[ { "title": "Structural requirements for interaction of peroxisomal targeting signal 2 and its receptor PEX7.", "journal": "The Journal of biological chemistry", "date": "2011", "authors": "Kunze M, Neuberger G, Maurer-Stroh S, Ma J, Eck T, Braverman N, Schmid JA, Eisenhaber F, Berger J", "reference": { "type": "PubMed", "id": "22057399", "url": "https://pubmed.ncbi.nlm.nih.gov/22057399" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q86WA8-1", "protein_name": "Lon protease homolog 2, peroxisomal", "gene_name": "LONP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C024-1", "protein_name": "Peroxisomal coenzyme A diphosphatase NUDT7", "gene_name": "NUDT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14832-1", "protein_name": "Phytanoyl-CoA dioxygenase, peroxisomal", "gene_name": "PHYH", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15228-1", "protein_name": "Dihydroxyacetone phosphate acyltransferase", "gene_name": "GNPAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P39210-1", "protein_name": "Mitochondrial inner membrane protein Mpv17", "gene_name": "MPV17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22307-1", "protein_name": "Sterol carrier protein 2", "gene_name": "SCP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35914-1", "protein_name": "Hydroxymethylglutaryl-CoA lyase, mitochondrial", "gene_name": "HMGCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8MXV4-1", "protein_name": "Acyl-coenzyme A diphosphatase NUDT19", "gene_name": "NUDT19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PIL6-1", "protein_name": "Kv channel-interacting protein 4", "gene_name": "KCNIP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75381-1", "protein_name": "Peroxisomal membrane protein PEX14", "gene_name": "PEX14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13608-1", "protein_name": "Peroxisomal ATPase PEX6", "gene_name": "PEX6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28328-1", "protein_name": "Peroxisome biogenesis factor 2", "gene_name": "PEX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43933-1", "protein_name": "Peroxisomal ATPase PEX1", "gene_name": "PEX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99489-1", "protein_name": "D-aspartate oxidase", "gene_name": "DDO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61077-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D3", "gene_name": "UBE2D3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13011-1", "protein_name": "Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial", "gene_name": "ECH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51668-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D1", "gene_name": "UBE2D1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04040-1", "protein_name": "Catalase", "gene_name": "CAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14735-1", "protein_name": "Insulin-degrading enzyme", "gene_name": "IDE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2Q3-1", "protein_name": "Glutathione S-transferase kappa 1", "gene_name": "GSTK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z412-1", "protein_name": "Peroxisome assembly protein 26", "gene_name": "PEX26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P0Z9-1", "protein_name": "Peroxisomal sarcosine oxidase", "gene_name": "PIPOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99424-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 2", "gene_name": "ACOX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15067-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 1", "gene_name": "ACOX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08426-1", "protein_name": "Peroxisomal bifunctional enzyme", "gene_name": "EHHADH", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHK6-1", "protein_name": "Alpha-methylacyl-CoA racemase", "gene_name": "AMACR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35228-1", "protein_name": "Nitric oxide synthase, inducible", "gene_name": "NOS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FIF0-1", "protein_name": "AN1-type zinc finger protein 6", "gene_name": "ZFAND6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2T9J0-1", "protein_name": "Peroxisomal leader peptide-processing protease", "gene_name": "TYSND1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43155-1", "protein_name": "Carnitine O-acetyltransferase", "gene_name": "CRAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62837-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D2", "gene_name": "UBE2D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51659-1", "protein_name": "Peroxisomal multifunctional enzyme type 2", "gene_name": "HSD17B4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJM8-1", "protein_name": "2-Hydroxyacid oxidase 1", "gene_name": "HAO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKG9-1", "protein_name": "Peroxisomal carnitine O-octanoyltransferase", "gene_name": "CROT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6QHF9-2", "protein_name": "Peroxisomal N(1)-acetyl-spermine/spermidine oxidase", "gene_name": "PAOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21549-1", "protein_name": "Alanine--glyoxylate aminotransferase", "gene_name": "AGXT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92968-1", "protein_name": "Peroxisomal membrane protein PEX13", "gene_name": "PEX13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60683-1", "protein_name": "Peroxisome biogenesis factor 10", "gene_name": "PEX10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00623-1", "protein_name": "Peroxisome assembly protein 12", "gene_name": "PEX12", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00628-1", "protein_name": "Peroxisomal targeting signal 2 receptor", "gene_name": "PEX7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BY49-1", "protein_name": "Peroxisomal trans-2-enoyl-CoA reductase", "gene_name": "PECR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ83-1", "protein_name": "2-hydroxyacyl-CoA lyase 1", "gene_name": "HACL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NYQ3-1", "protein_name": "2-Hydroxyacid oxidase 2", "gene_name": "HAO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93008-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 9X", "gene_name": "USP9X", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14975-1", "protein_name": "Long-chain fatty acid transport protein 2", "gene_name": "SLC27A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14032-1", "protein_name": "Bile acid-CoA:amino acid N-acyltransferase", "gene_name": "BAAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09110-1", "protein_name": "3-ketoacyl-CoA thiolase, peroxisomal", "gene_name": "ACAA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NUI1-1", "protein_name": "Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]", "gene_name": "DECR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTZ2-1", "protein_name": "Dehydrogenase/reductase SDR family member 4", "gene_name": "DHRS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75874-1", "protein_name": "Isocitrate dehydrogenase [NADP] cytoplasmic", "gene_name": "IDH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P34913-1", "protein_name": "Bifunctional epoxide hydrolase 2", "gene_name": "EPHX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00116-1", "protein_name": "Alkyldihydroxyacetonephosphate synthase, peroxisomal", "gene_name": "AGPS", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14734-1", "protein_name": "Acyl-coenzyme A thioesterase 8", "gene_name": "ACOT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49753-1", "protein_name": "Acyl-coenzyme A thioesterase 2, mitochondrial", "gene_name": "ACOT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9L9-1", "protein_name": "Peroxisomal succinyl-coenzyme A thioesterase", "gene_name": "ACOT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14920-1", "protein_name": "D-amino-acid oxidase", "gene_name": "DAO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15254-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 3", "gene_name": "ACOX3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q86WA8", "url": "https://www.uniprot.org/uniprotkb/Q86WA8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 113, "end_pos": 113, "sequence_org": "E", "sequence_mut": "R", "comment": "Impaired binding to cargo proteins containing a PTS2 peroxisomal targeting signal.", "evidence": [ { "database": "UniProtKB", "id": "O00628", "url": "https://www.uniprot.org/uniprotkb/O00628" }, { "database": "PubMed", "id": "25538232", "url": "https://pubmed.ncbi.nlm.nih.gov/25538232" }, { "database": "PubMed", "id": "22057399", "url": "https://pubmed.ncbi.nlm.nih.gov/22057399" } ], "uniprot_canonical_ac": "O00628-1" }, { "start_pos": 200, "end_pos": 200, "sequence_org": "E", "sequence_mut": "R", "comment": "Impaired binding to cargo proteins containing a PTS2 peroxisomal targeting signal.", "evidence": [ { "database": "UniProtKB", "id": "O00628", "url": "https://www.uniprot.org/uniprotkb/O00628" }, { "database": "PubMed", "id": "25538232", "url": "https://pubmed.ncbi.nlm.nih.gov/25538232" }, { "database": "PubMed", "id": "22057399", "url": "https://pubmed.ncbi.nlm.nih.gov/22057399" } ], "uniprot_canonical_ac": "O00628-1" }, { "start_pos": 287, "end_pos": 287, "sequence_org": "E", "sequence_mut": "R", "comment": "Impaired interaction with PEX5, leading to decreased peroxisomal import of proteins containing a PTS2 peroxisomal targeting signal.", "evidence": [ { "database": "UniProtKB", "id": "O00628", "url": "https://www.uniprot.org/uniprotkb/O00628" }, { "database": "PubMed", "id": "25538232", "url": "https://pubmed.ncbi.nlm.nih.gov/25538232" }, { "database": "PubMed", "id": "22057399", "url": "https://pubmed.ncbi.nlm.nih.gov/22057399" } ], "uniprot_canonical_ac": "O00628-1" }, { "start_pos": 10, "end_pos": 10, "sequence_org": "H", "sequence_mut": "E", "comment": "In S3E mutant; Abolished localization to peroxisomes.", "evidence": [ { "database": "UniProtKB", "id": "P09110", "url": 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"sequence_mut": "L", "comment": "Does not affect localization to peroxisomes.", "evidence": [ { "database": "UniProtKB", "id": "P09110", "url": "https://www.uniprot.org/uniprotkb/P09110" }, { "database": "PubMed", "id": "22057399", "url": "https://pubmed.ncbi.nlm.nih.gov/22057399" } ], "uniprot_canonical_ac": "P09110-1" }, { "start_pos": 6, "end_pos": 6, "sequence_org": "V", "sequence_mut": "D", "comment": "Abolished localization to peroxisomes.", "evidence": [ { "database": "UniProtKB", "id": "P09110", "url": "https://www.uniprot.org/uniprotkb/P09110" }, { "database": "PubMed", "id": "22057399", "url": "https://pubmed.ncbi.nlm.nih.gov/22057399" } ], "uniprot_canonical_ac": "P09110-1" }, { "start_pos": 6, "end_pos": 6, "sequence_org": "V", "sequence_mut": "K", "comment": "Does not affect localization to peroxisomes.", "evidence": [ { "database": "UniProtKB", "id": "P09110", "url": "https://www.uniprot.org/uniprotkb/P09110" }, { "database": "PubMed", "id": "22057399", "url": 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"referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q86WA8-1", "protein_name": "Lon protease homolog 2, peroxisomal", "gene_name": "LONP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C024-1", "protein_name": "Peroxisomal coenzyme A diphosphatase NUDT7", "gene_name": "NUDT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2M2R8-1", "protein_name": "Peroxisomal targeting signal 1 receptor", "gene_name": "Pex5", "tax_name": "Rat" }, { "uniprot_canonical_ac": "O14832-1", "protein_name": "Phytanoyl-CoA dioxygenase, peroxisomal", "gene_name": "PHYH", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15228-1", "protein_name": "Dihydroxyacetone phosphate acyltransferase", "gene_name": "GNPAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P39210-1", "protein_name": "Mitochondrial inner membrane protein Mpv17", "gene_name": "MPV17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22307-1", "protein_name": "Sterol carrier protein 2", "gene_name": 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"protein_name": "Ubiquitin-conjugating enzyme E2 D3", "gene_name": "UBE2D3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13011-1", "protein_name": "Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial", "gene_name": "ECH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51668-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D1", "gene_name": "UBE2D1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04040-1", "protein_name": "Catalase", "gene_name": "CAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14735-1", "protein_name": "Insulin-degrading enzyme", "gene_name": "IDE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2Q3-1", "protein_name": "Glutathione S-transferase kappa 1", "gene_name": "GSTK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z412-1", "protein_name": "Peroxisome assembly protein 26", "gene_name": "PEX26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P0Z9-1", "protein_name": "Peroxisomal sarcosine oxidase", "gene_name": "PIPOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99424-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 2", "gene_name": "ACOX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15067-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 1", "gene_name": "ACOX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08426-1", "protein_name": "Peroxisomal bifunctional enzyme", "gene_name": "EHHADH", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHK6-1", "protein_name": "Alpha-methylacyl-CoA racemase", "gene_name": "AMACR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35228-1", "protein_name": "Nitric oxide synthase, inducible", "gene_name": "NOS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FIF0-1", "protein_name": "AN1-type zinc finger protein 6", "gene_name": "ZFAND6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2T9J0-1", "protein_name": "Peroxisomal leader peptide-processing protease", "gene_name": "TYSND1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43155-1", "protein_name": "Carnitine O-acetyltransferase", "gene_name": "CRAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62837-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D2", "gene_name": "UBE2D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51659-1", "protein_name": "Peroxisomal multifunctional enzyme type 2", "gene_name": "HSD17B4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJM8-1", "protein_name": "2-Hydroxyacid oxidase 1", "gene_name": "HAO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKG9-1", "protein_name": "Peroxisomal carnitine O-octanoyltransferase", "gene_name": "CROT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6QHF9-2", "protein_name": "Peroxisomal N(1)-acetyl-spermine/spermidine oxidase", "gene_name": "PAOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21549-1", "protein_name": "Alanine--glyoxylate aminotransferase", "gene_name": "AGXT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92968-1", "protein_name": "Peroxisomal membrane protein PEX13", "gene_name": "PEX13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60683-1", "protein_name": "Peroxisome biogenesis factor 10", "gene_name": "PEX10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00623-1", "protein_name": "Peroxisome assembly protein 12", "gene_name": "PEX12", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00628-1", "protein_name": "Peroxisomal targeting signal 2 receptor", "gene_name": "PEX7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BY49-1", "protein_name": "Peroxisomal trans-2-enoyl-CoA reductase", "gene_name": "PECR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ83-1", "protein_name": "2-hydroxyacyl-CoA lyase 1", "gene_name": "HACL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NYQ3-1", "protein_name": "2-Hydroxyacid oxidase 2", "gene_name": "HAO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93008-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 9X", "gene_name": "USP9X", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14975-1", "protein_name": "Long-chain fatty acid transport protein 2", "gene_name": "SLC27A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14032-1", "protein_name": "Bile acid-CoA:amino acid N-acyltransferase", "gene_name": "BAAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09110-1", "protein_name": "3-ketoacyl-CoA thiolase, peroxisomal", "gene_name": "ACAA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NUI1-1", "protein_name": "Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]", "gene_name": "DECR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTZ2-1", "protein_name": "Dehydrogenase/reductase SDR family member 4", "gene_name": "DHRS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75874-1", "protein_name": "Isocitrate dehydrogenase [NADP] cytoplasmic", "gene_name": "IDH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P34913-1", "protein_name": "Bifunctional epoxide hydrolase 2", "gene_name": "EPHX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50542-1", "protein_name": "Peroxisomal targeting signal 1 receptor", "gene_name": "PEX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00116-1", "protein_name": "Alkyldihydroxyacetonephosphate synthase, peroxisomal", "gene_name": "AGPS", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14734-1", "protein_name": "Acyl-coenzyme A thioesterase 8", "gene_name": "ACOT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49753-1", "protein_name": "Acyl-coenzyme A thioesterase 2, mitochondrial", "gene_name": "ACOT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9L9-1", "protein_name": "Peroxisomal succinyl-coenzyme A thioesterase", "gene_name": "ACOT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14920-1", "protein_name": "D-amino-acid oxidase", "gene_name": "DAO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15254-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 3", "gene_name": "ACOX3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q86WA8", "url": "https://www.uniprot.org/uniprotkb/Q86WA8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 11, "end_pos": 11, "sequence_org": "C", "sequence_mut": "K", "comment": "Does not affect ability to mediate peroxisomal import of proteins.", "evidence": [ { "database": "UniProtKB", "id": "P50542", "url": "https://www.uniprot.org/uniprotkb/P50542" }, { "database": "PubMed", "id": "24118911", "url": "https://pubmed.ncbi.nlm.nih.gov/24118911" }, { "database": "PubMed", "id": "19208625", "url": "https://pubmed.ncbi.nlm.nih.gov/19208625" }, { "database": "PubMed", "id": "22371489", "url": "https://pubmed.ncbi.nlm.nih.gov/22371489" } ], "uniprot_canonical_ac": "P50542-1" } ], "record_id": "pubmed.22371489", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 62 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Pex5p imports folded tetrameric catalase by interaction with Pex13p.", "journal": "Traffic (Copenhagen, Denmark)", "date": "2012", "authors": "Otera H, Fujiki Y", "reference": { "type": "PubMed", "id": "22747494", "url": "https://pubmed.ncbi.nlm.nih.gov/22747494" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q86WA8-1", "protein_name": "Lon protease homolog 2, peroxisomal", "gene_name": "LONP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C024-1", "protein_name": "Peroxisomal coenzyme A diphosphatase NUDT7", "gene_name": "NUDT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14832-1", "protein_name": "Phytanoyl-CoA dioxygenase, peroxisomal", "gene_name": "PHYH", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15228-1", "protein_name": "Dihydroxyacetone phosphate acyltransferase", "gene_name": "GNPAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P39210-1", "protein_name": "Mitochondrial inner membrane protein Mpv17", "gene_name": "MPV17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22307-1", "protein_name": "Sterol carrier protein 2", "gene_name": "SCP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35914-1", "protein_name": "Hydroxymethylglutaryl-CoA lyase, mitochondrial", "gene_name": "HMGCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8MXV4-1", "protein_name": "Acyl-coenzyme A diphosphatase NUDT19", "gene_name": "NUDT19", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75381-1", "protein_name": "Peroxisomal membrane protein PEX14", "gene_name": "PEX14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13608-1", "protein_name": "Peroxisomal ATPase PEX6", "gene_name": "PEX6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28328-1", "protein_name": "Peroxisome biogenesis factor 2", "gene_name": "PEX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43933-1", "protein_name": "Peroxisomal ATPase PEX1", "gene_name": "PEX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99489-1", "protein_name": "D-aspartate oxidase", "gene_name": "DDO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61077-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D3", "gene_name": "UBE2D3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13011-1", "protein_name": "Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial", "gene_name": "ECH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51668-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D1", "gene_name": "UBE2D1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04040-1", "protein_name": "Catalase", "gene_name": "CAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14735-1", "protein_name": "Insulin-degrading enzyme", "gene_name": "IDE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2Q3-1", "protein_name": "Glutathione S-transferase kappa 1", "gene_name": "GSTK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z412-1", "protein_name": "Peroxisome assembly protein 26", "gene_name": "PEX26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P0Z9-1", "protein_name": "Peroxisomal sarcosine oxidase", "gene_name": "PIPOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99424-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 2", "gene_name": "ACOX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15067-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 1", "gene_name": "ACOX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08426-1", "protein_name": "Peroxisomal bifunctional enzyme", "gene_name": "EHHADH", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHK6-1", "protein_name": "Alpha-methylacyl-CoA racemase", "gene_name": "AMACR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35228-1", "protein_name": "Nitric oxide synthase, inducible", "gene_name": "NOS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FIF0-1", "protein_name": "AN1-type zinc finger protein 6", "gene_name": "ZFAND6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2T9J0-1", "protein_name": "Peroxisomal leader peptide-processing protease", "gene_name": "TYSND1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43155-1", "protein_name": "Carnitine O-acetyltransferase", "gene_name": "CRAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62837-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D2", "gene_name": "UBE2D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51659-1", "protein_name": "Peroxisomal multifunctional enzyme type 2", "gene_name": "HSD17B4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJM8-1", "protein_name": "2-Hydroxyacid oxidase 1", "gene_name": "HAO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKG9-1", "protein_name": "Peroxisomal carnitine O-octanoyltransferase", "gene_name": "CROT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6QHF9-2", "protein_name": "Peroxisomal N(1)-acetyl-spermine/spermidine oxidase", "gene_name": "PAOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21549-1", "protein_name": "Alanine--glyoxylate aminotransferase", "gene_name": "AGXT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92968-1", "protein_name": "Peroxisomal membrane protein PEX13", "gene_name": "PEX13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60683-1", "protein_name": "Peroxisome biogenesis factor 10", "gene_name": "PEX10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00623-1", "protein_name": "Peroxisome assembly protein 12", "gene_name": "PEX12", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00628-1", "protein_name": "Peroxisomal targeting signal 2 receptor", "gene_name": "PEX7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BY49-1", "protein_name": "Peroxisomal trans-2-enoyl-CoA reductase", "gene_name": "PECR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ83-1", "protein_name": "2-hydroxyacyl-CoA lyase 1", "gene_name": "HACL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NYQ3-1", "protein_name": "2-Hydroxyacid oxidase 2", "gene_name": "HAO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93008-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 9X", "gene_name": "USP9X", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14975-1", "protein_name": "Long-chain fatty acid transport protein 2", "gene_name": "SLC27A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14032-1", "protein_name": "Bile acid-CoA:amino acid N-acyltransferase", "gene_name": "BAAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09110-1", "protein_name": "3-ketoacyl-CoA thiolase, peroxisomal", "gene_name": "ACAA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NUI1-1", "protein_name": "Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]", "gene_name": "DECR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTZ2-1", "protein_name": "Dehydrogenase/reductase SDR family member 4", "gene_name": "DHRS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75874-1", "protein_name": "Isocitrate dehydrogenase [NADP] cytoplasmic", "gene_name": "IDH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P34913-1", "protein_name": "Bifunctional epoxide hydrolase 2", "gene_name": "EPHX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00116-1", "protein_name": "Alkyldihydroxyacetonephosphate synthase, peroxisomal", "gene_name": "AGPS", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14734-1", "protein_name": "Acyl-coenzyme A thioesterase 8", "gene_name": "ACOT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49753-1", "protein_name": "Acyl-coenzyme A thioesterase 2, mitochondrial", "gene_name": "ACOT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9L9-1", "protein_name": "Peroxisomal succinyl-coenzyme A thioesterase", "gene_name": "ACOT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14920-1", "protein_name": "D-amino-acid oxidase", "gene_name": "DAO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15254-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 3", "gene_name": "ACOX3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q86WA8", "url": "https://www.uniprot.org/uniprotkb/Q86WA8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.22747494", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 60 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Interaction of p53 with the CCT complex promotes protein folding and wild-type p53 activity.", "journal": "Molecular cell", "date": "2013", "authors": "Trinidad AG, Muller PA, Cuellar J, Klejnot M, Nobis M, Valpuesta JM, Vousden KH", "reference": { "type": "PubMed", "id": "23747015", "url": "https://pubmed.ncbi.nlm.nih.gov/23747015" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q86WA8-1", "protein_name": "Lon protease homolog 2, peroxisomal", "gene_name": "LONP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00567-1", "protein_name": "Nucleolar protein 56", "gene_name": "NOP56", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRD1-1", "protein_name": "F-box only protein 6", "gene_name": "FBXO6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5XUX1-3", "protein_name": "F-box/WD repeat-containing protein 9", "gene_name": "FBXW9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKA1-1", "protein_name": "F-box/LRR-repeat protein 5", "gene_name": "FBXL5", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95302-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase FKBP9", "gene_name": "FKBP9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49368-1", "protein_name": "T-complex protein 1 subunit gamma", "gene_name": "CCT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99832-1", "protein_name": "T-complex protein 1 subunit eta", "gene_name": "CCT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50991-1", "protein_name": "T-complex protein 1 subunit delta", "gene_name": "CCT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NYA1-1", "protein_name": "Sphingosine kinase 1", "gene_name": "SPHK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q969H0-1", "protein_name": "F-box/WD repeat-containing protein 7", "gene_name": "FBXW7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61962-1", "protein_name": "DDB1- and CUL4-associated factor 7", "gene_name": "DCAF7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H1H9-1", "protein_name": "Kinesin-like protein KIF13A", "gene_name": "KIF13A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15477-1", "protein_name": "Superkiller complex protein 2", "gene_name": "SKIC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14556-1", "protein_name": "Glyceraldehyde-3-phosphate dehydrogenase, testis-specific", "gene_name": "GAPDHS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04062-1", "protein_name": "Lysosomal acid glucosylceramidase", "gene_name": "GBA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17987-1", "protein_name": "T-complex protein 1 subunit alpha", "gene_name": "TCP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15379-1", "protein_name": "Histone deacetylase 3", "gene_name": "HDAC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2T2-1", "protein_name": "AP-3 complex subunit mu-1", "gene_name": "AP3M1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUR4-1", "protein_name": "Telomerase Cajal body protein 1", "gene_name": "WRAP53", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKT7-1", "protein_name": "F-box/LRR-repeat protein 3", "gene_name": "FBXL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57775-1", "protein_name": "F-box/WD repeat-containing protein 4", "gene_name": "FBXW4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40763-1", "protein_name": "Signal transducer and activator of transcription 3", "gene_name": "STAT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q969U6-1", "protein_name": "F-box/WD repeat-containing protein 5", "gene_name": "FBXW5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6D5-1", "protein_name": "Brefeldin A-inhibited guanine nucleotide-exchange protein 2", "gene_name": "ARFGEF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24864-1", "protein_name": "G1/S-specific cyclin-E1", "gene_name": "CCNE1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51784-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 11", "gene_name": "USP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78371-1", "protein_name": "T-complex protein 1 subunit beta", "gene_name": "CCT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0D6-1", "protein_name": "5'-3' exoribonuclease 2", "gene_name": "XRN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48643-1", "protein_name": "T-complex protein 1 subunit epsilon", "gene_name": "CCT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "O96020-1", "protein_name": "G1/S-specific cyclin-E2", "gene_name": "CCNE2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKT8-1", "protein_name": "F-box/WD repeat-containing protein 2", "gene_name": "FBXW2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50990-1", "protein_name": "T-complex protein 1 subunit theta", "gene_name": "CCT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40227-1", "protein_name": "T-complex protein 1 subunit zeta", "gene_name": "CCT6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92526-1", "protein_name": "Probable T-complex protein 1 subunit zeta-2", "gene_name": "CCT6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5XX13-1", "protein_name": "F-box/WD repeat-containing protein 10", "gene_name": "FBXW10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKT5-1", "protein_name": "F-box only protein 4", "gene_name": "FBXO4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04637-1", "protein_name": "Cellular tumor antigen p53", "gene_name": "TP53", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q86WA8", "url": "https://www.uniprot.org/uniprotkb/Q86WA8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.23747015", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 38 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A cargo-centered perspective on the PEX5 receptor-mediated peroxisomal protein import pathway.", "journal": "The Journal of biological chemistry", "date": "2013", "authors": "Francisco T, Rodrigues TA, Freitas MO, Grou CP, Carvalho AF, Sa-Miranda C, Pinto MP, Azevedo JE", "reference": { "type": "PubMed", "id": "23963456", "url": "https://pubmed.ncbi.nlm.nih.gov/23963456" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q86WA8-1", "protein_name": "Lon protease homolog 2, peroxisomal", "gene_name": "LONP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C024-1", "protein_name": "Peroxisomal coenzyme A diphosphatase NUDT7", "gene_name": "NUDT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14832-1", "protein_name": "Phytanoyl-CoA dioxygenase, peroxisomal", "gene_name": "PHYH", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15228-1", "protein_name": "Dihydroxyacetone phosphate acyltransferase", "gene_name": "GNPAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P39210-1", "protein_name": "Mitochondrial inner membrane protein Mpv17", "gene_name": "MPV17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22307-1", "protein_name": "Sterol carrier protein 2", "gene_name": "SCP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35914-1", "protein_name": "Hydroxymethylglutaryl-CoA lyase, mitochondrial", "gene_name": "HMGCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8MXV4-1", "protein_name": "Acyl-coenzyme A diphosphatase NUDT19", "gene_name": "NUDT19", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75381-1", "protein_name": "Peroxisomal membrane protein PEX14", "gene_name": "PEX14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13608-1", "protein_name": "Peroxisomal ATPase PEX6", "gene_name": "PEX6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28328-1", "protein_name": "Peroxisome biogenesis factor 2", "gene_name": "PEX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43933-1", "protein_name": "Peroxisomal ATPase PEX1", "gene_name": "PEX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99489-1", "protein_name": "D-aspartate oxidase", "gene_name": "DDO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61077-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D3", "gene_name": "UBE2D3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13011-1", "protein_name": "Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial", "gene_name": "ECH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51668-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D1", "gene_name": "UBE2D1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04040-1", "protein_name": "Catalase", "gene_name": "CAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14735-1", "protein_name": "Insulin-degrading enzyme", "gene_name": "IDE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2Q3-1", "protein_name": "Glutathione S-transferase kappa 1", "gene_name": "GSTK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z412-1", "protein_name": "Peroxisome assembly protein 26", "gene_name": "PEX26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P0Z9-1", "protein_name": "Peroxisomal sarcosine oxidase", "gene_name": "PIPOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99424-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 2", "gene_name": "ACOX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15067-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 1", "gene_name": "ACOX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08426-1", "protein_name": "Peroxisomal bifunctional enzyme", "gene_name": "EHHADH", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHK6-1", "protein_name": "Alpha-methylacyl-CoA racemase", "gene_name": "AMACR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35228-1", "protein_name": "Nitric oxide synthase, inducible", "gene_name": "NOS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FIF0-1", "protein_name": "AN1-type zinc finger protein 6", "gene_name": "ZFAND6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2T9J0-1", "protein_name": "Peroxisomal leader peptide-processing protease", "gene_name": "TYSND1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43155-1", "protein_name": "Carnitine O-acetyltransferase", "gene_name": "CRAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62837-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D2", "gene_name": "UBE2D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51659-1", "protein_name": "Peroxisomal multifunctional enzyme type 2", "gene_name": "HSD17B4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJM8-1", "protein_name": "2-Hydroxyacid oxidase 1", "gene_name": "HAO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKG9-1", "protein_name": "Peroxisomal carnitine O-octanoyltransferase", "gene_name": "CROT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6QHF9-2", "protein_name": "Peroxisomal N(1)-acetyl-spermine/spermidine oxidase", "gene_name": "PAOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21549-1", "protein_name": "Alanine--glyoxylate aminotransferase", "gene_name": "AGXT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92968-1", "protein_name": "Peroxisomal membrane protein PEX13", "gene_name": "PEX13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60683-1", "protein_name": "Peroxisome biogenesis factor 10", "gene_name": "PEX10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00623-1", "protein_name": "Peroxisome assembly protein 12", "gene_name": "PEX12", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00628-1", "protein_name": "Peroxisomal targeting signal 2 receptor", "gene_name": "PEX7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BY49-1", "protein_name": "Peroxisomal trans-2-enoyl-CoA reductase", "gene_name": "PECR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ83-1", "protein_name": "2-hydroxyacyl-CoA lyase 1", "gene_name": "HACL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NYQ3-1", "protein_name": "2-Hydroxyacid oxidase 2", "gene_name": "HAO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93008-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 9X", "gene_name": "USP9X", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14975-1", "protein_name": "Long-chain fatty acid transport protein 2", "gene_name": "SLC27A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14032-1", "protein_name": "Bile acid-CoA:amino acid N-acyltransferase", "gene_name": "BAAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09110-1", "protein_name": "3-ketoacyl-CoA thiolase, peroxisomal", "gene_name": "ACAA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NUI1-1", "protein_name": "Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]", "gene_name": "DECR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTZ2-1", "protein_name": "Dehydrogenase/reductase SDR family member 4", "gene_name": "DHRS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75874-1", "protein_name": "Isocitrate dehydrogenase [NADP] cytoplasmic", "gene_name": "IDH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P34913-1", "protein_name": "Bifunctional epoxide hydrolase 2", "gene_name": "EPHX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00116-1", "protein_name": "Alkyldihydroxyacetonephosphate synthase, peroxisomal", "gene_name": "AGPS", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14734-1", "protein_name": "Acyl-coenzyme A thioesterase 8", "gene_name": "ACOT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49753-1", "protein_name": "Acyl-coenzyme A thioesterase 2, mitochondrial", "gene_name": "ACOT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9L9-1", "protein_name": "Peroxisomal succinyl-coenzyme A thioesterase", "gene_name": "ACOT4", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A novel Pex14 protein-interacting site of human Pex5 is critical for matrix protein import into peroxisomes.", "journal": "The Journal of biological chemistry", "date": "2014", "authors": "Neuhaus A, Kooshapur H, Wolf J, Meyer NH, Madl T, Saidowsky J, Hambruch E, Lazam A, Jung M, Sattler M, Schliebs W, Erdmann R", "reference": { "type": "PubMed", "id": "24235149", "url": "https://pubmed.ncbi.nlm.nih.gov/24235149" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q86WA8-1", "protein_name": "Lon protease homolog 2, peroxisomal", "gene_name": "LONP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C024-1", "protein_name": "Peroxisomal coenzyme A diphosphatase NUDT7", "gene_name": "NUDT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14832-1", "protein_name": "Phytanoyl-CoA dioxygenase, peroxisomal", "gene_name": "PHYH", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15228-1", "protein_name": "Dihydroxyacetone phosphate acyltransferase", "gene_name": "GNPAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P39210-1", "protein_name": "Mitochondrial inner membrane protein Mpv17", "gene_name": "MPV17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22307-1", "protein_name": "Sterol carrier protein 2", "gene_name": "SCP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35914-1", "protein_name": "Hydroxymethylglutaryl-CoA lyase, mitochondrial", "gene_name": "HMGCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8MXV4-1", "protein_name": "Acyl-coenzyme A diphosphatase NUDT19", "gene_name": "NUDT19", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75381-1", "protein_name": "Peroxisomal membrane protein PEX14", "gene_name": "PEX14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13608-1", "protein_name": "Peroxisomal ATPase PEX6", "gene_name": "PEX6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28328-1", "protein_name": "Peroxisome biogenesis factor 2", "gene_name": "PEX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43933-1", "protein_name": "Peroxisomal ATPase PEX1", "gene_name": "PEX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99489-1", "protein_name": "D-aspartate oxidase", "gene_name": "DDO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61077-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D3", "gene_name": "UBE2D3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13011-1", "protein_name": "Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial", "gene_name": "ECH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51668-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D1", "gene_name": "UBE2D1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04040-1", "protein_name": "Catalase", "gene_name": "CAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14735-1", "protein_name": "Insulin-degrading enzyme", "gene_name": "IDE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2Q3-1", "protein_name": "Glutathione S-transferase kappa 1", "gene_name": "GSTK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z412-1", "protein_name": "Peroxisome assembly protein 26", "gene_name": "PEX26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P0Z9-1", "protein_name": "Peroxisomal sarcosine oxidase", "gene_name": "PIPOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99424-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 2", "gene_name": "ACOX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15067-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 1", "gene_name": "ACOX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08426-1", "protein_name": "Peroxisomal bifunctional enzyme", "gene_name": "EHHADH", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHK6-1", "protein_name": "Alpha-methylacyl-CoA racemase", "gene_name": "AMACR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35228-1", "protein_name": "Nitric oxide synthase, inducible", "gene_name": "NOS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FIF0-1", "protein_name": "AN1-type zinc finger protein 6", "gene_name": "ZFAND6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2T9J0-1", "protein_name": "Peroxisomal leader peptide-processing protease", "gene_name": "TYSND1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43155-1", "protein_name": "Carnitine O-acetyltransferase", "gene_name": "CRAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62837-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D2", "gene_name": "UBE2D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51659-1", "protein_name": "Peroxisomal multifunctional enzyme type 2", "gene_name": "HSD17B4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJM8-1", "protein_name": "2-Hydroxyacid oxidase 1", "gene_name": "HAO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKG9-1", "protein_name": "Peroxisomal carnitine O-octanoyltransferase", "gene_name": "CROT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6QHF9-2", "protein_name": "Peroxisomal N(1)-acetyl-spermine/spermidine oxidase", "gene_name": "PAOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21549-1", "protein_name": "Alanine--glyoxylate aminotransferase", "gene_name": "AGXT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92968-1", "protein_name": "Peroxisomal membrane protein PEX13", "gene_name": "PEX13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60683-1", "protein_name": "Peroxisome biogenesis factor 10", "gene_name": "PEX10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00623-1", "protein_name": "Peroxisome assembly protein 12", "gene_name": "PEX12", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00628-1", "protein_name": "Peroxisomal targeting signal 2 receptor", "gene_name": "PEX7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BY49-1", "protein_name": "Peroxisomal trans-2-enoyl-CoA reductase", "gene_name": "PECR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ83-1", "protein_name": "2-hydroxyacyl-CoA lyase 1", "gene_name": "HACL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NYQ3-1", "protein_name": "2-Hydroxyacid oxidase 2", "gene_name": "HAO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93008-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 9X", "gene_name": "USP9X", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14975-1", "protein_name": 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"protein_name": "Isocitrate dehydrogenase [NADP] cytoplasmic", "gene_name": "IDH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P34913-1", "protein_name": "Bifunctional epoxide hydrolase 2", "gene_name": "EPHX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50542-1", "protein_name": "Peroxisomal targeting signal 1 receptor", "gene_name": "PEX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00116-1", "protein_name": "Alkyldihydroxyacetonephosphate synthase, peroxisomal", "gene_name": "AGPS", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14734-1", "protein_name": "Acyl-coenzyme A thioesterase 8", "gene_name": "ACOT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49753-1", "protein_name": "Acyl-coenzyme A thioesterase 2, mitochondrial", "gene_name": "ACOT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9L9-1", "protein_name": "Peroxisomal succinyl-coenzyme A thioesterase", "gene_name": "ACOT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14920-1", "protein_name": "D-amino-acid oxidase", "gene_name": "DAO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15254-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 3", "gene_name": "ACOX3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q86WA8", "url": "https://www.uniprot.org/uniprotkb/Q86WA8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 118, "end_pos": 118, "sequence_org": "W", "sequence_mut": "A", "comment": "Strongly reduced interaction with PEX14.", "evidence": [ { "database": "UniProtKB", "id": "P50542", "url": "https://www.uniprot.org/uniprotkb/P50542" }, { "database": "PubMed", "id": "24235149", "url": "https://pubmed.ncbi.nlm.nih.gov/24235149" }, { "database": "PubMed", "id": 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"field": "total", "count": 60 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "AAA peroxins and their recruiter Pex26p modulate the interactions of peroxins involved in peroxisomal protein import.", "journal": "The Journal of biological chemistry", "date": "2014", "authors": "Tamura S, Matsumoto N, Takeba R, Fujiki Y", "reference": { "type": "PubMed", "id": "25016021", "url": "https://pubmed.ncbi.nlm.nih.gov/25016021" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q86WA8-1", "protein_name": "Lon protease homolog 2, peroxisomal", "gene_name": "LONP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C024-1", "protein_name": "Peroxisomal coenzyme A diphosphatase NUDT7", "gene_name": "NUDT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14832-1", "protein_name": "Phytanoyl-CoA dioxygenase, peroxisomal", "gene_name": "PHYH", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15228-1", "protein_name": "Dihydroxyacetone phosphate acyltransferase", "gene_name": "GNPAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P39210-1", "protein_name": "Mitochondrial inner membrane protein Mpv17", "gene_name": "MPV17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22307-1", "protein_name": "Sterol carrier protein 2", "gene_name": "SCP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35914-1", "protein_name": "Hydroxymethylglutaryl-CoA lyase, mitochondrial", "gene_name": "HMGCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8MXV4-1", "protein_name": "Acyl-coenzyme A diphosphatase NUDT19", "gene_name": "NUDT19", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75381-1", "protein_name": "Peroxisomal membrane protein PEX14", "gene_name": "PEX14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13608-1", "protein_name": "Peroxisomal ATPase PEX6", "gene_name": "PEX6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28328-1", "protein_name": "Peroxisome biogenesis factor 2", "gene_name": "PEX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43933-1", "protein_name": "Peroxisomal ATPase PEX1", "gene_name": "PEX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99489-1", "protein_name": "D-aspartate oxidase", "gene_name": "DDO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61077-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D3", "gene_name": "UBE2D3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13011-1", "protein_name": 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"tax_name": "Human" }, { "uniprot_canonical_ac": "Q15067-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 1", "gene_name": "ACOX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08426-1", "protein_name": "Peroxisomal bifunctional enzyme", "gene_name": "EHHADH", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHK6-1", "protein_name": "Alpha-methylacyl-CoA racemase", "gene_name": "AMACR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35228-1", "protein_name": "Nitric oxide synthase, inducible", "gene_name": "NOS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FIF0-1", "protein_name": "AN1-type zinc finger protein 6", "gene_name": "ZFAND6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2T9J0-1", "protein_name": "Peroxisomal leader peptide-processing protease", "gene_name": "TYSND1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43155-1", "protein_name": "Carnitine O-acetyltransferase", "gene_name": "CRAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62837-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D2", "gene_name": "UBE2D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51659-1", "protein_name": "Peroxisomal multifunctional enzyme type 2", "gene_name": "HSD17B4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJM8-1", "protein_name": "2-Hydroxyacid oxidase 1", "gene_name": "HAO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKG9-1", "protein_name": "Peroxisomal carnitine O-octanoyltransferase", "gene_name": "CROT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6QHF9-2", "protein_name": "Peroxisomal N(1)-acetyl-spermine/spermidine oxidase", "gene_name": "PAOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21549-1", "protein_name": "Alanine--glyoxylate aminotransferase", "gene_name": "AGXT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92968-1", "protein_name": "Peroxisomal membrane protein PEX13", "gene_name": "PEX13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60683-1", "protein_name": "Peroxisome biogenesis factor 10", "gene_name": "PEX10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00623-1", "protein_name": "Peroxisome assembly protein 12", "gene_name": "PEX12", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00628-1", "protein_name": "Peroxisomal targeting signal 2 receptor", "gene_name": "PEX7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BY49-1", "protein_name": "Peroxisomal trans-2-enoyl-CoA reductase", "gene_name": "PECR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ83-1", "protein_name": "2-hydroxyacyl-CoA lyase 1", "gene_name": "HACL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NYQ3-1", "protein_name": "2-Hydroxyacid oxidase 2", "gene_name": "HAO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93008-1", "protein_name": 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"protein_name": "Dehydrogenase/reductase SDR family member 4", "gene_name": "DHRS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75874-1", "protein_name": "Isocitrate dehydrogenase [NADP] cytoplasmic", "gene_name": "IDH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P34913-1", "protein_name": "Bifunctional epoxide hydrolase 2", "gene_name": "EPHX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00116-1", "protein_name": "Alkyldihydroxyacetonephosphate synthase, peroxisomal", "gene_name": "AGPS", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14734-1", "protein_name": "Acyl-coenzyme A thioesterase 8", "gene_name": "ACOT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49753-1", "protein_name": "Acyl-coenzyme A thioesterase 2, mitochondrial", "gene_name": "ACOT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9L9-1", "protein_name": "Peroxisomal succinyl-coenzyme A thioesterase", "gene_name": "ACOT4", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The molecular chaperone TRiC/CCT binds to the Trp-Asp 40 (WD40) repeat protein WDR68 and promotes its folding, protein kinase DYRK1A binding, and nuclear accumulation.", "journal": "The Journal of biological chemistry", "date": "2014", "authors": "Miyata Y, Shibata T, Aoshima M, Tsubata T, Nishida E", "reference": { "type": "PubMed", "id": "25342745", "url": "https://pubmed.ncbi.nlm.nih.gov/25342745" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q86WA8-1", "protein_name": "Lon protease homolog 2, peroxisomal", "gene_name": "LONP2", "tax_name": "Human" 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"tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q86WA8", "url": "https://www.uniprot.org/uniprotkb/Q86WA8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.25342745", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 38 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Proteostatic control of telomerase function through TRiC-mediated folding of TCAB1.", "journal": "Cell", "date": "2014", "authors": "Freund A, Zhong FL, Venteicher AS, Meng Z, Veenstra TD, Frydman J, Artandi SE", "reference": { "type": "PubMed", "id": "25467444", "url": "https://pubmed.ncbi.nlm.nih.gov/25467444" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q86WA8-1", "protein_name": "Lon protease homolog 2, peroxisomal", "gene_name": "LONP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00567-1", "protein_name": "Nucleolar protein 56", "gene_name": "NOP56", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRD1-1", "protein_name": "F-box only protein 6", "gene_name": "FBXO6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5XUX1-3", "protein_name": "F-box/WD repeat-containing protein 9", "gene_name": "FBXW9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKA1-1", "protein_name": "F-box/LRR-repeat protein 5", "gene_name": "FBXL5", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95302-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase FKBP9", "gene_name": "FKBP9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49368-1", "protein_name": "T-complex protein 1 subunit gamma", "gene_name": "CCT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99832-1", "protein_name": "T-complex protein 1 subunit eta", "gene_name": "CCT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50991-1", "protein_name": "T-complex protein 1 subunit delta", "gene_name": "CCT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NYA1-1", "protein_name": "Sphingosine kinase 1", "gene_name": "SPHK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q969H0-1", "protein_name": "F-box/WD repeat-containing protein 7", "gene_name": "FBXW7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61962-1", "protein_name": "DDB1- and CUL4-associated factor 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"uniprot_canonical_ac": "P51784-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 11", "gene_name": "USP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78371-1", "protein_name": "T-complex protein 1 subunit beta", "gene_name": "CCT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0D6-1", "protein_name": "5'-3' exoribonuclease 2", "gene_name": "XRN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48643-1", "protein_name": "T-complex protein 1 subunit epsilon", "gene_name": "CCT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "O96020-1", "protein_name": "G1/S-specific cyclin-E2", "gene_name": "CCNE2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKT8-1", "protein_name": "F-box/WD repeat-containing protein 2", "gene_name": "FBXW2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50990-1", "protein_name": "T-complex protein 1 subunit theta", "gene_name": "CCT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40227-1", "protein_name": "T-complex protein 1 subunit zeta", "gene_name": "CCT6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92526-1", "protein_name": "Probable T-complex protein 1 subunit zeta-2", "gene_name": "CCT6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5XX13-1", "protein_name": "F-box/WD repeat-containing protein 10", "gene_name": "FBXW10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKT5-1", "protein_name": "F-box only protein 4", "gene_name": "FBXO4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04637-1", "protein_name": "Cellular tumor antigen p53", "gene_name": "TP53", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q86WA8", "url": "https://www.uniprot.org/uniprotkb/Q86WA8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.25467444", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": 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"Acyl-coenzyme A thioesterase 8", "gene_name": "ACOT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49753-1", "protein_name": "Acyl-coenzyme A thioesterase 2, mitochondrial", "gene_name": "ACOT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9L9-1", "protein_name": "Peroxisomal succinyl-coenzyme A thioesterase", "gene_name": "ACOT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14920-1", "protein_name": "D-amino-acid oxidase", "gene_name": "DAO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15254-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 3", "gene_name": "ACOX3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q86WA8", "url": "https://www.uniprot.org/uniprotkb/Q86WA8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 113, "end_pos": 113, "sequence_org": "E", "sequence_mut": "R", "comment": "Impaired binding to cargo proteins containing a PTS2 peroxisomal targeting signal.", "evidence": [ { "database": "UniProtKB", "id": "O00628", "url": "https://www.uniprot.org/uniprotkb/O00628" }, { "database": "PubMed", "id": "25538232", "url": "https://pubmed.ncbi.nlm.nih.gov/25538232" }, { "database": "PubMed", "id": "22057399", "url": "https://pubmed.ncbi.nlm.nih.gov/22057399" } ], "uniprot_canonical_ac": "O00628-1" }, { "start_pos": 200, "end_pos": 200, "sequence_org": "E", "sequence_mut": "R", "comment": "Impaired binding to cargo proteins containing a PTS2 peroxisomal targeting signal.", "evidence": [ { "database": "UniProtKB", "id": "O00628", "url": "https://www.uniprot.org/uniprotkb/O00628" }, { "database": "PubMed", "id": "25538232", "url": "https://pubmed.ncbi.nlm.nih.gov/25538232" }, { "database": "PubMed", "id": "22057399", "url": "https://pubmed.ncbi.nlm.nih.gov/22057399" } ], "uniprot_canonical_ac": "O00628-1" }, { "start_pos": 287, "end_pos": 287, "sequence_org": "E", "sequence_mut": "R", "comment": "Impaired interaction with PEX5, leading to decreased peroxisomal import of proteins containing a PTS2 peroxisomal targeting signal.", "evidence": [ { "database": "UniProtKB", "id": "O00628", "url": "https://www.uniprot.org/uniprotkb/O00628" }, { "database": "PubMed", "id": "25538232", "url": "https://pubmed.ncbi.nlm.nih.gov/25538232" }, { "database": "PubMed", "id": "22057399", "url": "https://pubmed.ncbi.nlm.nih.gov/22057399" } ], "uniprot_canonical_ac": "O00628-1" } ], "record_id": "pubmed.25538232", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 62 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The peroxisomal protein import machinery displays a preference for monomeric substrates.", "journal": "Open biology", "date": "2015", "authors": "Freitas MO, Francisco T, Rodrigues TA, Lismont C, Domingues P, Pinto MP, Grou CP, Fransen M, Azevedo JE", "reference": { "type": "PubMed", "id": "25854684", "url": "https://pubmed.ncbi.nlm.nih.gov/25854684" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q86WA8-1", "protein_name": "Lon protease homolog 2, peroxisomal", "gene_name": "LONP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C024-1", "protein_name": "Peroxisomal coenzyme A diphosphatase NUDT7", "gene_name": "NUDT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14832-1", "protein_name": "Phytanoyl-CoA dioxygenase, peroxisomal", "gene_name": "PHYH", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15228-1", "protein_name": "Dihydroxyacetone phosphate acyltransferase", "gene_name": "GNPAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P39210-1", "protein_name": "Mitochondrial inner membrane protein Mpv17", "gene_name": "MPV17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22307-1", "protein_name": "Sterol carrier protein 2", "gene_name": "SCP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35914-1", "protein_name": "Hydroxymethylglutaryl-CoA lyase, mitochondrial", "gene_name": "HMGCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8MXV4-1", "protein_name": "Acyl-coenzyme A diphosphatase NUDT19", "gene_name": "NUDT19", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75381-1", "protein_name": "Peroxisomal membrane protein PEX14", "gene_name": "PEX14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13608-1", "protein_name": "Peroxisomal ATPase PEX6", "gene_name": "PEX6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28328-1", "protein_name": "Peroxisome biogenesis factor 2", "gene_name": "PEX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43933-1", "protein_name": "Peroxisomal ATPase PEX1", "gene_name": "PEX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99489-1", "protein_name": "D-aspartate oxidase", "gene_name": "DDO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61077-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D3", "gene_name": "UBE2D3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13011-1", "protein_name": "Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial", "gene_name": "ECH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51668-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D1", "gene_name": "UBE2D1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04040-1", "protein_name": "Catalase", "gene_name": "CAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14735-1", "protein_name": "Insulin-degrading enzyme", "gene_name": "IDE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2Q3-1", "protein_name": "Glutathione S-transferase kappa 1", "gene_name": "GSTK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z412-1", "protein_name": "Peroxisome assembly protein 26", "gene_name": "PEX26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P0Z9-1", "protein_name": "Peroxisomal sarcosine oxidase", "gene_name": "PIPOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99424-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 2", "gene_name": "ACOX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15067-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 1", "gene_name": "ACOX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08426-1", "protein_name": "Peroxisomal bifunctional enzyme", "gene_name": "EHHADH", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHK6-1", "protein_name": "Alpha-methylacyl-CoA racemase", "gene_name": "AMACR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35228-1", "protein_name": "Nitric oxide synthase, inducible", "gene_name": "NOS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FIF0-1", "protein_name": "AN1-type zinc finger protein 6", "gene_name": "ZFAND6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2T9J0-1", "protein_name": "Peroxisomal leader peptide-processing protease", "gene_name": "TYSND1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43155-1", "protein_name": "Carnitine O-acetyltransferase", "gene_name": "CRAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62837-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D2", "gene_name": "UBE2D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51659-1", "protein_name": "Peroxisomal multifunctional enzyme type 2", "gene_name": "HSD17B4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJM8-1", "protein_name": "2-Hydroxyacid oxidase 1", "gene_name": "HAO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKG9-1", "protein_name": "Peroxisomal carnitine O-octanoyltransferase", "gene_name": "CROT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6QHF9-2", "protein_name": "Peroxisomal N(1)-acetyl-spermine/spermidine oxidase", "gene_name": "PAOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21549-1", "protein_name": "Alanine--glyoxylate aminotransferase", "gene_name": "AGXT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92968-1", "protein_name": "Peroxisomal membrane protein PEX13", "gene_name": "PEX13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60683-1", "protein_name": "Peroxisome biogenesis factor 10", "gene_name": "PEX10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00623-1", "protein_name": "Peroxisome assembly protein 12", "gene_name": "PEX12", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00628-1", "protein_name": "Peroxisomal targeting signal 2 receptor", "gene_name": "PEX7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BY49-1", "protein_name": "Peroxisomal trans-2-enoyl-CoA reductase", "gene_name": "PECR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ83-1", "protein_name": "2-hydroxyacyl-CoA lyase 1", "gene_name": "HACL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NYQ3-1", "protein_name": "2-Hydroxyacid oxidase 2", "gene_name": "HAO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93008-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 9X", "gene_name": "USP9X", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14975-1", "protein_name": "Long-chain fatty acid transport protein 2", "gene_name": "SLC27A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14032-1", "protein_name": "Bile acid-CoA:amino acid N-acyltransferase", "gene_name": "BAAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09110-1", "protein_name": "3-ketoacyl-CoA thiolase, peroxisomal", "gene_name": "ACAA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NUI1-1", "protein_name": "Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]", "gene_name": "DECR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTZ2-1", "protein_name": "Dehydrogenase/reductase SDR family member 4", "gene_name": "DHRS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75874-1", "protein_name": "Isocitrate dehydrogenase 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"tax_name": "Human" }, { "uniprot_canonical_ac": "O15254-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 3", "gene_name": "ACOX3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q86WA8", "url": "https://www.uniprot.org/uniprotkb/Q86WA8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.25854684", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 60 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { 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"PRKDC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZS3-1", "protein_name": "Superkiller complex protein 8", "gene_name": "SKIC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35228-1", "protein_name": "Nitric oxide synthase, inducible", "gene_name": "NOS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N2K1-1", "protein_name": "Ubiquitin-conjugating enzyme E2 J2", "gene_name": "UBE2J2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FIF0-1", "protein_name": "AN1-type zinc finger protein 6", "gene_name": "ZFAND6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2T9J0-1", "protein_name": "Peroxisomal leader peptide-processing protease", "gene_name": "TYSND1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P1J9-1", "protein_name": "Parafibromin", "gene_name": "CDC73", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43155-1", "protein_name": "Carnitine O-acetyltransferase", "gene_name": "CRAT", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"tax_name": "Human" }, { "uniprot_canonical_ac": "O60683-1", "protein_name": "Peroxisome biogenesis factor 10", "gene_name": "PEX10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00623-1", "protein_name": "Peroxisome assembly protein 12", "gene_name": "PEX12", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00628-1", "protein_name": "Peroxisomal targeting signal 2 receptor", "gene_name": "PEX7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BY49-1", "protein_name": "Peroxisomal trans-2-enoyl-CoA reductase", "gene_name": "PECR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50876-1", "protein_name": "E3 ubiquitin-protein ligase RNF144A", "gene_name": "RNF144A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49459-1", "protein_name": "Ubiquitin-conjugating enzyme E2 A", "gene_name": "UBE2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ83-1", "protein_name": "2-hydroxyacyl-CoA lyase 1", "gene_name": "HACL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NYQ3-1", "protein_name": "2-Hydroxyacid oxidase 2", "gene_name": "HAO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93008-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 9X", "gene_name": "USP9X", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63146-1", "protein_name": "Ubiquitin-conjugating enzyme E2 B", "gene_name": "UBE2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0AVI4-1", "protein_name": "E3 ubiquitin-protein ligase TM129", "gene_name": "TMEM129", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15819-1", "protein_name": "Ubiquitin-conjugating enzyme E2 variant 2", "gene_name": "UBE2V2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14975-1", "protein_name": "Long-chain fatty acid transport protein 2", "gene_name": "SLC27A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14032-1", "protein_name": "Bile acid-CoA:amino acid N-acyltransferase", "gene_name": "BAAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09110-1", "protein_name": "3-ketoacyl-CoA thiolase, peroxisomal", "gene_name": "ACAA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NUI1-1", "protein_name": "Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]", "gene_name": "DECR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTZ2-1", "protein_name": "Dehydrogenase/reductase SDR family member 4", "gene_name": "DHRS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75874-1", "protein_name": "Isocitrate dehydrogenase [NADP] cytoplasmic", "gene_name": "IDH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "P34913-1", "protein_name": "Bifunctional epoxide hydrolase 2", "gene_name": "EPHX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00116-1", "protein_name": "Alkyldihydroxyacetonephosphate synthase, peroxisomal", "gene_name": "AGPS", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14734-1", "protein_name": "Acyl-coenzyme A thioesterase 8", "gene_name": "ACOT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49753-1", "protein_name": "Acyl-coenzyme A thioesterase 2, mitochondrial", "gene_name": "ACOT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9L9-1", "protein_name": "Peroxisomal succinyl-coenzyme A thioesterase", "gene_name": "ACOT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14920-1", "protein_name": "D-amino-acid oxidase", "gene_name": "DAO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15254-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 3", "gene_name": "ACOX3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q86WA8", "url": "https://www.uniprot.org/uniprotkb/Q86WA8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.26086376", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 102 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Revisiting the intraperoxisomal pathway of mammalian PEX7.", "journal": "Scientific reports", "date": "2015", "authors": "Rodrigues TA, Grou CP, Azevedo JE", "reference": { "type": "PubMed", "id": "26138649", "url": "https://pubmed.ncbi.nlm.nih.gov/26138649" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q86WA8-1", "protein_name": "Lon protease homolog 2, peroxisomal", "gene_name": "LONP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C024-1", "protein_name": "Peroxisomal coenzyme A diphosphatase NUDT7", "gene_name": "NUDT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14832-1", "protein_name": "Phytanoyl-CoA dioxygenase, peroxisomal", "gene_name": "PHYH", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15228-1", "protein_name": "Dihydroxyacetone phosphate acyltransferase", "gene_name": "GNPAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P39210-1", "protein_name": "Mitochondrial inner membrane protein Mpv17", "gene_name": "MPV17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22307-1", "protein_name": "Sterol carrier protein 2", "gene_name": "SCP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35914-1", "protein_name": "Hydroxymethylglutaryl-CoA lyase, mitochondrial", "gene_name": "HMGCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8MXV4-1", "protein_name": "Acyl-coenzyme A diphosphatase NUDT19", "gene_name": "NUDT19", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75381-1", "protein_name": "Peroxisomal membrane protein PEX14", "gene_name": "PEX14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13608-1", "protein_name": "Peroxisomal ATPase PEX6", "gene_name": "PEX6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28328-1", "protein_name": "Peroxisome biogenesis factor 2", "gene_name": "PEX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43933-1", "protein_name": "Peroxisomal ATPase PEX1", "gene_name": "PEX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99489-1", "protein_name": "D-aspartate oxidase", "gene_name": "DDO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61077-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D3", "gene_name": "UBE2D3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13011-1", "protein_name": "Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial", "gene_name": "ECH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51668-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D1", "gene_name": "UBE2D1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04040-1", "protein_name": "Catalase", "gene_name": "CAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14735-1", "protein_name": "Insulin-degrading enzyme", "gene_name": "IDE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2Q3-1", "protein_name": "Glutathione S-transferase kappa 1", "gene_name": "GSTK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z412-1", "protein_name": "Peroxisome assembly protein 26", "gene_name": "PEX26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P0Z9-1", "protein_name": "Peroxisomal sarcosine oxidase", "gene_name": "PIPOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99424-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 2", "gene_name": "ACOX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15067-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 1", "gene_name": "ACOX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08426-1", "protein_name": "Peroxisomal bifunctional enzyme", "gene_name": "EHHADH", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHK6-1", "protein_name": "Alpha-methylacyl-CoA racemase", "gene_name": "AMACR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35228-1", "protein_name": "Nitric oxide synthase, inducible", "gene_name": "NOS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FIF0-1", "protein_name": "AN1-type zinc finger protein 6", "gene_name": "ZFAND6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2T9J0-1", "protein_name": "Peroxisomal leader peptide-processing protease", "gene_name": "TYSND1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43155-1", "protein_name": "Carnitine O-acetyltransferase", "gene_name": "CRAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62837-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D2", "gene_name": "UBE2D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51659-1", "protein_name": "Peroxisomal multifunctional enzyme type 2", "gene_name": "HSD17B4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJM8-1", "protein_name": "2-Hydroxyacid oxidase 1", "gene_name": "HAO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKG9-1", "protein_name": "Peroxisomal carnitine O-octanoyltransferase", "gene_name": "CROT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6QHF9-2", "protein_name": "Peroxisomal N(1)-acetyl-spermine/spermidine oxidase", "gene_name": "PAOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21549-1", "protein_name": "Alanine--glyoxylate aminotransferase", "gene_name": "AGXT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92968-1", "protein_name": "Peroxisomal membrane protein PEX13", "gene_name": "PEX13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60683-1", "protein_name": "Peroxisome biogenesis factor 10", "gene_name": "PEX10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00623-1", "protein_name": "Peroxisome assembly protein 12", "gene_name": "PEX12", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00628-1", "protein_name": "Peroxisomal targeting signal 2 receptor", "gene_name": "PEX7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BY49-1", "protein_name": "Peroxisomal trans-2-enoyl-CoA reductase", "gene_name": "PECR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ83-1", "protein_name": "2-hydroxyacyl-CoA lyase 1", "gene_name": "HACL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NYQ3-1", "protein_name": "2-Hydroxyacid oxidase 2", "gene_name": "HAO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93008-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 9X", "gene_name": "USP9X", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14975-1", "protein_name": "Long-chain fatty acid transport protein 2", "gene_name": "SLC27A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14032-1", "protein_name": "Bile acid-CoA:amino acid N-acyltransferase", "gene_name": "BAAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09110-1", "protein_name": "3-ketoacyl-CoA thiolase, peroxisomal", "gene_name": "ACAA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NUI1-1", "protein_name": "Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]", "gene_name": "DECR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTZ2-1", "protein_name": "Dehydrogenase/reductase SDR family member 4", "gene_name": "DHRS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75874-1", "protein_name": "Isocitrate dehydrogenase [NADP] cytoplasmic", "gene_name": "IDH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P34913-1", "protein_name": "Bifunctional epoxide hydrolase 2", "gene_name": "EPHX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00116-1", "protein_name": "Alkyldihydroxyacetonephosphate synthase, peroxisomal", "gene_name": "AGPS", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14734-1", "protein_name": "Acyl-coenzyme A thioesterase 8", "gene_name": "ACOT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49753-1", "protein_name": "Acyl-coenzyme A thioesterase 2, mitochondrial", "gene_name": "ACOT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9L9-1", "protein_name": "Peroxisomal succinyl-coenzyme A thioesterase", "gene_name": "ACOT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14920-1", "protein_name": "D-amino-acid oxidase", "gene_name": "DAO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15254-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 3", "gene_name": "ACOX3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q86WA8", "url": "https://www.uniprot.org/uniprotkb/Q86WA8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.26138649", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 60 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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"uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62837-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D2", "gene_name": "UBE2D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51659-1", "protein_name": "Peroxisomal multifunctional enzyme type 2", "gene_name": "HSD17B4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJM8-1", "protein_name": "2-Hydroxyacid oxidase 1", "gene_name": "HAO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKG9-1", "protein_name": "Peroxisomal carnitine O-octanoyltransferase", "gene_name": "CROT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6QHF9-2", "protein_name": "Peroxisomal N(1)-acetyl-spermine/spermidine oxidase", "gene_name": "PAOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21549-1", "protein_name": "Alanine--glyoxylate aminotransferase", "gene_name": "AGXT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92968-1", "protein_name": "Peroxisomal membrane protein PEX13", "gene_name": "PEX13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60683-1", "protein_name": "Peroxisome biogenesis factor 10", "gene_name": "PEX10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00623-1", "protein_name": "Peroxisome assembly protein 12", "gene_name": "PEX12", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00628-1", "protein_name": "Peroxisomal targeting signal 2 receptor", "gene_name": "PEX7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BY49-1", "protein_name": "Peroxisomal trans-2-enoyl-CoA reductase", "gene_name": "PECR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ83-1", "protein_name": "2-hydroxyacyl-CoA lyase 1", "gene_name": "HACL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NYQ3-1", "protein_name": "2-Hydroxyacid oxidase 2", "gene_name": "HAO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93008-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 9X", "gene_name": "USP9X", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14975-1", "protein_name": "Long-chain fatty acid transport protein 2", "gene_name": "SLC27A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14032-1", "protein_name": "Bile acid-CoA:amino acid N-acyltransferase", "gene_name": "BAAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09110-1", "protein_name": "3-ketoacyl-CoA thiolase, peroxisomal", "gene_name": "ACAA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NUI1-1", "protein_name": "Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]", "gene_name": "DECR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTZ2-1", "protein_name": "Dehydrogenase/reductase SDR family member 4", "gene_name": "DHRS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75874-1", "protein_name": "Isocitrate dehydrogenase [NADP] cytoplasmic", "gene_name": "IDH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P34913-1", "protein_name": "Bifunctional epoxide hydrolase 2", "gene_name": "EPHX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50542-1", "protein_name": "Peroxisomal targeting signal 1 receptor", "gene_name": "PEX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00116-1", "protein_name": "Alkyldihydroxyacetonephosphate synthase, peroxisomal", "gene_name": "AGPS", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14734-1", "protein_name": "Acyl-coenzyme A thioesterase 8", "gene_name": "ACOT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49753-1", "protein_name": "Acyl-coenzyme A thioesterase 2, mitochondrial", "gene_name": "ACOT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9L9-1", "protein_name": "Peroxisomal succinyl-coenzyme A thioesterase", "gene_name": "ACOT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14920-1", "protein_name": "D-amino-acid oxidase", "gene_name": "DAO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15254-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 3", "gene_name": "ACOX3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q86WA8", "url": "https://www.uniprot.org/uniprotkb/Q86WA8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.26220973", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 61 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { 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"n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "ATM functions at the peroxisome to induce pexophagy in response to ROS.", "journal": "Nature cell biology", "date": "2015", "authors": "Zhang J, Tripathi DN, Jing J, Alexander A, Kim J, Powell RT, Dere R, Tait-Mulder J, Lee JH, Paull TT, Pandita RK, Charaka VK, Pandita TK, Kastan MB, Walker CL", "reference": { "type": "PubMed", "id": "26344566", "url": "https://pubmed.ncbi.nlm.nih.gov/26344566" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q86WA8-1", "protein_name": "Lon protease homolog 2, peroxisomal", "gene_name": "LONP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE4-1", "protein_name": "Selenoprotein S", "gene_name": "SELENOS", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95999-1", "protein_name": "B-cell lymphoma/leukemia 10", "gene_name": "BCL10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68036-1", "protein_name": "Ubiquitin-conjugating enzyme E2 L3", "gene_name": "UBE2L3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C024-1", "protein_name": "Peroxisomal coenzyme A diphosphatase NUDT7", "gene_name": "NUDT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14832-1", "protein_name": "Phytanoyl-CoA dioxygenase, peroxisomal", "gene_name": "PHYH", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15228-1", "protein_name": "Dihydroxyacetone phosphate acyltransferase", "gene_name": "GNPAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P39210-1", "protein_name": "Mitochondrial inner membrane protein Mpv17", "gene_name": "MPV17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22307-1", "protein_name": "Sterol carrier protein 2", "gene_name": "SCP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35914-1", "protein_name": "Hydroxymethylglutaryl-CoA lyase, mitochondrial", "gene_name": "HMGCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14527-1", "protein_name": "DNA-dependent ATPase/E3 ubiquitin-protein ligase HLTF", "gene_name": "HLTF", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8MXV4-1", "protein_name": "Acyl-coenzyme A diphosphatase NUDT19", "gene_name": "NUDT19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NS91-1", "protein_name": "E3 ubiquitin-protein ligase RAD18", "gene_name": "RAD18", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75381-1", "protein_name": "Peroxisomal membrane protein PEX14", "gene_name": "PEX14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13608-1", "protein_name": "Peroxisomal ATPase PEX6", "gene_name": "PEX6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28328-1", "protein_name": "Peroxisome biogenesis factor 2", "gene_name": "PEX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43933-1", "protein_name": "Peroxisomal ATPase PEX1", "gene_name": "PEX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99489-1", "protein_name": "D-aspartate oxidase", "gene_name": "DDO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N8N0-1", "protein_name": "E3 ubiquitin-protein ligase RNF152", "gene_name": "RNF152", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P0P0-1", "protein_name": "E3 ubiquitin-protein ligase RNF181", "gene_name": "RNF181", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N7H5-1", "protein_name": "RNA polymerase II-associated factor 1 homolog", "gene_name": "PAF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PD62-1", "protein_name": "RNA polymerase-associated protein CTR9 homolog", "gene_name": "CTR9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVC0-1", "protein_name": "RNA polymerase-associated protein LEO1", "gene_name": "LEO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92541-1", "protein_name": "RNA polymerase-associated protein RTF1 homolog", "gene_name": "RTF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61077-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D3", "gene_name": "UBE2D3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13011-1", "protein_name": "Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial", "gene_name": "ECH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51668-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D1", "gene_name": "UBE2D1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99814-1", "protein_name": "Endothelial PAS domain-containing protein 1", "gene_name": "EPAS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUN8-1", "protein_name": "Derlin-1", "gene_name": "DERL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04040-1", "protein_name": "Catalase", "gene_name": "CAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14735-1", "protein_name": "Insulin-degrading enzyme", "gene_name": "IDE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2Q3-1", "protein_name": "Glutathione S-transferase kappa 1", "gene_name": "GSTK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z412-1", "protein_name": "Peroxisome assembly protein 26", "gene_name": "PEX26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P0Z9-1", "protein_name": "Peroxisomal sarcosine oxidase", "gene_name": "PIPOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14596-1", "protein_name": "Next to BRCA1 gene 1 protein", "gene_name": "NBR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L523-1", "protein_name": "Ras-related GTP-binding protein A", "gene_name": "RRAGA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04439-1", "protein_name": "HLA class I histocompatibility antigen, A alpha chain", "gene_name": "HLA-A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99424-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 2", "gene_name": "ACOX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55072-1", "protein_name": "Transitional endoplasmic reticulum ATPase", "gene_name": "VCP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15067-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 1", "gene_name": "ACOX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZQ8-1", "protein_name": "Microtubule-associated protein 1 light chain 3 beta", "gene_name": "MAP1LC3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTA9-1", "protein_name": "WW domain-containing adapter protein with coiled-coil", "gene_name": "WAC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VTR2-1", "protein_name": "E3 ubiquitin-protein ligase BRE1A", "gene_name": "RNF20", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75150-1", "protein_name": "E3 ubiquitin-protein ligase BRE1B", "gene_name": "RNF40", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12004-1", "protein_name": "DNA sliding clamp PCNA", "gene_name": "PCNA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08426-1", "protein_name": "Peroxisomal bifunctional enzyme", "gene_name": "EHHADH", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHK6-1", "protein_name": "Alpha-methylacyl-CoA racemase", "gene_name": "AMACR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62807-1", "protein_name": "Histone H2B type 1-C/E/F/G/I", "gene_name": "H2BC10; H2BC4; H2BC6; H2BC7; H2BC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78527-1", "protein_name": "DNA-dependent protein kinase catalytic subunit", "gene_name": "PRKDC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZS3-1", "protein_name": "Superkiller complex protein 8", "gene_name": "SKIC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35228-1", "protein_name": "Nitric oxide synthase, inducible", "gene_name": "NOS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N2K1-1", "protein_name": "Ubiquitin-conjugating enzyme E2 J2", "gene_name": "UBE2J2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FIF0-1", "protein_name": "AN1-type zinc finger protein 6", "gene_name": "ZFAND6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q70CQ3-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 30", "gene_name": "USP30", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2T9J0-1", "protein_name": "Peroxisomal leader peptide-processing protease", "gene_name": "TYSND1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13501-1", "protein_name": "Sequestosome-1", "gene_name": "SQSTM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P1J9-1", "protein_name": "Parafibromin", "gene_name": "CDC73", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43155-1", "protein_name": "Carnitine O-acetyltransferase", "gene_name": "CRAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q149N8-1", "protein_name": "E3 ubiquitin-protein ligase SHPRH", "gene_name": "SHPRH", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61088-1", "protein_name": "Ubiquitin-conjugating enzyme E2 N", "gene_name": "UBE2N", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51965-1", "protein_name": "Ubiquitin-conjugating enzyme E2 E1", "gene_name": "UBE2E1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62837-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D2", "gene_name": "UBE2D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51659-1", "protein_name": "Peroxisomal multifunctional enzyme type 2", "gene_name": "HSD17B4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": 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"Peroxisomal membrane protein PEX13", "gene_name": "PEX13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60683-1", "protein_name": "Peroxisome biogenesis factor 10", "gene_name": "PEX10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00623-1", "protein_name": "Peroxisome assembly protein 12", "gene_name": "PEX12", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00628-1", "protein_name": "Peroxisomal targeting signal 2 receptor", "gene_name": "PEX7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BY49-1", "protein_name": "Peroxisomal trans-2-enoyl-CoA reductase", "gene_name": "PECR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50876-1", "protein_name": "E3 ubiquitin-protein ligase RNF144A", "gene_name": "RNF144A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49459-1", "protein_name": "Ubiquitin-conjugating enzyme E2 A", "gene_name": "UBE2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ83-1", "protein_name": "2-hydroxyacyl-CoA lyase 1", "gene_name": "HACL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NYQ3-1", "protein_name": "2-Hydroxyacid oxidase 2", "gene_name": "HAO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93008-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 9X", "gene_name": "USP9X", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63146-1", "protein_name": "Ubiquitin-conjugating enzyme E2 B", "gene_name": "UBE2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0AVI4-1", "protein_name": "E3 ubiquitin-protein ligase TM129", "gene_name": "TMEM129", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15819-1", "protein_name": "Ubiquitin-conjugating enzyme E2 variant 2", "gene_name": "UBE2V2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14975-1", "protein_name": "Long-chain fatty acid transport protein 2", "gene_name": "SLC27A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14032-1", "protein_name": "Bile acid-CoA:amino acid N-acyltransferase", "gene_name": "BAAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09110-1", "protein_name": "3-ketoacyl-CoA thiolase, peroxisomal", "gene_name": "ACAA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NUI1-1", "protein_name": "Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]", "gene_name": "DECR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTZ2-1", "protein_name": "Dehydrogenase/reductase SDR family member 4", "gene_name": "DHRS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75874-1", "protein_name": "Isocitrate dehydrogenase [NADP] cytoplasmic", "gene_name": "IDH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "P34913-1", "protein_name": "Bifunctional epoxide hydrolase 2", "gene_name": "EPHX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50542-1", "protein_name": "Peroxisomal targeting signal 1 receptor", "gene_name": "PEX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00116-1", "protein_name": "Alkyldihydroxyacetonephosphate synthase, peroxisomal", "gene_name": "AGPS", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14734-1", "protein_name": "Acyl-coenzyme A thioesterase 8", "gene_name": "ACOT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49753-1", "protein_name": "Acyl-coenzyme A thioesterase 2, mitochondrial", "gene_name": "ACOT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9L9-1", "protein_name": "Peroxisomal succinyl-coenzyme A thioesterase", "gene_name": "ACOT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14920-1", "protein_name": "D-amino-acid oxidase", "gene_name": "DAO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15254-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 3", "gene_name": "ACOX3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13315-1", "protein_name": "Serine-protein kinase ATM", "gene_name": "ATM", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q86WA8", "url": "https://www.uniprot.org/uniprotkb/Q86WA8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 141, "end_pos": 141, "sequence_org": "S", "sequence_mut": "A", "comment": "Abolished phosphorylation by ATM, leading to impaired monoubiquitination at K-209.", "evidence": [ { "database": "UniProtKB", "id": "P50542", "url": "https://www.uniprot.org/uniprotkb/P50542" }, { "database": "PubMed", "id": "26344566", "url": "https://pubmed.ncbi.nlm.nih.gov/26344566" } ], "uniprot_canonical_ac": "P50542-1" }, { "start_pos": 141, "end_pos": 141, "sequence_org": "S", "sequence_mut": "E", "comment": "Mimics phosphorylation, leading to increased pexophagy in response to reactive oxygen species (ROS).", "evidence": [ { "database": "UniProtKB", "id": "P50542", "url": "https://www.uniprot.org/uniprotkb/P50542" }, { "database": "PubMed", "id": "26344566", "url": "https://pubmed.ncbi.nlm.nih.gov/26344566" } ], "uniprot_canonical_ac": "P50542-1" }, { "start_pos": 209, "end_pos": 209, "sequence_org": "K", "sequence_mut": "R", "comment": "Abolished interaction with SQSTM1, leading to decreased pexophagy in response to reactive oxygen species (ROS).", "evidence": [ { "database": "UniProtKB", "id": "P50542", "url": "https://www.uniprot.org/uniprotkb/P50542" }, { "database": "PubMed", "id": "26344566", "url": "https://pubmed.ncbi.nlm.nih.gov/26344566" } ], "uniprot_canonical_ac": "P50542-1" }, { "start_pos": 3047, "end_pos": 3047, "sequence_org": "R", "sequence_mut": "Q", "comment": "Abolished interaction with PEX5 and translocation to peroxisomes in response to reactive oxygen species (ROS).", "evidence": [ { "database": "UniProtKB", "id": "Q13315", "url": "https://www.uniprot.org/uniprotkb/Q13315" }, { "database": "PubMed", "id": "26344566", "url": "https://pubmed.ncbi.nlm.nih.gov/26344566" } ], "uniprot_canonical_ac": "Q13315-1" } ], "phosphorylation": [ { "start_pos": 141, "end_pos": 141, "kinase_uniprot_canonical_ac": "Q13315-1", "kinase_gene_name": "ATM", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "P50542", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P50542" }, { "database": "PubMed", "id": "26344566", "url": "https://pubmed.ncbi.nlm.nih.gov/26344566" } ], "site_lbl": "Ser141", "uniprot_canonical_ac": "P50542-1" }, { "start_pos": 141, "end_pos": 141, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "Phosphoserine; by ATM", "evidence": [ { "database": "UniProtKB", "id": "P50542", "url": "https://www.uniprot.org/uniprotkb/P50542" }, { "database": "iPTMnet", "id": "P50542", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P50542" }, { "database": "PubMed", "id": "26344566", "url": "https://pubmed.ncbi.nlm.nih.gov/26344566" }, { "database": "PubMed", "id": "27050462", "url": "https://pubmed.ncbi.nlm.nih.gov/27050462" } ], "site_lbl": "Ser141", "uniprot_canonical_ac": "P50542-1" } ], "record_id": "pubmed.26344566", "abstract": "", "glycosylation": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 109 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "PEX2 is the E3 ubiquitin ligase required for pexophagy during starvation.", "journal": "The Journal of cell biology", "date": "2016", "authors": "Sargent G, van Zutphen T, Shatseva T, Zhang L, Di Giovanni V, Bandsma R, Kim PK", "reference": { "type": "PubMed", "id": "27597759", "url": "https://pubmed.ncbi.nlm.nih.gov/27597759" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q86WA8-1", "protein_name": "Lon protease homolog 2, peroxisomal", "gene_name": "LONP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE4-1", "protein_name": "Selenoprotein S", "gene_name": "SELENOS", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95999-1", "protein_name": "B-cell lymphoma/leukemia 10", "gene_name": "BCL10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68036-1", "protein_name": "Ubiquitin-conjugating enzyme E2 L3", "gene_name": "UBE2L3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C024-1", "protein_name": "Peroxisomal coenzyme A diphosphatase NUDT7", "gene_name": "NUDT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14832-1", "protein_name": "Phytanoyl-CoA dioxygenase, peroxisomal", "gene_name": "PHYH", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15228-1", "protein_name": "Dihydroxyacetone phosphate acyltransferase", "gene_name": "GNPAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P39210-1", "protein_name": "Mitochondrial inner membrane protein Mpv17", "gene_name": "MPV17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22307-1", "protein_name": "Sterol carrier protein 2", "gene_name": "SCP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35914-1", "protein_name": "Hydroxymethylglutaryl-CoA lyase, mitochondrial", "gene_name": "HMGCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14527-1", "protein_name": "DNA-dependent ATPase/E3 ubiquitin-protein ligase HLTF", "gene_name": "HLTF", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8MXV4-1", "protein_name": "Acyl-coenzyme A 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"tax_name": "Human" }, { "uniprot_canonical_ac": "P51668-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D1", "gene_name": "UBE2D1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUN8-1", "protein_name": "Derlin-1", "gene_name": "DERL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04040-1", "protein_name": "Catalase", "gene_name": "CAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14735-1", "protein_name": "Insulin-degrading enzyme", "gene_name": "IDE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2Q3-1", "protein_name": "Glutathione S-transferase kappa 1", "gene_name": "GSTK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z412-1", "protein_name": "Peroxisome assembly protein 26", "gene_name": "PEX26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P0Z9-1", "protein_name": "Peroxisomal sarcosine oxidase", "gene_name": "PIPOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L523-1", "protein_name": "Ras-related GTP-binding protein A", 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"uniprot_canonical_ac": "P61088-1", "protein_name": "Ubiquitin-conjugating enzyme E2 N", "gene_name": "UBE2N", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51965-1", "protein_name": "Ubiquitin-conjugating enzyme E2 E1", "gene_name": "UBE2E1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62837-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D2", "gene_name": "UBE2D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51659-1", "protein_name": "Peroxisomal multifunctional enzyme type 2", "gene_name": "HSD17B4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 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"tax_name": "Human" }, { "uniprot_canonical_ac": "O00628-1", "protein_name": "Peroxisomal targeting signal 2 receptor", "gene_name": "PEX7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BY49-1", "protein_name": "Peroxisomal trans-2-enoyl-CoA reductase", "gene_name": "PECR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50876-1", "protein_name": "E3 ubiquitin-protein ligase RNF144A", "gene_name": "RNF144A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49459-1", "protein_name": "Ubiquitin-conjugating enzyme E2 A", "gene_name": "UBE2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ83-1", "protein_name": "2-hydroxyacyl-CoA lyase 1", "gene_name": "HACL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NYQ3-1", "protein_name": "2-Hydroxyacid oxidase 2", "gene_name": "HAO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93008-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 9X", "gene_name": "USP9X", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63146-1", "protein_name": "Ubiquitin-conjugating enzyme E2 B", "gene_name": "UBE2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0AVI4-1", "protein_name": "E3 ubiquitin-protein ligase TM129", "gene_name": "TMEM129", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15819-1", "protein_name": "Ubiquitin-conjugating enzyme E2 variant 2", "gene_name": "UBE2V2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14975-1", "protein_name": "Long-chain fatty acid transport protein 2", "gene_name": "SLC27A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14032-1", "protein_name": "Bile acid-CoA:amino acid N-acyltransferase", "gene_name": "BAAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09110-1", "protein_name": "3-ketoacyl-CoA thiolase, peroxisomal", "gene_name": "ACAA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NUI1-1", "protein_name": "Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]", "gene_name": "DECR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTZ2-1", "protein_name": "Dehydrogenase/reductase SDR family member 4", "gene_name": "DHRS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75874-1", "protein_name": "Isocitrate dehydrogenase [NADP] cytoplasmic", "gene_name": "IDH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": 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"ACOT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9L9-1", "protein_name": "Peroxisomal succinyl-coenzyme A thioesterase", "gene_name": "ACOT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14920-1", "protein_name": "D-amino-acid oxidase", "gene_name": "DAO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28288-1", "protein_name": "ATP-binding cassette sub-family D member 3", "gene_name": "ABCD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15254-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 3", "gene_name": "ACOX3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q86WA8", "url": "https://www.uniprot.org/uniprotkb/Q86WA8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.27597759", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 104 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The peroxisomal AAA ATPase complex prevents pexophagy and development of peroxisome biogenesis disorders.", "journal": "Autophagy", "date": "2017", "authors": "Law KB, Bronte-Tinkew D, Di Pietro E, Snowden A, Jones RO, Moser A, Brumell JH, Braverman N, Kim PK", "reference": { "type": "PubMed", "id": "28521612", "url": "https://pubmed.ncbi.nlm.nih.gov/28521612" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q86WA8-1", "protein_name": "Lon protease homolog 2, peroxisomal", "gene_name": "LONP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C024-1", "protein_name": "Peroxisomal coenzyme A diphosphatase NUDT7", "gene_name": "NUDT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14832-1", "protein_name": "Phytanoyl-CoA dioxygenase, peroxisomal", "gene_name": "PHYH", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15228-1", "protein_name": "Dihydroxyacetone phosphate acyltransferase", "gene_name": "GNPAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P39210-1", "protein_name": "Mitochondrial inner membrane protein Mpv17", "gene_name": "MPV17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22307-1", "protein_name": "Sterol carrier protein 2", "gene_name": "SCP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35914-1", "protein_name": "Hydroxymethylglutaryl-CoA lyase, mitochondrial", "gene_name": "HMGCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8MXV4-1", "protein_name": "Acyl-coenzyme A diphosphatase NUDT19", "gene_name": "NUDT19", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75381-1", "protein_name": "Peroxisomal membrane protein PEX14", "gene_name": "PEX14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13608-1", "protein_name": "Peroxisomal ATPase PEX6", "gene_name": "PEX6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28328-1", "protein_name": "Peroxisome biogenesis factor 2", "gene_name": "PEX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43933-1", "protein_name": "Peroxisomal ATPase PEX1", "gene_name": "PEX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99489-1", "protein_name": "D-aspartate oxidase", "gene_name": "DDO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61077-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D3", "gene_name": "UBE2D3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13011-1", "protein_name": "Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial", "gene_name": "ECH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51668-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D1", "gene_name": "UBE2D1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04040-1", "protein_name": "Catalase", "gene_name": "CAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14735-1", "protein_name": "Insulin-degrading enzyme", "gene_name": "IDE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2Q3-1", "protein_name": "Glutathione S-transferase kappa 1", "gene_name": "GSTK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z412-1", "protein_name": "Peroxisome assembly protein 26", "gene_name": "PEX26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P0Z9-1", "protein_name": "Peroxisomal sarcosine oxidase", "gene_name": "PIPOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99424-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 2", "gene_name": "ACOX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15067-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 1", "gene_name": "ACOX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08426-1", "protein_name": "Peroxisomal bifunctional enzyme", "gene_name": "EHHADH", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHK6-1", "protein_name": "Alpha-methylacyl-CoA racemase", "gene_name": "AMACR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35228-1", "protein_name": "Nitric oxide synthase, inducible", "gene_name": "NOS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FIF0-1", "protein_name": "AN1-type zinc finger protein 6", "gene_name": "ZFAND6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2T9J0-1", "protein_name": "Peroxisomal leader peptide-processing protease", "gene_name": "TYSND1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43155-1", "protein_name": "Carnitine O-acetyltransferase", "gene_name": "CRAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62837-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D2", "gene_name": "UBE2D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51659-1", "protein_name": "Peroxisomal multifunctional enzyme type 2", "gene_name": "HSD17B4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJM8-1", "protein_name": "2-Hydroxyacid oxidase 1", "gene_name": "HAO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKG9-1", "protein_name": "Peroxisomal carnitine O-octanoyltransferase", "gene_name": "CROT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6QHF9-2", "protein_name": "Peroxisomal N(1)-acetyl-spermine/spermidine oxidase", "gene_name": "PAOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21549-1", "protein_name": "Alanine--glyoxylate aminotransferase", "gene_name": "AGXT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92968-1", "protein_name": "Peroxisomal membrane protein PEX13", "gene_name": "PEX13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60683-1", "protein_name": "Peroxisome biogenesis factor 10", "gene_name": "PEX10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00623-1", "protein_name": "Peroxisome assembly protein 12", "gene_name": "PEX12", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00628-1", "protein_name": "Peroxisomal targeting signal 2 receptor", "gene_name": "PEX7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BY49-1", "protein_name": "Peroxisomal trans-2-enoyl-CoA reductase", "gene_name": "PECR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ83-1", "protein_name": "2-hydroxyacyl-CoA lyase 1", "gene_name": "HACL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NYQ3-1", "protein_name": "2-Hydroxyacid oxidase 2", "gene_name": "HAO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93008-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 9X", "gene_name": "USP9X", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14975-1", "protein_name": "Long-chain fatty acid transport protein 2", "gene_name": "SLC27A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14032-1", "protein_name": "Bile acid-CoA:amino acid N-acyltransferase", "gene_name": "BAAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09110-1", "protein_name": "3-ketoacyl-CoA thiolase, peroxisomal", "gene_name": "ACAA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NUI1-1", "protein_name": "Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]", "gene_name": "DECR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTZ2-1", "protein_name": "Dehydrogenase/reductase SDR family member 4", "gene_name": "DHRS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75874-1", "protein_name": "Isocitrate dehydrogenase [NADP] cytoplasmic", "gene_name": "IDH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P34913-1", "protein_name": "Bifunctional epoxide hydrolase 2", "gene_name": "EPHX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00116-1", "protein_name": "Alkyldihydroxyacetonephosphate synthase, peroxisomal", "gene_name": "AGPS", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14734-1", "protein_name": "Acyl-coenzyme A thioesterase 8", "gene_name": "ACOT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49753-1", "protein_name": "Acyl-coenzyme A thioesterase 2, mitochondrial", "gene_name": "ACOT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9L9-1", "protein_name": "Peroxisomal succinyl-coenzyme A thioesterase", "gene_name": "ACOT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14920-1", "protein_name": "D-amino-acid oxidase", "gene_name": "DAO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15254-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 3", "gene_name": "ACOX3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q86WA8", "url": "https://www.uniprot.org/uniprotkb/Q86WA8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.28521612", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 60 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structure and Function of p97 and Pex1/6 Type II AAA+ Complexes.", "journal": "Frontiers in molecular biosciences", "date": "2017", "authors": "Saffert P, Enenkel C, Wendler P", "reference": { "type": "PubMed", "id": "28611990", "url": "https://pubmed.ncbi.nlm.nih.gov/28611990" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q86WA8-1", "protein_name": "Lon protease homolog 2, peroxisomal", "gene_name": "LONP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C024-1", "protein_name": "Peroxisomal coenzyme A diphosphatase NUDT7", "gene_name": "NUDT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14832-1", "protein_name": "Phytanoyl-CoA dioxygenase, peroxisomal", "gene_name": "PHYH", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15228-1", "protein_name": "Dihydroxyacetone phosphate acyltransferase", "gene_name": "GNPAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P39210-1", "protein_name": "Mitochondrial inner membrane protein Mpv17", "gene_name": "MPV17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22307-1", "protein_name": "Sterol carrier protein 2", "gene_name": "SCP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35914-1", "protein_name": "Hydroxymethylglutaryl-CoA lyase, mitochondrial", "gene_name": "HMGCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8MXV4-1", "protein_name": "Acyl-coenzyme A diphosphatase NUDT19", "gene_name": "NUDT19", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75381-1", "protein_name": "Peroxisomal membrane protein PEX14", "gene_name": "PEX14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13608-1", "protein_name": "Peroxisomal ATPase PEX6", "gene_name": "PEX6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28328-1", "protein_name": "Peroxisome biogenesis factor 2", "gene_name": "PEX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43933-1", "protein_name": "Peroxisomal ATPase PEX1", "gene_name": "PEX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99489-1", "protein_name": "D-aspartate oxidase", "gene_name": "DDO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61077-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D3", "gene_name": "UBE2D3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13011-1", "protein_name": "Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial", "gene_name": "ECH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51668-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D1", "gene_name": "UBE2D1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04040-1", "protein_name": "Catalase", "gene_name": "CAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14735-1", "protein_name": "Insulin-degrading enzyme", "gene_name": "IDE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2Q3-1", "protein_name": "Glutathione S-transferase kappa 1", "gene_name": "GSTK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z412-1", "protein_name": "Peroxisome assembly protein 26", "gene_name": "PEX26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P0Z9-1", "protein_name": "Peroxisomal sarcosine oxidase", "gene_name": "PIPOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99424-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 2", "gene_name": "ACOX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15067-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 1", "gene_name": "ACOX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08426-1", "protein_name": "Peroxisomal bifunctional enzyme", "gene_name": "EHHADH", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHK6-1", "protein_name": "Alpha-methylacyl-CoA racemase", "gene_name": "AMACR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35228-1", "protein_name": "Nitric oxide synthase, inducible", "gene_name": "NOS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FIF0-1", "protein_name": "AN1-type zinc finger protein 6", "gene_name": "ZFAND6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2T9J0-1", "protein_name": "Peroxisomal leader peptide-processing protease", "gene_name": "TYSND1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43155-1", "protein_name": "Carnitine O-acetyltransferase", "gene_name": "CRAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62837-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D2", "gene_name": "UBE2D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51659-1", "protein_name": "Peroxisomal multifunctional enzyme type 2", "gene_name": "HSD17B4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJM8-1", "protein_name": "2-Hydroxyacid oxidase 1", "gene_name": "HAO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKG9-1", "protein_name": "Peroxisomal carnitine O-octanoyltransferase", "gene_name": "CROT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6QHF9-2", "protein_name": "Peroxisomal N(1)-acetyl-spermine/spermidine oxidase", "gene_name": "PAOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21549-1", "protein_name": "Alanine--glyoxylate aminotransferase", "gene_name": "AGXT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92968-1", "protein_name": "Peroxisomal membrane protein PEX13", "gene_name": "PEX13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60683-1", "protein_name": "Peroxisome biogenesis factor 10", "gene_name": "PEX10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00623-1", "protein_name": "Peroxisome assembly protein 12", "gene_name": "PEX12", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00628-1", "protein_name": "Peroxisomal targeting signal 2 receptor", "gene_name": "PEX7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BY49-1", "protein_name": "Peroxisomal trans-2-enoyl-CoA reductase", "gene_name": "PECR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ83-1", "protein_name": "2-hydroxyacyl-CoA lyase 1", "gene_name": "HACL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NYQ3-1", "protein_name": "2-Hydroxyacid oxidase 2", "gene_name": "HAO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93008-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 9X", "gene_name": "USP9X", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14975-1", "protein_name": "Long-chain fatty acid transport protein 2", "gene_name": "SLC27A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14032-1", "protein_name": "Bile acid-CoA:amino acid N-acyltransferase", "gene_name": "BAAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09110-1", "protein_name": "3-ketoacyl-CoA thiolase, peroxisomal", "gene_name": "ACAA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NUI1-1", "protein_name": "Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]", "gene_name": "DECR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTZ2-1", "protein_name": "Dehydrogenase/reductase SDR family member 4", "gene_name": "DHRS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75874-1", "protein_name": "Isocitrate dehydrogenase [NADP] cytoplasmic", "gene_name": "IDH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P34913-1", "protein_name": "Bifunctional epoxide hydrolase 2", "gene_name": "EPHX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00116-1", "protein_name": "Alkyldihydroxyacetonephosphate synthase, peroxisomal", "gene_name": "AGPS", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14734-1", "protein_name": "Acyl-coenzyme A thioesterase 8", "gene_name": "ACOT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49753-1", "protein_name": "Acyl-coenzyme A thioesterase 2, mitochondrial", "gene_name": "ACOT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9L9-1", "protein_name": "Peroxisomal succinyl-coenzyme A thioesterase", "gene_name": "ACOT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14920-1", "protein_name": "D-amino-acid oxidase", "gene_name": "DAO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15254-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 3", "gene_name": "ACOX3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q86WA8", "url": "https://www.uniprot.org/uniprotkb/Q86WA8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.28611990", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 60 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The peroxisomal matrix protein translocon is a large cavity-forming protein assembly into which PEX5 protein enters to release its cargo.", "journal": "The Journal of biological chemistry", "date": "2017", "authors": "Dias AF, Rodrigues TA, Pedrosa AG, Barros-Barbosa A, Francisco T, Azevedo JE", "reference": { "type": "PubMed", "id": "28765278", "url": "https://pubmed.ncbi.nlm.nih.gov/28765278" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q86WA8-1", "protein_name": "Lon protease homolog 2, peroxisomal", "gene_name": "LONP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C024-1", "protein_name": "Peroxisomal coenzyme A diphosphatase NUDT7", "gene_name": "NUDT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14832-1", "protein_name": "Phytanoyl-CoA dioxygenase, peroxisomal", "gene_name": "PHYH", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15228-1", "protein_name": "Dihydroxyacetone phosphate acyltransferase", "gene_name": "GNPAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P39210-1", "protein_name": "Mitochondrial inner membrane protein Mpv17", "gene_name": "MPV17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22307-1", "protein_name": "Sterol carrier protein 2", "gene_name": "SCP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35914-1", "protein_name": "Hydroxymethylglutaryl-CoA lyase, mitochondrial", "gene_name": "HMGCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8MXV4-1", "protein_name": "Acyl-coenzyme A diphosphatase NUDT19", "gene_name": "NUDT19", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75381-1", "protein_name": "Peroxisomal membrane protein PEX14", "gene_name": "PEX14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13608-1", "protein_name": "Peroxisomal ATPase PEX6", "gene_name": "PEX6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28328-1", "protein_name": "Peroxisome biogenesis factor 2", "gene_name": "PEX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43933-1", "protein_name": "Peroxisomal ATPase PEX1", "gene_name": "PEX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99489-1", "protein_name": "D-aspartate oxidase", "gene_name": "DDO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61077-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D3", "gene_name": "UBE2D3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13011-1", "protein_name": "Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial", "gene_name": "ECH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51668-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D1", "gene_name": "UBE2D1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04040-1", "protein_name": "Catalase", "gene_name": "CAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14735-1", "protein_name": "Insulin-degrading enzyme", "gene_name": "IDE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2Q3-1", "protein_name": "Glutathione S-transferase kappa 1", "gene_name": "GSTK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z412-1", "protein_name": "Peroxisome assembly protein 26", "gene_name": "PEX26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P0Z9-1", "protein_name": "Peroxisomal sarcosine oxidase", "gene_name": "PIPOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99424-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 2", "gene_name": "ACOX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15067-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 1", "gene_name": "ACOX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08426-1", "protein_name": "Peroxisomal bifunctional enzyme", "gene_name": "EHHADH", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHK6-1", "protein_name": "Alpha-methylacyl-CoA racemase", "gene_name": "AMACR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35228-1", "protein_name": "Nitric oxide synthase, inducible", "gene_name": "NOS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FIF0-1", "protein_name": "AN1-type zinc finger protein 6", "gene_name": "ZFAND6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2T9J0-1", "protein_name": "Peroxisomal leader peptide-processing protease", "gene_name": "TYSND1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43155-1", "protein_name": "Carnitine O-acetyltransferase", "gene_name": "CRAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62837-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D2", "gene_name": "UBE2D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51659-1", "protein_name": "Peroxisomal multifunctional enzyme type 2", "gene_name": "HSD17B4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJM8-1", "protein_name": "2-Hydroxyacid oxidase 1", "gene_name": "HAO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKG9-1", "protein_name": "Peroxisomal carnitine O-octanoyltransferase", "gene_name": "CROT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6QHF9-2", "protein_name": "Peroxisomal N(1)-acetyl-spermine/spermidine oxidase", "gene_name": "PAOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21549-1", "protein_name": "Alanine--glyoxylate aminotransferase", "gene_name": "AGXT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92968-1", "protein_name": "Peroxisomal membrane protein PEX13", "gene_name": "PEX13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60683-1", "protein_name": "Peroxisome biogenesis factor 10", "gene_name": "PEX10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00623-1", "protein_name": "Peroxisome assembly protein 12", "gene_name": "PEX12", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00628-1", "protein_name": "Peroxisomal targeting signal 2 receptor", "gene_name": "PEX7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BY49-1", "protein_name": "Peroxisomal trans-2-enoyl-CoA reductase", "gene_name": "PECR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ83-1", "protein_name": "2-hydroxyacyl-CoA lyase 1", "gene_name": "HACL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NYQ3-1", "protein_name": "2-Hydroxyacid oxidase 2", "gene_name": "HAO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93008-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 9X", "gene_name": "USP9X", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14975-1", "protein_name": "Long-chain fatty acid transport protein 2", "gene_name": "SLC27A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14032-1", "protein_name": "Bile acid-CoA:amino acid N-acyltransferase", "gene_name": "BAAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09110-1", "protein_name": "3-ketoacyl-CoA thiolase, peroxisomal", "gene_name": "ACAA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NUI1-1", "protein_name": "Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]", "gene_name": "DECR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTZ2-1", "protein_name": "Dehydrogenase/reductase SDR family member 4", "gene_name": "DHRS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75874-1", "protein_name": "Isocitrate dehydrogenase [NADP] cytoplasmic", "gene_name": "IDH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P34913-1", "protein_name": "Bifunctional epoxide hydrolase 2", "gene_name": "EPHX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50542-1", "protein_name": "Peroxisomal targeting signal 1 receptor", "gene_name": "PEX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00116-1", "protein_name": "Alkyldihydroxyacetonephosphate synthase, peroxisomal", "gene_name": "AGPS", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14734-1", "protein_name": "Acyl-coenzyme A thioesterase 8", "gene_name": "ACOT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49753-1", "protein_name": "Acyl-coenzyme A thioesterase 2, mitochondrial", "gene_name": "ACOT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9L9-1", "protein_name": "Peroxisomal succinyl-coenzyme A thioesterase", "gene_name": "ACOT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14920-1", "protein_name": "D-amino-acid oxidase", "gene_name": "DAO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": 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[] } ] }, { "title": "Lon Peptidase 2, Peroxisomal (LONP2) Contributes to Cervical Carcinogenesis via Oxidative Stress.", "journal": "Medical science monitor : international medical journal of experimental and clinical research", "date": "2018", "authors": "Wu W, Liu F, Wu K, Chen Y, Wu H, Dai G, Zhang W", "reference": { "type": "PubMed", "id": "29502128", "url": "https://pubmed.ncbi.nlm.nih.gov/29502128" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q86WA8-1", "protein_name": "Lon protease homolog 2, peroxisomal", "gene_name": "LONP2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q86WA8", "url": "https://www.uniprot.org/uniprotkb/Q86WA8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.29502128", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": 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"Hydroxymethylglutaryl-CoA lyase, mitochondrial", "gene_name": "HMGCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8MXV4-1", "protein_name": "Acyl-coenzyme A diphosphatase NUDT19", "gene_name": "NUDT19", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75381-1", "protein_name": "Peroxisomal membrane protein PEX14", "gene_name": "PEX14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13608-1", "protein_name": "Peroxisomal ATPase PEX6", "gene_name": "PEX6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28328-1", "protein_name": "Peroxisome biogenesis factor 2", "gene_name": "PEX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43933-1", "protein_name": "Peroxisomal ATPase PEX1", "gene_name": "PEX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99489-1", "protein_name": "D-aspartate oxidase", "gene_name": "DDO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61077-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D3", "gene_name": "UBE2D3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13011-1", "protein_name": "Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial", "gene_name": "ECH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51668-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D1", "gene_name": "UBE2D1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04040-1", "protein_name": "Catalase", "gene_name": "CAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14735-1", "protein_name": "Insulin-degrading enzyme", "gene_name": "IDE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2Q3-1", "protein_name": "Glutathione S-transferase kappa 1", "gene_name": "GSTK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z412-1", "protein_name": "Peroxisome assembly protein 26", "gene_name": "PEX26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P0Z9-1", "protein_name": "Peroxisomal sarcosine oxidase", "gene_name": "PIPOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99424-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 2", "gene_name": "ACOX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15067-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 1", "gene_name": "ACOX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08426-1", "protein_name": "Peroxisomal bifunctional enzyme", "gene_name": "EHHADH", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHK6-1", "protein_name": "Alpha-methylacyl-CoA racemase", "gene_name": "AMACR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35228-1", "protein_name": "Nitric oxide synthase, inducible", "gene_name": "NOS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FIF0-1", "protein_name": "AN1-type zinc finger protein 6", "gene_name": "ZFAND6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2T9J0-1", "protein_name": "Peroxisomal leader peptide-processing protease", "gene_name": "TYSND1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43155-1", "protein_name": "Carnitine O-acetyltransferase", "gene_name": "CRAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62837-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D2", "gene_name": "UBE2D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51659-1", "protein_name": "Peroxisomal multifunctional enzyme type 2", "gene_name": "HSD17B4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJM8-1", "protein_name": "2-Hydroxyacid oxidase 1", "gene_name": "HAO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKG9-1", "protein_name": "Peroxisomal carnitine O-octanoyltransferase", "gene_name": "CROT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6QHF9-2", "protein_name": "Peroxisomal N(1)-acetyl-spermine/spermidine oxidase", "gene_name": "PAOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21549-1", "protein_name": "Alanine--glyoxylate aminotransferase", "gene_name": "AGXT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92968-1", "protein_name": "Peroxisomal membrane protein PEX13", "gene_name": "PEX13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60683-1", "protein_name": "Peroxisome biogenesis factor 10", "gene_name": "PEX10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00623-1", "protein_name": "Peroxisome assembly protein 12", "gene_name": "PEX12", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00628-1", "protein_name": "Peroxisomal targeting signal 2 receptor", "gene_name": "PEX7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BY49-1", "protein_name": "Peroxisomal trans-2-enoyl-CoA reductase", "gene_name": "PECR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ83-1", "protein_name": "2-hydroxyacyl-CoA lyase 1", "gene_name": "HACL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NYQ3-1", "protein_name": "2-Hydroxyacid oxidase 2", "gene_name": "HAO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93008-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 9X", "gene_name": "USP9X", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14975-1", "protein_name": "Long-chain fatty acid transport protein 2", "gene_name": "SLC27A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14032-1", "protein_name": "Bile acid-CoA:amino acid N-acyltransferase", "gene_name": "BAAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09110-1", "protein_name": "3-ketoacyl-CoA thiolase, peroxisomal", "gene_name": "ACAA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NUI1-1", "protein_name": "Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]", "gene_name": "DECR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTZ2-1", "protein_name": "Dehydrogenase/reductase SDR family member 4", "gene_name": "DHRS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75874-1", "protein_name": "Isocitrate dehydrogenase [NADP] cytoplasmic", "gene_name": "IDH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P34913-1", "protein_name": "Bifunctional epoxide hydrolase 2", "gene_name": "EPHX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50542-1", "protein_name": "Peroxisomal targeting signal 1 receptor", "gene_name": "PEX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00116-1", "protein_name": "Alkyldihydroxyacetonephosphate synthase, peroxisomal", "gene_name": "AGPS", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14734-1", "protein_name": "Acyl-coenzyme A thioesterase 8", "gene_name": "ACOT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49753-1", "protein_name": "Acyl-coenzyme A thioesterase 2, mitochondrial", "gene_name": "ACOT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9L9-1", "protein_name": "Peroxisomal succinyl-coenzyme A thioesterase", "gene_name": "ACOT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14920-1", "protein_name": "D-amino-acid oxidase", "gene_name": "DAO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15254-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 3", "gene_name": "ACOX3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q86WA8", "url": "https://www.uniprot.org/uniprotkb/Q86WA8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.7719337", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 61 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Human peroxisomal targeting signal-1 receptor restores peroxisomal protein import in cells from patients with fatal peroxisomal disorders.", "journal": "The Journal of cell biology", "date": "1995", "authors": "Wiemer EA, Nuttley WM, Bertolaet BL, Li X, Francke U, Wheelock MJ, Anne UK, Johnson KR, Subramani S", "reference": { "type": "PubMed", "id": "7790377", "url": "https://pubmed.ncbi.nlm.nih.gov/7790377" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q86WA8-1", "protein_name": "Lon protease homolog 2, peroxisomal", "gene_name": "LONP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C024-1", "protein_name": "Peroxisomal coenzyme A diphosphatase NUDT7", "gene_name": "NUDT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14832-1", "protein_name": "Phytanoyl-CoA dioxygenase, peroxisomal", "gene_name": "PHYH", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15228-1", "protein_name": "Dihydroxyacetone phosphate acyltransferase", "gene_name": "GNPAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P39210-1", "protein_name": "Mitochondrial inner membrane protein Mpv17", "gene_name": "MPV17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22307-1", "protein_name": "Sterol carrier protein 2", "gene_name": "SCP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35914-1", "protein_name": "Hydroxymethylglutaryl-CoA lyase, mitochondrial", "gene_name": "HMGCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8MXV4-1", "protein_name": "Acyl-coenzyme A diphosphatase NUDT19", "gene_name": "NUDT19", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75381-1", "protein_name": "Peroxisomal membrane protein PEX14", "gene_name": "PEX14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13608-1", "protein_name": "Peroxisomal ATPase PEX6", "gene_name": "PEX6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28328-1", "protein_name": "Peroxisome biogenesis factor 2", "gene_name": "PEX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43933-1", "protein_name": "Peroxisomal ATPase PEX1", "gene_name": "PEX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99489-1", "protein_name": "D-aspartate oxidase", "gene_name": "DDO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61077-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D3", "gene_name": "UBE2D3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13011-1", "protein_name": "Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial", "gene_name": "ECH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51668-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D1", "gene_name": "UBE2D1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04040-1", "protein_name": "Catalase", "gene_name": "CAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14735-1", "protein_name": "Insulin-degrading enzyme", "gene_name": "IDE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2Q3-1", "protein_name": "Glutathione S-transferase kappa 1", "gene_name": "GSTK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z412-1", "protein_name": "Peroxisome assembly protein 26", "gene_name": "PEX26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P0Z9-1", "protein_name": "Peroxisomal sarcosine oxidase", "gene_name": "PIPOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99424-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 2", "gene_name": "ACOX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15067-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 1", "gene_name": "ACOX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08426-1", "protein_name": "Peroxisomal bifunctional enzyme", "gene_name": "EHHADH", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHK6-1", "protein_name": "Alpha-methylacyl-CoA racemase", "gene_name": "AMACR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35228-1", "protein_name": "Nitric oxide synthase, inducible", "gene_name": "NOS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FIF0-1", "protein_name": "AN1-type zinc finger protein 6", "gene_name": "ZFAND6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2T9J0-1", "protein_name": "Peroxisomal leader peptide-processing protease", "gene_name": "TYSND1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43155-1", "protein_name": "Carnitine O-acetyltransferase", "gene_name": "CRAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62837-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D2", "gene_name": "UBE2D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51659-1", "protein_name": "Peroxisomal multifunctional enzyme type 2", "gene_name": "HSD17B4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJM8-1", "protein_name": "2-Hydroxyacid oxidase 1", "gene_name": "HAO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKG9-1", "protein_name": "Peroxisomal carnitine O-octanoyltransferase", "gene_name": "CROT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6QHF9-2", "protein_name": "Peroxisomal N(1)-acetyl-spermine/spermidine oxidase", "gene_name": "PAOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21549-1", "protein_name": "Alanine--glyoxylate aminotransferase", "gene_name": "AGXT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92968-1", "protein_name": "Peroxisomal membrane protein PEX13", "gene_name": "PEX13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60683-1", "protein_name": "Peroxisome biogenesis factor 10", "gene_name": "PEX10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00623-1", "protein_name": "Peroxisome assembly protein 12", "gene_name": "PEX12", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00628-1", "protein_name": "Peroxisomal targeting signal 2 receptor", "gene_name": "PEX7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BY49-1", "protein_name": "Peroxisomal trans-2-enoyl-CoA reductase", "gene_name": "PECR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ83-1", "protein_name": "2-hydroxyacyl-CoA lyase 1", "gene_name": "HACL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NYQ3-1", "protein_name": "2-Hydroxyacid oxidase 2", "gene_name": "HAO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93008-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 9X", "gene_name": "USP9X", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14975-1", "protein_name": "Long-chain fatty acid transport protein 2", "gene_name": "SLC27A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14032-1", "protein_name": "Bile acid-CoA:amino acid N-acyltransferase", "gene_name": "BAAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09110-1", "protein_name": "3-ketoacyl-CoA thiolase, peroxisomal", "gene_name": "ACAA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NUI1-1", "protein_name": "Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]", "gene_name": "DECR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTZ2-1", "protein_name": "Dehydrogenase/reductase SDR family member 4", "gene_name": "DHRS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75874-1", "protein_name": "Isocitrate dehydrogenase [NADP] cytoplasmic", "gene_name": "IDH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P34913-1", "protein_name": "Bifunctional epoxide hydrolase 2", "gene_name": "EPHX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50542-1", "protein_name": "Peroxisomal targeting signal 1 receptor", "gene_name": "PEX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00116-1", "protein_name": "Alkyldihydroxyacetonephosphate synthase, peroxisomal", "gene_name": "AGPS", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14734-1", "protein_name": "Acyl-coenzyme A thioesterase 8", "gene_name": "ACOT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49753-1", "protein_name": "Acyl-coenzyme A thioesterase 2, mitochondrial", "gene_name": "ACOT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9L9-1", "protein_name": "Peroxisomal succinyl-coenzyme A thioesterase", "gene_name": "ACOT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14920-1", "protein_name": "D-amino-acid oxidase", "gene_name": "DAO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15254-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 3", "gene_name": "ACOX3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q86WA8", "url": "https://www.uniprot.org/uniprotkb/Q86WA8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.7790377", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 61 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Characterization of the yeast and human receptors for the carboxy-terminal tripeptide peroxisomal targeting signal.", "journal": "Cold Spring Harbor symposia on quantitative biology", "date": "1995", "authors": "Wiemer EA, Terlecky SR, Nuttley WM, Subramani S", "reference": { "type": "PubMed", "id": "8824437", "url": "https://pubmed.ncbi.nlm.nih.gov/8824437" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q86WA8-1", "protein_name": "Lon protease homolog 2, peroxisomal", "gene_name": "LONP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C024-1", "protein_name": "Peroxisomal coenzyme A diphosphatase NUDT7", "gene_name": "NUDT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14832-1", "protein_name": "Phytanoyl-CoA dioxygenase, peroxisomal", "gene_name": "PHYH", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15228-1", "protein_name": "Dihydroxyacetone phosphate acyltransferase", "gene_name": "GNPAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P39210-1", "protein_name": "Mitochondrial inner membrane protein Mpv17", "gene_name": "MPV17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22307-1", "protein_name": "Sterol carrier protein 2", "gene_name": "SCP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35914-1", "protein_name": "Hydroxymethylglutaryl-CoA lyase, mitochondrial", "gene_name": "HMGCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8MXV4-1", "protein_name": "Acyl-coenzyme A diphosphatase NUDT19", "gene_name": "NUDT19", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75381-1", "protein_name": "Peroxisomal membrane protein PEX14", "gene_name": "PEX14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13608-1", "protein_name": "Peroxisomal ATPase PEX6", "gene_name": "PEX6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28328-1", "protein_name": "Peroxisome biogenesis factor 2", "gene_name": "PEX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43933-1", "protein_name": "Peroxisomal ATPase PEX1", "gene_name": "PEX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99489-1", "protein_name": "D-aspartate oxidase", "gene_name": "DDO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61077-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D3", "gene_name": "UBE2D3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13011-1", "protein_name": "Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial", "gene_name": "ECH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51668-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D1", "gene_name": "UBE2D1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04040-1", "protein_name": "Catalase", "gene_name": "CAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14735-1", "protein_name": "Insulin-degrading enzyme", "gene_name": "IDE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2Q3-1", "protein_name": "Glutathione S-transferase kappa 1", "gene_name": "GSTK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z412-1", "protein_name": "Peroxisome assembly protein 26", "gene_name": "PEX26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P0Z9-1", "protein_name": "Peroxisomal sarcosine oxidase", "gene_name": "PIPOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99424-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 2", "gene_name": "ACOX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15067-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 1", "gene_name": "ACOX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08426-1", "protein_name": "Peroxisomal bifunctional enzyme", "gene_name": "EHHADH", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHK6-1", "protein_name": "Alpha-methylacyl-CoA racemase", "gene_name": "AMACR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35228-1", "protein_name": "Nitric oxide synthase, inducible", "gene_name": "NOS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FIF0-1", "protein_name": "AN1-type zinc finger protein 6", "gene_name": "ZFAND6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2T9J0-1", "protein_name": "Peroxisomal leader peptide-processing protease", "gene_name": "TYSND1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43155-1", "protein_name": "Carnitine O-acetyltransferase", "gene_name": "CRAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62837-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D2", "gene_name": "UBE2D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51659-1", "protein_name": "Peroxisomal multifunctional enzyme type 2", "gene_name": "HSD17B4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJM8-1", "protein_name": "2-Hydroxyacid oxidase 1", "gene_name": "HAO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKG9-1", "protein_name": "Peroxisomal carnitine O-octanoyltransferase", "gene_name": "CROT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6QHF9-2", "protein_name": "Peroxisomal N(1)-acetyl-spermine/spermidine oxidase", "gene_name": "PAOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21549-1", "protein_name": "Alanine--glyoxylate aminotransferase", "gene_name": "AGXT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92968-1", "protein_name": "Peroxisomal membrane protein PEX13", "gene_name": "PEX13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60683-1", "protein_name": "Peroxisome biogenesis factor 10", "gene_name": "PEX10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00623-1", "protein_name": "Peroxisome assembly protein 12", "gene_name": "PEX12", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00628-1", "protein_name": "Peroxisomal targeting signal 2 receptor", "gene_name": "PEX7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BY49-1", "protein_name": "Peroxisomal trans-2-enoyl-CoA reductase", "gene_name": "PECR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ83-1", "protein_name": "2-hydroxyacyl-CoA lyase 1", "gene_name": "HACL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NYQ3-1", "protein_name": "2-Hydroxyacid oxidase 2", "gene_name": "HAO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93008-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 9X", "gene_name": "USP9X", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14975-1", "protein_name": "Long-chain fatty acid transport protein 2", "gene_name": "SLC27A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14032-1", "protein_name": "Bile acid-CoA:amino acid N-acyltransferase", "gene_name": "BAAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09110-1", "protein_name": "3-ketoacyl-CoA thiolase, peroxisomal", "gene_name": "ACAA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NUI1-1", "protein_name": "Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]", "gene_name": "DECR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTZ2-1", "protein_name": "Dehydrogenase/reductase SDR family member 4", "gene_name": "DHRS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75874-1", "protein_name": "Isocitrate dehydrogenase [NADP] cytoplasmic", "gene_name": "IDH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P34913-1", "protein_name": "Bifunctional epoxide hydrolase 2", "gene_name": "EPHX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00116-1", "protein_name": "Alkyldihydroxyacetonephosphate synthase, peroxisomal", "gene_name": "AGPS", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14734-1", "protein_name": "Acyl-coenzyme A thioesterase 8", "gene_name": "ACOT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49753-1", "protein_name": "Acyl-coenzyme A thioesterase 2, mitochondrial", "gene_name": "ACOT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9L9-1", "protein_name": "Peroxisomal succinyl-coenzyme A thioesterase", "gene_name": "ACOT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14920-1", "protein_name": "D-amino-acid oxidase", "gene_name": "DAO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15254-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 3", "gene_name": "ACOX3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q86WA8", "url": "https://www.uniprot.org/uniprotkb/Q86WA8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8824437", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 60 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Pex13p is an SH3 protein of the peroxisome membrane and a docking factor for the predominantly cytoplasmic PTs1 receptor.", "journal": "The Journal of cell biology", "date": "1996", "authors": "Gould SJ, Kalish JE, Morrell JC, Bjorkman J, Urquhart AJ, Crane DI", "reference": { "type": "PubMed", "id": "8858165", "url": "https://pubmed.ncbi.nlm.nih.gov/8858165" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q86WA8-1", "protein_name": "Lon protease homolog 2, peroxisomal", "gene_name": "LONP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C024-1", "protein_name": "Peroxisomal coenzyme A diphosphatase NUDT7", "gene_name": "NUDT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14832-1", "protein_name": "Phytanoyl-CoA dioxygenase, peroxisomal", "gene_name": "PHYH", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15228-1", "protein_name": "Dihydroxyacetone phosphate acyltransferase", "gene_name": "GNPAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P39210-1", "protein_name": "Mitochondrial inner membrane protein Mpv17", "gene_name": "MPV17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22307-1", "protein_name": "Sterol carrier protein 2", "gene_name": "SCP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35914-1", "protein_name": "Hydroxymethylglutaryl-CoA lyase, mitochondrial", "gene_name": "HMGCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8MXV4-1", "protein_name": "Acyl-coenzyme A diphosphatase NUDT19", "gene_name": "NUDT19", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75381-1", "protein_name": "Peroxisomal membrane protein PEX14", "gene_name": "PEX14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13608-1", "protein_name": "Peroxisomal ATPase PEX6", "gene_name": "PEX6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28328-1", "protein_name": "Peroxisome biogenesis factor 2", "gene_name": "PEX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43933-1", "protein_name": "Peroxisomal ATPase PEX1", "gene_name": "PEX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99489-1", "protein_name": "D-aspartate oxidase", "gene_name": "DDO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61077-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D3", "gene_name": "UBE2D3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13011-1", "protein_name": "Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial", "gene_name": "ECH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51668-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D1", "gene_name": "UBE2D1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04040-1", "protein_name": "Catalase", "gene_name": "CAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14735-1", "protein_name": "Insulin-degrading enzyme", "gene_name": "IDE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2Q3-1", "protein_name": "Glutathione S-transferase kappa 1", "gene_name": "GSTK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z412-1", "protein_name": "Peroxisome assembly protein 26", "gene_name": "PEX26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P0Z9-1", "protein_name": "Peroxisomal sarcosine oxidase", "gene_name": "PIPOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99424-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 2", "gene_name": "ACOX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15067-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 1", "gene_name": "ACOX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08426-1", "protein_name": "Peroxisomal bifunctional enzyme", "gene_name": "EHHADH", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHK6-1", "protein_name": "Alpha-methylacyl-CoA racemase", "gene_name": "AMACR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35228-1", "protein_name": "Nitric oxide synthase, inducible", "gene_name": "NOS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FIF0-1", "protein_name": "AN1-type zinc finger protein 6", "gene_name": "ZFAND6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2T9J0-1", "protein_name": "Peroxisomal leader peptide-processing protease", "gene_name": "TYSND1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43155-1", "protein_name": "Carnitine O-acetyltransferase", "gene_name": "CRAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62837-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D2", "gene_name": "UBE2D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51659-1", "protein_name": "Peroxisomal multifunctional enzyme type 2", "gene_name": "HSD17B4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJM8-1", "protein_name": "2-Hydroxyacid oxidase 1", "gene_name": "HAO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKG9-1", "protein_name": "Peroxisomal carnitine O-octanoyltransferase", "gene_name": "CROT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6QHF9-2", "protein_name": "Peroxisomal N(1)-acetyl-spermine/spermidine oxidase", "gene_name": "PAOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21549-1", "protein_name": "Alanine--glyoxylate aminotransferase", "gene_name": "AGXT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92968-1", "protein_name": "Peroxisomal membrane protein PEX13", "gene_name": "PEX13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60683-1", "protein_name": "Peroxisome biogenesis factor 10", "gene_name": "PEX10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00623-1", "protein_name": "Peroxisome assembly protein 12", "gene_name": "PEX12", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00628-1", "protein_name": "Peroxisomal targeting signal 2 receptor", "gene_name": "PEX7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BY49-1", "protein_name": "Peroxisomal trans-2-enoyl-CoA reductase", "gene_name": "PECR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ83-1", "protein_name": "2-hydroxyacyl-CoA lyase 1", "gene_name": "HACL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NYQ3-1", "protein_name": "2-Hydroxyacid oxidase 2", "gene_name": "HAO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93008-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 9X", "gene_name": "USP9X", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14975-1", "protein_name": "Long-chain fatty acid transport protein 2", "gene_name": "SLC27A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14032-1", "protein_name": "Bile acid-CoA:amino acid N-acyltransferase", "gene_name": "BAAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09110-1", "protein_name": "3-ketoacyl-CoA thiolase, peroxisomal", "gene_name": "ACAA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NUI1-1", "protein_name": "Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]", "gene_name": "DECR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTZ2-1", "protein_name": "Dehydrogenase/reductase SDR family member 4", "gene_name": "DHRS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75874-1", "protein_name": "Isocitrate dehydrogenase [NADP] cytoplasmic", "gene_name": "IDH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P34913-1", "protein_name": "Bifunctional epoxide hydrolase 2", "gene_name": "EPHX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00116-1", "protein_name": "Alkyldihydroxyacetonephosphate synthase, peroxisomal", "gene_name": "AGPS", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14734-1", "protein_name": "Acyl-coenzyme A thioesterase 8", "gene_name": "ACOT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49753-1", "protein_name": "Acyl-coenzyme A thioesterase 2, mitochondrial", "gene_name": "ACOT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9L9-1", "protein_name": "Peroxisomal succinyl-coenzyme A thioesterase", "gene_name": "ACOT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14920-1", "protein_name": "D-amino-acid oxidase", "gene_name": "DAO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15254-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 3", "gene_name": "ACOX3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q86WA8", "url": "https://www.uniprot.org/uniprotkb/Q86WA8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8858165", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 60 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Multiple PEX genes are required for proper subcellular distribution and stability of Pex5p, the PTS1 receptor: evidence that PTS1 protein import is mediated by a cycling receptor.", "journal": "The Journal of cell biology", "date": "1996", "authors": "Dodt G, Gould SJ", "reference": { "type": "PubMed", "id": "8991089", "url": "https://pubmed.ncbi.nlm.nih.gov/8991089" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q86WA8-1", "protein_name": "Lon protease homolog 2, peroxisomal", "gene_name": "LONP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE4-1", "protein_name": "Selenoprotein S", "gene_name": "SELENOS", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95999-1", "protein_name": "B-cell lymphoma/leukemia 10", "gene_name": "BCL10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68036-1", "protein_name": "Ubiquitin-conjugating enzyme E2 L3", "gene_name": "UBE2L3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C024-1", "protein_name": "Peroxisomal coenzyme A diphosphatase NUDT7", "gene_name": "NUDT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14832-1", "protein_name": "Phytanoyl-CoA dioxygenase, peroxisomal", "gene_name": "PHYH", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15228-1", "protein_name": "Dihydroxyacetone phosphate acyltransferase", "gene_name": "GNPAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P39210-1", "protein_name": "Mitochondrial inner membrane protein Mpv17", "gene_name": "MPV17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22307-1", "protein_name": "Sterol carrier protein 2", "gene_name": "SCP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35914-1", "protein_name": "Hydroxymethylglutaryl-CoA lyase, mitochondrial", "gene_name": "HMGCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14527-1", "protein_name": "DNA-dependent ATPase/E3 ubiquitin-protein ligase HLTF", "gene_name": "HLTF", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8MXV4-1", "protein_name": "Acyl-coenzyme A diphosphatase NUDT19", "gene_name": "NUDT19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NS91-1", "protein_name": "E3 ubiquitin-protein ligase RAD18", "gene_name": "RAD18", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75381-1", "protein_name": "Peroxisomal membrane protein PEX14", "gene_name": "PEX14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13608-1", "protein_name": "Peroxisomal ATPase PEX6", "gene_name": "PEX6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28328-1", "protein_name": "Peroxisome biogenesis factor 2", "gene_name": "PEX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43933-1", "protein_name": "Peroxisomal ATPase PEX1", "gene_name": "PEX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99489-1", "protein_name": "D-aspartate oxidase", "gene_name": "DDO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N8N0-1", "protein_name": "E3 ubiquitin-protein ligase RNF152", "gene_name": "RNF152", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P0P0-1", "protein_name": "E3 ubiquitin-protein ligase RNF181", "gene_name": "RNF181", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N7H5-1", "protein_name": "RNA polymerase II-associated factor 1 homolog", "gene_name": "PAF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PD62-1", "protein_name": "RNA polymerase-associated protein CTR9 homolog", "gene_name": "CTR9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVC0-1", "protein_name": "RNA polymerase-associated protein LEO1", "gene_name": "LEO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92541-1", "protein_name": "RNA polymerase-associated protein RTF1 homolog", "gene_name": "RTF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61077-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D3", "gene_name": "UBE2D3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13011-1", "protein_name": "Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial", "gene_name": "ECH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51668-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D1", "gene_name": "UBE2D1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUN8-1", "protein_name": "Derlin-1", "gene_name": "DERL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04040-1", "protein_name": "Catalase", "gene_name": "CAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14735-1", "protein_name": "Insulin-degrading enzyme", "gene_name": "IDE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2Q3-1", "protein_name": "Glutathione S-transferase kappa 1", "gene_name": "GSTK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z412-1", "protein_name": "Peroxisome assembly protein 26", "gene_name": "PEX26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P0Z9-1", "protein_name": "Peroxisomal sarcosine oxidase", "gene_name": "PIPOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L523-1", "protein_name": "Ras-related GTP-binding protein A", "gene_name": "RRAGA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04439-1", "protein_name": "HLA class I histocompatibility antigen, A alpha chain", "gene_name": "HLA-A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99424-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 2", "gene_name": "ACOX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55072-1", "protein_name": "Transitional endoplasmic reticulum ATPase", "gene_name": "VCP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15067-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 1", "gene_name": "ACOX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTA9-1", "protein_name": "WW domain-containing adapter protein with coiled-coil", "gene_name": "WAC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VTR2-1", "protein_name": "E3 ubiquitin-protein ligase BRE1A", "gene_name": "RNF20", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75150-1", "protein_name": "E3 ubiquitin-protein ligase BRE1B", "gene_name": "RNF40", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12004-1", "protein_name": "DNA sliding clamp PCNA", "gene_name": "PCNA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08426-1", "protein_name": "Peroxisomal bifunctional enzyme", "gene_name": "EHHADH", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHK6-1", "protein_name": "Alpha-methylacyl-CoA racemase", "gene_name": "AMACR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62807-1", "protein_name": "Histone H2B type 1-C/E/F/G/I", "gene_name": "H2BC10; H2BC4; H2BC6; H2BC7; H2BC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78527-1", "protein_name": "DNA-dependent protein kinase catalytic subunit", "gene_name": "PRKDC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZS3-1", "protein_name": "Superkiller complex protein 8", "gene_name": "SKIC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35228-1", "protein_name": "Nitric oxide synthase, inducible", "gene_name": "NOS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N2K1-1", "protein_name": "Ubiquitin-conjugating enzyme E2 J2", "gene_name": "UBE2J2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FIF0-1", "protein_name": "AN1-type zinc finger protein 6", "gene_name": "ZFAND6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2T9J0-1", "protein_name": "Peroxisomal leader peptide-processing protease", "gene_name": "TYSND1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P1J9-1", "protein_name": "Parafibromin", "gene_name": "CDC73", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43155-1", "protein_name": "Carnitine O-acetyltransferase", "gene_name": "CRAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q149N8-1", "protein_name": "E3 ubiquitin-protein ligase SHPRH", "gene_name": "SHPRH", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61088-1", "protein_name": "Ubiquitin-conjugating enzyme E2 N", "gene_name": "UBE2N", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51965-1", "protein_name": "Ubiquitin-conjugating enzyme E2 E1", "gene_name": "UBE2E1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62837-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D2", "gene_name": "UBE2D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51659-1", "protein_name": "Peroxisomal multifunctional enzyme type 2", "gene_name": "HSD17B4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 1-O", "gene_name": "H2BC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJM8-1", "protein_name": "2-Hydroxyacid oxidase 1", "gene_name": "HAO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKG9-1", "protein_name": "Peroxisomal carnitine O-octanoyltransferase", "gene_name": "CROT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6QHF9-2", "protein_name": "Peroxisomal N(1)-acetyl-spermine/spermidine oxidase", "gene_name": "PAOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21549-1", "protein_name": "Alanine--glyoxylate aminotransferase", "gene_name": "AGXT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92968-1", "protein_name": "Peroxisomal membrane protein PEX13", "gene_name": "PEX13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60683-1", "protein_name": "Peroxisome biogenesis factor 10", "gene_name": "PEX10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00623-1", "protein_name": "Peroxisome assembly protein 12", "gene_name": "PEX12", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00628-1", "protein_name": "Peroxisomal targeting signal 2 receptor", "gene_name": "PEX7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BY49-1", "protein_name": "Peroxisomal trans-2-enoyl-CoA reductase", "gene_name": "PECR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50876-1", "protein_name": "E3 ubiquitin-protein ligase RNF144A", "gene_name": "RNF144A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49459-1", "protein_name": "Ubiquitin-conjugating enzyme E2 A", "gene_name": "UBE2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ83-1", "protein_name": "2-hydroxyacyl-CoA lyase 1", "gene_name": "HACL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NYQ3-1", "protein_name": "2-Hydroxyacid oxidase 2", "gene_name": "HAO2", 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"referenced_proteins": [ { "uniprot_canonical_ac": "Q86WA8-1", "protein_name": "Lon protease homolog 2, peroxisomal", "gene_name": "LONP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C024-1", "protein_name": "Peroxisomal coenzyme A diphosphatase NUDT7", "gene_name": "NUDT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14832-1", "protein_name": "Phytanoyl-CoA dioxygenase, peroxisomal", "gene_name": "PHYH", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15228-1", "protein_name": "Dihydroxyacetone phosphate acyltransferase", "gene_name": "GNPAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P39210-1", "protein_name": "Mitochondrial inner membrane protein Mpv17", "gene_name": "MPV17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22307-1", "protein_name": "Sterol carrier protein 2", "gene_name": "SCP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35914-1", "protein_name": "Hydroxymethylglutaryl-CoA lyase, mitochondrial", "gene_name": "HMGCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8MXV4-1", "protein_name": "Acyl-coenzyme A diphosphatase NUDT19", "gene_name": "NUDT19", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75381-1", "protein_name": "Peroxisomal membrane protein PEX14", "gene_name": "PEX14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13608-1", "protein_name": "Peroxisomal ATPase PEX6", "gene_name": "PEX6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28328-1", "protein_name": "Peroxisome biogenesis factor 2", "gene_name": "PEX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43933-1", "protein_name": "Peroxisomal ATPase PEX1", "gene_name": "PEX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99489-1", "protein_name": "D-aspartate oxidase", "gene_name": "DDO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61077-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D3", "gene_name": "UBE2D3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13011-1", "protein_name": "Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial", "gene_name": "ECH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51668-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D1", "gene_name": "UBE2D1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04040-1", "protein_name": "Catalase", "gene_name": "CAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14735-1", "protein_name": "Insulin-degrading enzyme", "gene_name": "IDE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2Q3-1", "protein_name": "Glutathione S-transferase kappa 1", "gene_name": "GSTK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z412-1", "protein_name": "Peroxisome assembly protein 26", "gene_name": "PEX26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P0Z9-1", "protein_name": "Peroxisomal sarcosine oxidase", "gene_name": "PIPOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99424-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 2", "gene_name": "ACOX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15067-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 1", "gene_name": "ACOX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08426-1", "protein_name": "Peroxisomal bifunctional enzyme", "gene_name": "EHHADH", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHK6-1", "protein_name": "Alpha-methylacyl-CoA racemase", "gene_name": "AMACR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35228-1", "protein_name": "Nitric oxide synthase, inducible", "gene_name": "NOS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FIF0-1", "protein_name": "AN1-type zinc finger protein 6", "gene_name": "ZFAND6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2T9J0-1", "protein_name": "Peroxisomal leader peptide-processing protease", "gene_name": "TYSND1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43155-1", "protein_name": "Carnitine O-acetyltransferase", "gene_name": "CRAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62837-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D2", "gene_name": "UBE2D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51659-1", "protein_name": "Peroxisomal multifunctional enzyme type 2", "gene_name": "HSD17B4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJM8-1", "protein_name": "2-Hydroxyacid oxidase 1", "gene_name": "HAO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKG9-1", "protein_name": "Peroxisomal carnitine O-octanoyltransferase", "gene_name": "CROT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6QHF9-2", "protein_name": "Peroxisomal N(1)-acetyl-spermine/spermidine oxidase", "gene_name": "PAOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21549-1", "protein_name": "Alanine--glyoxylate aminotransferase", "gene_name": "AGXT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92968-1", "protein_name": "Peroxisomal membrane protein PEX13", "gene_name": "PEX13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60683-1", "protein_name": "Peroxisome biogenesis factor 10", "gene_name": "PEX10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00623-1", "protein_name": "Peroxisome assembly protein 12", "gene_name": "PEX12", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00628-1", "protein_name": "Peroxisomal targeting signal 2 receptor", "gene_name": "PEX7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BY49-1", "protein_name": "Peroxisomal trans-2-enoyl-CoA reductase", "gene_name": "PECR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ83-1", "protein_name": "2-hydroxyacyl-CoA lyase 1", "gene_name": "HACL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NYQ3-1", "protein_name": "2-Hydroxyacid oxidase 2", "gene_name": "HAO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93008-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 9X", "gene_name": "USP9X", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14975-1", "protein_name": "Long-chain fatty acid transport protein 2", "gene_name": "SLC27A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14032-1", "protein_name": "Bile acid-CoA:amino acid N-acyltransferase", "gene_name": "BAAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09110-1", "protein_name": "3-ketoacyl-CoA thiolase, peroxisomal", "gene_name": "ACAA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NUI1-1", "protein_name": "Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]", "gene_name": "DECR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTZ2-1", "protein_name": "Dehydrogenase/reductase SDR family member 4", "gene_name": "DHRS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75874-1", "protein_name": "Isocitrate dehydrogenase [NADP] cytoplasmic", "gene_name": "IDH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P34913-1", "protein_name": "Bifunctional epoxide hydrolase 2", "gene_name": "EPHX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00116-1", "protein_name": "Alkyldihydroxyacetonephosphate synthase, peroxisomal", "gene_name": "AGPS", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14734-1", "protein_name": "Acyl-coenzyme A thioesterase 8", "gene_name": "ACOT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49753-1", "protein_name": "Acyl-coenzyme A thioesterase 2, mitochondrial", "gene_name": "ACOT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9L9-1", "protein_name": "Peroxisomal succinyl-coenzyme A thioesterase", "gene_name": "ACOT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14920-1", "protein_name": "D-amino-acid oxidase", "gene_name": "DAO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15254-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 3", "gene_name": "ACOX3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q86WA8", "url": "https://www.uniprot.org/uniprotkb/Q86WA8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9090382", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 60 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Rhizomelic chondrodysplasia punctata is caused by deficiency of human PEX7, a homologue of the yeast PTS2 receptor.", "journal": "Nature genetics", "date": "1997", "authors": "Purdue PE, Zhang JW, Skoneczny M, Lazarow PB", "reference": { "type": "PubMed", "id": "9090383", "url": "https://pubmed.ncbi.nlm.nih.gov/9090383" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q86WA8-1", "protein_name": "Lon protease homolog 2, peroxisomal", "gene_name": "LONP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C024-1", "protein_name": "Peroxisomal coenzyme A diphosphatase NUDT7", "gene_name": "NUDT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14832-1", "protein_name": "Phytanoyl-CoA dioxygenase, peroxisomal", "gene_name": "PHYH", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15228-1", "protein_name": "Dihydroxyacetone phosphate acyltransferase", "gene_name": "GNPAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P39210-1", "protein_name": "Mitochondrial inner membrane protein Mpv17", "gene_name": "MPV17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22307-1", "protein_name": "Sterol carrier protein 2", "gene_name": "SCP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35914-1", "protein_name": "Hydroxymethylglutaryl-CoA lyase, mitochondrial", "gene_name": "HMGCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8MXV4-1", "protein_name": "Acyl-coenzyme A diphosphatase NUDT19", "gene_name": "NUDT19", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75381-1", "protein_name": "Peroxisomal membrane protein PEX14", "gene_name": "PEX14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13608-1", "protein_name": "Peroxisomal ATPase PEX6", "gene_name": "PEX6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28328-1", "protein_name": "Peroxisome biogenesis factor 2", "gene_name": "PEX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43933-1", "protein_name": "Peroxisomal ATPase PEX1", "gene_name": "PEX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99489-1", "protein_name": "D-aspartate oxidase", "gene_name": "DDO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61077-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D3", "gene_name": "UBE2D3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13011-1", "protein_name": "Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial", "gene_name": "ECH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51668-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D1", "gene_name": "UBE2D1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04040-1", "protein_name": "Catalase", "gene_name": "CAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14735-1", "protein_name": "Insulin-degrading enzyme", "gene_name": "IDE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2Q3-1", "protein_name": "Glutathione S-transferase kappa 1", "gene_name": "GSTK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z412-1", "protein_name": "Peroxisome assembly protein 26", "gene_name": "PEX26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P0Z9-1", "protein_name": "Peroxisomal sarcosine oxidase", "gene_name": "PIPOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99424-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 2", "gene_name": "ACOX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15067-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 1", "gene_name": "ACOX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08426-1", "protein_name": "Peroxisomal bifunctional enzyme", "gene_name": "EHHADH", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHK6-1", "protein_name": "Alpha-methylacyl-CoA racemase", "gene_name": "AMACR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35228-1", "protein_name": "Nitric oxide synthase, inducible", "gene_name": "NOS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FIF0-1", "protein_name": "AN1-type zinc finger protein 6", "gene_name": "ZFAND6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2T9J0-1", "protein_name": "Peroxisomal leader peptide-processing protease", "gene_name": "TYSND1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43155-1", "protein_name": "Carnitine O-acetyltransferase", "gene_name": "CRAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62837-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D2", "gene_name": "UBE2D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51659-1", "protein_name": "Peroxisomal multifunctional enzyme type 2", "gene_name": "HSD17B4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJM8-1", "protein_name": "2-Hydroxyacid oxidase 1", "gene_name": "HAO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKG9-1", "protein_name": "Peroxisomal carnitine O-octanoyltransferase", "gene_name": "CROT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6QHF9-2", "protein_name": "Peroxisomal N(1)-acetyl-spermine/spermidine oxidase", "gene_name": "PAOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21549-1", "protein_name": "Alanine--glyoxylate aminotransferase", "gene_name": "AGXT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92968-1", "protein_name": "Peroxisomal membrane protein PEX13", "gene_name": "PEX13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60683-1", "protein_name": "Peroxisome biogenesis factor 10", "gene_name": "PEX10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00623-1", "protein_name": "Peroxisome assembly protein 12", "gene_name": "PEX12", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00628-1", "protein_name": "Peroxisomal targeting signal 2 receptor", "gene_name": "PEX7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BY49-1", "protein_name": "Peroxisomal trans-2-enoyl-CoA reductase", "gene_name": "PECR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ83-1", "protein_name": "2-hydroxyacyl-CoA lyase 1", "gene_name": "HACL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NYQ3-1", "protein_name": "2-Hydroxyacid oxidase 2", "gene_name": "HAO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93008-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 9X", "gene_name": "USP9X", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14975-1", "protein_name": "Long-chain fatty acid transport protein 2", "gene_name": "SLC27A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14032-1", "protein_name": "Bile acid-CoA:amino acid N-acyltransferase", "gene_name": "BAAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09110-1", "protein_name": "3-ketoacyl-CoA thiolase, peroxisomal", "gene_name": "ACAA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NUI1-1", "protein_name": "Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]", "gene_name": "DECR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTZ2-1", "protein_name": "Dehydrogenase/reductase SDR family member 4", "gene_name": "DHRS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75874-1", "protein_name": "Isocitrate dehydrogenase [NADP] cytoplasmic", "gene_name": "IDH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P34913-1", "protein_name": "Bifunctional epoxide hydrolase 2", "gene_name": "EPHX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00116-1", "protein_name": "Alkyldihydroxyacetonephosphate synthase, peroxisomal", "gene_name": "AGPS", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14734-1", "protein_name": "Acyl-coenzyme A thioesterase 8", "gene_name": "ACOT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49753-1", "protein_name": "Acyl-coenzyme A thioesterase 2, mitochondrial", "gene_name": "ACOT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9L9-1", "protein_name": "Peroxisomal succinyl-coenzyme A thioesterase", "gene_name": "ACOT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14920-1", "protein_name": "D-amino-acid oxidase", "gene_name": "DAO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15254-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 3", "gene_name": "ACOX3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q86WA8", "url": "https://www.uniprot.org/uniprotkb/Q86WA8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9090383", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 60 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Human PEX1 cloned by functional complementation on a CHO cell mutant is responsible for peroxisome-deficient Zellweger syndrome of complementation group I.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "1998", "authors": "Tamura S, Okumoto K, Toyama R, Shimozawa N, Tsukamoto T, Suzuki Y, Osumi T, Kondo N, Fujiki Y", "reference": { "type": "PubMed", "id": "9539740", "url": "https://pubmed.ncbi.nlm.nih.gov/9539740" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q86WA8-1", "protein_name": "Lon protease homolog 2, peroxisomal", "gene_name": "LONP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C024-1", "protein_name": "Peroxisomal coenzyme A diphosphatase NUDT7", "gene_name": "NUDT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14832-1", "protein_name": "Phytanoyl-CoA dioxygenase, peroxisomal", "gene_name": "PHYH", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15228-1", "protein_name": "Dihydroxyacetone phosphate acyltransferase", "gene_name": "GNPAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P39210-1", "protein_name": "Mitochondrial inner membrane protein Mpv17", "gene_name": "MPV17", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A061IR73-1", "protein_name": "Peroxisomal ATPase PEX6", "gene_name": "PEX6", "tax_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3GXG9-1", "protein_name": "Peroxisomal ATPase PEX1", "gene_name": "PEX1", "tax_name": "Chinese hamster" }, { "uniprot_canonical_ac": "P22307-1", "protein_name": "Sterol carrier protein 2", "gene_name": "SCP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35914-1", "protein_name": "Hydroxymethylglutaryl-CoA lyase, mitochondrial", "gene_name": "HMGCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8MXV4-1", "protein_name": "Acyl-coenzyme A diphosphatase NUDT19", "gene_name": "NUDT19", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75381-1", "protein_name": "Peroxisomal membrane protein PEX14", "gene_name": "PEX14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13608-1", "protein_name": "Peroxisomal ATPase PEX6", "gene_name": "PEX6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28328-1", "protein_name": "Peroxisome biogenesis factor 2", "gene_name": "PEX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43933-1", "protein_name": "Peroxisomal ATPase PEX1", "gene_name": "PEX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99489-1", "protein_name": "D-aspartate oxidase", "gene_name": "DDO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61077-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D3", "gene_name": "UBE2D3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13011-1", "protein_name": "Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial", "gene_name": "ECH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51668-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D1", "gene_name": "UBE2D1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04040-1", "protein_name": "Catalase", "gene_name": "CAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14735-1", "protein_name": "Insulin-degrading enzyme", "gene_name": "IDE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2Q3-1", "protein_name": "Glutathione S-transferase kappa 1", "gene_name": "GSTK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z412-1", "protein_name": "Peroxisome assembly protein 26", "gene_name": "PEX26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P0Z9-1", "protein_name": "Peroxisomal sarcosine oxidase", "gene_name": "PIPOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99424-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 2", "gene_name": "ACOX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15067-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 1", "gene_name": "ACOX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08426-1", "protein_name": "Peroxisomal bifunctional enzyme", "gene_name": "EHHADH", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHK6-1", "protein_name": "Alpha-methylacyl-CoA racemase", "gene_name": "AMACR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35228-1", "protein_name": "Nitric oxide synthase, inducible", "gene_name": "NOS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FIF0-1", "protein_name": "AN1-type zinc finger protein 6", "gene_name": "ZFAND6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2T9J0-1", "protein_name": "Peroxisomal leader peptide-processing protease", "gene_name": "TYSND1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43155-1", "protein_name": "Carnitine O-acetyltransferase", "gene_name": "CRAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62837-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D2", "gene_name": "UBE2D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51659-1", "protein_name": "Peroxisomal multifunctional enzyme type 2", "gene_name": "HSD17B4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJM8-1", "protein_name": "2-Hydroxyacid oxidase 1", "gene_name": "HAO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKG9-1", "protein_name": "Peroxisomal carnitine O-octanoyltransferase", "gene_name": "CROT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6QHF9-2", "protein_name": "Peroxisomal N(1)-acetyl-spermine/spermidine oxidase", "gene_name": "PAOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21549-1", "protein_name": "Alanine--glyoxylate aminotransferase", "gene_name": "AGXT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92968-1", "protein_name": "Peroxisomal membrane protein PEX13", "gene_name": "PEX13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60683-1", "protein_name": "Peroxisome biogenesis factor 10", "gene_name": "PEX10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00623-1", "protein_name": "Peroxisome assembly protein 12", "gene_name": "PEX12", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00628-1", "protein_name": "Peroxisomal targeting signal 2 receptor", "gene_name": "PEX7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BY49-1", "protein_name": "Peroxisomal trans-2-enoyl-CoA reductase", "gene_name": "PECR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ83-1", "protein_name": "2-hydroxyacyl-CoA lyase 1", "gene_name": "HACL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NYQ3-1", "protein_name": "2-Hydroxyacid oxidase 2", "gene_name": "HAO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93008-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 9X", "gene_name": "USP9X", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14975-1", "protein_name": "Long-chain fatty acid transport protein 2", "gene_name": "SLC27A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14032-1", "protein_name": "Bile acid-CoA:amino acid N-acyltransferase", "gene_name": "BAAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09110-1", "protein_name": "3-ketoacyl-CoA thiolase, peroxisomal", "gene_name": "ACAA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NUI1-1", "protein_name": "Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]", "gene_name": "DECR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTZ2-1", "protein_name": "Dehydrogenase/reductase SDR family member 4", "gene_name": "DHRS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75874-1", "protein_name": "Isocitrate dehydrogenase [NADP] cytoplasmic", "gene_name": "IDH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P34913-1", "protein_name": "Bifunctional epoxide hydrolase 2", "gene_name": "EPHX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00116-1", "protein_name": "Alkyldihydroxyacetonephosphate synthase, peroxisomal", "gene_name": "AGPS", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14734-1", "protein_name": "Acyl-coenzyme A thioesterase 8", "gene_name": "ACOT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49753-1", "protein_name": "Acyl-coenzyme A thioesterase 2, mitochondrial", "gene_name": "ACOT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9L9-1", "protein_name": "Peroxisomal succinyl-coenzyme A thioesterase", "gene_name": "ACOT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14920-1", "protein_name": "D-amino-acid oxidase", "gene_name": "DAO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28288-1", "protein_name": "ATP-binding cassette sub-family D member 3", "gene_name": "ABCD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15254-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 3", "gene_name": "ACOX3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q86WA8", "url": "https://www.uniprot.org/uniprotkb/Q86WA8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9539740", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 63 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of a human PTS1 receptor docking protein directly required for peroxisomal protein import.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "1998", "authors": "Fransen M, Terlecky SR, Subramani S", "reference": { "type": "PubMed", "id": "9653144", "url": "https://pubmed.ncbi.nlm.nih.gov/9653144" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": 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"protein_name": "Acyl-coenzyme A diphosphatase NUDT19", "gene_name": "NUDT19", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75381-1", "protein_name": "Peroxisomal membrane protein PEX14", "gene_name": "PEX14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13608-1", "protein_name": "Peroxisomal ATPase PEX6", "gene_name": "PEX6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28328-1", "protein_name": "Peroxisome biogenesis factor 2", "gene_name": "PEX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43933-1", "protein_name": "Peroxisomal ATPase PEX1", "gene_name": "PEX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99489-1", "protein_name": "D-aspartate oxidase", "gene_name": "DDO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61077-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D3", "gene_name": "UBE2D3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13011-1", "protein_name": "Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial", "gene_name": "ECH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51668-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D1", "gene_name": "UBE2D1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04040-1", "protein_name": "Catalase", "gene_name": "CAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14735-1", "protein_name": "Insulin-degrading enzyme", "gene_name": "IDE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2Q3-1", "protein_name": "Glutathione S-transferase kappa 1", "gene_name": "GSTK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z412-1", "protein_name": "Peroxisome assembly protein 26", "gene_name": "PEX26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P0Z9-1", "protein_name": "Peroxisomal sarcosine oxidase", "gene_name": "PIPOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99424-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 2", "gene_name": "ACOX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15067-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 1", "gene_name": "ACOX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08426-1", "protein_name": "Peroxisomal bifunctional enzyme", "gene_name": "EHHADH", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHK6-1", "protein_name": "Alpha-methylacyl-CoA racemase", "gene_name": "AMACR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35228-1", "protein_name": "Nitric oxide synthase, inducible", "gene_name": "NOS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FIF0-1", "protein_name": "AN1-type zinc finger protein 6", "gene_name": "ZFAND6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2T9J0-1", "protein_name": "Peroxisomal leader peptide-processing protease", "gene_name": "TYSND1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43155-1", "protein_name": "Carnitine O-acetyltransferase", "gene_name": "CRAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62837-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D2", "gene_name": "UBE2D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51659-1", "protein_name": "Peroxisomal multifunctional enzyme type 2", "gene_name": "HSD17B4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJM8-1", "protein_name": "2-Hydroxyacid oxidase 1", "gene_name": "HAO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKG9-1", "protein_name": "Peroxisomal carnitine O-octanoyltransferase", "gene_name": "CROT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6QHF9-2", "protein_name": "Peroxisomal N(1)-acetyl-spermine/spermidine oxidase", "gene_name": "PAOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21549-1", "protein_name": "Alanine--glyoxylate aminotransferase", "gene_name": "AGXT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92968-1", "protein_name": "Peroxisomal membrane protein PEX13", "gene_name": "PEX13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60683-1", "protein_name": "Peroxisome biogenesis factor 10", "gene_name": "PEX10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00623-1", "protein_name": "Peroxisome assembly protein 12", "gene_name": "PEX12", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00628-1", "protein_name": "Peroxisomal targeting signal 2 receptor", "gene_name": "PEX7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BY49-1", "protein_name": "Peroxisomal trans-2-enoyl-CoA reductase", "gene_name": "PECR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ83-1", "protein_name": "2-hydroxyacyl-CoA lyase 1", "gene_name": "HACL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NYQ3-1", "protein_name": "2-Hydroxyacid oxidase 2", "gene_name": "HAO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93008-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 9X", "gene_name": "USP9X", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14975-1", "protein_name": "Long-chain fatty acid transport protein 2", "gene_name": "SLC27A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14032-1", "protein_name": "Bile acid-CoA:amino acid N-acyltransferase", "gene_name": "BAAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09110-1", "protein_name": "3-ketoacyl-CoA thiolase, peroxisomal", "gene_name": "ACAA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NUI1-1", "protein_name": "Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]", "gene_name": "DECR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTZ2-1", "protein_name": "Dehydrogenase/reductase SDR family member 4", "gene_name": "DHRS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75874-1", "protein_name": "Isocitrate dehydrogenase [NADP] cytoplasmic", "gene_name": "IDH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P34913-1", "protein_name": "Bifunctional epoxide hydrolase 2", "gene_name": "EPHX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00116-1", "protein_name": "Alkyldihydroxyacetonephosphate synthase, peroxisomal", "gene_name": "AGPS", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14734-1", "protein_name": "Acyl-coenzyme A thioesterase 8", "gene_name": "ACOT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49753-1", "protein_name": "Acyl-coenzyme A thioesterase 2, mitochondrial", "gene_name": "ACOT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9L9-1", "protein_name": "Peroxisomal succinyl-coenzyme A thioesterase", "gene_name": "ACOT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14920-1", "protein_name": "D-amino-acid oxidase", "gene_name": "DAO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15254-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 3", "gene_name": "ACOX3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q86WA8", "url": "https://www.uniprot.org/uniprotkb/Q86WA8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9653144", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 60 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "An isoform of pex5p, the human PTS1 receptor, is required for the import of PTS2 proteins into peroxisomes.", "journal": "Human molecular genetics", "date": "1998", "authors": "Braverman N, Dodt G, Gould SJ, Valle D", "reference": { "type": "PubMed", "id": "9668159", "url": "https://pubmed.ncbi.nlm.nih.gov/9668159" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q86WA8-1", "protein_name": "Lon protease homolog 2, peroxisomal", "gene_name": "LONP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C024-1", "protein_name": "Peroxisomal coenzyme A diphosphatase NUDT7", "gene_name": "NUDT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14832-1", "protein_name": "Phytanoyl-CoA dioxygenase, peroxisomal", "gene_name": "PHYH", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15228-1", "protein_name": "Dihydroxyacetone phosphate acyltransferase", "gene_name": "GNPAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P39210-1", "protein_name": "Mitochondrial inner membrane protein Mpv17", "gene_name": "MPV17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22307-1", "protein_name": "Sterol carrier protein 2", "gene_name": "SCP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35914-1", "protein_name": "Hydroxymethylglutaryl-CoA lyase, mitochondrial", "gene_name": "HMGCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8MXV4-1", "protein_name": "Acyl-coenzyme A diphosphatase NUDT19", "gene_name": "NUDT19", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75381-1", "protein_name": "Peroxisomal membrane protein PEX14", "gene_name": "PEX14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13608-1", "protein_name": "Peroxisomal ATPase PEX6", "gene_name": "PEX6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28328-1", "protein_name": "Peroxisome biogenesis factor 2", "gene_name": "PEX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43933-1", "protein_name": "Peroxisomal ATPase PEX1", "gene_name": "PEX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99489-1", "protein_name": "D-aspartate oxidase", "gene_name": "DDO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61077-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D3", "gene_name": "UBE2D3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13011-1", "protein_name": "Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial", "gene_name": "ECH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51668-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D1", "gene_name": "UBE2D1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04040-1", "protein_name": "Catalase", "gene_name": "CAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14735-1", "protein_name": "Insulin-degrading enzyme", "gene_name": "IDE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2Q3-1", "protein_name": "Glutathione S-transferase kappa 1", "gene_name": "GSTK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z412-1", "protein_name": "Peroxisome assembly protein 26", "gene_name": "PEX26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P0Z9-1", "protein_name": "Peroxisomal sarcosine oxidase", "gene_name": "PIPOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99424-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 2", "gene_name": "ACOX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15067-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 1", "gene_name": "ACOX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08426-1", "protein_name": "Peroxisomal bifunctional enzyme", "gene_name": "EHHADH", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHK6-1", "protein_name": "Alpha-methylacyl-CoA racemase", "gene_name": "AMACR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35228-1", "protein_name": "Nitric oxide synthase, inducible", "gene_name": "NOS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FIF0-1", "protein_name": "AN1-type zinc finger protein 6", "gene_name": "ZFAND6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2T9J0-1", "protein_name": "Peroxisomal leader peptide-processing protease", "gene_name": "TYSND1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43155-1", "protein_name": "Carnitine O-acetyltransferase", "gene_name": "CRAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62837-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D2", "gene_name": "UBE2D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51659-1", "protein_name": "Peroxisomal multifunctional enzyme type 2", "gene_name": "HSD17B4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJM8-1", "protein_name": "2-Hydroxyacid oxidase 1", "gene_name": "HAO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKG9-1", "protein_name": "Peroxisomal carnitine O-octanoyltransferase", "gene_name": "CROT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6QHF9-2", "protein_name": "Peroxisomal N(1)-acetyl-spermine/spermidine oxidase", "gene_name": "PAOX", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21549-1", "protein_name": "Alanine--glyoxylate aminotransferase", "gene_name": "AGXT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92968-1", "protein_name": "Peroxisomal membrane protein PEX13", "gene_name": "PEX13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60683-1", "protein_name": "Peroxisome biogenesis factor 10", "gene_name": "PEX10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00623-1", "protein_name": "Peroxisome assembly protein 12", "gene_name": "PEX12", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00628-1", "protein_name": "Peroxisomal targeting signal 2 receptor", "gene_name": "PEX7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BY49-1", "protein_name": "Peroxisomal trans-2-enoyl-CoA reductase", "gene_name": "PECR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ83-1", "protein_name": "2-hydroxyacyl-CoA lyase 1", "gene_name": "HACL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NYQ3-1", "protein_name": "2-Hydroxyacid oxidase 2", "gene_name": "HAO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93008-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 9X", "gene_name": "USP9X", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14975-1", "protein_name": "Long-chain fatty acid transport protein 2", "gene_name": "SLC27A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14032-1", "protein_name": "Bile acid-CoA:amino acid N-acyltransferase", "gene_name": "BAAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09110-1", "protein_name": "3-ketoacyl-CoA thiolase, peroxisomal", "gene_name": "ACAA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NUI1-1", "protein_name": "Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]", "gene_name": "DECR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTZ2-1", "protein_name": "Dehydrogenase/reductase SDR family member 4", "gene_name": "DHRS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75874-1", "protein_name": "Isocitrate dehydrogenase [NADP] cytoplasmic", "gene_name": "IDH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P34913-1", "protein_name": "Bifunctional 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"Human" }, { "uniprot_canonical_ac": "Q9Y2T2-1", "protein_name": "AP-3 complex subunit mu-1", "gene_name": "AP3M1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUR4-1", "protein_name": "Telomerase Cajal body protein 1", "gene_name": "WRAP53", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKT7-1", "protein_name": "F-box/LRR-repeat protein 3", "gene_name": "FBXL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57775-1", "protein_name": "F-box/WD repeat-containing protein 4", "gene_name": "FBXW4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40763-1", "protein_name": "Signal transducer and activator of transcription 3", "gene_name": "STAT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q969U6-1", "protein_name": "F-box/WD repeat-containing protein 5", "gene_name": "FBXW5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6D5-1", "protein_name": "Brefeldin A-inhibited guanine nucleotide-exchange protein 2", "gene_name": "ARFGEF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24864-1", "protein_name": "G1/S-specific cyclin-E1", "gene_name": "CCNE1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51784-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 11", "gene_name": "USP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78371-1", "protein_name": "T-complex protein 1 subunit beta", "gene_name": "CCT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0D6-1", "protein_name": "5'-3' exoribonuclease 2", "gene_name": "XRN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48643-1", "protein_name": "T-complex protein 1 subunit epsilon", "gene_name": "CCT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "O96020-1", "protein_name": "G1/S-specific cyclin-E2", "gene_name": "CCNE2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKT8-1", "protein_name": "F-box/WD repeat-containing protein 2", "gene_name": "FBXW2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50990-1", "protein_name": "T-complex protein 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adjacent to it.", "journal": "The Journal of biological chemistry", "date": "1998", "authors": "Lametschwandtner G, Brocard C, Fransen M, Van Veldhoven P, Berger J, Hartig A", "reference": { "type": "PubMed", "id": "9837948", "url": "https://pubmed.ncbi.nlm.nih.gov/9837948" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q86WA8-1", "protein_name": "Lon protease homolog 2, peroxisomal", "gene_name": "LONP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C024-1", "protein_name": "Peroxisomal coenzyme A diphosphatase NUDT7", "gene_name": "NUDT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14832-1", "protein_name": "Phytanoyl-CoA dioxygenase, peroxisomal", "gene_name": "PHYH", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15228-1", "protein_name": "Dihydroxyacetone phosphate acyltransferase", "gene_name": "GNPAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P39210-1", "protein_name": "Mitochondrial inner membrane protein Mpv17", 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"LXRs control lipid-inducible expression of the apolipoprotein E gene in macrophages and adipocytes.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2001", "authors": "Laffitte BA, Repa JJ, Joseph SB, Wilpitz DC, Kast HR, Mangelsdorf DJ, Tontonoz P", "reference": { "type": "PubMed", "id": "11149950", "url": "https://pubmed.ncbi.nlm.nih.gov/11149950" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q7L9B9-1", "protein_name": "Endonuclease/exonuclease/phosphatase family domain-containing protein 1", "gene_name": "EEPD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCK5-1", "protein_name": "Protein argonaute-4", "gene_name": "AGO4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL18-1", "protein_name": "Protein argonaute-1", "gene_name": "AGO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPQ9-3", "protein_name": "Trinucleotide repeat-containing gene 6B protein", "gene_name": 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"uniprot_canonical_ac": "O60907-1", "protein_name": "F-box-like/WD repeat-containing protein TBL1X", "gene_name": "TBL1X", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BZK7-1", "protein_name": "F-box-like/WD repeat-containing protein TBL1XR1", "gene_name": "TBL1XR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02649-1", "protein_name": "Apolipoprotein E", "gene_name": "APOE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13227-1", "protein_name": "G protein pathway suppressor 2", "gene_name": "GPS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28702-1", "protein_name": "Retinoic acid receptor RXR-beta", "gene_name": "RXRB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11597-1", "protein_name": "Cholesteryl ester transfer protein", "gene_name": "CETP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4C1-1", "protein_name": "Lysine-specific demethylase 3A", "gene_name": "KDM3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13133-1", 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"uniprot_canonical_ac": "Q9H9G7-1", "protein_name": "Protein argonaute-3", "gene_name": "AGO3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NDV7-1", "protein_name": "Trinucleotide repeat-containing gene 6A protein", "gene_name": "TNRC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCE1-1", "protein_name": "RNA helicase MOV-10", "gene_name": "MOV10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75164-1", "protein_name": "Lysine-specific demethylase 4A", "gene_name": "KDM4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75376-1", "protein_name": "Nuclear receptor corepressor 1", "gene_name": "NCOR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15788-1", "protein_name": "Nuclear receptor coactivator 1", "gene_name": "NCOA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95477-1", "protein_name": "Phospholipid-transporting ATPase ABCA1", "gene_name": "ABCA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45844-1", "protein_name": "ATP-binding 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"n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Characterization of the human ABCG1 gene: liver X receptor activates an internal promoter that produces a novel transcript encoding an alternative form of the protein.", "journal": "The Journal of biological chemistry", "date": "2001", "authors": "Kennedy MA, Venkateswaran A, Tarr PT, Xenarios I, Kudoh J, Shimizu N, Edwards PA", "reference": { "type": "PubMed", "id": "11500512", "url": "https://pubmed.ncbi.nlm.nih.gov/11500512" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q7L9B9-1", "protein_name": 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"tax_name": "Human" }, { "uniprot_canonical_ac": "P28702-1", "protein_name": "Retinoic acid receptor RXR-beta", "gene_name": "RXRB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11597-1", "protein_name": "Cholesteryl ester transfer protein", "gene_name": "CETP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4C1-1", "protein_name": "Lysine-specific demethylase 3A", "gene_name": "KDM3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13133-1", "protein_name": "Oxysterols receptor LXR-alpha", "gene_name": "NR1H3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15379-1", "protein_name": "Histone deacetylase 3", "gene_name": "HDAC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55055-1", "protein_name": "Oxysterols receptor LXR-beta", "gene_name": "NR1H2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60341-1", "protein_name": "Lysine-specific histone demethylase 1A", "gene_name": "KDM1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKV8-1", "protein_name": "Protein argonaute-2", "gene_name": "AGO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05090-1", "protein_name": "Apolipoprotein D", "gene_name": "APOD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09472-1", "protein_name": "Histone acetyltransferase p300", "gene_name": "EP300", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55056-1", "protein_name": "Apolipoprotein C-IV", "gene_name": "APOC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9G7-1", "protein_name": "Protein argonaute-3", "gene_name": "AGO3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NDV7-1", "protein_name": "Trinucleotide repeat-containing gene 6A protein", "gene_name": "TNRC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCE1-1", "protein_name": "RNA helicase MOV-10", "gene_name": "MOV10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75164-1", "protein_name": "Lysine-specific demethylase 4A", "gene_name": "KDM4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75376-1", "protein_name": "Nuclear receptor corepressor 1", "gene_name": "NCOR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15788-1", "protein_name": "Nuclear receptor coactivator 1", "gene_name": "NCOA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95477-1", "protein_name": "Phospholipid-transporting ATPase ABCA1", "gene_name": "ABCA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45844-1", "protein_name": "ATP-binding cassette sub-family G member 1", "gene_name": "ABCG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H221-1", "protein_name": "ATP-binding cassette sub-family G member 8", "gene_name": "ABCG8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H222-1", "protein_name": "ATP-binding cassette sub-family G member 5", "gene_name": "ABCG5", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q7L9B9", "url": "https://www.uniprot.org/uniprotkb/Q7L9B9" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11500512", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 36 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Autoregulation of the human liver X receptor alpha promoter.", "journal": "Molecular and cellular biology", "date": "2001", "authors": "Laffitte BA, Joseph SB, Walczak R, Pei L, Wilpitz DC, Collins JL, Tontonoz P", "reference": { "type": "PubMed", "id": "11604492", "url": "https://pubmed.ncbi.nlm.nih.gov/11604492" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q7L9B9-1", "protein_name": "Endonuclease/exonuclease/phosphatase family domain-containing protein 1", "gene_name": "EEPD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCK5-1", "protein_name": "Protein argonaute-4", "gene_name": "AGO4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL18-1", "protein_name": "Protein argonaute-1", "gene_name": "AGO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPQ9-3", "protein_name": "Trinucleotide repeat-containing gene 6B protein", "gene_name": "TNRC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCJ0-3", "protein_name": "Trinucleotide repeat-containing gene 6C protein", "gene_name": "TNRC6C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y618-1", "protein_name": "Nuclear receptor corepressor 2", "gene_name": "NCOR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02655-1", "protein_name": "Apolipoprotein C-II", "gene_name": "APOC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56559-1", "protein_name": "ADP-ribosylation factor-like protein 4C", "gene_name": "ARL4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02654-1", "protein_name": "Apolipoprotein C-I", "gene_name": "APOC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NB78-1", "protein_name": "Lysine-specific histone demethylase 2", "gene_name": "KDM1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19793-1", "protein_name": "Retinoic acid receptor RXR-alpha", "gene_name": "RXRA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60907-1", "protein_name": "F-box-like/WD repeat-containing protein TBL1X", "gene_name": "TBL1X", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BZK7-1", "protein_name": "F-box-like/WD repeat-containing protein TBL1XR1", "gene_name": "TBL1XR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02649-1", "protein_name": "Apolipoprotein E", "gene_name": "APOE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13227-1", "protein_name": "G protein pathway suppressor 2", "gene_name": "GPS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28702-1", "protein_name": "Retinoic acid receptor RXR-beta", "gene_name": "RXRB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11597-1", "protein_name": "Cholesteryl ester transfer protein", "gene_name": "CETP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4C1-1", "protein_name": "Lysine-specific demethylase 3A", "gene_name": "KDM3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13133-1", "protein_name": "Oxysterols receptor LXR-alpha", "gene_name": "NR1H3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15379-1", "protein_name": "Histone deacetylase 3", "gene_name": "HDAC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55055-1", "protein_name": "Oxysterols receptor LXR-beta", "gene_name": "NR1H2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60341-1", "protein_name": "Lysine-specific histone demethylase 1A", "gene_name": "KDM1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKV8-1", "protein_name": "Protein argonaute-2", "gene_name": "AGO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05090-1", "protein_name": "Apolipoprotein D", "gene_name": "APOD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09472-1", "protein_name": "Histone acetyltransferase p300", "gene_name": "EP300", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55056-1", "protein_name": "Apolipoprotein C-IV", "gene_name": "APOC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9G7-1", "protein_name": "Protein argonaute-3", "gene_name": "AGO3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NDV7-1", "protein_name": "Trinucleotide repeat-containing gene 6A protein", "gene_name": "TNRC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCE1-1", "protein_name": "RNA helicase MOV-10", "gene_name": "MOV10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75164-1", "protein_name": "Lysine-specific demethylase 4A", "gene_name": "KDM4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75376-1", "protein_name": "Nuclear receptor corepressor 1", "gene_name": "NCOR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15788-1", "protein_name": "Nuclear receptor coactivator 1", "gene_name": "NCOA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95477-1", "protein_name": "Phospholipid-transporting ATPase ABCA1", "gene_name": "ABCA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45844-1", "protein_name": "ATP-binding cassette sub-family G member 1", "gene_name": "ABCG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H221-1", "protein_name": "ATP-binding cassette sub-family G member 8", "gene_name": "ABCG8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H222-1", "protein_name": "ATP-binding cassette sub-family G member 5", "gene_name": "ABCG5", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q7L9B9", "url": "https://www.uniprot.org/uniprotkb/Q7L9B9" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11604492", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 36 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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"uniprot_canonical_ac": "O95477-1", "protein_name": "Phospholipid-transporting ATPase ABCA1", "gene_name": "ABCA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45844-1", "protein_name": "ATP-binding cassette sub-family G member 1", "gene_name": "ABCG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H221-1", "protein_name": "ATP-binding cassette sub-family G member 8", "gene_name": "ABCG8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H222-1", "protein_name": "ATP-binding cassette sub-family G member 5", "gene_name": "ABCG5", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q7L9B9", "url": "https://www.uniprot.org/uniprotkb/Q7L9B9" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11875109", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 36 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": 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"field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Regulated expression of the apolipoprotein E/C-I/C-IV/C-II gene cluster in murine and human macrophages. A critical role for nuclear liver X receptors alpha and beta.", "journal": "The Journal of biological chemistry", "date": "2002", "authors": "Mak PA, Laffitte BA, Desrumaux C, Joseph SB, Curtiss LK, Mangelsdorf DJ, Tontonoz P, Edwards PA", "reference": { "type": "PubMed", "id": "12032151", "url": "https://pubmed.ncbi.nlm.nih.gov/12032151" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q7L9B9-1", "protein_name": "Endonuclease/exonuclease/phosphatase family domain-containing protein 1", "gene_name": "EEPD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCK5-1", "protein_name": "Protein argonaute-4", "gene_name": "AGO4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL18-1", "protein_name": "Protein argonaute-1", "gene_name": "AGO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPQ9-3", "protein_name": "Trinucleotide repeat-containing gene 6B protein", "gene_name": "TNRC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCJ0-3", "protein_name": "Trinucleotide repeat-containing gene 6C protein", "gene_name": "TNRC6C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y618-1", "protein_name": "Nuclear receptor corepressor 2", "gene_name": "NCOR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02655-1", "protein_name": "Apolipoprotein C-II", "gene_name": "APOC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56559-1", "protein_name": "ADP-ribosylation factor-like protein 4C", "gene_name": "ARL4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02654-1", "protein_name": "Apolipoprotein C-I", "gene_name": "APOC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q61268-1", "protein_name": "Apolipoprotein C-IV", "gene_name": "Apoc4", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8NB78-1", "protein_name": "Lysine-specific histone demethylase 2", "gene_name": "KDM1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19793-1", "protein_name": "Retinoic acid receptor RXR-alpha", "gene_name": "RXRA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60907-1", "protein_name": "F-box-like/WD repeat-containing protein TBL1X", "gene_name": "TBL1X", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BZK7-1", "protein_name": "F-box-like/WD repeat-containing protein TBL1XR1", "gene_name": "TBL1XR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02649-1", "protein_name": "Apolipoprotein E", "gene_name": "APOE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13227-1", "protein_name": "G protein pathway suppressor 2", "gene_name": "GPS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28702-1", "protein_name": "Retinoic acid receptor RXR-beta", "gene_name": "RXRB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11597-1", "protein_name": "Cholesteryl ester transfer protein", "gene_name": "CETP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4C1-1", "protein_name": "Lysine-specific demethylase 3A", "gene_name": "KDM3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13133-1", "protein_name": "Oxysterols receptor LXR-alpha", "gene_name": "NR1H3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15379-1", "protein_name": "Histone deacetylase 3", "gene_name": "HDAC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55055-1", "protein_name": "Oxysterols receptor LXR-beta", "gene_name": "NR1H2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60341-1", "protein_name": "Lysine-specific histone demethylase 1A", "gene_name": "KDM1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKV8-1", "protein_name": "Protein argonaute-2", "gene_name": "AGO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05090-1", "protein_name": "Apolipoprotein D", "gene_name": "APOD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09472-1", "protein_name": "Histone acetyltransferase p300", "gene_name": "EP300", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55056-1", "protein_name": "Apolipoprotein C-IV", "gene_name": "APOC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9G7-1", "protein_name": "Protein argonaute-3", "gene_name": "AGO3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NDV7-1", "protein_name": "Trinucleotide repeat-containing gene 6A protein", "gene_name": "TNRC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCE1-1", "protein_name": "RNA helicase MOV-10", "gene_name": "MOV10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75164-1", "protein_name": "Lysine-specific demethylase 4A", "gene_name": "KDM4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75376-1", "protein_name": "Nuclear receptor corepressor 1", "gene_name": "NCOR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15788-1", "protein_name": "Nuclear receptor coactivator 1", "gene_name": "NCOA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95477-1", "protein_name": "Phospholipid-transporting ATPase ABCA1", "gene_name": "ABCA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45844-1", "protein_name": "ATP-binding cassette sub-family G member 1", "gene_name": "ABCG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H221-1", "protein_name": "ATP-binding cassette sub-family G member 8", "gene_name": "ABCG8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H222-1", "protein_name": "ATP-binding cassette sub-family G member 5", "gene_name": "ABCG5", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q7L9B9", "url": "https://www.uniprot.org/uniprotkb/Q7L9B9" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12032151", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 37 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { 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"tax_name": "Human" }, { "uniprot_canonical_ac": "P28702-1", "protein_name": "Retinoic acid receptor RXR-beta", "gene_name": "RXRB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11597-1", "protein_name": "Cholesteryl ester transfer protein", "gene_name": "CETP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4C1-1", "protein_name": "Lysine-specific demethylase 3A", "gene_name": "KDM3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13133-1", "protein_name": "Oxysterols receptor LXR-alpha", "gene_name": "NR1H3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15379-1", "protein_name": "Histone deacetylase 3", "gene_name": "HDAC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55055-1", "protein_name": "Oxysterols receptor LXR-beta", "gene_name": "NR1H2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60341-1", "protein_name": "Lysine-specific histone demethylase 1A", "gene_name": "KDM1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKV8-1", "protein_name": "Protein argonaute-2", "gene_name": "AGO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05090-1", "protein_name": "Apolipoprotein D", "gene_name": "APOD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09472-1", "protein_name": "Histone acetyltransferase p300", "gene_name": "EP300", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55056-1", "protein_name": "Apolipoprotein C-IV", "gene_name": "APOC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9G7-1", "protein_name": "Protein argonaute-3", "gene_name": "AGO3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NDV7-1", "protein_name": "Trinucleotide repeat-containing gene 6A protein", "gene_name": "TNRC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCE1-1", "protein_name": "RNA helicase MOV-10", "gene_name": "MOV10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75164-1", "protein_name": "Lysine-specific demethylase 4A", "gene_name": "KDM4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75376-1", "protein_name": "Nuclear receptor corepressor 1", "gene_name": "NCOR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15788-1", "protein_name": "Nuclear receptor coactivator 1", "gene_name": "NCOA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95477-1", "protein_name": "Phospholipid-transporting ATPase ABCA1", "gene_name": "ABCA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45844-1", "protein_name": "ATP-binding cassette sub-family G member 1", "gene_name": "ABCG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H221-1", "protein_name": "ATP-binding cassette sub-family G member 8", "gene_name": "ABCG8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H222-1", "protein_name": "ATP-binding cassette sub-family G member 5", "gene_name": "ABCG5", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q7L9B9", "url": "https://www.uniprot.org/uniprotkb/Q7L9B9" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12150943", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 36 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of PLTP as an LXR target gene and apoE as an FXR target gene reveals overlapping targets for the two nuclear receptors.", "journal": "Journal of lipid research", "date": "2002", "authors": "Mak PA, Kast-Woelbern HR, Anisfeld AM, Edwards PA", "reference": { "type": "PubMed", "id": "12454263", "url": "https://pubmed.ncbi.nlm.nih.gov/12454263" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q7L9B9-1", "protein_name": "Endonuclease/exonuclease/phosphatase family domain-containing protein 1", "gene_name": "EEPD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCK5-1", "protein_name": "Protein argonaute-4", "gene_name": "AGO4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL18-1", "protein_name": "Protein argonaute-1", "gene_name": "AGO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPQ9-3", "protein_name": "Trinucleotide repeat-containing gene 6B protein", "gene_name": "TNRC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCJ0-3", "protein_name": "Trinucleotide repeat-containing gene 6C protein", "gene_name": "TNRC6C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y618-1", "protein_name": "Nuclear receptor corepressor 2", "gene_name": "NCOR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02655-1", "protein_name": "Apolipoprotein C-II", "gene_name": "APOC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56559-1", "protein_name": "ADP-ribosylation factor-like protein 4C", "gene_name": "ARL4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02654-1", "protein_name": "Apolipoprotein C-I", "gene_name": "APOC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NB78-1", "protein_name": "Lysine-specific histone demethylase 2", "gene_name": "KDM1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19793-1", "protein_name": "Retinoic acid receptor RXR-alpha", "gene_name": "RXRA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60907-1", "protein_name": "F-box-like/WD repeat-containing protein TBL1X", "gene_name": "TBL1X", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BZK7-1", "protein_name": "F-box-like/WD repeat-containing protein TBL1XR1", "gene_name": "TBL1XR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02649-1", "protein_name": "Apolipoprotein E", "gene_name": "APOE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13227-1", "protein_name": "G protein pathway suppressor 2", "gene_name": "GPS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28702-1", "protein_name": "Retinoic acid receptor RXR-beta", "gene_name": "RXRB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11597-1", "protein_name": "Cholesteryl ester transfer protein", "gene_name": "CETP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4C1-1", "protein_name": "Lysine-specific demethylase 3A", "gene_name": "KDM3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13133-1", "protein_name": "Oxysterols receptor LXR-alpha", "gene_name": "NR1H3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15379-1", "protein_name": "Histone deacetylase 3", "gene_name": "HDAC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55055-1", "protein_name": "Oxysterols receptor LXR-beta", "gene_name": "NR1H2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60341-1", "protein_name": "Lysine-specific histone demethylase 1A", "gene_name": "KDM1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKV8-1", "protein_name": "Protein argonaute-2", "gene_name": "AGO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05090-1", "protein_name": "Apolipoprotein D", "gene_name": "APOD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09472-1", "protein_name": "Histone acetyltransferase p300", "gene_name": "EP300", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55056-1", "protein_name": "Apolipoprotein C-IV", "gene_name": "APOC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9G7-1", "protein_name": "Protein argonaute-3", "gene_name": "AGO3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NDV7-1", "protein_name": "Trinucleotide repeat-containing gene 6A protein", "gene_name": "TNRC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCE1-1", "protein_name": "RNA helicase MOV-10", "gene_name": "MOV10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75164-1", "protein_name": "Lysine-specific demethylase 4A", "gene_name": "KDM4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75376-1", "protein_name": "Nuclear receptor corepressor 1", "gene_name": "NCOR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15788-1", "protein_name": "Nuclear receptor coactivator 1", "gene_name": "NCOA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95477-1", "protein_name": "Phospholipid-transporting ATPase ABCA1", "gene_name": "ABCA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45844-1", "protein_name": "ATP-binding cassette sub-family G member 1", "gene_name": "ABCG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H221-1", "protein_name": "ATP-binding cassette sub-family G member 8", "gene_name": "ABCG8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H222-1", "protein_name": "ATP-binding cassette sub-family G member 5", "gene_name": "ABCG5", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q7L9B9", "url": "https://www.uniprot.org/uniprotkb/Q7L9B9" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12454263", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 36 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The phospholipid transfer protein gene is a liver X receptor target expressed by macrophages in atherosclerotic lesions.", "journal": "Molecular and cellular biology", "date": "2003", "authors": "Laffitte BA, Joseph SB, Chen M, Castrillo A, Repa J, Wilpitz D, Mangelsdorf D, Tontonoz P", "reference": { "type": "PubMed", "id": "12612088", "url": "https://pubmed.ncbi.nlm.nih.gov/12612088" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q7L9B9-1", "protein_name": "Endonuclease/exonuclease/phosphatase family domain-containing protein 1", "gene_name": "EEPD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCK5-1", "protein_name": 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"field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Direct interaction of nuclear liver X receptor-beta with ABCA1 modulates cholesterol efflux.", "journal": "The Journal of biological chemistry", "date": "2008", "authors": "Hozoji M, Munehira Y, Ikeda Y, Makishima M, Matsuo M, Kioka N, Ueda K", "reference": { "type": "PubMed", "id": "18782758", "url": "https://pubmed.ncbi.nlm.nih.gov/18782758" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q7L9B9-1", "protein_name": "Endonuclease/exonuclease/phosphatase family domain-containing protein 1", "gene_name": "EEPD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCK5-1", "protein_name": "Protein argonaute-4", "gene_name": "AGO4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL18-1", "protein_name": "Protein argonaute-1", "gene_name": "AGO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPQ9-3", "protein_name": "Trinucleotide repeat-containing gene 6B protein", "gene_name": "TNRC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCJ0-3", "protein_name": "Trinucleotide repeat-containing gene 6C protein", "gene_name": "TNRC6C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y618-1", "protein_name": "Nuclear receptor corepressor 2", "gene_name": "NCOR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02655-1", "protein_name": "Apolipoprotein C-II", "gene_name": "APOC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56559-1", "protein_name": "ADP-ribosylation factor-like protein 4C", "gene_name": "ARL4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02654-1", "protein_name": "Apolipoprotein C-I", "gene_name": "APOC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NB78-1", "protein_name": "Lysine-specific histone demethylase 2", "gene_name": "KDM1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19793-1", "protein_name": "Retinoic acid receptor RXR-alpha", "gene_name": "RXRA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60907-1", "protein_name": "F-box-like/WD repeat-containing protein TBL1X", "gene_name": "TBL1X", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BZK7-1", "protein_name": "F-box-like/WD repeat-containing protein TBL1XR1", "gene_name": "TBL1XR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02649-1", "protein_name": "Apolipoprotein E", "gene_name": "APOE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13227-1", "protein_name": "G protein pathway suppressor 2", "gene_name": "GPS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28702-1", "protein_name": "Retinoic acid receptor RXR-beta", "gene_name": "RXRB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11597-1", "protein_name": "Cholesteryl ester transfer protein", "gene_name": "CETP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4C1-1", "protein_name": "Lysine-specific demethylase 3A", "gene_name": "KDM3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13133-1", "protein_name": "Oxysterols receptor LXR-alpha", "gene_name": "NR1H3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15379-1", "protein_name": "Histone deacetylase 3", "gene_name": "HDAC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55055-1", "protein_name": "Oxysterols receptor LXR-beta", "gene_name": "NR1H2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60341-1", "protein_name": "Lysine-specific histone demethylase 1A", "gene_name": "KDM1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKV8-1", "protein_name": "Protein argonaute-2", "gene_name": "AGO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05090-1", "protein_name": "Apolipoprotein D", "gene_name": "APOD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09472-1", "protein_name": "Histone acetyltransferase p300", "gene_name": "EP300", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55056-1", "protein_name": "Apolipoprotein C-IV", "gene_name": "APOC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9G7-1", "protein_name": "Protein argonaute-3", "gene_name": "AGO3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NDV7-1", "protein_name": "Trinucleotide repeat-containing gene 6A protein", "gene_name": "TNRC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCE1-1", "protein_name": "RNA helicase MOV-10", "gene_name": "MOV10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75164-1", "protein_name": "Lysine-specific demethylase 4A", "gene_name": "KDM4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75376-1", "protein_name": "Nuclear receptor corepressor 1", "gene_name": "NCOR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15788-1", "protein_name": "Nuclear receptor coactivator 1", "gene_name": "NCOA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95477-1", "protein_name": "Phospholipid-transporting ATPase ABCA1", "gene_name": "ABCA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45844-1", "protein_name": "ATP-binding cassette sub-family G member 1", "gene_name": "ABCG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H221-1", "protein_name": "ATP-binding cassette sub-family G member 8", "gene_name": "ABCG8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H222-1", "protein_name": "ATP-binding cassette sub-family G member 5", "gene_name": "ABCG5", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q7L9B9", "url": "https://www.uniprot.org/uniprotkb/Q7L9B9" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.18782758", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 36 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "GPS2 is required for cholesterol efflux by triggering histone demethylation, LXR recruitment, and coregulator assembly at the ABCG1 locus.", "journal": "Molecular cell", "date": "2009", "authors": "Jakobsson T, Venteclef N, Toresson G, Damdimopoulos AE, Ehrlund A, Lou X, Sanyal S, Steffensen KR, Gustafsson JA, Treuter E", "reference": { "type": "PubMed", "id": "19481530", "url": "https://pubmed.ncbi.nlm.nih.gov/19481530" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q7L9B9-1", "protein_name": "Endonuclease/exonuclease/phosphatase family domain-containing protein 1", "gene_name": "EEPD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCK5-1", "protein_name": "Protein argonaute-4", "gene_name": "AGO4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15596-1", "protein_name": "Nuclear receptor coactivator 2", "gene_name": "NCOA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL18-1", "protein_name": "Protein argonaute-1", "gene_name": "AGO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPQ9-3", "protein_name": "Trinucleotide repeat-containing gene 6B protein", "gene_name": "TNRC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCJ0-3", "protein_name": "Trinucleotide repeat-containing gene 6C protein", "gene_name": "TNRC6C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y618-1", "protein_name": "Nuclear receptor corepressor 2", "gene_name": "NCOR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02655-1", "protein_name": "Apolipoprotein C-II", "gene_name": "APOC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56559-1", "protein_name": "ADP-ribosylation factor-like protein 4C", "gene_name": "ARL4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02654-1", "protein_name": "Apolipoprotein C-I", "gene_name": "APOC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NB78-1", "protein_name": "Lysine-specific histone demethylase 2", "gene_name": "KDM1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19793-1", "protein_name": "Retinoic acid receptor RXR-alpha", "gene_name": "RXRA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60907-1", "protein_name": "F-box-like/WD repeat-containing protein TBL1X", "gene_name": "TBL1X", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BZK7-1", "protein_name": "F-box-like/WD repeat-containing protein TBL1XR1", "gene_name": "TBL1XR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02649-1", "protein_name": "Apolipoprotein E", "gene_name": "APOE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13227-1", "protein_name": "G protein pathway suppressor 2", "gene_name": "GPS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28702-1", "protein_name": "Retinoic acid receptor RXR-beta", "gene_name": "RXRB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11597-1", "protein_name": "Cholesteryl ester transfer protein", "gene_name": "CETP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4C1-1", "protein_name": "Lysine-specific demethylase 3A", "gene_name": "KDM3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13133-1", "protein_name": "Oxysterols receptor LXR-alpha", "gene_name": "NR1H3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15379-1", "protein_name": "Histone deacetylase 3", "gene_name": "HDAC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55055-1", "protein_name": "Oxysterols receptor LXR-beta", "gene_name": "NR1H2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60341-1", "protein_name": "Lysine-specific histone demethylase 1A", "gene_name": "KDM1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKV8-1", "protein_name": "Protein argonaute-2", "gene_name": "AGO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05090-1", "protein_name": "Apolipoprotein D", "gene_name": "APOD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09472-1", "protein_name": "Histone acetyltransferase p300", "gene_name": "EP300", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55056-1", "protein_name": "Apolipoprotein C-IV", "gene_name": "APOC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9G7-1", "protein_name": "Protein argonaute-3", "gene_name": "AGO3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NDV7-1", "protein_name": "Trinucleotide repeat-containing gene 6A protein", "gene_name": "TNRC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCE1-1", "protein_name": "RNA helicase MOV-10", "gene_name": "MOV10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75164-1", "protein_name": "Lysine-specific demethylase 4A", "gene_name": "KDM4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75376-1", "protein_name": "Nuclear receptor corepressor 1", "gene_name": "NCOR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15788-1", "protein_name": "Nuclear receptor coactivator 1", "gene_name": "NCOA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95477-1", "protein_name": "Phospholipid-transporting ATPase ABCA1", "gene_name": "ABCA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45844-1", "protein_name": "ATP-binding cassette sub-family G member 1", "gene_name": "ABCG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H221-1", "protein_name": "ATP-binding cassette sub-family G member 8", "gene_name": "ABCG8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H222-1", "protein_name": "ATP-binding cassette sub-family G member 5", "gene_name": "ABCG5", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q7L9B9", "url": "https://www.uniprot.org/uniprotkb/Q7L9B9" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 268, "end_pos": 273, "sequence_org": "IVDFAK", "sequence_mut": "EVDFAE", "comment": "Abolishes interaction with NCOA2 without affecting interaction with GPS2; when associated with 438-A-A-439.", "evidence": [ { "database": "UniProtKB", "id": 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}, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": 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vitro and in transgenic mice.", "journal": "Atherosclerosis", "date": "2010", "authors": "Honzumi S, Shima A, Hiroshima A, Koieyama T, Ubukata N, Terasaka N", "reference": { "type": "PubMed", "id": "20494359", "url": "https://pubmed.ncbi.nlm.nih.gov/20494359" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q7L9B9-1", "protein_name": "Endonuclease/exonuclease/phosphatase family domain-containing protein 1", "gene_name": "EEPD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCK5-1", "protein_name": "Protein argonaute-4", "gene_name": "AGO4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL18-1", "protein_name": "Protein argonaute-1", "gene_name": "AGO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPQ9-3", "protein_name": "Trinucleotide repeat-containing gene 6B protein", "gene_name": "TNRC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCJ0-3", "protein_name": "Trinucleotide repeat-containing gene 6C protein", "gene_name": 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"P56559-1", "protein_name": "ADP-ribosylation factor-like protein 4C", "gene_name": "ARL4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02654-1", "protein_name": "Apolipoprotein C-I", "gene_name": "APOC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NB78-1", "protein_name": "Lysine-specific histone demethylase 2", "gene_name": "KDM1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19793-1", "protein_name": "Retinoic acid receptor RXR-alpha", "gene_name": "RXRA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60907-1", "protein_name": "F-box-like/WD repeat-containing protein TBL1X", "gene_name": "TBL1X", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BZK7-1", "protein_name": "F-box-like/WD repeat-containing protein TBL1XR1", "gene_name": "TBL1XR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02649-1", "protein_name": "Apolipoprotein E", "gene_name": "APOE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13227-1", "protein_name": "G protein 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"uniprot_canonical_ac": "Q9UKV8-1", "protein_name": "Protein argonaute-2", "gene_name": "AGO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05090-1", "protein_name": "Apolipoprotein D", "gene_name": "APOD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09472-1", "protein_name": "Histone acetyltransferase p300", "gene_name": "EP300", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55056-1", "protein_name": "Apolipoprotein C-IV", "gene_name": "APOC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9G7-1", "protein_name": "Protein argonaute-3", "gene_name": "AGO3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NDV7-1", "protein_name": "Trinucleotide repeat-containing gene 6A protein", "gene_name": "TNRC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCE1-1", "protein_name": "RNA helicase MOV-10", "gene_name": "MOV10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75164-1", "protein_name": "Lysine-specific demethylase 4A", "gene_name": "KDM4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75376-1", "protein_name": "Nuclear receptor corepressor 1", "gene_name": "NCOR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15788-1", "protein_name": "Nuclear receptor coactivator 1", "gene_name": "NCOA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95477-1", "protein_name": "Phospholipid-transporting ATPase ABCA1", "gene_name": "ABCA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45844-1", "protein_name": "ATP-binding cassette sub-family G member 1", "gene_name": "ABCG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H221-1", "protein_name": "ATP-binding cassette sub-family G member 8", "gene_name": "ABCG8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H222-1", "protein_name": "ATP-binding cassette sub-family G member 5", "gene_name": "ABCG5", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q7L9B9", "url": "https://www.uniprot.org/uniprotkb/Q7L9B9" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.21310851", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 36 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Liver X receptor beta (LXRbeta) interacts directly with ATP-binding cassette A1 (ABCA1) to promote high density lipoprotein formation during acute cholesterol accumulation.", "journal": "The Journal of biological chemistry", "date": "2011", "authors": "Hozoji-Inada M, Munehira Y, Nagao K, Kioka N, Ueda K", "reference": { "type": "PubMed", "id": "21507939", "url": "https://pubmed.ncbi.nlm.nih.gov/21507939" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q7L9B9-1", "protein_name": "Endonuclease/exonuclease/phosphatase family domain-containing protein 1", "gene_name": "EEPD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCK5-1", "protein_name": "Protein argonaute-4", "gene_name": "AGO4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL18-1", "protein_name": "Protein argonaute-1", "gene_name": "AGO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPQ9-3", "protein_name": "Trinucleotide repeat-containing gene 6B protein", "gene_name": "TNRC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCJ0-3", "protein_name": "Trinucleotide repeat-containing gene 6C protein", "gene_name": "TNRC6C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y618-1", "protein_name": "Nuclear receptor corepressor 2", "gene_name": "NCOR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02655-1", "protein_name": "Apolipoprotein C-II", "gene_name": "APOC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56559-1", "protein_name": "ADP-ribosylation factor-like protein 4C", "gene_name": "ARL4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02654-1", "protein_name": "Apolipoprotein C-I", "gene_name": "APOC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NB78-1", "protein_name": "Lysine-specific histone demethylase 2", "gene_name": "KDM1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19793-1", "protein_name": "Retinoic acid receptor RXR-alpha", "gene_name": "RXRA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60907-1", "protein_name": "F-box-like/WD repeat-containing protein TBL1X", "gene_name": "TBL1X", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BZK7-1", "protein_name": "F-box-like/WD repeat-containing protein TBL1XR1", "gene_name": "TBL1XR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02649-1", "protein_name": "Apolipoprotein E", "gene_name": "APOE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13227-1", "protein_name": "G protein pathway suppressor 2", "gene_name": "GPS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28702-1", "protein_name": "Retinoic acid receptor RXR-beta", "gene_name": "RXRB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11597-1", "protein_name": "Cholesteryl ester transfer protein", "gene_name": "CETP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4C1-1", "protein_name": "Lysine-specific demethylase 3A", "gene_name": "KDM3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13133-1", "protein_name": "Oxysterols receptor LXR-alpha", "gene_name": "NR1H3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15379-1", "protein_name": "Histone deacetylase 3", "gene_name": "HDAC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55055-1", "protein_name": "Oxysterols receptor LXR-beta", "gene_name": "NR1H2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60341-1", "protein_name": "Lysine-specific histone demethylase 1A", "gene_name": "KDM1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKV8-1", "protein_name": "Protein argonaute-2", "gene_name": "AGO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05090-1", "protein_name": "Apolipoprotein D", "gene_name": "APOD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09472-1", "protein_name": "Histone acetyltransferase p300", "gene_name": "EP300", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55056-1", "protein_name": "Apolipoprotein C-IV", "gene_name": "APOC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9G7-1", "protein_name": "Protein argonaute-3", 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}, { "uniprot_canonical_ac": "Q9H221-1", "protein_name": "ATP-binding cassette sub-family G member 8", "gene_name": "ABCG8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H222-1", "protein_name": "ATP-binding cassette sub-family G member 5", "gene_name": "ABCG5", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q7L9B9", "url": "https://www.uniprot.org/uniprotkb/Q7L9B9" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.21507939", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 36 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] 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"sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "MiR-26 controls LXR-dependent cholesterol efflux by targeting ABCA1 and ARL7.", "journal": "FEBS letters", "date": "2012", "authors": "Sun D, Zhang J, Xie J, Wei W, Chen M, Zhao X", "reference": { "type": "PubMed", "id": "22673513", "url": "https://pubmed.ncbi.nlm.nih.gov/22673513" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q7L9B9-1", "protein_name": "Endonuclease/exonuclease/phosphatase family domain-containing protein 1", "gene_name": "EEPD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCK5-1", "protein_name": "Protein argonaute-4", "gene_name": "AGO4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL18-1", "protein_name": "Protein argonaute-1", "gene_name": "AGO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPQ9-3", "protein_name": "Trinucleotide repeat-containing gene 6B protein", "gene_name": "TNRC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCJ0-3", "protein_name": "Trinucleotide repeat-containing gene 6C protein", "gene_name": "TNRC6C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y618-1", "protein_name": "Nuclear receptor corepressor 2", "gene_name": "NCOR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02655-1", "protein_name": "Apolipoprotein C-II", "gene_name": "APOC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56559-1", "protein_name": "ADP-ribosylation factor-like protein 4C", "gene_name": "ARL4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02654-1", "protein_name": "Apolipoprotein C-I", "gene_name": "APOC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NB78-1", "protein_name": "Lysine-specific histone demethylase 2", "gene_name": "KDM1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19793-1", "protein_name": "Retinoic acid receptor RXR-alpha", "gene_name": "RXRA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60907-1", "protein_name": "F-box-like/WD repeat-containing protein TBL1X", "gene_name": "TBL1X", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BZK7-1", 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"tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H221-1", "protein_name": "ATP-binding cassette sub-family G member 8", "gene_name": "ABCG8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H222-1", "protein_name": "ATP-binding cassette sub-family G member 5", "gene_name": "ABCG5", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q7L9B9", "url": "https://www.uniprot.org/uniprotkb/Q7L9B9" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.22673513", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 37 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], 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"sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "MicroRNA-613 represses lipogenesis in HepG2 cells by downregulating LXRalpha.", "journal": "Lipids in health and disease", "date": "2013", "authors": "Zhong D, Zhang Y, Zeng YJ, Gao M, Wu GZ, Hu CJ, Huang G, He FT", "reference": { "type": "PubMed", "id": "23496987", "url": "https://pubmed.ncbi.nlm.nih.gov/23496987" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q7L9B9-1", "protein_name": "Endonuclease/exonuclease/phosphatase family domain-containing protein 1", "gene_name": "EEPD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCK5-1", "protein_name": "Protein argonaute-4", "gene_name": "AGO4", 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"n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "MicroRNA-144 regulates hepatic ATP binding cassette transporter A1 and plasma high-density lipoprotein after activation of the nuclear receptor farnesoid X receptor.", "journal": "Circulation research", "date": "2013", "authors": "de Aguiar Vallim TQ, Tarling EJ, Kim T, Civelek M, Baldan A, Esau C, Edwards PA", "reference": { 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"uniprot_canonical_ac": "P02655-1", "protein_name": "Apolipoprotein C-II", "gene_name": "APOC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56559-1", "protein_name": "ADP-ribosylation factor-like protein 4C", "gene_name": "ARL4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02654-1", "protein_name": "Apolipoprotein C-I", "gene_name": "APOC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NB78-1", "protein_name": "Lysine-specific histone demethylase 2", "gene_name": "KDM1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19793-1", "protein_name": "Retinoic acid receptor RXR-alpha", "gene_name": "RXRA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60907-1", "protein_name": "F-box-like/WD repeat-containing protein TBL1X", "gene_name": "TBL1X", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BZK7-1", "protein_name": "F-box-like/WD repeat-containing protein TBL1XR1", "gene_name": "TBL1XR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02649-1", 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{ "uniprot_canonical_ac": "O60341-1", "protein_name": "Lysine-specific histone demethylase 1A", "gene_name": "KDM1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKV8-1", "protein_name": "Protein argonaute-2", "gene_name": "AGO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05090-1", "protein_name": "Apolipoprotein D", "gene_name": "APOD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09472-1", "protein_name": "Histone acetyltransferase p300", "gene_name": "EP300", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55056-1", "protein_name": "Apolipoprotein C-IV", "gene_name": "APOC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9G7-1", "protein_name": "Protein argonaute-3", "gene_name": "AGO3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NDV7-1", "protein_name": "Trinucleotide repeat-containing gene 6A protein", "gene_name": "TNRC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCE1-1", "protein_name": "RNA helicase MOV-10", "gene_name": 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"Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q7L9B9", "url": "https://www.uniprot.org/uniprotkb/Q7L9B9" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.23519696", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 36 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A deleterious mutation in the LOXHD1 gene causes autosomal recessive hearing loss in Ashkenazi Jews.", "journal": "American journal of medical genetics. 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0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Role of the chaperonin CCT/TRiC complex in G protein betagamma-dimer assembly.", "journal": "The Journal of biological chemistry", "date": "2006", "authors": "Wells CA, Dingus J, Hildebrandt JD", "reference": { "type": "PubMed", "id": "16702223", "url": "https://pubmed.ncbi.nlm.nih.gov/16702223" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O75916-1", "protein_name": "Regulator of G protein signaling 9", "gene_name": "RGS9", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94810-1", "protein_name": "Regulator of G protein signaling 11", "gene_name": "RGS11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49802-1", "protein_name": "Regulator of G protein signaling 7", "gene_name": "RGS7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50148-1", "protein_name": "Guanine nucleotide-binding protein G(q) subunit alpha", 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"gene_name": "GNG10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2W3-1", "protein_name": "Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-13", "gene_name": "GNG13", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49368-1", "protein_name": "T-complex protein 1 subunit gamma", "gene_name": "CCT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99832-1", "protein_name": "T-complex protein 1 subunit eta", "gene_name": "CCT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19784-1", "protein_name": "Casein kinase II subunit alpha'", "gene_name": "CSNK2A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50991-1", "protein_name": "T-complex protein 1 subunit delta", "gene_name": "CCT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17987-1", "protein_name": "T-complex protein 1 subunit alpha", "gene_name": "TCP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95837-1", "protein_name": "Guanine nucleotide-binding protein subunit alpha-14", 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"uniprot_canonical_ac": "Q13371-1", "protein_name": "Phosducin-like protein", "gene_name": "PDCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49758-4", "protein_name": "Regulator of G protein signaling 6", "gene_name": "RGS6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48643-1", "protein_name": "T-complex protein 1 subunit epsilon", "gene_name": "CCT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68400-1", "protein_name": "Casein kinase II subunit alpha", "gene_name": "CSNK2A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P67870-1", "protein_name": "Casein kinase II subunit beta", "gene_name": "CSNK2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAV0-1", "protein_name": "Guanine nucleotide-binding protein subunit beta-4", "gene_name": "GNB4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61952-1", "protein_name": "Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-11", "gene_name": "GNG11", "tax_name": "Human" }, { 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", 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"total", "count": 39 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", 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"o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Retinal cone photoreceptors require phosducin-like protein 1 for G protein complex assembly and signaling.", "journal": "PloS one", "date": "2015", "authors": "Tracy CM, Kolesnikov AV, Blake DR, Chen CK, Baehr W, Kefalov VJ, Willardson BM", "reference": { "type": "PubMed", "id": "25659125", "url": "https://pubmed.ncbi.nlm.nih.gov/25659125" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O75916-1", "protein_name": "Regulator of G protein signaling 9", "gene_name": "RGS9", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94810-1", "protein_name": "Regulator of G protein signaling 11", "gene_name": "RGS11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49802-1", "protein_name": "Regulator of G protein signaling 7", "gene_name": "RGS7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50148-1", 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"count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular characterization of human and rat RGS9L, a novel splice variant enriched in dopamine target regions, and chromosomal localization of the RGS9 gene.", "journal": "Mol. Pharmacol.", "date": "1998", "authors": "Granneman J G, Zhai Y, Zhu Z, Bannon M J, Burchett S A, Schmidt C J, Andrade R, Cooper J", "reference": { "type": "PubMed", "id": "9765512", "url": "https://pubmed.ncbi.nlm.nih.gov/9765512" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O75916-1", "protein_name": "Regulator of G protein signaling 9", "gene_name": "RGS9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49805-1", "protein_name": "Regulator of G protein signaling 9", "gene_name": "Rgs9", "tax_name": "Rat" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O75916", "url": "https://www.uniprot.org/uniprotkb/O75916" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9765512", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification, expression, and characterization of a cDNA encoding human endoplasmic reticulum mannosidase I, the enzyme that catalyzes the first mannose trimming step in mammalian Asn-linked oligosaccharide biosynthesis.", "journal": "The Journal of biological chemistry", "date": "1999", "authors": "Gonzalez DS, Karaveg K, Vandersall-Nairn AS, Lal A, Moremen KW", "reference": { "type": "PubMed", "id": "10409699", "url": "https://pubmed.ncbi.nlm.nih.gov/10409699" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BZQ6-1", "protein_name": "ER degradation-enhancing alpha-mannosidase-like protein 3", "gene_name": "EDEM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BV94-1", "protein_name": "ER degradation-enhancing alpha-mannosidase-like protein 2", "gene_name": "EDEM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKV5-1", "protein_name": "E3 ubiquitin-protein ligase AMFR", "gene_name": "AMFR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NYU1-1", "protein_name": "UDP-glucose:glycoprotein glucosyltransferase 2", "gene_name": "UGGT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86TM6-1", "protein_name": "E3 ubiquitin-protein ligase synoviolin", "gene_name": "SYVN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBV2-1", "protein_name": "Protein sel-1 homolog 1", "gene_name": "SEL1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WU17-1", "protein_name": "E3 ubiquitin-protein ligase RNF139", "gene_name": "RNF139", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00237-1", "protein_name": "E3 ubiquitin-protein ligase RNF103", "gene_name": "RNF103", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13438-1", "protein_name": "Protein OS-9", "gene_name": "OS9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKM7-1", "protein_name": "Endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase", "gene_name": "MAN1B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60858-1", "protein_name": "E3 ubiquitin-protein ligase TRIM13", "gene_name": "TRIM13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99942-1", "protein_name": "E3 ubiquitin-protein ligase RNF5", "gene_name": "RNF5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { 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"protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BZQ6", "url": "https://www.uniprot.org/uniprotkb/Q9BZQ6" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10409699", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 21 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { 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"o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Two homologues encoding human UDP-glucose:glycoprotein glucosyltransferase differ in mRNA expression and enzymatic activity.", "journal": "Biochemistry", "date": "2000", "authors": "Arnold SM, Fessler LI, Fessler JH, Kaufman RJ", "reference": { "type": "PubMed", "id": "10694380", "url": "https://pubmed.ncbi.nlm.nih.gov/10694380" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BZQ6-1", "protein_name": "ER degradation-enhancing alpha-mannosidase-like protein 3", "gene_name": "EDEM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BV94-1", "protein_name": "ER degradation-enhancing alpha-mannosidase-like protein 2", "gene_name": "EDEM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKV5-1", "protein_name": "E3 ubiquitin-protein ligase AMFR", "gene_name": "AMFR", "tax_name": "Human" }, { 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Baxevanis AD, Klinger KW, Landes GM, Trent JM, Carpten JD", "reference": { "type": "PubMed", "id": "11318611", "url": "https://pubmed.ncbi.nlm.nih.gov/11318611" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BZQ6-1", "protein_name": "ER degradation-enhancing alpha-mannosidase-like protein 3", "gene_name": "EDEM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BZQ8-1", "protein_name": "Protein Niban 1", "gene_name": "NIBAN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXD5-1", "protein_name": "N-acetylneuraminate lyase", "gene_name": "NPL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57771-1", "protein_name": "Regulator of G protein signaling 8", "gene_name": "RGS8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BZQ4-1", "protein_name": "Nicotinamide/nicotinic acid mononucleotide adenylyltransferase 2", "gene_name": "NMNAT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5T5J6-1", "protein_name": "Transcriptional 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