like 2", "gene_name": "Nplp2", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "C0HKQ7", "url": "https://www.uniprot.org/uniprotkb/C0HKQ7" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.16510152", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 9 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { 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"field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The cecropin locus in Drosophila; a compact gene cluster involved in the response to infection.", "journal": "EMBO J.", "date": "1990", "authors": "Kylsten P, Samakovlis C, Hultmark D", "reference": { "type": "PubMed", "id": "2104802", "url": "https://pubmed.ncbi.nlm.nih.gov/2104802" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "C0HKQ7-1", "protein_name": "Cecropin-A1", "gene_name": "CecA1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "C0HKQ8-1", "protein_name": "Cecropin-A2", "gene_name": "CecA2", 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}, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular population genetics of Drosophila immune system genes.", "journal": "Genetics", "date": "1997", "authors": "Clark AG, Wang L", "reference": { "type": "PubMed", "id": "9335607", "url": "https://pubmed.ncbi.nlm.nih.gov/9335607" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "C0HKQ7-1", "protein_name": "Cecropin-A1", "gene_name": "CecA1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P24492-1", "protein_name": "Diptericin A", "gene_name": "DptA", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "C0HKQ8-1", "protein_name": "Cecropin-A2", "gene_name": "CecA2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O16829-1", "protein_name": "Cecropin-C", "gene_name": "CecC", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P21663-1", "protein_name": "Andropin", "gene_name": "Anp", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P14956-1", "protein_name": "Cecropin-B", "gene_name": "CecB", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "C0HKQ7", "url": "https://www.uniprot.org/uniprotkb/C0HKQ7" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.9335607", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { 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Neurosci.", "date": "1997", "authors": "Kolhekar A S, Roberts M S, Jiang N, Johnson R C, Mains R E, Eipper B A, Taghert P H", "reference": { "type": "PubMed", "id": "9006979", "url": "https://pubmed.ncbi.nlm.nih.gov/9006979" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O01404-1", "protein_name": "Peptidylglycine alpha-hydroxylating monooxygenase", "gene_name": "Phm", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O01404", "url": "https://www.uniprot.org/uniprotkb/O01404" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.9006979", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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Biol. 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"uniprot_canonical_ac": "Q9Y4E8-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 15", "gene_name": "USP15", "tax_name": "Human" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "M9PD06", "url": "https://www.uniprot.org/uniprotkb/M9PD06" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "mutagenesis": [ { "start_pos": 298, "end_pos": 298, "sequence_org": "C", "sequence_mut": "A", "comment": "Loss of enzyme activity.", "evidence": [ { "database": "UniProtKB", "id": "Q9Y4E8", "url": "https://www.uniprot.org/uniprotkb/Q9Y4E8" }, { "database": "PubMed", "id": "22344298", "url": "https://pubmed.ncbi.nlm.nih.gov/22344298" }, { "database": "PubMed", "id": "24852371", "url": "https://pubmed.ncbi.nlm.nih.gov/24852371" }, { "database": "PubMed", "id": "21947082", "url": "https://pubmed.ncbi.nlm.nih.gov/21947082" }, { "database": "PubMed", "id": 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Comparison of the molecular and genetic map of the 2B6-2B7-8 of Drosophila melanogaster X-chromosome.", "journal": "Genetika", "date": "1999", "authors": "Makunin I V, Shestopal S A, Beliaeva E S, Ashburner M, Khimulev I F", "reference": { "type": "PubMed", "id": "10546111", "url": "https://pubmed.ncbi.nlm.nih.gov/10546111" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O46341-1", "protein_name": "Protein a6", "gene_name": "a6", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O46341", "url": "https://www.uniprot.org/uniprotkb/O46341" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.10546111", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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I, Bolshakov S, Papagiannakis G, Spanos L, Cox S, Madue\u00f1o E, de Pablos B, Modolell J, Peter A, Sch\u00f6ttler P, Werner M, Mourkioti F, Beinert N, Dowe G, Sch\u00e4fer U, J\u00e4ckle H, Bucheton A, Callister D M, Campbell L A, Darlamitsou A, Henderson N S, McMillan P J, Salles C, Tait E A, Valenti P, Saunder R D, Glover D M", "reference": { "type": "PubMed", "id": "10731137", "url": "https://pubmed.ncbi.nlm.nih.gov/10731137" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O46341-1", "protein_name": "Protein a6", "gene_name": "a6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O46051-1", "protein_name": "Probable cytochrome P450 4d14", "gene_name": "Cyp4d14", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O46043-1", "protein_name": "Poly(ADP-ribose) glycohydrolase", "gene_name": "Parg", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O46072-1", "protein_name": "Probable ATP-dependent RNA helicase kurz", "gene_name": "kz", 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}, { "uniprot_canonical_ac": "P49630-1", "protein_name": "Large ribosomal subunit protein eL36", "gene_name": "RpL36", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P91679-1", "protein_name": "Peptide transporter family 1", "gene_name": "yin", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q24472-1", "protein_name": "Retinoblastoma family protein", "gene_name": "Rbf", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7K0Y1-1", "protein_name": "Ribosome biogenesis protein BOP1 homolog", "gene_name": "CG5033", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W5A5-1", "protein_name": "Protein movement modulator", "gene_name": "Motor", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W5E0-1", "protein_name": "Histone-lysine N-methyltransferase Suv4-20", "gene_name": "Hmt4-20", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W596-1", "protein_name": "Microtubule-associated protein futsch", "gene_name": "futsch", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XZS8-1", "protein_name": "Activating transcription factor 3", "gene_name": "Atf3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9I7X6-2", "protein_name": "Carnosine N-methyltransferase unmet", "gene_name": "unmet", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3X4-1", "protein_name": "Seipin", "gene_name": "Seipin", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O77438-1", "protein_name": "Frizzled-3", "gene_name": "fz3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O46054-1", "protein_name": "Cytochrome P450 4ae1", "gene_name": "Cyp4ae1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O46089-1", "protein_name": "Protein MMS22-like", "gene_name": "Dmel\\CG14803", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O46098-1", "protein_name": "LYR motif-containing protein 4 homolog", "gene_name": "bcn92", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O76879-1", "protein_name": "Circadian clock-controlled protein daywake", "gene_name": "dyw", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O76906-1", "protein_name": "Protein cramped", "gene_name": "crm", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O97422-1", "protein_name": "Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase I", "gene_name": "GlcAT-I", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P13002-6", "protein_name": "Protein grainyhead", "gene_name": "grh", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XZS3-1", "protein_name": "Translation machinery-associated protein 7 homolog", "gene_name": "CG13364", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O97394-1", "protein_name": "Protein sidekick", "gene_name": "sdk", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O77277-1", "protein_name": "Torsin-like protein", "gene_name": "Torsin", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P07207-1", "protein_name": "Neurogenic locus Notch protein", "gene_name": "N", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O76878-1", "protein_name": "RILP-like protein homolog", "gene_name": "Rilpl", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O46040-1", "protein_name": "SET domain-containing protein SmydA-8, isoform A", "gene_name": "SmydA-8", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O46077-1", "protein_name": "Odorant receptor 2a", "gene_name": "Or2a", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O46080-1", "protein_name": "Protein SMG9", "gene_name": "CG3857", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O46084-1", "protein_name": "Serine/threonine-protein phosphatase Pgam5, mitochondrial", "gene_name": "Pgam5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O46102-1", "protein_name": "Poly(A) RNA polymerase, mitochondrial", "gene_name": "MTPAP", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O77263-1", "protein_name": "tRNA (guanine-N(7)-)-methyltransferase", "gene_name": "Mettl1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O96838-1", "protein_name": "Putative 1-phosphatidylinositol 3-phosphate 5-kinase", "gene_name": "fab1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P07663-1", "protein_name": "Period circadian protein", "gene_name": "per", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P12297-2", "protein_name": "Protein suppressor of white apricot", "gene_name": "su(w[a])", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P18431-2", "protein_name": "Protein kinase shaggy", "gene_name": "sgg", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P22293-1", "protein_name": "Protein suppressor of sable", "gene_name": "su(sable)", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P38979-1", "protein_name": "Small ribosomal subunit protein uS2", "gene_name": "sta", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P39769-1", "protein_name": "Polyhomeotic-proximal chromatin protein", "gene_name": "ph-p", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40139-1", "protein_name": "Protein new-glue 2", "gene_name": "ng2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40140-1", "protein_name": "Protein new-glue 3", "gene_name": "ng3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "A1ZAK1-1", "protein_name": "Integrator complex subunit 8", "gene_name": "IntS8", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O97420-1", "protein_name": "UPF0184 protein CG14818", "gene_name": "EG:63B12.12", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P20153-1", "protein_name": "Protein ultraspiracle", "gene_name": "usp", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P09956-1", "protein_name": "Regulatory protein zeste", "gene_name": "z", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O01346-1", "protein_name": "Glycolipid beta-1,4-mannosyltransferase egh", "gene_name": "egh", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O46037-1", "protein_name": "Vinculin", "gene_name": "Vinc", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O46101-1", "protein_name": "Tetraspanin-2A", "gene_name": "Tsp2A", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O76908-1", "protein_name": "RING finger protein vilya", "gene_name": "vilya", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O97172-1", "protein_name": "UPF0729 protein CG18508", "gene_name": "CG18508", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P10090-1", "protein_name": "Protein white", "gene_name": "w", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P13468-1", "protein_name": "DNA-binding protein K10", "gene_name": "fs(1)K10", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P22808-1", "protein_name": "Homeobox protein vnd", "gene_name": "vnd", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P23938-1", "protein_name": "Protein new-glue 1", "gene_name": "ng1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40141-1", "protein_name": "Protein new-glue 4", "gene_name": "ng4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q24314-1", "protein_name": "Vacuolar protein sorting-associated protein 18 homolog", "gene_name": "dor", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9U1M2-1", "protein_name": "Transmembrane protein 120 homolog", "gene_name": "CG2716", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3J8-1", "protein_name": "Protein will die slowly", "gene_name": "wds", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7K7A9-1", "protein_name": "Flap endonuclease 1", "gene_name": "Fen1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q8IRW8-1", "protein_name": "Histone-lysine N-methyltransferase trr", "gene_name": "trr", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9NII1-1", "protein_name": "Double-stranded RNA-specific editase Adar", "gene_name": "Adar", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q24312-1", "protein_name": "DNA-binding protein Ewg", "gene_name": "ewg", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7KW14-1", "protein_name": "Coiled-coil domain-containing protein CG32809", "gene_name": "CG3737; CG3783; CG3791; EG:73D1.1; EG:9D2.2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P16914-1", "protein_name": "Protein elav", "gene_name": "elav", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P17886-1", "protein_name": "Protein crooked neck", "gene_name": "crn", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P18091-3", "protein_name": "Alpha-actinin, sarcomeric", "gene_name": "Actn", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P25028-1", "protein_name": "Mitosis initiation protein fs(1)Ya", "gene_name": "fs(1)Ya", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P41572-1", "protein_name": "6-phosphogluconate dehydrogenase, decarboxylating", "gene_name": "Pgd", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q24157-1", "protein_name": "Beta-1,4-mannosylglycolipid beta-1,3-N-acetylglucosaminyltransferase brn", "gene_name": "brn", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q27589-1", "protein_name": "Cytochrome P450 4d2", "gene_name": "Cyp4d2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7KW39-1", "protein_name": "Probable methylmalonate-semialdehyde/malonate-semialdehyde dehydrogenase [acylating], mitochondrial", "gene_name": "CG17896", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q8IRY7-1", "protein_name": "Caspase-8", "gene_name": "Dredd", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9UAS6-1", "protein_name": "Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2", "gene_name": "cmtr2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W594-1", "protein_name": "Putative gustatory receptor 2a", "gene_name": "Gr2a", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V410-1", "protein_name": "Leucine-zipper-like transcriptional regulator 1 homolog", "gene_name": "Lztr1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3S0-1", "protein_name": "Cytochrome P450 4g1", "gene_name": "Cyp4g1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W4M8-1", "protein_name": "Augmin complex subunit dgt4", "gene_name": "dgt4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W590-1", "protein_name": "Large subunit GTPase 1 homolog", "gene_name": "Ns3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P14599-1", "protein_name": "Amyloid-beta-like protein", "gene_name": "Appl", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P18824-1", "protein_name": "Armadillo segment polarity protein", "gene_name": "arm", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q8T4E1-1", "protein_name": "Putative GPI-anchor transamidase", "gene_name": "PIG-K", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9NEF6-1", "protein_name": "V-type proton ATPase subunit D 2", "gene_name": "Vha36-3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V439-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 22", "gene_name": "MED22", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W4T4-1", "protein_name": "3',5'-cyclic-AMP phosphodiesterase, isoform I", "gene_name": "Pde4; dnc", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W4Y2-1", "protein_name": "PDF receptor", "gene_name": "Pdfr", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W5E1-1", "protein_name": "RING-box protein 1A", "gene_name": "Roc1a", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XZT1-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 18", "gene_name": "MED18", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W4M9-1", "protein_name": "tRNA (cytosine(34)-C(5))-methyltransferase", "gene_name": "Nsun2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W4X9-1", "protein_name": "Centromere/kinetochore protein zw10", "gene_name": "Zw10", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W517-1", "protein_name": "Protein wings apart-like", "gene_name": "wapl", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W552-1", "protein_name": "Vacuolar protein sorting-associated protein 26", "gene_name": "Vps26", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W568-1", "protein_name": "Protein halfway", "gene_name": "hfw", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W5D0-1", "protein_name": "Uncharacterized protein CG43867", "gene_name": "CG14632", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7K4N3-1", "protein_name": "Nuclear cap-binding protein subunit 1", "gene_name": "Cbp80", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q960X4-1", "protein_name": "Histone acetyltransferase Tip60", "gene_name": "Tip60", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P50887-1", "protein_name": "Large ribosomal subunit protein eL22", "gene_name": "RpL22", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q00725-1", "protein_name": "Salivary glue protein Sgs-4", "gene_name": "Sgs4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W4V8-1", "protein_name": "Mitochondrial import inner membrane translocase subunit TIM50-C", "gene_name": "ttm50", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9Y0Y6-1", "protein_name": "Nuclear receptor-binding protein homolog", "gene_name": "Madm", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W534-1", "protein_name": "G protein-coupled receptor moody", "gene_name": "moody", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W539-1", "protein_name": "Hormone receptor 4", "gene_name": "Hr4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W5D4-1", "protein_name": "Protein O-mannosyl-transferase 2", "gene_name": "tw", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W4S7-1", "protein_name": "Myc proto-oncogene protein", "gene_name": "Myc", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W589-1", "protein_name": "GDP-fucose protein O-fucosyltransferase 2", "gene_name": "Ofut2", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O46341", "url": "https://www.uniprot.org/uniprotkb/O46341" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.10731137", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 127 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Control of the cell death pathway by Dapaf-1, a Drosophila Apaf-1/CED-4-related caspase activator.", "journal": "Mol. Cell", "date": "1999", "authors": "Kanuka H, Sawamoto K, Inohara N, Matsuno K, Okano H, Miura M", "reference": { "type": "PubMed", "id": "10619023", "url": "https://pubmed.ncbi.nlm.nih.gov/10619023" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O01382-1", "protein_name": "Caspase drICE", "gene_name": "Drice", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7KLI1-1", "protein_name": "Apoptosome protein Dark", "gene_name": "Dark", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O01382", "url": "https://www.uniprot.org/uniprotkb/O01382" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.10619023", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The Drosophila caspase DRONC is regulated by DIAP1.", "journal": "EMBO J.", "date": "2000", "authors": "Meier P, Silke J, Leevers S J, Evan G I", "reference": { "type": "PubMed", "id": "10675329", "url": "https://pubmed.ncbi.nlm.nih.gov/10675329" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O01382-1", "protein_name": "Caspase drICE", "gene_name": "Drice", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XYF4-1", "protein_name": "Caspase Dronc", "gene_name": "Dronc", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q24306-1", "protein_name": "Death-associated inhibitor of apoptosis 1", "gene_name": "Diap1", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O01382", "url": "https://www.uniprot.org/uniprotkb/O01382" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.10675329", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], 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}, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "DIAP2 functions as a mechanism-based regulator of drICE that contributes to the caspase activity threshold in living cells.", "journal": "The Journal of cell biology", "date": "2007", "authors": "Ribeiro PS, Kuranaga E, Tenev T, Leulier F, Miura M, Meier P", "reference": { "type": "PubMed", "id": "18166655", "url": "https://pubmed.ncbi.nlm.nih.gov/18166655" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O01382-1", "protein_name": "Caspase drICE", "gene_name": "Drice", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q24106-1", "protein_name": "Cell death protein hid", "gene_name": "hid", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q24570-1", "protein_name": "Cell death protein Grim", "gene_name": "grim", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q24307-1", "protein_name": "Death-associated inhibitor of apoptosis 2", "gene_name": "Diap2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q24475-1", "protein_name": "Cell death protein rpr", "gene_name": "rpr", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O01382", "url": "https://www.uniprot.org/uniprotkb/O01382" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "mutagenesis": [ { "start_pos": 211, "end_pos": 211, "sequence_org": "C", "sequence_mut": "A", "comment": "No effect on binding to Diap2 but may affect stability of complex formed with Diap2.", "evidence": [ { "database": "UniProtKB", "id": "O01382", "url": "https://www.uniprot.org/uniprotkb/O01382" }, { "database": "PubMed", "id": "18166655", "url": "https://pubmed.ncbi.nlm.nih.gov/18166655" } ], "uniprot_canonical_ac": "O01382-1" }, { "start_pos": 29, "end_pos": 29, "sequence_org": "A", "sequence_mut": "V", "comment": "Abolishes binding to Diap2 but has no effect on Drice processing or activity.", "evidence": [ { "database": "UniProtKB", "id": "O01382", "url": "https://www.uniprot.org/uniprotkb/O01382" }, { "database": "PubMed", "id": "18166655", "url": "https://pubmed.ncbi.nlm.nih.gov/18166655" } ], "uniprot_canonical_ac": "O01382-1" }, { "start_pos": 100, "end_pos": 100, "sequence_org": "D", "sequence_mut": "E", "comment": "Loss of caspase-mediated cleavage, failure to protect against Drice-mediated cell death and loss of binding to Drice.", "evidence": [ { "database": "UniProtKB", "id": "Q24307", "url": "https://www.uniprot.org/uniprotkb/Q24307" }, { "database": "PubMed", "id": "18166655", "url": "https://pubmed.ncbi.nlm.nih.gov/18166655" } ], "uniprot_canonical_ac": "Q24307-1" }, { "start_pos": 149, "end_pos": 149, "sequence_org": "C", "sequence_mut": "G", "comment": "No effect on binding to Drice or Dredd.", "evidence": [ { "database": "UniProtKB", "id": "Q24307", "url": "https://www.uniprot.org/uniprotkb/Q24307" }, { "database": "PubMed", "id": "18166655", "url": "https://pubmed.ncbi.nlm.nih.gov/18166655" }, { "database": "PubMed", "id": "22549468", "url": "https://pubmed.ncbi.nlm.nih.gov/22549468" } ], "uniprot_canonical_ac": "Q24307-1" }, { "start_pos": 163, "end_pos": 163, "sequence_org": "D", "sequence_mut": "A", "comment": "No effect on binding to Drice. Loss of immunity to Gram-negative bacteria; when associated with A-263.", "evidence": [ { "database": "UniProtKB", "id": "Q24307", "url": "https://www.uniprot.org/uniprotkb/Q24307" }, { "database": "PubMed", "id": "18166655", "url": "https://pubmed.ncbi.nlm.nih.gov/18166655" }, { "database": "PubMed", "id": "22549468", "url": "https://pubmed.ncbi.nlm.nih.gov/22549468" } ], "uniprot_canonical_ac": "Q24307-1" }, { "start_pos": 249, "end_pos": 249, "sequence_org": "C", "sequence_mut": "G", "comment": "Abolishes binding to Drice and fails to inhibit cell death. No effect on binding to Dredd.", "evidence": [ { "database": "UniProtKB", "id": "Q24307", "url": "https://www.uniprot.org/uniprotkb/Q24307" }, { "database": "PubMed", "id": "18166655", "url": "https://pubmed.ncbi.nlm.nih.gov/18166655" }, { "database": "PubMed", "id": "22549468", "url": "https://pubmed.ncbi.nlm.nih.gov/22549468" } ], "uniprot_canonical_ac": "Q24307-1" }, { "start_pos": 263, "end_pos": 263, "sequence_org": "D", "sequence_mut": "A", "comment": "Abolishes binding to Drice. Loss of immunity to Gram-negative bacteria; when associated with A-163.", "evidence": [ { "database": "UniProtKB", "id": "Q24307", "url": "https://www.uniprot.org/uniprotkb/Q24307" }, { "database": "PubMed", "id": "18166655", "url": "https://pubmed.ncbi.nlm.nih.gov/18166655" }, { "database": "PubMed", "id": "22549468", "url": "https://pubmed.ncbi.nlm.nih.gov/22549468" } ], "uniprot_canonical_ac": "Q24307-1" }, { "start_pos": 92, "end_pos": 92, "sequence_org": "D", "sequence_mut": "E", "comment": "No effect on caspase-mediated cleavage.", "evidence": [ { "database": "UniProtKB", "id": "Q24307", "url": "https://www.uniprot.org/uniprotkb/Q24307" }, { "database": "PubMed", "id": "18166655", "url": "https://pubmed.ncbi.nlm.nih.gov/18166655" } ], "uniprot_canonical_ac": "Q24307-1" } ], "record_id": "pubmed.18166655", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structure of the apoptosome: mechanistic insights into activation of an initiator caspase from Drosophila.", "journal": "Genes Dev.", "date": "2015", "authors": "Pang Yuxuan, Bai Xiao-chen, Yan Chuangye, Hao Qi, Chen Zheqin, Wang Jia-Wei, Scheres Sjors H W, Shi Yigong", "reference": { "type": "PubMed", "id": "25644603", "url": "https://pubmed.ncbi.nlm.nih.gov/25644603" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O01382-1", "protein_name": "Caspase drICE", "gene_name": "Drice", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7KLI1-1", 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0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of a Drosophila melanogaster ICE/CED-3-related protease, drICE.", "journal": "EMBO J.", "date": "1997", "authors": "Fraser A G, Evan G I", "reference": { "type": "PubMed", "id": "9184225", "url": "https://pubmed.ncbi.nlm.nih.gov/9184225" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O01382-1", "protein_name": "Caspase drICE", "gene_name": "Drice", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O01382", "url": "https://www.uniprot.org/uniprotkb/O01382" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.9184225", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", 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"count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of nuclear genes encoding mitochondrial proteins: isolation of a collection of D. melanogaster cDNAs homologous to sequences in the Human Gene Index database.", "journal": "Mol. Gen. Genet.", "date": "1999", "authors": "Caggese C, Ragone G, Perrini B, Moschetti R, De Pinto V, Caizzi R, Barsanti P", "reference": { "type": "PubMed", "id": "10071211", "url": "https://pubmed.ncbi.nlm.nih.gov/10071211" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O01666-1", "protein_name": "ATP synthase subunit gamma, mitochondrial", "gene_name": "ATPsyngamma", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q24251-1", "protein_name": "ATP synthase subunit d, mitochondrial", "gene_name": "ATPsynD", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q94511-1", "protein_name": "NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial", "gene_name": "ND-75", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q94519-1", "protein_name": "Acyl carrier protein, mitochondrial", "gene_name": "ND-ACP", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q24407-1", "protein_name": "ATP synthase-coupling factor 6, mitochondrial", "gene_name": "ATPsynCF6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O02649-1", "protein_name": "Heat shock protein 60A", "gene_name": "Hsp60A", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q94514-1", "protein_name": "Cytochrome c oxidase subunit 5A, mitochondrial", "gene_name": "COX5A", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P91928-1", "protein_name": "MICOS complex subunit Mic60", "gene_name": "Mitofilin", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q94920-1", "protein_name": "Voltage-dependent anion-selective channel", "gene_name": "porin", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q05825-1", "protein_name": "ATP synthase subunit beta, mitochondrial", "gene_name": "ATPsynbeta", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q24439-1", "protein_name": "ATP synthase subunit O, mitochondrial", "gene_name": "ATPsynO", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q94516-1", "protein_name": "ATP synthase subunit b, mitochondrial", "gene_name": "ATPsynB", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q94524-1", "protein_name": "Dynein light chain Tctex-type", "gene_name": "Dlc90F", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q94518-1", "protein_name": "Nascent polypeptide-associated complex subunit alpha", "gene_name": "Nacalpha", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P91929-1", "protein_name": "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial", "gene_name": "ND-42", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P91927-1", "protein_name": "Mitochondrial proton/calcium exchanger protein", "gene_name": "Letm1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q94522-1", "protein_name": "Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial", "gene_name": "Scsalpha1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q94523-1", "protein_name": "Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial", "gene_name": "SdhA", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O01666", "url": "https://www.uniprot.org/uniprotkb/O01666" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.10071211", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 18 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Hedgehog controls limb development by regulating the activities of distinct transcriptional activator and repressor forms of Cubitus interruptus.", "journal": "Cell", "date": "1999", "authors": "Methot N, Basler K", "reference": { "type": "PubMed", "id": "10102270", "url": "https://pubmed.ncbi.nlm.nih.gov/10102270" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O18413-1", "protein_name": "26S proteasome regulatory subunit 8", "gene_name": "Rpt6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P23647-1", "protein_name": "Serine/threonine-protein kinase fused", "gene_name": "fu", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7KLV9-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 11", "gene_name": "Rpn6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P36872-1", "protein_name": "Protein phosphatase PP2A 55 kDa regulatory subunit", "gene_name": "tws", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P48601-1", "protein_name": "26S proteasome regulatory subunit 4", "gene_name": "Rpt2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P36179-1", "protein_name": "Serine/threonine-protein phosphatase PP2A 65 kDa regulatory subunit", "gene_name": "Pp2A-29B", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P15357-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RpS27A", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P18101-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "RpL40", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V407-1", "protein_name": "Axin", "gene_name": "Axn", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3H2-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 14", "gene_name": "Rpn11", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V5C6-1", "protein_name": "Proteasome subunit alpha type-3", "gene_name": "Prosalpha7", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VUJ1-1", "protein_name": "Proteasome subunit beta", "gene_name": "Prosbeta2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VW54-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 2", "gene_name": "Rpn1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XZ61-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Uch-L5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O76324-1", "protein_name": "Discs overgrown protein kinase", "gene_name": "dco", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XYN7-1", "protein_name": "Proteasome subunit beta type-3", "gene_name": "Prosbeta3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XZJ4-1", "protein_name": "Proteasome subunit alpha type-6", "gene_name": "Prosalpha1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O16844-1", "protein_name": "Kinesin-like protein costa", "gene_name": "cos", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P19538-1", "protein_name": "Transcriptional activator cubitus interruptus", "gene_name": "ci", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P25161-1", "protein_name": "Probable 26S proteasome non-ATPase regulatory subunit 3", "gene_name": "Rpn3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O77430-1", "protein_name": "SKP1-related A, isoform A; SKP1-related A, isoform B; SKP1-related A, isoform C; SKP1-related A, isoform D; SKP1-related A, isoform E; SKP1-related A, isoform F; SKP1-related A, isoform G; SKP1-related A, isoform H; SKP1-related A, isoform I", "gene_name": "SkpA", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P12370-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit 1", "gene_name": "Pka-C1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P12881-1", "protein_name": "Proteasome subunit alpha type-1", "gene_name": "Prosalpha6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P18431-2", "protein_name": "Protein kinase shaggy", "gene_name": "sgg", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40301-1", "protein_name": "Proteasome subunit alpha type-2", "gene_name": "Prosalpha2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9Y1A7-1", "protein_name": "Minidiscs, isoform A; Minidiscs, isoform C; Minidiscs, isoform D", "gene_name": "mnd", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P26270-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 7", "gene_name": "Rpn8", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P25867-1", "protein_name": "Ubiquitin-conjugating enzyme E2-17 kDa", "gene_name": "eff", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P0CG69-1", "protein_name": "Polyubiquitin", "gene_name": "Ubi-p63E", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P22769-1", "protein_name": "Proteasome subunit alpha type-7-1", "gene_name": "Prosalpha4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P23696-1", "protein_name": "Serine/threonine-protein phosphatase PP2A", "gene_name": "mts", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40304-1", "protein_name": "Proteasome subunit beta type-1", "gene_name": "Prosbeta6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P54367-1", "protein_name": "Casein kinase I isoform alpha", "gene_name": "CkIalpha", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q24311-1", "protein_name": "Cullin homolog 1", "gene_name": "Cul1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3V6-1", "protein_name": "5.6.1.5; Regulatory particle triple-A ATPase 5", "gene_name": "Rpt5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P18824-1", "protein_name": "Armadillo segment polarity protein", "gene_name": "arm", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VKZ8-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Usp14", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V405-1", "protein_name": "26S proteasome regulatory subunit 6B", "gene_name": "Rpt3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9Y1T2-1", "protein_name": "Adenomatous polyposis coli 2, isoform A; Adenomatous polyposis coli 2, isoform C", "gene_name": "Apc2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V436-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 8", "gene_name": "Rpn12", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W5E1-1", "protein_name": "RING-box protein 1A", "gene_name": "Roc1a", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3Z4-1", "protein_name": "Regulatory particle non-ATPase 5", "gene_name": "Rpn5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3P6-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 1", "gene_name": "Rpn2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P55035-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 4", "gene_name": "Rpn10", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P91682-1", "protein_name": "Protein smoothened", "gene_name": "smo", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q95083-1", "protein_name": "Proteasome subunit alpha type-5", "gene_name": "Prosalpha5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3G7-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 6", "gene_name": "Rpn7", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VJJ0-1", "protein_name": "Proteasome subunit beta", "gene_name": "Prosbeta4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VM46-1", "protein_name": "Probable 26S proteasome complex subunit sem1", "gene_name": "Sem1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VNA5-1", "protein_name": "Proteasome subunit beta type-4", "gene_name": "Prosbeta7", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O18413", "url": "https://www.uniprot.org/uniprotkb/O18413" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.10102270", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 50 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { 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"n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Light-dependent sequestration of TIMELESS by CRYPTOCHROME.", "journal": "Science (New York, N.Y.)", "date": "1999", "authors": "Ceriani MF, Darlington TK, Staknis D, Mas P, Petti AA, Weitz CJ, Kay SA", "reference": { "type": "PubMed", "id": "10417378", "url": "https://pubmed.ncbi.nlm.nih.gov/10417378" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O18413-1", "protein_name": "26S proteasome regulatory subunit 8", "gene_name": "Rpt6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O61735-1", "protein_name": "Circadian locomoter output cycles protein kaput", "gene_name": "Clk", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7KLV9-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 11", "gene_name": "Rpn6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P48601-1", "protein_name": "26S proteasome regulatory subunit 4", "gene_name": "Rpt2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P15357-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RpS27A", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P18101-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "RpL40", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3H2-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 14", "gene_name": "Rpn11", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V5C6-1", "protein_name": "Proteasome subunit alpha type-3", "gene_name": "Prosalpha7", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VUJ1-1", "protein_name": "Proteasome subunit beta", "gene_name": "Prosbeta2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VW54-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 2", "gene_name": "Rpn1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XZ61-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Uch-L5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O76324-1", "protein_name": "Discs overgrown protein kinase", "gene_name": "dco", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O61734-1", "protein_name": "Protein cycle", "gene_name": "cyc", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XYN7-1", "protein_name": "Proteasome subunit beta type-3", "gene_name": "Prosbeta3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XZJ4-1", "protein_name": "Proteasome subunit alpha type-6", "gene_name": "Prosalpha1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P25161-1", "protein_name": "Probable 26S proteasome non-ATPase regulatory subunit 3", "gene_name": "Rpn3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O77059-1", "protein_name": "Cryptochrome-1", "gene_name": "cry", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P07663-1", "protein_name": "Period circadian protein", "gene_name": "per", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P12881-1", "protein_name": "Proteasome subunit alpha type-1", "gene_name": "Prosalpha6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40301-1", "protein_name": "Proteasome subunit alpha type-2", "gene_name": "Prosalpha2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9Y1A7-1", "protein_name": "Minidiscs, isoform A; Minidiscs, isoform C; Minidiscs, isoform D", "gene_name": "mnd", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P26270-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 7", "gene_name": "Rpn8", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P0CG69-1", "protein_name": "Polyubiquitin", "gene_name": "Ubi-p63E", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P22769-1", "protein_name": "Proteasome subunit alpha type-7-1", "gene_name": "Prosalpha4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40304-1", "protein_name": "Proteasome subunit beta type-1", "gene_name": "Prosbeta6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3V6-1", "protein_name": "5.6.1.5; Regulatory particle triple-A ATPase 5", "gene_name": "Rpt5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VKZ8-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Usp14", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V405-1", "protein_name": "26S proteasome regulatory subunit 6B", "gene_name": "Rpt3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V436-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 8", "gene_name": "Rpn12", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3Z4-1", "protein_name": "Regulatory particle non-ATPase 5", "gene_name": "Rpn5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3P6-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 1", "gene_name": "Rpn2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P55035-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 4", "gene_name": "Rpn10", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P49021-4", "protein_name": "Protein timeless", "gene_name": "tim", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q95083-1", "protein_name": "Proteasome subunit alpha type-5", "gene_name": "Prosalpha5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3G7-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 6", "gene_name": "Rpn7", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VJJ0-1", "protein_name": "Proteasome subunit beta", "gene_name": "Prosbeta4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VM46-1", "protein_name": "Probable 26S proteasome complex subunit sem1", "gene_name": "Sem1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VNA5-1", "protein_name": "Proteasome subunit beta type-4", "gene_name": "Prosbeta7", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O18413", "url": "https://www.uniprot.org/uniprotkb/O18413" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.10417378", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 38 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": 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[] } ] }, { "title": "Nuclear trafficking of Cubitus interruptus in the transcriptional regulation of Hedgehog target gene expression.", "journal": "Cell", "date": "1999", "authors": "Chen CH, von Kessler DP, Park W, Wang B, Ma Y, Beachy PA", "reference": { "type": "PubMed", "id": "10458606", "url": "https://pubmed.ncbi.nlm.nih.gov/10458606" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O18413-1", "protein_name": "26S proteasome regulatory subunit 8", "gene_name": "Rpt6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P23647-1", "protein_name": "Serine/threonine-protein kinase fused", "gene_name": "fu", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7KLV9-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 11", "gene_name": "Rpn6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P36872-1", "protein_name": "Protein phosphatase PP2A 55 kDa regulatory subunit", "gene_name": "tws", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P48601-1", "protein_name": "26S proteasome regulatory subunit 4", "gene_name": "Rpt2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P36179-1", "protein_name": "Serine/threonine-protein phosphatase PP2A 65 kDa regulatory subunit", "gene_name": "Pp2A-29B", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P15357-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RpS27A", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P18101-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "RpL40", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V407-1", "protein_name": "Axin", "gene_name": "Axn", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3H2-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 14", "gene_name": "Rpn11", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V5C6-1", "protein_name": "Proteasome subunit alpha type-3", "gene_name": "Prosalpha7", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VUJ1-1", "protein_name": "Proteasome subunit beta", "gene_name": "Prosbeta2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VW54-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 2", "gene_name": "Rpn1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XZ61-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Uch-L5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O76324-1", "protein_name": "Discs overgrown protein kinase", "gene_name": "dco", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XYN7-1", "protein_name": "Proteasome subunit beta type-3", "gene_name": "Prosbeta3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XZJ4-1", "protein_name": "Proteasome subunit alpha type-6", "gene_name": "Prosalpha1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O16844-1", "protein_name": "Kinesin-like protein costa", "gene_name": "cos", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P19538-1", "protein_name": "Transcriptional activator cubitus interruptus", "gene_name": "ci", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P25161-1", "protein_name": "Probable 26S proteasome non-ATPase regulatory subunit 3", "gene_name": "Rpn3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O77430-1", "protein_name": "SKP1-related A, isoform A; SKP1-related A, isoform B; SKP1-related A, isoform C; SKP1-related A, isoform D; SKP1-related A, isoform E; SKP1-related A, isoform F; SKP1-related A, isoform G; SKP1-related A, isoform H; SKP1-related A, isoform I", "gene_name": "SkpA", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P12370-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit 1", "gene_name": "Pka-C1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P12881-1", "protein_name": "Proteasome subunit alpha type-1", "gene_name": "Prosalpha6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P18431-2", "protein_name": "Protein kinase shaggy", "gene_name": "sgg", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40301-1", "protein_name": "Proteasome subunit alpha type-2", "gene_name": "Prosalpha2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9Y1A7-1", "protein_name": "Minidiscs, isoform A; Minidiscs, isoform C; Minidiscs, isoform D", "gene_name": "mnd", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P26270-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 7", "gene_name": "Rpn8", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P25867-1", "protein_name": "Ubiquitin-conjugating enzyme E2-17 kDa", "gene_name": "eff", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P0CG69-1", "protein_name": "Polyubiquitin", "gene_name": "Ubi-p63E", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P22769-1", "protein_name": "Proteasome subunit alpha type-7-1", "gene_name": "Prosalpha4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P23696-1", "protein_name": "Serine/threonine-protein phosphatase PP2A", "gene_name": "mts", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40304-1", "protein_name": "Proteasome subunit beta type-1", "gene_name": "Prosbeta6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P54367-1", "protein_name": "Casein kinase I isoform alpha", "gene_name": "CkIalpha", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q24311-1", "protein_name": "Cullin homolog 1", "gene_name": "Cul1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3V6-1", "protein_name": "5.6.1.5; Regulatory particle triple-A ATPase 5", "gene_name": "Rpt5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P18824-1", "protein_name": "Armadillo segment polarity protein", "gene_name": "arm", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VKZ8-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Usp14", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V405-1", "protein_name": "26S proteasome regulatory subunit 6B", "gene_name": "Rpt3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9Y1T2-1", "protein_name": "Adenomatous polyposis coli 2, isoform A; Adenomatous polyposis coli 2, isoform C", "gene_name": "Apc2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V436-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 8", "gene_name": "Rpn12", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W5E1-1", "protein_name": "RING-box protein 1A", "gene_name": "Roc1a", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3Z4-1", "protein_name": "Regulatory particle non-ATPase 5", "gene_name": "Rpn5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3P6-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 1", "gene_name": "Rpn2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P55035-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 4", "gene_name": "Rpn10", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P91682-1", "protein_name": "Protein smoothened", "gene_name": "smo", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q95083-1", "protein_name": "Proteasome subunit alpha type-5", "gene_name": "Prosalpha5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3G7-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 6", "gene_name": "Rpn7", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VJJ0-1", "protein_name": "Proteasome subunit beta", "gene_name": "Prosbeta4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VM46-1", "protein_name": "Probable 26S proteasome complex subunit sem1", "gene_name": "Sem1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VNA5-1", "protein_name": "Proteasome subunit beta type-4", "gene_name": "Prosbeta7", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O18413", "url": "https://www.uniprot.org/uniprotkb/O18413" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.10458606", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 50 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A role for the proteasome in the light response of the timeless clock protein.", "journal": "Science (New York, N.Y.)", "date": "1999", "authors": "Naidoo N, Song W, Hunter-Ensor M, Sehgal A", "reference": { "type": "PubMed", "id": "10481010", "url": "https://pubmed.ncbi.nlm.nih.gov/10481010" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O18413-1", "protein_name": "26S proteasome regulatory subunit 8", "gene_name": "Rpt6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O61735-1", "protein_name": "Circadian locomoter output cycles protein kaput", "gene_name": "Clk", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7KLV9-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 11", "gene_name": "Rpn6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P48601-1", "protein_name": "26S proteasome regulatory subunit 4", "gene_name": "Rpt2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P15357-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RpS27A", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P18101-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "RpL40", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3H2-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 14", "gene_name": "Rpn11", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V5C6-1", "protein_name": "Proteasome subunit alpha type-3", "gene_name": "Prosalpha7", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VUJ1-1", "protein_name": "Proteasome subunit beta", "gene_name": "Prosbeta2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VW54-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 2", "gene_name": "Rpn1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XZ61-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Uch-L5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O76324-1", "protein_name": "Discs overgrown protein kinase", "gene_name": "dco", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O61734-1", "protein_name": "Protein cycle", "gene_name": "cyc", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XYN7-1", "protein_name": "Proteasome subunit beta type-3", "gene_name": "Prosbeta3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XZJ4-1", "protein_name": "Proteasome subunit alpha type-6", "gene_name": "Prosalpha1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P25161-1", "protein_name": "Probable 26S proteasome non-ATPase regulatory subunit 3", "gene_name": "Rpn3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O77059-1", "protein_name": "Cryptochrome-1", "gene_name": "cry", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P07663-1", "protein_name": "Period circadian protein", "gene_name": "per", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P12881-1", "protein_name": "Proteasome subunit alpha type-1", "gene_name": "Prosalpha6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40301-1", "protein_name": "Proteasome subunit alpha type-2", "gene_name": "Prosalpha2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9Y1A7-1", "protein_name": "Minidiscs, isoform A; Minidiscs, isoform C; Minidiscs, isoform D", "gene_name": "mnd", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P26270-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 7", "gene_name": "Rpn8", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P0CG69-1", "protein_name": "Polyubiquitin", "gene_name": "Ubi-p63E", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P22769-1", "protein_name": "Proteasome subunit alpha type-7-1", "gene_name": "Prosalpha4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40304-1", "protein_name": "Proteasome subunit beta type-1", "gene_name": "Prosbeta6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3V6-1", "protein_name": "5.6.1.5; Regulatory particle triple-A ATPase 5", "gene_name": "Rpt5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VKZ8-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Usp14", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V405-1", "protein_name": "26S proteasome regulatory subunit 6B", "gene_name": "Rpt3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V436-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 8", "gene_name": "Rpn12", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3Z4-1", "protein_name": "Regulatory particle non-ATPase 5", "gene_name": "Rpn5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3P6-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 1", "gene_name": "Rpn2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P55035-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 4", "gene_name": "Rpn10", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P49021-4", "protein_name": "Protein timeless", "gene_name": "tim", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q95083-1", "protein_name": "Proteasome subunit alpha type-5", "gene_name": "Prosalpha5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3G7-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 6", "gene_name": "Rpn7", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VJJ0-1", "protein_name": "Proteasome subunit beta", "gene_name": "Prosbeta4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VM46-1", "protein_name": "Probable 26S proteasome complex subunit sem1", "gene_name": "Sem1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VNA5-1", "protein_name": "Proteasome subunit beta type-4", "gene_name": "Prosbeta7", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O18413", "url": "https://www.uniprot.org/uniprotkb/O18413" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.10481010", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 38 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": 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[] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Photic signaling by cryptochrome in the Drosophila circadian system.", "journal": "Molecular and cellular biology", "date": "2001", "authors": "Lin FJ, Song W, Meyer-Bernstein E, Naidoo N, Sehgal A", "reference": { "type": "PubMed", "id": "11585911", "url": "https://pubmed.ncbi.nlm.nih.gov/11585911" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O18413-1", "protein_name": "26S proteasome regulatory subunit 8", "gene_name": "Rpt6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O61735-1", "protein_name": "Circadian locomoter output cycles protein kaput", "gene_name": "Clk", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7KLV9-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 11", "gene_name": "Rpn6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P48601-1", "protein_name": "26S proteasome regulatory subunit 4", "gene_name": "Rpt2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P15357-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RpS27A", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P18101-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "RpL40", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3H2-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 14", "gene_name": "Rpn11", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V5C6-1", "protein_name": "Proteasome subunit alpha type-3", "gene_name": "Prosalpha7", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VUJ1-1", "protein_name": "Proteasome subunit beta", "gene_name": "Prosbeta2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VW54-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 2", "gene_name": "Rpn1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XZ61-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Uch-L5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O76324-1", "protein_name": "Discs overgrown protein kinase", "gene_name": "dco", 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"tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VKZ8-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Usp14", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V405-1", "protein_name": "26S proteasome regulatory subunit 6B", "gene_name": "Rpt3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V436-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 8", "gene_name": "Rpn12", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3Z4-1", "protein_name": "Regulatory particle non-ATPase 5", "gene_name": "Rpn5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3P6-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 1", "gene_name": "Rpn2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P55035-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 4", "gene_name": "Rpn10", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P49021-4", "protein_name": "Protein timeless", "gene_name": 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Degrading Ci: who is Cul-pable?", "journal": "Genes & development", "date": "2002", "authors": "Jiang J", "reference": { "type": "PubMed", "id": 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"tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P15357-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RpS27A", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P18101-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "RpL40", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V407-1", "protein_name": "Axin", "gene_name": "Axn", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3H2-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 14", "gene_name": "Rpn11", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V5C6-1", "protein_name": "Proteasome subunit alpha type-3", "gene_name": "Prosalpha7", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VUJ1-1", "protein_name": "Proteasome subunit beta", "gene_name": "Prosbeta2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VW54-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 2", "gene_name": "Rpn1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XZ61-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Uch-L5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O76324-1", "protein_name": "Discs overgrown protein kinase", "gene_name": "dco", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XYN7-1", "protein_name": "Proteasome subunit beta type-3", "gene_name": "Prosbeta3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XZJ4-1", "protein_name": "Proteasome subunit alpha type-6", "gene_name": "Prosalpha1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O16844-1", "protein_name": "Kinesin-like protein costa", "gene_name": "cos", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P19538-1", "protein_name": "Transcriptional activator cubitus interruptus", "gene_name": "ci", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P25161-1", "protein_name": "Probable 26S proteasome non-ATPase regulatory subunit 3", "gene_name": "Rpn3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O77430-1", "protein_name": "SKP1-related A, isoform A; SKP1-related A, isoform B; SKP1-related A, isoform C; SKP1-related A, isoform D; SKP1-related A, isoform E; SKP1-related A, isoform F; SKP1-related A, isoform G; SKP1-related A, isoform H; SKP1-related A, isoform I", "gene_name": "SkpA", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P12370-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit 1", "gene_name": "Pka-C1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P12881-1", "protein_name": "Proteasome subunit alpha type-1", "gene_name": "Prosalpha6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P18431-2", "protein_name": "Protein kinase shaggy", "gene_name": "sgg", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40301-1", "protein_name": "Proteasome subunit alpha type-2", "gene_name": "Prosalpha2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9Y1A7-1", "protein_name": "Minidiscs, isoform A; Minidiscs, isoform C; Minidiscs, isoform D", "gene_name": "mnd", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P26270-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 7", "gene_name": "Rpn8", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P25867-1", "protein_name": "Ubiquitin-conjugating enzyme E2-17 kDa", "gene_name": "eff", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P0CG69-1", "protein_name": "Polyubiquitin", "gene_name": "Ubi-p63E", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P22769-1", "protein_name": "Proteasome subunit alpha type-7-1", "gene_name": "Prosalpha4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P23696-1", "protein_name": "Serine/threonine-protein phosphatase PP2A", "gene_name": "mts", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40304-1", "protein_name": "Proteasome subunit beta type-1", "gene_name": "Prosbeta6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P54367-1", "protein_name": "Casein kinase I isoform alpha", "gene_name": "CkIalpha", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q24311-1", "protein_name": "Cullin homolog 1", "gene_name": "Cul1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3V6-1", "protein_name": "5.6.1.5; Regulatory particle triple-A ATPase 5", "gene_name": "Rpt5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P18824-1", "protein_name": "Armadillo segment polarity protein", "gene_name": "arm", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VKZ8-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Usp14", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V405-1", "protein_name": "26S proteasome regulatory subunit 6B", "gene_name": "Rpt3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9Y1T2-1", "protein_name": "Adenomatous polyposis coli 2, isoform A; Adenomatous polyposis coli 2, isoform C", "gene_name": "Apc2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V436-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 8", "gene_name": "Rpn12", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W5E1-1", "protein_name": "RING-box protein 1A", "gene_name": "Roc1a", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3Z4-1", "protein_name": "Regulatory particle non-ATPase 5", "gene_name": "Rpn5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3P6-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 1", "gene_name": "Rpn2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P55035-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 4", "gene_name": "Rpn10", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q95083-1", "protein_name": "Proteasome subunit alpha type-5", "gene_name": "Prosalpha5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3G7-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 6", "gene_name": "Rpn7", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VJJ0-1", "protein_name": "Proteasome subunit beta", "gene_name": "Prosbeta4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VM46-1", "protein_name": "Probable 26S proteasome complex subunit sem1", "gene_name": "Sem1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VNA5-1", "protein_name": "Proteasome subunit beta type-4", "gene_name": "Prosbeta7", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O18413", "url": "https://www.uniprot.org/uniprotkb/O18413" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.12231619", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 49 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { 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"n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The F-box protein slimb controls the levels of clock proteins period and timeless.", "journal": "Nature", "date": "2002", "authors": "Grima B, Lamouroux A, Chelot E, Papin C, Limbourg-Bouchon B, Rouyer F", "reference": { "type": "PubMed", "id": "12432393", "url": "https://pubmed.ncbi.nlm.nih.gov/12432393" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O18413-1", "protein_name": "26S proteasome regulatory subunit 8", "gene_name": "Rpt6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O61735-1", "protein_name": "Circadian locomoter output cycles protein kaput", "gene_name": "Clk", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7KLV9-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 11", "gene_name": "Rpn6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P36872-1", "protein_name": "Protein phosphatase PP2A 55 kDa regulatory subunit", "gene_name": "tws", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P48601-1", "protein_name": "26S proteasome regulatory subunit 4", "gene_name": "Rpt2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P08181-1", "protein_name": "Casein kinase II subunit alpha", "gene_name": "CkIIalpha", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P36179-1", "protein_name": "Serine/threonine-protein phosphatase PP2A 65 kDa regulatory subunit", "gene_name": "Pp2A-29B", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P11346-1", "protein_name": "Raf homolog serine/threonine-protein kinase Raf", "gene_name": "Raf", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P15357-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RpS27A", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P18101-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "RpL40", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P92177-3", "protein_name": "14-3-3 protein epsilon", "gene_name": "14-3-3epsilon", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V407-1", "protein_name": "Axin", "gene_name": "Axn", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3H2-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 14", "gene_name": "Rpn11", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V5C6-1", "protein_name": "Proteasome subunit alpha type-3", "gene_name": "Prosalpha7", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VUJ1-1", "protein_name": "Proteasome subunit beta", "gene_name": "Prosbeta2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VW54-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 2", "gene_name": "Rpn1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XZ61-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Uch-L5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O76324-1", "protein_name": "Discs overgrown protein kinase", "gene_name": "dco", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P08182-1", "protein_name": "Casein kinase II subunit beta", "gene_name": "CkIIbeta", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O61734-1", "protein_name": "Protein cycle", "gene_name": "cyc", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XYN7-1", "protein_name": "Proteasome subunit beta type-3", "gene_name": "Prosbeta3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XZJ4-1", "protein_name": "Proteasome subunit alpha type-6", "gene_name": "Prosalpha1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P25161-1", "protein_name": "Probable 26S proteasome non-ATPase regulatory subunit 3", "gene_name": "Rpn3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O77059-1", "protein_name": "Cryptochrome-1", "gene_name": "cry", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P07663-1", "protein_name": "Period circadian protein", "gene_name": "per", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P08646-1", "protein_name": "Ras-like protein 1", "gene_name": "Ras85D", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P12881-1", "protein_name": "Proteasome subunit alpha type-1", "gene_name": "Prosalpha6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P18431-2", "protein_name": "Protein kinase shaggy", "gene_name": "sgg", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40301-1", "protein_name": "Proteasome subunit alpha type-2", "gene_name": "Prosalpha2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9Y1A7-1", "protein_name": "Minidiscs, isoform A; Minidiscs, isoform C; Minidiscs, isoform D", "gene_name": "mnd", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P26270-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 7", "gene_name": "Rpn8", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P0CG69-1", "protein_name": "Polyubiquitin", "gene_name": "Ubi-p63E", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P22769-1", "protein_name": "Proteasome subunit alpha type-7-1", "gene_name": "Prosalpha4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P23696-1", "protein_name": "Serine/threonine-protein phosphatase PP2A", "gene_name": "mts", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40304-1", "protein_name": "Proteasome subunit beta type-1", "gene_name": "Prosbeta6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P54367-1", "protein_name": "Casein kinase I isoform alpha", "gene_name": "CkIalpha", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q24324-1", "protein_name": "Dual specificity mitogen-activated protein kinase kinase dSOR1", "gene_name": "Dsor1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3V6-1", "protein_name": "5.6.1.5; Regulatory particle triple-A ATPase 5", "gene_name": "Rpt5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q8ML92-1", "protein_name": "Protein aveugle", "gene_name": "ave", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VKZ8-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Usp14", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V405-1", "protein_name": "26S proteasome regulatory subunit 6B", "gene_name": "Rpt3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9Y1T2-1", "protein_name": "Adenomatous polyposis coli 2, isoform A; Adenomatous polyposis coli 2, isoform C", "gene_name": "Apc2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V436-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 8", "gene_name": "Rpn12", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3Z4-1", "protein_name": "Regulatory particle non-ATPase 5", "gene_name": "Rpn5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3P6-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 1", "gene_name": "Rpn2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V9J3-1", "protein_name": "Tyrosine-protein kinase Src42A", "gene_name": "Src42A", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P55035-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 4", "gene_name": "Rpn10", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P49021-4", "protein_name": "Protein timeless", "gene_name": "tim", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q95083-1", "protein_name": "Proteasome subunit alpha type-5", "gene_name": "Prosalpha5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3G7-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 6", "gene_name": "Rpn7", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VJJ0-1", "protein_name": "Proteasome subunit beta", "gene_name": "Prosbeta4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VM46-1", "protein_name": "Probable 26S proteasome complex subunit sem1", "gene_name": "Sem1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VNA5-1", "protein_name": "Proteasome subunit beta type-4", "gene_name": "Prosbeta7", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O18413", "url": "https://www.uniprot.org/uniprotkb/O18413" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.12432393", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], 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"url": "https://www.uniprot.org/uniprotkb/O18413" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.12973300", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 32 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Roles of the two Drosophila CRYPTOCHROME structural domains in circadian photoreception.", "journal": "Science (New York, N.Y.)", "date": "2004", "authors": "Busza A, Emery-Le M, Rosbash M, Emery P", "reference": { "type": "PubMed", "id": "15178801", "url": "https://pubmed.ncbi.nlm.nih.gov/15178801" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O18413-1", "protein_name": "26S proteasome regulatory subunit 8", "gene_name": "Rpt6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O61735-1", "protein_name": "Circadian locomoter output cycles protein kaput", "gene_name": "Clk", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7KLV9-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 11", "gene_name": "Rpn6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P48601-1", "protein_name": "26S proteasome regulatory subunit 4", "gene_name": "Rpt2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P15357-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RpS27A", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P18101-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "RpL40", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3H2-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 14", "gene_name": "Rpn11", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V5C6-1", "protein_name": "Proteasome subunit alpha type-3", "gene_name": "Prosalpha7", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VUJ1-1", "protein_name": "Proteasome subunit beta", "gene_name": "Prosbeta2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VW54-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 2", "gene_name": "Rpn1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XZ61-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Uch-L5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O76324-1", "protein_name": "Discs overgrown protein kinase", "gene_name": "dco", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O61734-1", "protein_name": "Protein cycle", "gene_name": "cyc", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XYN7-1", "protein_name": "Proteasome subunit beta type-3", "gene_name": "Prosbeta3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XZJ4-1", "protein_name": "Proteasome subunit alpha type-6", "gene_name": "Prosalpha1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P25161-1", "protein_name": "Probable 26S proteasome non-ATPase regulatory subunit 3", "gene_name": "Rpn3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O77059-1", "protein_name": "Cryptochrome-1", "gene_name": "cry", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P07663-1", "protein_name": "Period circadian protein", "gene_name": "per", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P12881-1", "protein_name": "Proteasome subunit alpha type-1", "gene_name": "Prosalpha6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40301-1", "protein_name": "Proteasome subunit alpha type-2", "gene_name": "Prosalpha2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9Y1A7-1", "protein_name": "Minidiscs, isoform A; Minidiscs, isoform C; Minidiscs, isoform D", "gene_name": "mnd", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P26270-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 7", "gene_name": "Rpn8", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P0CG69-1", "protein_name": "Polyubiquitin", "gene_name": "Ubi-p63E", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P22769-1", "protein_name": "Proteasome subunit alpha type-7-1", "gene_name": "Prosalpha4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40304-1", "protein_name": "Proteasome subunit beta type-1", "gene_name": "Prosbeta6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3V6-1", "protein_name": "5.6.1.5; Regulatory particle triple-A ATPase 5", "gene_name": "Rpt5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VKZ8-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Usp14", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V405-1", "protein_name": "26S proteasome regulatory subunit 6B", "gene_name": "Rpt3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V436-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 8", "gene_name": "Rpn12", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3Z4-1", "protein_name": "Regulatory particle non-ATPase 5", "gene_name": "Rpn5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3P6-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 1", "gene_name": "Rpn2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P55035-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 4", "gene_name": "Rpn10", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P49021-4", "protein_name": "Protein timeless", "gene_name": "tim", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q95083-1", "protein_name": "Proteasome subunit alpha type-5", "gene_name": "Prosalpha5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3G7-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 6", "gene_name": "Rpn7", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VJJ0-1", "protein_name": "Proteasome subunit beta", "gene_name": "Prosbeta4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VM46-1", "protein_name": "Probable 26S proteasome complex subunit sem1", "gene_name": "Sem1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VNA5-1", "protein_name": "Proteasome subunit beta type-4", "gene_name": "Prosbeta7", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O18413", "url": "https://www.uniprot.org/uniprotkb/O18413" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.15178801", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 38 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A constitutively active cryptochrome in Drosophila melanogaster.", "journal": "Nature neuroscience", "date": "2004", "authors": "Dissel S, Codd V, Fedic R, Garner KJ, Costa R, Kyriacou CP, Rosato E", "reference": { "type": "PubMed", "id": "15258584", "url": "https://pubmed.ncbi.nlm.nih.gov/15258584" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O18413-1", "protein_name": "26S proteasome regulatory subunit 8", "gene_name": "Rpt6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O61735-1", "protein_name": "Circadian locomoter output cycles protein kaput", "gene_name": "Clk", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7KLV9-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 11", "gene_name": "Rpn6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P48601-1", "protein_name": "26S proteasome regulatory subunit 4", "gene_name": "Rpt2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P15357-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RpS27A", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P18101-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "RpL40", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3H2-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 14", "gene_name": "Rpn11", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V5C6-1", "protein_name": "Proteasome subunit alpha type-3", "gene_name": "Prosalpha7", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VUJ1-1", "protein_name": "Proteasome subunit beta", "gene_name": "Prosbeta2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VW54-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 2", "gene_name": "Rpn1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XZ61-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Uch-L5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O76324-1", "protein_name": "Discs overgrown protein kinase", "gene_name": "dco", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O61734-1", "protein_name": "Protein cycle", "gene_name": "cyc", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XYN7-1", "protein_name": "Proteasome subunit beta type-3", "gene_name": "Prosbeta3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XZJ4-1", "protein_name": "Proteasome subunit alpha type-6", "gene_name": "Prosalpha1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P25161-1", "protein_name": "Probable 26S proteasome non-ATPase regulatory subunit 3", "gene_name": "Rpn3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O77059-1", "protein_name": "Cryptochrome-1", "gene_name": "cry", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P07663-1", "protein_name": "Period circadian protein", "gene_name": "per", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P12881-1", "protein_name": "Proteasome subunit alpha type-1", "gene_name": "Prosalpha6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40301-1", "protein_name": "Proteasome subunit alpha type-2", "gene_name": "Prosalpha2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9Y1A7-1", "protein_name": "Minidiscs, isoform A; Minidiscs, isoform C; Minidiscs, isoform D", "gene_name": "mnd", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P26270-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 7", "gene_name": "Rpn8", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P0CG69-1", "protein_name": "Polyubiquitin", "gene_name": "Ubi-p63E", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P22769-1", "protein_name": "Proteasome subunit alpha type-7-1", "gene_name": "Prosalpha4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40304-1", "protein_name": "Proteasome subunit beta type-1", "gene_name": "Prosbeta6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3V6-1", "protein_name": "5.6.1.5; Regulatory particle triple-A ATPase 5", "gene_name": "Rpt5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VKZ8-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Usp14", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V405-1", "protein_name": "26S proteasome regulatory subunit 6B", "gene_name": "Rpt3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V436-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 8", "gene_name": "Rpn12", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3Z4-1", "protein_name": "Regulatory particle non-ATPase 5", "gene_name": "Rpn5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3P6-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 1", "gene_name": "Rpn2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P55035-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 4", "gene_name": "Rpn10", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P49021-4", "protein_name": "Protein timeless", "gene_name": "tim", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q95083-1", "protein_name": "Proteasome subunit alpha type-5", "gene_name": "Prosalpha5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3G7-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 6", "gene_name": "Rpn7", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VJJ0-1", "protein_name": "Proteasome subunit beta", "gene_name": "Prosbeta4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VM46-1", "protein_name": "Probable 26S proteasome complex subunit sem1", "gene_name": "Sem1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VNA5-1", "protein_name": "Proteasome subunit beta type-4", "gene_name": "Prosbeta7", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O18413", "url": "https://www.uniprot.org/uniprotkb/O18413" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.15258584", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 38 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Targeted disruption of Drosophila Roc1b reveals functional differences in the Roc subunit of Cullin-dependent E3 ubiquitin ligases.", "journal": "Molecular biology of the cell", "date": "2004", "authors": "Donaldson TD, Noureddine MA, Reynolds PJ, Bradford W, Duronio RJ", "reference": { "type": "PubMed", "id": "15331761", "url": "https://pubmed.ncbi.nlm.nih.gov/15331761" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O18413-1", "protein_name": "26S proteasome regulatory subunit 8", "gene_name": "Rpt6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7KLV9-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 11", "gene_name": "Rpn6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P48601-1", "protein_name": "26S proteasome regulatory subunit 4", "gene_name": "Rpt2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P15357-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RpS27A", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9NHX0-1", "protein_name": "RING-box protein 1B", "gene_name": "Roc1b", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3H2-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 14", "gene_name": "Rpn11", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V5C6-1", "protein_name": "Proteasome subunit alpha type-3", "gene_name": "Prosalpha7", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VUJ1-1", "protein_name": "Proteasome subunit beta", "gene_name": "Prosbeta2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VW54-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 2", "gene_name": "Rpn1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XZ61-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Uch-L5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XYN7-1", "protein_name": "Proteasome subunit beta type-3", "gene_name": "Prosbeta3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XZJ4-1", "protein_name": "Proteasome subunit alpha type-6", "gene_name": "Prosalpha1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P19538-1", "protein_name": "Transcriptional activator cubitus interruptus", "gene_name": "ci", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P25161-1", "protein_name": "Probable 26S proteasome non-ATPase regulatory subunit 3", "gene_name": "Rpn3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P12881-1", "protein_name": "Proteasome subunit alpha type-1", "gene_name": "Prosalpha6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40301-1", "protein_name": "Proteasome subunit alpha type-2", "gene_name": "Prosalpha2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9Y1A7-1", "protein_name": "Minidiscs, isoform A; Minidiscs, isoform C; Minidiscs, isoform D", "gene_name": "mnd", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P26270-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 7", "gene_name": "Rpn8", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P0CG69-1", "protein_name": "Polyubiquitin", "gene_name": "Ubi-p63E", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P22769-1", "protein_name": "Proteasome subunit alpha type-7-1", "gene_name": "Prosalpha4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40304-1", "protein_name": "Proteasome subunit beta type-1", "gene_name": "Prosbeta6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3V6-1", "protein_name": "5.6.1.5; Regulatory particle triple-A ATPase 5", "gene_name": "Rpt5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VKZ8-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Usp14", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V405-1", "protein_name": "26S proteasome regulatory subunit 6B", "gene_name": "Rpt3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V436-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 8", "gene_name": "Rpn12", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q8IP45-1", "protein_name": "Cullin 3, isoform F", "gene_name": "Cul3", "tax_name": "Fruit 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{ "uniprot_canonical_ac": "Q9VM46-1", "protein_name": "Probable 26S proteasome complex subunit sem1", "gene_name": "Sem1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VNA5-1", "protein_name": "Proteasome subunit beta type-4", "gene_name": "Prosbeta7", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O18413", "url": "https://www.uniprot.org/uniprotkb/O18413" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.15331761", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 35 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The circadian timekeeping system of Drosophila.", "journal": "Current biology : CB", "date": "2005", "authors": "Hardin PE", "reference": { "type": "PubMed", "id": "16139204", "url": "https://pubmed.ncbi.nlm.nih.gov/16139204" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O18413-1", "protein_name": "26S proteasome regulatory subunit 8", "gene_name": "Rpt6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O61735-1", "protein_name": "Circadian locomoter output cycles protein kaput", "gene_name": "Clk", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7KLV9-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 11", "gene_name": "Rpn6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P48601-1", "protein_name": "26S proteasome regulatory subunit 4", "gene_name": "Rpt2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P36179-1", "protein_name": "Serine/threonine-protein phosphatase PP2A 65 kDa regulatory subunit", "gene_name": "Pp2A-29B", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3H2-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 14", "gene_name": "Rpn11", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V5C6-1", "protein_name": "Proteasome subunit alpha type-3", "gene_name": "Prosalpha7", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VUJ1-1", "protein_name": "Proteasome subunit beta", "gene_name": "Prosbeta2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VW54-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 2", "gene_name": "Rpn1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XZ61-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Uch-L5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O61734-1", "protein_name": "Protein cycle", "gene_name": "cyc", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XYN7-1", "protein_name": "Proteasome subunit beta type-3", "gene_name": "Prosbeta3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XZJ4-1", "protein_name": "Proteasome subunit alpha type-6", "gene_name": "Prosalpha1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P25161-1", "protein_name": "Probable 26S proteasome non-ATPase regulatory subunit 3", "gene_name": "Rpn3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P12881-1", "protein_name": "Proteasome subunit alpha type-1", "gene_name": "Prosalpha6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40301-1", "protein_name": "Proteasome subunit alpha type-2", "gene_name": "Prosalpha2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9Y1A7-1", "protein_name": "Minidiscs, isoform A; Minidiscs, isoform C; Minidiscs, isoform D", "gene_name": "mnd", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P26270-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 7", "gene_name": "Rpn8", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P22769-1", "protein_name": "Proteasome subunit alpha type-7-1", "gene_name": "Prosalpha4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P23696-1", "protein_name": "Serine/threonine-protein phosphatase PP2A", "gene_name": "mts", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40304-1", "protein_name": "Proteasome subunit beta type-1", "gene_name": "Prosbeta6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3V6-1", "protein_name": "5.6.1.5; Regulatory particle triple-A ATPase 5", "gene_name": "Rpt5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VKZ8-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Usp14", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V405-1", "protein_name": "26S proteasome regulatory subunit 6B", "gene_name": "Rpt3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V436-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 8", "gene_name": "Rpn12", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "A0A6F7R657-1", "protein_name": "Widerborst, isoform H", "gene_name": "wdb", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3Z4-1", "protein_name": "Regulatory particle non-ATPase 5", "gene_name": "Rpn5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3P6-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 1", "gene_name": "Rpn2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P55035-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 4", "gene_name": "Rpn10", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q95083-1", "protein_name": "Proteasome subunit alpha type-5", "gene_name": "Prosalpha5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3G7-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 6", "gene_name": "Rpn7", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VJJ0-1", "protein_name": "Proteasome subunit beta", "gene_name": "Prosbeta4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VM46-1", "protein_name": "Probable 26S proteasome complex subunit sem1", "gene_name": "Sem1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VNA5-1", "protein_name": "Proteasome subunit beta type-4", "gene_name": "Prosbeta7", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O18413", "url": "https://www.uniprot.org/uniprotkb/O18413" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.16139204", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 34 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A conserved processing mechanism regulates the activity of transcription factors Cubitus interruptus and NF-kappaB.", "journal": "Nature structural & molecular biology", "date": "2005", "authors": "Tian L, Holmgren RA, Matouschek A", "reference": { "type": "PubMed", "id": "16299518", "url": "https://pubmed.ncbi.nlm.nih.gov/16299518" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O18413-1", "protein_name": "26S proteasome regulatory subunit 8", "gene_name": "Rpt6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P23647-1", "protein_name": "Serine/threonine-protein kinase fused", "gene_name": "fu", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7KLV9-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 11", "gene_name": "Rpn6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P36872-1", "protein_name": "Protein phosphatase PP2A 55 kDa regulatory subunit", "gene_name": "tws", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P48601-1", "protein_name": "26S proteasome regulatory subunit 4", "gene_name": "Rpt2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P36179-1", "protein_name": "Serine/threonine-protein phosphatase PP2A 65 kDa regulatory subunit", 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2", "gene_name": "Rpn1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XZ61-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Uch-L5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O76324-1", "protein_name": "Discs overgrown protein kinase", "gene_name": "dco", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XYN7-1", "protein_name": "Proteasome subunit beta type-3", "gene_name": "Prosbeta3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XZJ4-1", "protein_name": "Proteasome subunit alpha type-6", "gene_name": "Prosalpha1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O16844-1", "protein_name": "Kinesin-like protein costa", "gene_name": "cos", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P19538-1", "protein_name": "Transcriptional activator cubitus interruptus", "gene_name": "ci", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P25161-1", "protein_name": "Probable 26S proteasome non-ATPase regulatory subunit 3", "gene_name": "Rpn3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O77430-1", "protein_name": "SKP1-related A, isoform A; SKP1-related A, isoform B; SKP1-related A, isoform C; SKP1-related A, isoform D; SKP1-related A, isoform E; SKP1-related A, isoform F; SKP1-related A, isoform G; SKP1-related A, isoform H; SKP1-related A, isoform I", "gene_name": "SkpA", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P12370-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit 1", "gene_name": "Pka-C1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P12881-1", "protein_name": "Proteasome subunit alpha type-1", "gene_name": "Prosalpha6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P18431-2", "protein_name": "Protein kinase shaggy", "gene_name": "sgg", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40301-1", "protein_name": "Proteasome subunit alpha type-2", "gene_name": "Prosalpha2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9Y1A7-1", "protein_name": "Minidiscs, isoform A; Minidiscs, isoform C; Minidiscs, isoform D", "gene_name": "mnd", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P26270-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 7", "gene_name": "Rpn8", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P25867-1", "protein_name": "Ubiquitin-conjugating enzyme E2-17 kDa", "gene_name": "eff", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P0CG69-1", "protein_name": "Polyubiquitin", "gene_name": "Ubi-p63E", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P22769-1", "protein_name": "Proteasome subunit alpha type-7-1", "gene_name": "Prosalpha4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P23696-1", "protein_name": "Serine/threonine-protein phosphatase PP2A", "gene_name": "mts", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40304-1", "protein_name": "Proteasome subunit beta type-1", "gene_name": "Prosbeta6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P54367-1", "protein_name": "Casein kinase I isoform alpha", "gene_name": "CkIalpha", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q24311-1", "protein_name": "Cullin homolog 1", "gene_name": "Cul1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3V6-1", "protein_name": "5.6.1.5; Regulatory particle triple-A ATPase 5", "gene_name": "Rpt5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P18824-1", "protein_name": "Armadillo segment polarity protein", "gene_name": "arm", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VKZ8-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Usp14", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V405-1", "protein_name": "26S proteasome regulatory subunit 6B", "gene_name": "Rpt3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9Y1T2-1", "protein_name": "Adenomatous polyposis coli 2, isoform A; Adenomatous polyposis coli 2, isoform C", "gene_name": "Apc2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V436-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 8", "gene_name": "Rpn12", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W5E1-1", "protein_name": "RING-box protein 1A", "gene_name": "Roc1a", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3Z4-1", "protein_name": "Regulatory particle non-ATPase 5", "gene_name": "Rpn5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3P6-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 1", "gene_name": "Rpn2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P55035-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 4", "gene_name": "Rpn10", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q95083-1", "protein_name": "Proteasome subunit alpha type-5", "gene_name": "Prosalpha5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3G7-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 6", "gene_name": "Rpn7", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VJJ0-1", "protein_name": "Proteasome subunit beta", "gene_name": "Prosbeta4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VM46-1", "protein_name": "Probable 26S proteasome complex subunit sem1", "gene_name": "Sem1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VNA5-1", "protein_name": "Proteasome subunit beta type-4", "gene_name": "Prosbeta7", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O18413", "url": "https://www.uniprot.org/uniprotkb/O18413" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.16299518", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 49 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Phosphorylation by double-time/CKIepsilon and CKIalpha targets cubitus interruptus for Slimb/beta-TRCP-mediated proteolytic processing.", "journal": "Developmental cell", "date": "2005", "authors": "Jia J, Zhang L, Zhang Q, Tong C, Wang B, Hou F, Amanai K, Jiang J", "reference": { "type": "PubMed", "id": "16326393", "url": "https://pubmed.ncbi.nlm.nih.gov/16326393" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O18413-1", "protein_name": "26S proteasome regulatory subunit 8", "gene_name": "Rpt6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P23647-1", "protein_name": "Serine/threonine-protein kinase fused", "gene_name": "fu", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7KLV9-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 11", "gene_name": "Rpn6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P36872-1", "protein_name": "Protein phosphatase PP2A 55 kDa regulatory subunit", "gene_name": "tws", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P48601-1", "protein_name": "26S proteasome regulatory subunit 4", "gene_name": "Rpt2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P08181-1", "protein_name": "Casein kinase II subunit alpha", "gene_name": "CkIIalpha", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P36179-1", "protein_name": "Serine/threonine-protein phosphatase PP2A 65 kDa regulatory subunit", "gene_name": "Pp2A-29B", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P11346-1", "protein_name": "Raf homolog serine/threonine-protein kinase Raf", "gene_name": "Raf", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P15357-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RpS27A", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P18101-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "RpL40", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V407-1", "protein_name": "Axin", "gene_name": "Axn", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3H2-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 14", "gene_name": "Rpn11", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V5C6-1", "protein_name": "Proteasome subunit alpha type-3", "gene_name": "Prosalpha7", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VUJ1-1", "protein_name": "Proteasome subunit beta", "gene_name": "Prosbeta2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VW54-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 2", "gene_name": "Rpn1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XZ61-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Uch-L5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O76324-1", "protein_name": "Discs overgrown protein kinase", "gene_name": "dco", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P08182-1", "protein_name": "Casein kinase II subunit beta", "gene_name": "CkIIbeta", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XYN7-1", "protein_name": "Proteasome subunit beta type-3", "gene_name": "Prosbeta3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XZJ4-1", "protein_name": "Proteasome subunit alpha type-6", "gene_name": "Prosalpha1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O16844-1", "protein_name": "Kinesin-like protein costa", "gene_name": "cos", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P19538-1", "protein_name": "Transcriptional activator cubitus interruptus", "gene_name": "ci", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P25161-1", "protein_name": "Probable 26S proteasome non-ATPase regulatory subunit 3", "gene_name": "Rpn3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O77430-1", "protein_name": "SKP1-related A, isoform A; SKP1-related A, isoform B; SKP1-related A, isoform C; SKP1-related A, isoform D; SKP1-related A, isoform E; SKP1-related A, isoform F; SKP1-related A, isoform G; SKP1-related A, isoform H; SKP1-related A, isoform I", "gene_name": "SkpA", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P12370-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit 1", "gene_name": "Pka-C1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P12881-1", "protein_name": "Proteasome subunit alpha type-1", "gene_name": "Prosalpha6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P18431-2", "protein_name": "Protein kinase shaggy", "gene_name": "sgg", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40301-1", "protein_name": "Proteasome subunit alpha type-2", "gene_name": "Prosalpha2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9Y1A7-1", "protein_name": "Minidiscs, isoform A; Minidiscs, isoform C; Minidiscs, isoform D", "gene_name": "mnd", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P26270-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 7", "gene_name": "Rpn8", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P25867-1", "protein_name": "Ubiquitin-conjugating enzyme E2-17 kDa", "gene_name": "eff", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P0CG69-1", "protein_name": "Polyubiquitin", "gene_name": "Ubi-p63E", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P22769-1", "protein_name": "Proteasome subunit alpha type-7-1", "gene_name": "Prosalpha4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P23696-1", "protein_name": "Serine/threonine-protein phosphatase PP2A", "gene_name": "mts", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40304-1", "protein_name": "Proteasome subunit beta type-1", "gene_name": "Prosbeta6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P54367-1", "protein_name": "Casein kinase I isoform alpha", "gene_name": "CkIalpha", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q24311-1", "protein_name": "Cullin homolog 1", "gene_name": "Cul1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q24324-1", "protein_name": "Dual specificity mitogen-activated protein kinase kinase dSOR1", "gene_name": "Dsor1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3V6-1", "protein_name": "5.6.1.5; Regulatory particle triple-A ATPase 5", "gene_name": "Rpt5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P18824-1", "protein_name": "Armadillo segment polarity protein", "gene_name": "arm", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q8ML92-1", "protein_name": "Protein aveugle", "gene_name": "ave", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VKZ8-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Usp14", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V405-1", "protein_name": "26S proteasome regulatory subunit 6B", "gene_name": "Rpt3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9Y1T2-1", "protein_name": "Adenomatous polyposis coli 2, isoform A; Adenomatous polyposis coli 2, isoform C", "gene_name": "Apc2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V436-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 8", "gene_name": "Rpn12", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W5E1-1", "protein_name": "RING-box protein 1A", "gene_name": "Roc1a", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3Z4-1", "protein_name": "Regulatory particle non-ATPase 5", "gene_name": "Rpn5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3P6-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 1", "gene_name": "Rpn2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P55035-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 4", "gene_name": "Rpn10", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q95083-1", "protein_name": "Proteasome subunit alpha type-5", "gene_name": "Prosalpha5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3G7-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 6", "gene_name": "Rpn7", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VJJ0-1", "protein_name": "Proteasome subunit beta", "gene_name": "Prosbeta4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VM46-1", "protein_name": "Probable 26S proteasome complex subunit sem1", "gene_name": "Sem1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VNA5-1", "protein_name": "Proteasome subunit beta type-4", "gene_name": "Prosbeta7", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O18413", "url": "https://www.uniprot.org/uniprotkb/O18413" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.16326393", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 54 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Processing of the Drosophila hedgehog signaling effector Ci-155 to the repressor Ci-75 is mediated by direct binding to the SCF component Slimb.", "journal": "Current biology : CB", "date": "2006", "authors": "Smelkinson MG, Kalderon D", "reference": { "type": "PubMed", "id": "16386907", "url": "https://pubmed.ncbi.nlm.nih.gov/16386907" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O18413-1", "protein_name": "26S proteasome regulatory subunit 8", "gene_name": "Rpt6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P23647-1", "protein_name": "Serine/threonine-protein kinase fused", "gene_name": "fu", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7KLV9-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 11", "gene_name": "Rpn6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P36872-1", "protein_name": "Protein phosphatase PP2A 55 kDa regulatory subunit", "gene_name": "tws", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P48601-1", "protein_name": "26S proteasome regulatory subunit 4", "gene_name": "Rpt2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P36179-1", "protein_name": "Serine/threonine-protein phosphatase PP2A 65 kDa regulatory subunit", "gene_name": "Pp2A-29B", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P15357-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RpS27A", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P18101-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "RpL40", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V407-1", "protein_name": "Axin", "gene_name": "Axn", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3H2-1", "protein_name": "26S proteasome non-ATPase regulatory 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"gene_name": "Prosalpha1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O16844-1", "protein_name": "Kinesin-like protein costa", "gene_name": "cos", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P19538-1", "protein_name": "Transcriptional activator cubitus interruptus", "gene_name": "ci", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P25161-1", "protein_name": "Probable 26S proteasome non-ATPase regulatory subunit 3", "gene_name": "Rpn3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O77430-1", "protein_name": "SKP1-related A, isoform A; SKP1-related A, isoform B; SKP1-related A, isoform C; SKP1-related A, isoform D; SKP1-related A, isoform E; SKP1-related A, isoform F; SKP1-related A, isoform G; SKP1-related A, isoform H; SKP1-related A, isoform I", "gene_name": "SkpA", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P12370-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit 1", "gene_name": "Pka-C1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P12881-1", "protein_name": "Proteasome subunit alpha type-1", "gene_name": "Prosalpha6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P18431-2", "protein_name": "Protein kinase shaggy", "gene_name": "sgg", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40301-1", "protein_name": "Proteasome subunit alpha type-2", "gene_name": "Prosalpha2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9Y1A7-1", "protein_name": "Minidiscs, isoform A; Minidiscs, isoform C; Minidiscs, isoform D", "gene_name": "mnd", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P26270-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 7", "gene_name": "Rpn8", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P25867-1", "protein_name": "Ubiquitin-conjugating enzyme E2-17 kDa", "gene_name": "eff", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P0CG69-1", "protein_name": "Polyubiquitin", "gene_name": "Ubi-p63E", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P22769-1", "protein_name": "Proteasome subunit alpha type-7-1", "gene_name": "Prosalpha4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P23696-1", "protein_name": "Serine/threonine-protein phosphatase PP2A", "gene_name": "mts", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40304-1", "protein_name": "Proteasome subunit beta type-1", "gene_name": "Prosbeta6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P54367-1", "protein_name": "Casein kinase I isoform alpha", "gene_name": "CkIalpha", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q24311-1", "protein_name": "Cullin homolog 1", "gene_name": "Cul1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3V6-1", "protein_name": "5.6.1.5; Regulatory particle triple-A ATPase 5", "gene_name": "Rpt5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P18824-1", "protein_name": "Armadillo segment polarity protein", "gene_name": "arm", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VKZ8-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Usp14", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V405-1", "protein_name": "26S proteasome regulatory subunit 6B", "gene_name": "Rpt3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9Y1T2-1", "protein_name": "Adenomatous polyposis coli 2, isoform A; Adenomatous polyposis coli 2, isoform C", "gene_name": "Apc2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V436-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 8", "gene_name": "Rpn12", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W5E1-1", "protein_name": "RING-box protein 1A", "gene_name": "Roc1a", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3Z4-1", "protein_name": "Regulatory particle non-ATPase 5", "gene_name": "Rpn5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3P6-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 1", "gene_name": "Rpn2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P55035-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 4", "gene_name": "Rpn10", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q95083-1", "protein_name": "Proteasome subunit alpha type-5", "gene_name": "Prosalpha5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3G7-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 6", "gene_name": "Rpn7", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VJJ0-1", "protein_name": "Proteasome subunit beta", "gene_name": "Prosbeta4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VM46-1", "protein_name": "Probable 26S proteasome complex subunit sem1", "gene_name": "Sem1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VNA5-1", "protein_name": "Proteasome subunit beta type-4", "gene_name": "Prosbeta7", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O18413", "url": "https://www.uniprot.org/uniprotkb/O18413" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.16386907", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 49 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "PER-dependent rhythms in CLK phosphorylation and E-box binding regulate circadian transcription.", "journal": "Genes & development", "date": "2006", "authors": "Yu W, Zheng H, Houl JH, Dauwalder B, Hardin PE", "reference": { "type": "PubMed", "id": "16543224", "url": "https://pubmed.ncbi.nlm.nih.gov/16543224" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O18413-1", "protein_name": "26S proteasome regulatory subunit 8", "gene_name": "Rpt6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O61735-1", "protein_name": "Circadian locomoter output cycles protein kaput", "gene_name": "Clk", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7KLV9-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 11", "gene_name": "Rpn6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P48601-1", "protein_name": "26S proteasome regulatory subunit 4", "gene_name": "Rpt2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P36179-1", "protein_name": "Serine/threonine-protein phosphatase PP2A 65 kDa regulatory subunit", "gene_name": "Pp2A-29B", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3H2-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 14", "gene_name": "Rpn11", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V5C6-1", "protein_name": "Proteasome subunit alpha type-3", "gene_name": "Prosalpha7", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VUJ1-1", "protein_name": "Proteasome subunit beta", "gene_name": "Prosbeta2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VW54-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 2", "gene_name": "Rpn1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XZ61-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Uch-L5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O76324-1", "protein_name": "Discs overgrown protein kinase", "gene_name": "dco", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O61734-1", "protein_name": "Protein cycle", "gene_name": "cyc", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XYN7-1", "protein_name": "Proteasome subunit beta type-3", "gene_name": "Prosbeta3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XZJ4-1", "protein_name": "Proteasome subunit alpha type-6", "gene_name": "Prosalpha1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P25161-1", "protein_name": "Probable 26S proteasome non-ATPase regulatory subunit 3", "gene_name": "Rpn3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P07663-1", "protein_name": "Period circadian protein", "gene_name": "per", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P12881-1", "protein_name": "Proteasome subunit alpha type-1", "gene_name": "Prosalpha6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40301-1", "protein_name": "Proteasome subunit alpha type-2", "gene_name": "Prosalpha2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VMS4-1", "protein_name": "Vrille, isoform A; Vrille, isoform D; Vrille, isoform F", "gene_name": "vri", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9Y1A7-1", "protein_name": "Minidiscs, isoform A; Minidiscs, isoform C; Minidiscs, isoform D", "gene_name": "mnd", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P26270-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 7", "gene_name": "Rpn8", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P22769-1", "protein_name": "Proteasome subunit alpha type-7-1", "gene_name": "Prosalpha4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P23696-1", "protein_name": "Serine/threonine-protein phosphatase PP2A", "gene_name": "mts", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40304-1", "protein_name": "Proteasome subunit beta type-1", "gene_name": "Prosbeta6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3V6-1", "protein_name": "5.6.1.5; Regulatory particle triple-A ATPase 5", "gene_name": "Rpt5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VKZ8-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Usp14", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V405-1", "protein_name": "26S proteasome regulatory subunit 6B", "gene_name": "Rpt3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V436-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 8", "gene_name": "Rpn12", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "A0A6F7R657-1", "protein_name": "Widerborst, isoform H", "gene_name": "wdb", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3Z4-1", "protein_name": "Regulatory particle non-ATPase 5", "gene_name": "Rpn5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3P6-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 1", "gene_name": "Rpn2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P55035-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 4", "gene_name": "Rpn10", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P49021-4", "protein_name": "Protein timeless", "gene_name": "tim", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q95083-1", "protein_name": "Proteasome subunit alpha type-5", "gene_name": "Prosalpha5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3G7-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 6", "gene_name": "Rpn7", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VJJ0-1", "protein_name": "Proteasome subunit beta", "gene_name": "Prosbeta4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VM46-1", "protein_name": "Probable 26S proteasome complex subunit sem1", "gene_name": "Sem1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VNA5-1", "protein_name": "Proteasome subunit beta type-4", "gene_name": "Prosbeta7", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O18413", "url": "https://www.uniprot.org/uniprotkb/O18413" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.16543224", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 38 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": 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[] } ] }, { "title": "Balance between DBT/CKIepsilon kinase and protein phosphatase activities regulate phosphorylation and stability of Drosophila CLOCK protein.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2006", "authors": "Kim EY, Edery I", "reference": { "type": "PubMed", "id": "16603629", "url": "https://pubmed.ncbi.nlm.nih.gov/16603629" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O18413-1", "protein_name": "26S proteasome regulatory subunit 8", "gene_name": "Rpt6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O61735-1", "protein_name": "Circadian locomoter output cycles protein kaput", "gene_name": "Clk", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7KLV9-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 11", "gene_name": "Rpn6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P48601-1", "protein_name": "26S proteasome regulatory subunit 4", "gene_name": "Rpt2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P36179-1", "protein_name": "Serine/threonine-protein phosphatase PP2A 65 kDa regulatory subunit", "gene_name": "Pp2A-29B", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3H2-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 14", "gene_name": "Rpn11", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V5C6-1", "protein_name": "Proteasome subunit alpha type-3", "gene_name": "Prosalpha7", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VUJ1-1", "protein_name": "Proteasome subunit beta", "gene_name": "Prosbeta2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VW54-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 2", "gene_name": "Rpn1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XZ61-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Uch-L5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O76324-1", "protein_name": "Discs overgrown protein kinase", "gene_name": "dco", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O61734-1", "protein_name": "Protein cycle", "gene_name": "cyc", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XYN7-1", "protein_name": "Proteasome subunit beta type-3", "gene_name": "Prosbeta3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XZJ4-1", "protein_name": "Proteasome subunit alpha type-6", "gene_name": "Prosalpha1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P25161-1", "protein_name": "Probable 26S proteasome non-ATPase regulatory subunit 3", "gene_name": "Rpn3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P07663-1", "protein_name": "Period circadian protein", "gene_name": "per", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P12881-1", "protein_name": "Proteasome subunit alpha type-1", "gene_name": "Prosalpha6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40301-1", "protein_name": "Proteasome 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"uniprot_canonical_ac": "Q9V3V6-1", "protein_name": "5.6.1.5; Regulatory particle triple-A ATPase 5", "gene_name": "Rpt5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VKZ8-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Usp14", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V405-1", "protein_name": "26S proteasome regulatory subunit 6B", "gene_name": "Rpt3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V436-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 8", "gene_name": "Rpn12", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "A0A6F7R657-1", "protein_name": "Widerborst, isoform H", "gene_name": "wdb", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3Z4-1", "protein_name": "Regulatory particle non-ATPase 5", "gene_name": "Rpn5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3P6-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 1", "gene_name": "Rpn2", "tax_name": "Fruit 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], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O18413", "url": "https://www.uniprot.org/uniprotkb/O18413" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.16603629", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 38 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { 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"n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "JETLAG resets the Drosophila circadian clock by promoting light-induced degradation of TIMELESS.", "journal": "Science (New York, N.Y.)", "date": "2006", "authors": "Koh K, Zheng X, Sehgal A", "reference": { "type": "PubMed", "id": "16794082", "url": "https://pubmed.ncbi.nlm.nih.gov/16794082" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O18413-1", "protein_name": "26S proteasome regulatory subunit 8", "gene_name": "Rpt6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O61735-1", "protein_name": "Circadian locomoter output cycles protein kaput", "gene_name": "Clk", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7KLV9-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 11", "gene_name": "Rpn6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P48601-1", "protein_name": "26S proteasome regulatory subunit 4", "gene_name": 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"tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P12881-1", "protein_name": "Proteasome subunit alpha type-1", "gene_name": "Prosalpha6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40301-1", "protein_name": "Proteasome subunit alpha type-2", "gene_name": "Prosalpha2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9Y1A7-1", "protein_name": "Minidiscs, isoform A; Minidiscs, isoform C; Minidiscs, isoform D", "gene_name": "mnd", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P26270-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 7", "gene_name": "Rpn8", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P0CG69-1", "protein_name": "Polyubiquitin", "gene_name": "Ubi-p63E", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P22769-1", "protein_name": "Proteasome subunit alpha type-7-1", "gene_name": "Prosalpha4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40304-1", "protein_name": "Proteasome subunit beta type-1", "gene_name": "Prosbeta6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3V6-1", "protein_name": "5.6.1.5; Regulatory particle triple-A ATPase 5", "gene_name": "Rpt5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VKZ8-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Usp14", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V405-1", "protein_name": "26S proteasome regulatory subunit 6B", "gene_name": "Rpt3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V436-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 8", "gene_name": "Rpn12", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3Z4-1", "protein_name": "Regulatory particle non-ATPase 5", "gene_name": "Rpn5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3P6-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 1", "gene_name": "Rpn2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P55035-1", "protein_name": "26S 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[] } ] }, { "title": "Regulation of Hh/Gli signaling by dual ubiquitin pathways.", "journal": "Cell cycle (Georgetown, Tex.)", "date": "2006", "authors": "Jiang J", "reference": { "type": "PubMed", "id": "17102630", "url": "https://pubmed.ncbi.nlm.nih.gov/17102630" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O18413-1", "protein_name": "26S proteasome regulatory subunit 8", "gene_name": "Rpt6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7KLV9-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 11", "gene_name": "Rpn6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P48601-1", "protein_name": "26S proteasome regulatory subunit 4", "gene_name": "Rpt2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P15357-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RpS27A", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9NHX0-1", "protein_name": "RING-box protein 1B", "gene_name": 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"gene_name": "Prosalpha1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P19538-1", "protein_name": "Transcriptional activator cubitus interruptus", "gene_name": "ci", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P25161-1", "protein_name": "Probable 26S proteasome non-ATPase regulatory subunit 3", "gene_name": "Rpn3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P12881-1", "protein_name": "Proteasome subunit alpha type-1", "gene_name": "Prosalpha6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40301-1", "protein_name": "Proteasome subunit alpha type-2", "gene_name": "Prosalpha2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9Y1A7-1", "protein_name": "Minidiscs, isoform A; Minidiscs, isoform C; Minidiscs, isoform D", "gene_name": "mnd", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P26270-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 7", "gene_name": "Rpn8", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P0CG69-1", "protein_name": "Polyubiquitin", "gene_name": "Ubi-p63E", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P22769-1", "protein_name": "Proteasome subunit alpha type-7-1", "gene_name": "Prosalpha4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40304-1", "protein_name": "Proteasome subunit beta type-1", "gene_name": "Prosbeta6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3V6-1", "protein_name": "5.6.1.5; Regulatory particle triple-A ATPase 5", "gene_name": "Rpt5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VKZ8-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Usp14", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V405-1", "protein_name": "26S proteasome regulatory subunit 6B", "gene_name": "Rpt3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V436-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 8", "gene_name": "Rpn12", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q8IP45-1", "protein_name": "Cullin 3, isoform F", "gene_name": "Cul3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3Z4-1", "protein_name": "Regulatory particle non-ATPase 5", "gene_name": "Rpn5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3P6-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 1", "gene_name": "Rpn2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P55035-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 4", "gene_name": "Rpn10", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q95083-1", "protein_name": "Proteasome subunit alpha type-5", "gene_name": "Prosalpha5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3G7-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 6", "gene_name": "Rpn7", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VFP2-1", "protein_name": "Protein roadkill", "gene_name": "rdx", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VJJ0-1", "protein_name": "Proteasome subunit beta", "gene_name": "Prosbeta4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VM46-1", "protein_name": "Probable 26S proteasome complex subunit sem1", "gene_name": "Sem1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VNA5-1", "protein_name": "Proteasome subunit beta type-4", "gene_name": "Prosbeta7", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O18413", "url": "https://www.uniprot.org/uniprotkb/O18413" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.17102630", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 35 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Regulation of Ci-SCFSlimb binding, Ci proteolysis, and hedgehog pathway activity by Ci phosphorylation.", "journal": "Developmental cell", "date": "2007", "authors": "Smelkinson MG, Zhou Q, Kalderon D", "reference": { "type": "PubMed", "id": "17925225", "url": "https://pubmed.ncbi.nlm.nih.gov/17925225" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O18413-1", "protein_name": "26S proteasome regulatory subunit 8", "gene_name": "Rpt6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P23647-1", "protein_name": "Serine/threonine-protein kinase fused", "gene_name": "fu", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7KLV9-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 11", "gene_name": "Rpn6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P36872-1", "protein_name": "Protein phosphatase PP2A 55 kDa regulatory subunit", "gene_name": "tws", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P48601-1", "protein_name": "26S proteasome regulatory subunit 4", "gene_name": "Rpt2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P08181-1", "protein_name": "Casein kinase II subunit alpha", "gene_name": "CkIIalpha", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P36179-1", "protein_name": "Serine/threonine-protein phosphatase PP2A 65 kDa regulatory subunit", "gene_name": "Pp2A-29B", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P11346-1", "protein_name": "Raf homolog serine/threonine-protein kinase Raf", "gene_name": "Raf", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P15357-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RpS27A", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P18101-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "RpL40", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V407-1", "protein_name": "Axin", "gene_name": "Axn", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3H2-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 14", "gene_name": "Rpn11", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V5C6-1", "protein_name": "Proteasome subunit alpha type-3", "gene_name": "Prosalpha7", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VUJ1-1", "protein_name": "Proteasome subunit beta", "gene_name": "Prosbeta2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VW54-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 2", "gene_name": "Rpn1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XZ61-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Uch-L5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O76324-1", "protein_name": "Discs overgrown protein kinase", "gene_name": "dco", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P08182-1", "protein_name": "Casein kinase II subunit beta", "gene_name": "CkIIbeta", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XYN7-1", "protein_name": "Proteasome subunit beta type-3", "gene_name": "Prosbeta3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XZJ4-1", "protein_name": "Proteasome subunit alpha type-6", "gene_name": "Prosalpha1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O16844-1", "protein_name": "Kinesin-like protein costa", "gene_name": "cos", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P19538-1", "protein_name": "Transcriptional activator cubitus interruptus", "gene_name": "ci", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P25161-1", "protein_name": "Probable 26S proteasome non-ATPase regulatory subunit 3", "gene_name": "Rpn3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O77430-1", "protein_name": "SKP1-related A, isoform A; SKP1-related A, isoform B; SKP1-related A, isoform C; SKP1-related A, isoform D; SKP1-related A, isoform E; SKP1-related A, isoform F; SKP1-related A, isoform G; SKP1-related A, isoform H; SKP1-related A, isoform I", "gene_name": "SkpA", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P12370-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit 1", "gene_name": "Pka-C1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P12881-1", "protein_name": "Proteasome subunit alpha type-1", "gene_name": "Prosalpha6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P18431-2", "protein_name": "Protein kinase shaggy", "gene_name": "sgg", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40301-1", "protein_name": "Proteasome subunit alpha type-2", "gene_name": "Prosalpha2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9Y1A7-1", "protein_name": "Minidiscs, isoform A; Minidiscs, isoform C; Minidiscs, isoform D", "gene_name": "mnd", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P26270-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 7", "gene_name": "Rpn8", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P25867-1", "protein_name": "Ubiquitin-conjugating enzyme E2-17 kDa", "gene_name": "eff", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P0CG69-1", "protein_name": "Polyubiquitin", "gene_name": "Ubi-p63E", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P22769-1", "protein_name": "Proteasome subunit alpha type-7-1", "gene_name": "Prosalpha4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P23696-1", "protein_name": "Serine/threonine-protein phosphatase PP2A", "gene_name": "mts", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40304-1", "protein_name": "Proteasome subunit beta type-1", "gene_name": "Prosbeta6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P54367-1", "protein_name": "Casein kinase I isoform alpha", "gene_name": "CkIalpha", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q24311-1", "protein_name": "Cullin homolog 1", "gene_name": "Cul1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q24324-1", "protein_name": "Dual specificity mitogen-activated protein kinase kinase dSOR1", "gene_name": "Dsor1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3V6-1", "protein_name": "5.6.1.5; Regulatory particle triple-A ATPase 5", "gene_name": "Rpt5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P18824-1", "protein_name": "Armadillo segment polarity protein", "gene_name": "arm", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q8ML92-1", "protein_name": "Protein aveugle", "gene_name": "ave", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VKZ8-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Usp14", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V405-1", "protein_name": "26S proteasome regulatory subunit 6B", "gene_name": "Rpt3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9Y1T2-1", "protein_name": "Adenomatous polyposis coli 2, isoform A; Adenomatous polyposis coli 2, isoform C", "gene_name": "Apc2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V436-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 8", "gene_name": "Rpn12", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W5E1-1", "protein_name": "RING-box protein 1A", "gene_name": "Roc1a", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3Z4-1", "protein_name": "Regulatory particle non-ATPase 5", "gene_name": "Rpn5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3P6-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 1", "gene_name": "Rpn2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P55035-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 4", "gene_name": "Rpn10", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P91682-1", "protein_name": "Protein smoothened", "gene_name": "smo", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q95083-1", "protein_name": "Proteasome subunit alpha type-5", "gene_name": "Prosalpha5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3G7-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 6", "gene_name": "Rpn7", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VJJ0-1", "protein_name": "Proteasome subunit beta", "gene_name": "Prosbeta4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VM46-1", "protein_name": "Probable 26S proteasome complex subunit sem1", "gene_name": "Sem1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VNA5-1", "protein_name": "Proteasome subunit beta type-4", "gene_name": "Prosbeta7", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O18413", "url": "https://www.uniprot.org/uniprotkb/O18413" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.17925225", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 55 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of novel genes involved in light-dependent CRY degradation through a genome-wide RNAi screen.", "journal": "Genes & development", "date": "2008", "authors": "Sathyanarayanan S, Zheng X, Kumar S, Chen CH, Chen D, Hay B, Sehgal A", "reference": { "type": "PubMed", "id": "18519643", "url": "https://pubmed.ncbi.nlm.nih.gov/18519643" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O18413-1", "protein_name": "26S proteasome regulatory subunit 8", "gene_name": "Rpt6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7KLV9-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 11", "gene_name": "Rpn6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P48601-1", "protein_name": "26S proteasome regulatory subunit 4", "gene_name": "Rpt2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P15357-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RpS27A", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P18101-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "RpL40", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3H2-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 14", "gene_name": "Rpn11", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V5C6-1", "protein_name": "Proteasome subunit alpha type-3", "gene_name": "Prosalpha7", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VUJ1-1", "protein_name": "Proteasome subunit beta", "gene_name": "Prosbeta2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VW54-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 2", "gene_name": "Rpn1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XZ61-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Uch-L5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XYN7-1", "protein_name": "Proteasome subunit beta type-3", "gene_name": "Prosbeta3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XZJ4-1", "protein_name": "Proteasome subunit alpha type-6", "gene_name": "Prosalpha1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P25161-1", "protein_name": "Probable 26S proteasome non-ATPase regulatory subunit 3", "gene_name": "Rpn3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O77059-1", "protein_name": "Cryptochrome-1", "gene_name": "cry", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P12881-1", "protein_name": "Proteasome subunit alpha type-1", "gene_name": "Prosalpha6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40301-1", "protein_name": "Proteasome subunit alpha type-2", "gene_name": "Prosalpha2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9Y1A7-1", "protein_name": "Minidiscs, isoform A; Minidiscs, isoform C; Minidiscs, isoform D", "gene_name": "mnd", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P26270-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 7", "gene_name": "Rpn8", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P0CG69-1", "protein_name": "Polyubiquitin", "gene_name": "Ubi-p63E", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P22769-1", "protein_name": "Proteasome subunit alpha type-7-1", "gene_name": "Prosalpha4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40304-1", "protein_name": "Proteasome subunit beta type-1", "gene_name": "Prosbeta6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3V6-1", "protein_name": "5.6.1.5; Regulatory particle triple-A ATPase 5", "gene_name": "Rpt5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VKZ8-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Usp14", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V405-1", "protein_name": "26S proteasome regulatory subunit 6B", "gene_name": "Rpt3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V436-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 8", "gene_name": "Rpn12", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3Z4-1", "protein_name": "Regulatory particle non-ATPase 5", "gene_name": "Rpn5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3P6-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 1", "gene_name": "Rpn2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P55035-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 4", "gene_name": "Rpn10", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q95083-1", "protein_name": "Proteasome subunit alpha type-5", "gene_name": "Prosalpha5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3G7-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 6", "gene_name": "Rpn7", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VJJ0-1", "protein_name": "Proteasome subunit beta", "gene_name": "Prosbeta4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VM46-1", "protein_name": "Probable 26S proteasome complex subunit sem1", "gene_name": "Sem1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VNA5-1", "protein_name": "Proteasome subunit beta type-4", "gene_name": "Prosbeta7", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O18413", "url": "https://www.uniprot.org/uniprotkb/O18413" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.18519643", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 33 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The phospho-occupancy of an atypical SLIMB-binding site on PERIOD that is phosphorylated by DOUBLETIME controls the pace of the clock.", "journal": "Genes & development", "date": "2008", "authors": "Chiu JC, Vanselow JT, Kramer A, Edery I", "reference": { "type": "PubMed", "id": "18593878", "url": "https://pubmed.ncbi.nlm.nih.gov/18593878" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O18413-1", "protein_name": "26S proteasome regulatory subunit 8", "gene_name": "Rpt6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O61735-1", "protein_name": "Circadian locomoter output cycles protein kaput", "gene_name": "Clk", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7KLV9-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 11", "gene_name": "Rpn6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P36872-1", "protein_name": "Protein phosphatase PP2A 55 kDa regulatory subunit", "gene_name": "tws", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P48601-1", "protein_name": "26S proteasome regulatory subunit 4", "gene_name": "Rpt2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P08181-1", "protein_name": "Casein kinase II subunit alpha", "gene_name": "CkIIalpha", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P36179-1", "protein_name": "Serine/threonine-protein phosphatase PP2A 65 kDa regulatory subunit", "gene_name": "Pp2A-29B", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P11346-1", "protein_name": "Raf homolog serine/threonine-protein kinase Raf", "gene_name": "Raf", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P15357-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RpS27A", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P18101-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "RpL40", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P92177-3", "protein_name": "14-3-3 protein epsilon", "gene_name": "14-3-3epsilon", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V407-1", "protein_name": "Axin", "gene_name": "Axn", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3H2-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 14", "gene_name": "Rpn11", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V5C6-1", "protein_name": "Proteasome subunit alpha type-3", "gene_name": "Prosalpha7", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VUJ1-1", "protein_name": "Proteasome subunit beta", "gene_name": "Prosbeta2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VW54-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 2", "gene_name": "Rpn1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XZ61-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Uch-L5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O76324-1", "protein_name": "Discs overgrown protein kinase", "gene_name": "dco", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P08182-1", "protein_name": "Casein kinase II subunit beta", "gene_name": "CkIIbeta", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O61734-1", "protein_name": "Protein cycle", "gene_name": "cyc", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XYN7-1", "protein_name": "Proteasome subunit beta type-3", "gene_name": "Prosbeta3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XZJ4-1", "protein_name": "Proteasome subunit alpha type-6", "gene_name": "Prosalpha1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P25161-1", "protein_name": "Probable 26S proteasome non-ATPase regulatory subunit 3", "gene_name": "Rpn3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O77059-1", "protein_name": "Cryptochrome-1", "gene_name": "cry", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P07663-1", "protein_name": "Period circadian protein", "gene_name": "per", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P08646-1", "protein_name": "Ras-like protein 1", "gene_name": "Ras85D", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P12881-1", "protein_name": "Proteasome subunit alpha type-1", "gene_name": "Prosalpha6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P18431-2", "protein_name": "Protein kinase shaggy", "gene_name": "sgg", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40301-1", "protein_name": "Proteasome subunit alpha type-2", "gene_name": "Prosalpha2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9Y1A7-1", "protein_name": "Minidiscs, isoform A; Minidiscs, isoform C; Minidiscs, isoform D", "gene_name": "mnd", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P26270-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 7", "gene_name": "Rpn8", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P0CG69-1", "protein_name": "Polyubiquitin", "gene_name": "Ubi-p63E", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P22769-1", "protein_name": "Proteasome subunit alpha type-7-1", "gene_name": "Prosalpha4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P23696-1", "protein_name": "Serine/threonine-protein phosphatase PP2A", "gene_name": "mts", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40304-1", "protein_name": "Proteasome subunit beta type-1", "gene_name": "Prosbeta6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P54367-1", "protein_name": "Casein kinase I isoform alpha", "gene_name": "CkIalpha", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q24324-1", "protein_name": "Dual specificity mitogen-activated protein kinase kinase dSOR1", "gene_name": "Dsor1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3V6-1", "protein_name": "5.6.1.5; Regulatory particle triple-A ATPase 5", "gene_name": "Rpt5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q8ML92-1", "protein_name": "Protein aveugle", "gene_name": "ave", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VKZ8-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Usp14", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V405-1", "protein_name": "26S proteasome regulatory subunit 6B", "gene_name": "Rpt3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9Y1T2-1", "protein_name": "Adenomatous polyposis coli 2, isoform A; Adenomatous polyposis coli 2, isoform C", "gene_name": "Apc2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V436-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 8", "gene_name": "Rpn12", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "A0A6F7R657-1", "protein_name": "Widerborst, isoform H", "gene_name": "wdb", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3Z4-1", "protein_name": "Regulatory particle non-ATPase 5", "gene_name": "Rpn5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3P6-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 1", "gene_name": "Rpn2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V9J3-1", "protein_name": "Tyrosine-protein kinase Src42A", "gene_name": "Src42A", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P55035-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 4", "gene_name": "Rpn10", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P49021-4", "protein_name": "Protein timeless", "gene_name": "tim", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q95083-1", "protein_name": "Proteasome subunit alpha type-5", "gene_name": "Prosalpha5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3G7-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 6", "gene_name": "Rpn7", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VJJ0-1", "protein_name": "Proteasome subunit beta", "gene_name": "Prosbeta4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VM46-1", "protein_name": "Probable 26S proteasome complex subunit sem1", "gene_name": "Sem1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VNA5-1", "protein_name": "Proteasome subunit beta type-4", "gene_name": "Prosbeta7", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O18413", "url": "https://www.uniprot.org/uniprotkb/O18413" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.18593878", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 54 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", 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U.S.A.", "date": "2012", "authors": "Pathare Ganesh Ramnath, Nagy Istv\u00e1n, Bohn Stefan, Unverdorben Pia, Hubert Agnes, K\u00f6rner Roman, Nickell Stephan, Lasker Keren, Sali Andrej, Tamura Tomohiro, Nishioka Taiki, F\u00f6rster Friedrich, Baumeister Wolfgang, Bracher Andreas", "reference": { "type": "PubMed", "id": "22187461", "url": "https://pubmed.ncbi.nlm.nih.gov/22187461" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O18413-1", "protein_name": "26S proteasome regulatory subunit 8", "gene_name": "Rpt6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7KLV9-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 11", "gene_name": "Rpn6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40301-1", "protein_name": "Proteasome subunit alpha type-2", "gene_name": "Prosalpha2", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O18413", "url": "https://www.uniprot.org/uniprotkb/O18413" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.22187461", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identifying USPs regulating immune signals in Drosophila: USP2 deubiquitinates Imd and promotes its degradation by interacting with the proteasome.", "journal": "Cell Commun. 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}, { "uniprot_canonical_ac": "Q9V405-1", "protein_name": "26S proteasome regulatory subunit 6B", "gene_name": "Rpt3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V436-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 8", "gene_name": "Rpn12", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3Z4-1", "protein_name": "Regulatory particle non-ATPase 5", "gene_name": "Rpn5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3P6-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 1", "gene_name": "Rpn2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P55035-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 4", "gene_name": "Rpn10", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q95083-1", "protein_name": "Proteasome subunit alpha type-5", "gene_name": "Prosalpha5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3G7-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 6", "gene_name": "Rpn7", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VJJ0-1", "protein_name": "Proteasome subunit beta", "gene_name": "Prosbeta4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VM46-1", "protein_name": "Probable 26S proteasome complex subunit sem1", "gene_name": "Sem1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VNA5-1", "protein_name": "Proteasome subunit beta type-4", "gene_name": "Prosbeta7", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O18413", "url": "https://www.uniprot.org/uniprotkb/O18413" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.7705656", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 32 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A gradient of cactus protein degradation establishes dorsoventral polarity in the Drosophila embryo.", "journal": "Developmental biology", "date": "1996", "authors": "Reach M, Galindo RL, Towb P, Allen JL, Karin M, Wasserman SA", "reference": { "type": "PubMed", "id": "8948598", "url": "https://pubmed.ncbi.nlm.nih.gov/8948598" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O18413-1", "protein_name": "26S proteasome 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"gene_name": "Prosalpha4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40304-1", "protein_name": "Proteasome subunit beta type-1", "gene_name": "Prosbeta6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P98149-1", "protein_name": "Dorsal-related immunity factor Dif", "gene_name": "Dif", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3V6-1", "protein_name": "5.6.1.5; Regulatory particle triple-A ATPase 5", "gene_name": "Rpt5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VKZ8-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Usp14", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V405-1", "protein_name": "26S proteasome regulatory subunit 6B", "gene_name": "Rpt3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V436-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 8", "gene_name": "Rpn12", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3Z4-1", "protein_name": "Regulatory particle 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"Probable 26S proteasome complex subunit sem1", "gene_name": "Sem1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VNA5-1", "protein_name": "Proteasome subunit beta type-4", "gene_name": "Prosbeta7", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O18413", "url": "https://www.uniprot.org/uniprotkb/O18413" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.8948598", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 37 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Uch-L5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XYN7-1", "protein_name": "Proteasome subunit beta type-3", "gene_name": "Prosbeta3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XZJ4-1", "protein_name": "Proteasome subunit alpha type-6", "gene_name": "Prosalpha1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P15330-1", "protein_name": "Embryonic polarity protein dorsal", "gene_name": "dl", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P25161-1", "protein_name": "Probable 26S proteasome non-ATPase regulatory subunit 3", "gene_name": "Rpn3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P12881-1", "protein_name": "Proteasome subunit alpha type-1", "gene_name": "Prosalpha6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40301-1", "protein_name": "Proteasome subunit alpha type-2", "gene_name": "Prosalpha2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9Y1A7-1", "protein_name": "Minidiscs, isoform A; Minidiscs, isoform C; Minidiscs, isoform D", "gene_name": "mnd", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P26270-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 7", "gene_name": "Rpn8", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P22769-1", "protein_name": "Proteasome subunit alpha type-7-1", "gene_name": "Prosalpha4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40304-1", "protein_name": "Proteasome subunit beta type-1", "gene_name": "Prosbeta6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P98149-1", "protein_name": "Dorsal-related immunity factor Dif", "gene_name": "Dif", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3V6-1", "protein_name": "5.6.1.5; Regulatory particle triple-A ATPase 5", "gene_name": "Rpt5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VKZ8-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Usp14", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V405-1", "protein_name": "26S proteasome regulatory subunit 6B", "gene_name": "Rpt3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V436-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 8", "gene_name": "Rpn12", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3Z4-1", "protein_name": "Regulatory particle non-ATPase 5", "gene_name": "Rpn5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3P6-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 1", "gene_name": "Rpn2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P55035-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 4", "gene_name": "Rpn10", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q95083-1", "protein_name": "Proteasome subunit alpha type-5", "gene_name": "Prosalpha5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3G7-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 6", "gene_name": "Rpn7", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VJJ0-1", "protein_name": "Proteasome subunit beta", "gene_name": "Prosbeta4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VM46-1", "protein_name": "Probable 26S proteasome complex subunit sem1", "gene_name": "Sem1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VNA5-1", "protein_name": "Proteasome subunit beta type-4", "gene_name": "Prosbeta7", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O18413", "url": "https://www.uniprot.org/uniprotkb/O18413" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.9025065", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 32 } 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"n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Proteolysis that is inhibited by hedgehog targets Cubitus interruptus protein to the nucleus and converts it to a repressor.", "journal": "Cell", "date": "1997", "authors": "Aza-Blanc P, Ramirez-Weber FA, Laget MP, Schwartz C, Kornberg TB", "reference": { "type": "PubMed", "id": "9215627", "url": "https://pubmed.ncbi.nlm.nih.gov/9215627" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O18413-1", "protein_name": "26S proteasome regulatory subunit 8", "gene_name": "Rpt6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P23647-1", "protein_name": "Serine/threonine-protein kinase fused", "gene_name": "fu", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7KLV9-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 11", "gene_name": "Rpn6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P36872-1", "protein_name": "Protein phosphatase PP2A 55 kDa regulatory subunit", "gene_name": "tws", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P48601-1", "protein_name": "26S proteasome regulatory subunit 4", "gene_name": "Rpt2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P36179-1", "protein_name": "Serine/threonine-protein phosphatase PP2A 65 kDa regulatory subunit", "gene_name": "Pp2A-29B", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P15357-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RpS27A", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P18101-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "RpL40", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V407-1", "protein_name": "Axin", "gene_name": "Axn", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3H2-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 14", "gene_name": "Rpn11", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V5C6-1", "protein_name": "Proteasome subunit alpha type-3", "gene_name": "Prosalpha7", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VUJ1-1", "protein_name": "Proteasome subunit beta", "gene_name": "Prosbeta2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VW54-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 2", "gene_name": "Rpn1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XZ61-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Uch-L5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O76324-1", "protein_name": "Discs overgrown protein kinase", "gene_name": "dco", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XYN7-1", "protein_name": "Proteasome subunit beta type-3", "gene_name": "Prosbeta3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XZJ4-1", "protein_name": "Proteasome subunit alpha type-6", "gene_name": "Prosalpha1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O16844-1", "protein_name": "Kinesin-like protein costa", "gene_name": "cos", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P19538-1", "protein_name": "Transcriptional activator cubitus interruptus", "gene_name": "ci", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P25161-1", "protein_name": "Probable 26S proteasome non-ATPase regulatory subunit 3", "gene_name": "Rpn3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O77430-1", "protein_name": "SKP1-related A, isoform A; SKP1-related A, isoform B; SKP1-related A, isoform C; SKP1-related A, isoform D; SKP1-related A, isoform E; SKP1-related A, isoform F; SKP1-related A, isoform G; SKP1-related A, isoform H; SKP1-related A, isoform I", "gene_name": "SkpA", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P12370-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit 1", "gene_name": "Pka-C1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P12881-1", "protein_name": "Proteasome subunit alpha type-1", "gene_name": "Prosalpha6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P18431-2", "protein_name": "Protein kinase shaggy", "gene_name": "sgg", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40301-1", "protein_name": "Proteasome subunit alpha type-2", "gene_name": "Prosalpha2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9Y1A7-1", "protein_name": "Minidiscs, isoform A; Minidiscs, isoform C; Minidiscs, isoform D", "gene_name": "mnd", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P26270-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 7", "gene_name": "Rpn8", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P25867-1", "protein_name": "Ubiquitin-conjugating enzyme E2-17 kDa", "gene_name": "eff", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P0CG69-1", "protein_name": "Polyubiquitin", "gene_name": "Ubi-p63E", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P22769-1", "protein_name": "Proteasome subunit alpha type-7-1", "gene_name": "Prosalpha4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P23696-1", "protein_name": "Serine/threonine-protein phosphatase PP2A", "gene_name": "mts", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40304-1", "protein_name": "Proteasome subunit beta type-1", "gene_name": "Prosbeta6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P54367-1", "protein_name": "Casein kinase I isoform alpha", "gene_name": "CkIalpha", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q24311-1", "protein_name": "Cullin homolog 1", "gene_name": "Cul1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3V6-1", "protein_name": "5.6.1.5; Regulatory particle triple-A ATPase 5", "gene_name": "Rpt5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P18824-1", "protein_name": "Armadillo segment polarity protein", "gene_name": "arm", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VKZ8-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Usp14", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V405-1", "protein_name": "26S proteasome regulatory subunit 6B", "gene_name": "Rpt3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9Y1T2-1", "protein_name": "Adenomatous polyposis coli 2, isoform A; Adenomatous polyposis coli 2, isoform C", "gene_name": "Apc2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V436-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 8", "gene_name": "Rpn12", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W5E1-1", "protein_name": "RING-box protein 1A", "gene_name": "Roc1a", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3Z4-1", "protein_name": "Regulatory particle non-ATPase 5", "gene_name": "Rpn5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3P6-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 1", "gene_name": "Rpn2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P55035-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 4", "gene_name": "Rpn10", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q95083-1", "protein_name": "Proteasome subunit alpha type-5", "gene_name": "Prosalpha5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3G7-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 6", "gene_name": "Rpn7", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VJJ0-1", "protein_name": "Proteasome subunit beta", "gene_name": "Prosbeta4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VM46-1", "protein_name": "Probable 26S proteasome complex subunit sem1", "gene_name": "Sem1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VNA5-1", "protein_name": "Proteasome subunit beta type-4", "gene_name": "Prosbeta7", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O18413", "url": "https://www.uniprot.org/uniprotkb/O18413" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.9215627", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 49 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The DUG gene of Drosophila melanogaster encodes a structural and functional homolog of the S. cerevisiae SUG1 predicted ATPase associated with the 26S proteasome.", "journal": "Gene", "date": "1998", "authors": "Mounkes L C, Fuller M T", "reference": { "type": "PubMed", "id": "9469929", "url": "https://pubmed.ncbi.nlm.nih.gov/9469929" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O18413-1", "protein_name": "26S proteasome regulatory subunit 8", "gene_name": "Rpt6", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O18413", "url": "https://www.uniprot.org/uniprotkb/O18413" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.9469929", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "In vivo regulation of the IkappaB homologue cactus during the immune response of Drosophila.", "journal": "The Journal of biological chemistry", "date": "1998", "authors": "Nicolas E, Reichhart JM, Hoffmann JA, Lemaitre B", "reference": { "type": "PubMed", "id": "9553105", "url": "https://pubmed.ncbi.nlm.nih.gov/9553105" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O18413-1", "protein_name": "26S proteasome regulatory subunit 8", "gene_name": "Rpt6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7KLV9-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 11", "gene_name": "Rpn6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P48601-1", "protein_name": "26S proteasome regulatory subunit 4", "gene_name": "Rpt2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q03017-1", "protein_name": "NF-kappa-B inhibitor cactus", "gene_name": "cact", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3H2-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 14", "gene_name": "Rpn11", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V5C6-1", "protein_name": "Proteasome subunit alpha type-3", "gene_name": "Prosalpha7", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VUJ1-1", "protein_name": "Proteasome subunit beta", "gene_name": "Prosbeta2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VW54-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 2", "gene_name": "Rpn1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XZ61-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Uch-L5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XYN7-1", "protein_name": "Proteasome subunit beta type-3", "gene_name": "Prosbeta3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XZJ4-1", "protein_name": "Proteasome subunit alpha type-6", "gene_name": "Prosalpha1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P15330-1", "protein_name": "Embryonic polarity protein dorsal", "gene_name": "dl", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P25161-1", "protein_name": "Probable 26S proteasome non-ATPase regulatory subunit 3", "gene_name": "Rpn3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P12881-1", "protein_name": "Proteasome subunit alpha type-1", "gene_name": "Prosalpha6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40301-1", "protein_name": "Proteasome subunit alpha type-2", "gene_name": "Prosalpha2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9Y1A7-1", "protein_name": "Minidiscs, isoform A; Minidiscs, isoform C; Minidiscs, isoform D", "gene_name": "mnd", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P26270-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 7", "gene_name": "Rpn8", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P22769-1", "protein_name": "Proteasome subunit alpha type-7-1", "gene_name": "Prosalpha4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P40304-1", "protein_name": "Proteasome subunit beta type-1", "gene_name": "Prosbeta6", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P98149-1", "protein_name": "Dorsal-related immunity factor Dif", "gene_name": "Dif", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3V6-1", "protein_name": "5.6.1.5; Regulatory particle triple-A ATPase 5", "gene_name": "Rpt5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VKZ8-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Usp14", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V405-1", "protein_name": "26S proteasome regulatory subunit 6B", "gene_name": "Rpt3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V436-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 8", "gene_name": "Rpn12", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3Z4-1", "protein_name": "Regulatory particle non-ATPase 5", "gene_name": "Rpn5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3P6-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 1", "gene_name": "Rpn2", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P55035-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 4", "gene_name": "Rpn10", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q95083-1", "protein_name": "Proteasome subunit alpha type-5", "gene_name": "Prosalpha5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V3G7-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 6", "gene_name": "Rpn7", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VJJ0-1", "protein_name": "Proteasome subunit beta", "gene_name": "Prosbeta4", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VM46-1", "protein_name": "Probable 26S proteasome complex subunit sem1", "gene_name": "Sem1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VNA5-1", "protein_name": "Proteasome subunit beta type-4", "gene_name": "Prosbeta7", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O18413", "url": "https://www.uniprot.org/uniprotkb/O18413" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.9553105", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 32 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Cloning and characterization of Pros45, the Drosophila SUG1 proteasome subunit homolog.", "journal": "Mol. Gen. Genet.", "date": "1998", "authors": "Cheng L, Roemer N, Smyth K A, Belote J, Nambu J R, Schwartz L M", "reference": { "type": "PubMed", "id": "9738875", "url": "https://pubmed.ncbi.nlm.nih.gov/9738875" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O18413-1", "protein_name": "26S proteasome regulatory subunit 8", "gene_name": "Rpt6", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O18413", "url": "https://www.uniprot.org/uniprotkb/O18413" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.9738875", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Loss of poly(ADP-ribose) glycohydrolase causes progressive neurodegeneration in Drosophila melanogaster.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2004-01-06", "authors": "Hanai Shuji, Kanai Masayuki, Ohashi Sayaka, Okamoto Keiji, Yamada Mitsunori, Takahashi Hitoshi, Miwa Masanao", "reference": { "type": "PubMed", "id": "14676324", "url": "https://pubmed.ncbi.nlm.nih.gov/14676324" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O46043-1", "protein_name": "Poly(ADP-ribose) glycohydrolase", "gene_name": "Parg", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O46043", "url": "https://www.uniprot.org/uniprotkb/O46043" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.14676324", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { 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Biol. Chem.", "date": "2007", "authors": "Pinnola Aaron, Naumova Natasha, Shah Meera, Tulin Alexei V", "reference": { "type": "PubMed", "id": "17827147", "url": "https://pubmed.ncbi.nlm.nih.gov/17827147" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O46043-1", "protein_name": "Poly(ADP-ribose) glycohydrolase", "gene_name": "Parg", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P84051-1", "protein_name": "Histone H2A", "gene_name": "His2A:CG31618; His2A:CG33808; His2A:CG33814; His2A:CG33817; His2A:CG33820; His2A:CG33823; His2A:CG33826; His2A:CG33829; His2A:CG33832; His2A:CG33835; His2A:CG33838; His2A:CG33841; His2A:CG33844; His2A:CG33847; His2A:CG33850; His2A:CG33862; His2A:CG33865; His2A", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P02255-1", "protein_name": "Histone H1", "gene_name": "His1:CG31617; His1:CG33804; His1:CG33810; His1:CG33813; His1:CG33816; His1:CG33819; His1:CG33822; His1:CG33825; His1:CG33828; His1:CG33831; His1:CG33837; 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "Activator-induced spread of poly(ADP-ribose) polymerase promotes nucleosome loss at Hsp70.", "journal": "Molecular cell", "date": "2012-01-13", "authors": "Petesch Steven J, Lis John T", "reference": { "type": "PubMed", "id": "22178397", "url": "https://pubmed.ncbi.nlm.nih.gov/22178397" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O46043-1", "protein_name": "Poly(ADP-ribose) glycohydrolase", "gene_name": "Parg", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P35875-1", "protein_name": "Poly [ADP-ribose] polymerase 1", "gene_name": "Parp1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P02825-1", "protein_name": "Heat shock 70 kDa protein Ab", "gene_name": "Hsp70Ab", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q960X4-1", "protein_name": "Histone acetyltransferase Tip60", "gene_name": "Tip60", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O46043", "url": "https://www.uniprot.org/uniprotkb/O46043" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.22178397", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Poly(ADP-Ribose) polymerase 1 (PARP-1) regulates ribosomal biogenesis in Drosophila nucleoli.", "journal": "PLoS Genet.", "date": "2012", "authors": "Boamah Ernest K, Kotova Elena, Garabedian Mikael, Jarnik Michael, Tulin Alexei V", "reference": { "type": "PubMed", "id": "22242017", "url": "https://pubmed.ncbi.nlm.nih.gov/22242017" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O46043-1", "protein_name": "Poly(ADP-ribose) glycohydrolase", "gene_name": "Parg", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P35875-1", "protein_name": "Poly [ADP-ribose] polymerase 1", "gene_name": "Parp1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W1V3-1", "protein_name": "rRNA 2'-O-methyltransferase fibrillarin", "gene_name": "Fib", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O46043", "url": "https://www.uniprot.org/uniprotkb/O46043" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.22242017", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 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ADP-ribosylhydrolase 3, lead to a degenerative pediatric stress-induced epileptic ataxia syndrome.", "journal": "Am. J. Hum. Genet.", "date": "2018", "authors": "Ghosh SG, Becker K, Huang H, Dixon-Salazar T, Chai G, Salpietro V, Al-Gazali L, Waisfisz Q, Wang H, Vaux KK, Stanley V, Manole A, Akpulat U, Weiss MM, Efthymiou S, Hanna MG, Minetti C, Striano P, Pisciotta L, De Grandis E, Altmuller J, Nurnberg P, Thiele H, Yis U, Okur TD, Polat AI, Amiri N, Doosti M, Karimani EG, Toosi MB, Haddad G, Karakaya M, Wirth B, van Hagen JM, Wolf NI, Maroofian R, Houlden H, Cirak S, Gleeson JG", "reference": { "type": "PubMed", "id": "30100084", "url": "https://pubmed.ncbi.nlm.nih.gov/30100084" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O46043-1", "protein_name": "Poly(ADP-ribose) glycohydrolase", "gene_name": "Parg", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9NX46-1", "protein_name": "ADP-ribosylhydrolase ARH3", "gene_name": "ADPRS", "tax_name": "Human" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": 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pathway regulates development from stem cell niche to longevity control.", "journal": "Life science alliance", "date": "2022-03", "authors": "Bordet Guillaume, Kotova Elena, Tulin Alexei V", "reference": { "type": "PubMed", "id": "34949666", "url": "https://pubmed.ncbi.nlm.nih.gov/34949666" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O46043-1", "protein_name": "Poly(ADP-ribose) glycohydrolase", "gene_name": "Parg", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O46043", "url": "https://www.uniprot.org/uniprotkb/O46043" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "phosphorylation": [ { "start_pos": 24, "end_pos": 24, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "Phosphoserine", "evidence": [ { "database": "UniProtKB", "id": "O46043", "url": 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"protein_name": "Poly [ADP-ribose] polymerase 1", "gene_name": "Parp1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W1H4-1", "protein_name": "DNA ligase 1", "gene_name": "DNAlig1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9NX46-1", "protein_name": "ADP-ribosylhydrolase ARH3", "gene_name": "ADPRS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02299-1", "protein_name": "Histone H3", "gene_name": "His3:CG31613; His3:CG33803; His3:CG33806; His3:CG33809; His3:CG33812; His3:CG33815; His3:CG33818; His3:CG33821; His3:CG33824; His3:CG33827; His3:CG33830; His3:CG33833; His3:CG33836; His3:CG33839; His3:CG33842; His3:CG33845; His3:CG33848; His3:CG33851; His3:CG33854; His3:CG33857; His3:CG33860; His3:CG33863; His3:CG33866; His3", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VNI3-1", "protein_name": "Histone PARylation factor 1", "gene_name": "Hpf1", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ 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Cell. Biol.", "date": "1998", "authors": "Meyer V, Oliver B, Pauli D", "reference": { "type": "PubMed", "id": "9528755", "url": "https://pubmed.ncbi.nlm.nih.gov/9528755" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O46106-1", "protein_name": "Splicing factor 3A subunit 3", "gene_name": "noi", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O46106", "url": "https://www.uniprot.org/uniprotkb/O46106" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.9528755", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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"count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Transcription factor choice in the Hippo signaling pathway: homothorax and yorkie regulation of the microRNA bantam in the progenitor domain of the Drosophila eye imaginal disc.", "journal": "Genes & development", "date": "2009", "authors": "Peng HW, Slattery M, Mann RS", "reference": { "type": "PubMed", "id": "19762509", "url": "https://pubmed.ncbi.nlm.nih.gov/19762509" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O46339-1", "protein_name": "Homeobox protein homothorax", "gene_name": "hth", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P30052-1", "protein_name": "Protein scalloped", "gene_name": "sd", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P22265-1", "protein_name": "Protein teashirt", "gene_name": "tsh", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q45VV3-1", "protein_name": "Transcriptional coactivator yorkie", "gene_name": "yki", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O46339", "url": "https://www.uniprot.org/uniprotkb/O46339" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.19762509", "abstract": "", "glycosylation": [], 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