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"glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Regulation by Per-Arnt-Sim (PAS) kinase of pancreatic duodenal homeobox-1 nuclear import in pancreatic beta-cells.", "journal": "Biochemical Society transactions", "date": "2006", "authors": "An R, da Silva Xavier G, Hao HX, Semplici F, Rutter J, Rutter GA", "reference": { "type": "PubMed", "id": "17052199", "url": "https://pubmed.ncbi.nlm.nih.gov/17052199" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96RG2-1", "protein_name": "PAS domain-containing serine/threonine-protein kinase", "gene_name": "PASK", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52946-1", "protein_name": "Pancreas/duodenum homeobox protein 1", "gene_name": "Pdx1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P52945-1", "protein_name": "Pancreas/duodenum homeobox protein 1", "gene_name": "PDX1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96RG2", "url": "https://www.uniprot.org/uniprotkb/Q96RG2" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], 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Mol. Life Sci.", "date": "2009", "authors": "Schl\u00e4fli P, Borter E, Spielmann P, Wenger R H", "reference": { "type": "PubMed", "id": "19189049", "url": "https://pubmed.ncbi.nlm.nih.gov/19189049" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96RG2-1", "protein_name": "PAS domain-containing serine/threonine-protein kinase", "gene_name": "PASK", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96RG2", "url": "https://www.uniprot.org/uniprotkb/Q96RG2" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.19189049", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { 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}, { "title": "Activation of PASK by mTORC1 is required for the onset of the terminal differentiation program.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2019", "authors": "Kikani CK, Wu X, Fogarty S, Kang SAW, Dephoure N, Gygi SP, Sabatini DM, Rutter J", "reference": { "type": "PubMed", "id": "31072927", "url": "https://pubmed.ncbi.nlm.nih.gov/31072927" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96RG2-1", "protein_name": "PAS domain-containing serine/threonine-protein kinase", "gene_name": "PASK", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96RG2", "url": "https://www.uniprot.org/uniprotkb/Q96RG2" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.31072927", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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Interaction of the cytoplasmic tail sorting signals with AP-1 Golgi-specific assembly proteins.", "journal": "The Journal of biological chemistry", "date": "1999", "authors": "Teuchert M, Schafer W, Berghofer S, Hoflack B, Klenk HD, Garten W", "reference": { "type": "PubMed", "id": "10075724", "url": "https://pubmed.ncbi.nlm.nih.gov/10075724" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09958-1", "protein_name": "Furin", "gene_name": "FURIN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBV2-1", "protein_name": "Protein sel-1 homolog 1", "gene_name": "SEL1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UM47-1", "protein_name": "Neurogenic locus notch homolog protein 3", "gene_name": "NOTCH3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99466-1", "protein_name": "Neurogenic locus notch homolog protein 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"tax_name": "Human" }, { "uniprot_canonical_ac": "P46531-1", "protein_name": "Neurogenic locus notch homolog protein 1", "gene_name": "NOTCH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93084-2", "protein_name": "Sarcoplasmic/endoplasmic reticulum calcium ATPase 3", "gene_name": "ATP2A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NES3-1", "protein_name": "Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe", "gene_name": "LFNG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00587-1", "protein_name": "Beta-1,3-N-acetylglucosaminyltransferase manic fringe", "gene_name": "MFNG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y274-1", "protein_name": "Type 2 lactosamine alpha-2,3-sialyltransferase", "gene_name": "ST3GAL6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15291-1", "protein_name": "Beta-1,4-galactosyltransferase 1", "gene_name": "B4GALT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15363-1", "protein_name": "Transmembrane emp24 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "p24 proteins and quality control of LIN-12 and GLP-1 trafficking in Caenorhabditis elegans.", "journal": "The Journal of cell biology", "date": "1999", "authors": "Wen C, Greenwald I", "reference": { "type": "PubMed", "id": "10366590", "url": "https://pubmed.ncbi.nlm.nih.gov/10366590" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09958-1", "protein_name": "Furin", "gene_name": "FURIN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBV2-1", "protein_name": "Protein sel-1 homolog 1", "gene_name": "SEL1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UM47-1", "protein_name": "Neurogenic locus notch homolog protein 3", "gene_name": "NOTCH3", "tax_name": "Human" }, { 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Glycosyltransferase activity of Fringe modulates Notch-Delta interactions.", "journal": "Nature", "date": "2000", "authors": "Bruckner K, Perez L, Clausen H, Cohen S", "reference": { "type": "PubMed", "id": "10935637", "url": "https://pubmed.ncbi.nlm.nih.gov/10935637" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09958-1", "protein_name": "Furin", "gene_name": "FURIN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBV2-1", "protein_name": "Protein sel-1 homolog 1", "gene_name": "SEL1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UM47-1", "protein_name": "Neurogenic locus notch homolog protein 3", "gene_name": "NOTCH3", "tax_name": "Human" }, { "uniprot_canonical_ac": 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Biol. Cell", "date": "2000", "authors": "Echard A, Opdam FJ, de Leeuw HJ, Jollivet F, Savelkoul P, Hendriks W, Voorberg J, Goud B, Fransen JA", "reference": { "type": "PubMed", "id": "11071909", "url": "https://pubmed.ncbi.nlm.nih.gov/11071909" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P20340", "url": "https://www.uniprot.org/uniprotkb/P20340" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11071909", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", 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specific epidermal growth factor-repeats and is expressed in proliferating neuroepithelium.", "journal": "Mechanisms of development", "date": "1994", "authors": "Lardelli M, Dahlstrand J, Lendahl U", "reference": { "type": "PubMed", "id": "7918097", "url": "https://pubmed.ncbi.nlm.nih.gov/7918097" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09958-1", "protein_name": "Furin", "gene_name": "FURIN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBV2-1", "protein_name": "Protein sel-1 homolog 1", "gene_name": "SEL1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UM47-1", "protein_name": "Neurogenic locus notch homolog protein 3", "gene_name": "NOTCH3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99466-1", "protein_name": "Neurogenic locus notch homolog protein 4", "gene_name": "NOTCH4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q04721-1", "protein_name": "Neurogenic locus notch homolog protein 2", "gene_name": "NOTCH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y644-1", "protein_name": "Beta-1,3-N-acetylglucosaminyltransferase radical fringe", "gene_name": "RFNG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11206-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4", "gene_name": "ST3GAL4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16615-1", "protein_name": "Sarcoplasmic/endoplasmic reticulum calcium ATPase 2", "gene_name": "ATP2A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14983-1", "protein_name": "Sarcoplasmic/endoplasmic reticulum calcium ATPase 1", "gene_name": "ATP2A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11203-1", "protein_name": "CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase", "gene_name": "ST3GAL3", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"tax_name": "Human" }, { "uniprot_canonical_ac": "Q61982-1", "protein_name": "Neurogenic locus notch homolog protein 3", "gene_name": "Notch3", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P20340", "url": "https://www.uniprot.org/uniprotkb/P20340" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.7918097", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 19 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { 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"protein_name": "Type 2 lactosamine alpha-2,3-sialyltransferase", "gene_name": "ST3GAL6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15291-1", "protein_name": "Beta-1,4-galactosyltransferase 1", "gene_name": "B4GALT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15363-1", "protein_name": "Transmembrane emp24 domain-containing protein 2", "gene_name": "TMED2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31695-1", "protein_name": "Neurogenic locus notch homolog protein 4", "gene_name": "Notch4", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P20340", "url": "https://www.uniprot.org/uniprotkb/P20340" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8681805", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 19 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", 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"gene_name": "TMED2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P20340", "url": "https://www.uniprot.org/uniprotkb/P20340" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9207795", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 21 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Intracellular cleavage of Notch leads to a heterodimeric receptor on the plasma membrane.", "journal": "Cell", "date": "1997", "authors": "Blaumueller CM, Qi H, Zagouras P, Artavanis-Tsakonas S", "reference": { "type": "PubMed", "id": "9244302", "url": "https://pubmed.ncbi.nlm.nih.gov/9244302" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09958-1", "protein_name": "Furin", "gene_name": "FURIN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBV2-1", "protein_name": "Protein sel-1 homolog 1", "gene_name": "SEL1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UM47-1", "protein_name": "Neurogenic locus notch homolog protein 3", "gene_name": "NOTCH3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99466-1", "protein_name": "Neurogenic locus notch homolog protein 4", "gene_name": "NOTCH4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q04721-1", "protein_name": "Neurogenic locus notch homolog protein 2", "gene_name": "NOTCH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y644-1", "protein_name": "Beta-1,3-N-acetylglucosaminyltransferase radical fringe", "gene_name": "RFNG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11206-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4", "gene_name": "ST3GAL4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16615-1", "protein_name": "Sarcoplasmic/endoplasmic reticulum calcium ATPase 2", "gene_name": "ATP2A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14983-1", "protein_name": "Sarcoplasmic/endoplasmic reticulum calcium ATPase 1", "gene_name": "ATP2A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11203-1", "protein_name": "CMP-N-acetylneuraminate-beta-1,4-galactoside 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"uniprot_canonical_ac": "Q15363-1", "protein_name": "Transmembrane emp24 domain-containing protein 2", "gene_name": "TMED2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P20340", "url": "https://www.uniprot.org/uniprotkb/P20340" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9244302", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 18 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": 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"Human" }, { "uniprot_canonical_ac": "Q9UM47-1", "protein_name": "Neurogenic locus notch homolog protein 3", "gene_name": "NOTCH3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99466-1", "protein_name": "Neurogenic locus notch homolog protein 4", "gene_name": "NOTCH4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q04721-1", "protein_name": "Neurogenic locus notch homolog protein 2", "gene_name": "NOTCH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y644-1", "protein_name": "Beta-1,3-N-acetylglucosaminyltransferase radical fringe", "gene_name": "RFNG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11206-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4", "gene_name": "ST3GAL4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16615-1", "protein_name": "Sarcoplasmic/endoplasmic reticulum calcium ATPase 2", "gene_name": "ATP2A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14983-1", "protein_name": "Sarcoplasmic/endoplasmic reticulum calcium ATPase 1", "gene_name": "ATP2A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11203-1", "protein_name": "CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase", "gene_name": "ST3GAL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46531-1", "protein_name": "Neurogenic locus notch homolog protein 1", "gene_name": "NOTCH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93084-2", "protein_name": "Sarcoplasmic/endoplasmic reticulum calcium ATPase 3", "gene_name": "ATP2A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NES3-1", "protein_name": "Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe", "gene_name": "LFNG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00587-1", "protein_name": "Beta-1,3-N-acetylglucosaminyltransferase manic fringe", "gene_name": "MFNG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y274-1", "protein_name": "Type 2 lactosamine alpha-2,3-sialyltransferase", "gene_name": "ST3GAL6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15291-1", "protein_name": "Beta-1,4-galactosyltransferase 1", "gene_name": "B4GALT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01705-1", "protein_name": "Neurogenic locus notch homolog protein 1", "gene_name": "Notch1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q15363-1", "protein_name": "Transmembrane emp24 domain-containing protein 2", "gene_name": "TMED2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P20340", "url": "https://www.uniprot.org/uniprotkb/P20340" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 1651, "end_pos": 1654, "sequence_org": "RQRR", "sequence_mut": "AAAA", "comment": "Processing by furin-like convertase abolished.", "evidence": [ { "database": "UniProtKB", "id": "Q01705", "url": 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maturation and signal transduction.", "journal": "Cell", "date": "1998", "authors": "Chan YM, Jan YN", "reference": { "type": "PubMed", "id": "9727485", "url": "https://pubmed.ncbi.nlm.nih.gov/9727485" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09958-1", "protein_name": "Furin", "gene_name": "FURIN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBV2-1", "protein_name": "Protein sel-1 homolog 1", "gene_name": "SEL1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UM47-1", "protein_name": "Neurogenic locus notch homolog protein 3", "gene_name": "NOTCH3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99466-1", "protein_name": "Neurogenic locus notch homolog protein 4", "gene_name": "NOTCH4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q04721-1", "protein_name": "Neurogenic locus notch homolog protein 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the Mammalian Katanin Family of Microtubule-severing Enzymes Defines Katanin p80 subunit B-like 1 (KATNBL1) as a Regulator of Mammalian Katanin Microtubule-severing.", "journal": "Molecular & cellular proteomics : MCP", "date": "2016", "authors": "Cheung K, Senese S, Kuang J, Bui N, Ongpipattanakul C, Gholkar A, Cohn W, Capri J, Whitelegge JP, Torres JZ", "reference": { "type": "PubMed", "id": "26929214", "url": "https://pubmed.ncbi.nlm.nih.gov/26929214" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9H079-1", "protein_name": "KATNB1-like protein 1", "gene_name": "KATNBL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA0-1", "protein_name": "Katanin p80 WD40 repeat-containing subunit B1", "gene_name": "KATNB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BW62-1", "protein_name": "Katanin p60 ATPase-containing subunit A-like 1", "gene_name": "KATNAL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75449-1", "protein_name": 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}, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The 5-prime region of the COX4 gene contains a novel overlapping gene, NOC4.", "journal": "Mamm. Genome", "date": "1999", "authors": "Bachman NJ, Wu W, Schmidt TR, Grossman LI, Lomax MI", "reference": { "type": "PubMed", "id": "10337626", "url": "https://pubmed.ncbi.nlm.nih.gov/10337626" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P13073-1", "protein_name": "Cytochrome c oxidase subunit 4 isoform 1, mitochondrial", "gene_name": "COX4I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O70378-1", "protein_name": "ER membrane protein complex subunit 8", "gene_name": "Emc8", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O43402-1", "protein_name": "ER membrane protein complex subunit 8", "gene_name": "EMC8", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P13073", "url": "https://www.uniprot.org/uniprotkb/P13073" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10337626", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Subunit IV of human cytochrome c oxidase, polymorphism and a putative isoform.", "journal": "Biochim. Biophys. Acta", "date": "1992", "authors": "Van Kuilenburg AB, Van Beeumen JJ, Demol H, Van den Bogert C, Schouten I, Muijsers AO", "reference": { "type": "PubMed", "id": "1311608", "url": "https://pubmed.ncbi.nlm.nih.gov/1311608" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P13073-1", "protein_name": "Cytochrome c oxidase subunit 4 isoform 1, mitochondrial", "gene_name": "COX4I1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P13073", "url": "https://www.uniprot.org/uniprotkb/P13073" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.1311608", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Novel use of a chimpanzee pseudogene for chromosomal mapping of human cytochrome c oxidase subunit IV.", "journal": "Gene", "date": "1990", "authors": "Lomax MI, Welch MD, Darras BT, Francke U, Grossman LI", "reference": { "type": "PubMed", "id": "2157630", "url": "https://pubmed.ncbi.nlm.nih.gov/2157630" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P13073-1", "protein_name": "Cytochrome c oxidase subunit 4 isoform 1, mitochondrial", "gene_name": "COX4I1", "tax_name": 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Isolation of a cDNA clone encoding subunit IV of human cytochrome c oxidase.", "journal": "Gene", "date": "1987", "authors": "Zeviani M, Nakagawa M, Herbert J, Lomax MI, Grossman LI, Sherbany AA, Miranda AF, DiMauro S, Schon EA", "reference": { "type": "PubMed", "id": "2444497", "url": "https://pubmed.ncbi.nlm.nih.gov/2444497" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P13073-1", "protein_name": "Cytochrome c oxidase subunit 4 isoform 1, mitochondrial", "gene_name": "COX4I1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P13073", "url": "https://www.uniprot.org/uniprotkb/P13073" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.2444497", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], 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Part A", "date": "2019", "authors": "Pillai NR, AlDhaheri NS, Ghosh R, Lim J, Streff H, Nayak A, Graham BH, Hanchard NA, Elsea SH, Scaglia F", "reference": { "type": "PubMed", "id": "31290619", "url": "https://pubmed.ncbi.nlm.nih.gov/31290619" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P13073-1", "protein_name": "Cytochrome c oxidase subunit 4 isoform 1, mitochondrial", "gene_name": "COX4I1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P13073", "url": "https://www.uniprot.org/uniprotkb/P13073" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.31290619", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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Chem.", "date": "2003", "authors": "Carlson Christopher G, Barrientos Antoni, Tzagoloff Alexander, Glerum D Moira", "reference": { "type": "PubMed", "id": "12446688", "url": "https://pubmed.ncbi.nlm.nih.gov/12446688" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P0S2-1", "protein_name": "Cytochrome c oxidase assembly protein COX16 homolog, mitochondrial", "gene_name": "COX16", "tax_name": "Human" }, { "uniprot_canonical_ac": "P47081-1", "protein_name": "Cytochrome c oxidase assembly protein COX16, mitochondrial", "gene_name": "COX16", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P0S2", "url": "https://www.uniprot.org/uniprotkb/Q9P0S2" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12446688", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Studies of COX16, COX19, and PET191 in human cytochrome-c oxidase deficiency.", "journal": "Arch. Neurol.", "date": "2004", "authors": "Tay SK, Nesti C, Mancuso M, Schon EA, Shanske S, Bonilla E, Davidson MM, Dimauro S", "reference": { "type": "PubMed", "id": "15596615", "url": "https://pubmed.ncbi.nlm.nih.gov/15596615" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P0S2-1", "protein_name": "Cytochrome c oxidase assembly protein COX16 homolog, mitochondrial", "gene_name": "COX16", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P0S2", "url": "https://www.uniprot.org/uniprotkb/Q9P0S2" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15596615", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "COX16 is required for assembly of cytochrome c oxidase in human cells and is involved in copper delivery to COX2.", "journal": "Biochimica et biophysica acta. Bioenergetics", "date": "2018", "authors": "Cerqua C, Morbidoni V, Desbats MA, Doimo M, Frasson C, Sacconi S, Baldoin MC, Sartori G, Basso G, Salviati L, Trevisson E", "reference": { "type": "PubMed", "id": "29355485", "url": "https://pubmed.ncbi.nlm.nih.gov/29355485" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P0S2-1", "protein_name": "Cytochrome c oxidase assembly protein COX16 homolog, mitochondrial", "gene_name": "COX16", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00403-1", "protein_name": "Cytochrome c oxidase subunit 2", "gene_name": "MT-CO2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P0S2", "url": "https://www.uniprot.org/uniprotkb/Q9P0S2" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.29355485", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Assignment of the human genes coding for cytochrome c oxidase subunits Va (COX5A), VIc (COX6C) and VIIc (COX7C) to chromosome bands 15q25, 8q22-->q23 and 5q14 and of three pseudogenes (COX5AP1, COX6CP1, COX7CP1) to 14q22, 16p12 and 13q14-->q21 by FISH and radiation hybrid mapping.", "journal": "Cytogenet. Cell Genet.", "date": "1998", "authors": "Hofmann S, Lichtner P, Schuffenhauer S, Gerbitz K D, Meitinger T", "reference": { "type": "PubMed", "id": "10072584", "url": "https://pubmed.ncbi.nlm.nih.gov/10072584" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P15954-1", "protein_name": "Cytochrome c oxidase subunit 7C, mitochondrial", "gene_name": "COX7C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09669-1", "protein_name": "Cytochrome c oxidase subunit 6C", "gene_name": "COX6C", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P15954", "url": "https://www.uniprot.org/uniprotkb/P15954" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10072584", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Subunits VIIa,b,c of human cytochrome c oxidase. Identification of both 'heart-type' and 'liver-type' isoforms of subunit VIIa in human heart.", "journal": "Eur. J. Biochem.", "date": "1992", "authors": "Van Kuilenburg AB, Van Beeumen JJ, Van der Meer NM, Muijsers AO", "reference": { "type": "PubMed", "id": "1309697", "url": "https://pubmed.ncbi.nlm.nih.gov/1309697" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P15954-1", "protein_name": "Cytochrome c oxidase subunit 7C, mitochondrial", "gene_name": "COX7C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14406-1", "protein_name": "Cytochrome c oxidase subunit 7A2, mitochondrial", "gene_name": "COX7A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24310-1", "protein_name": "Cytochrome c oxidase subunit 7A1, mitochondrial", "gene_name": "COX7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24311-1", "protein_name": "Cytochrome c oxidase subunit 7B, mitochondrial", "gene_name": "COX7B", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P15954", "url": 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Sequence of a cDNA specifying subunit VIIc of human cytochrome c oxidase.", "journal": "Nucleic Acids Res.", "date": "1990", "authors": "Koga Y, Fabrizi G M, Mita S, Arnaudo E, Lomax M I, Aqua M S, Grossman L I, Schon E A", "reference": { "type": "PubMed", "id": "2155413", "url": "https://pubmed.ncbi.nlm.nih.gov/2155413" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P15954-1", "protein_name": "Cytochrome c oxidase subunit 7C, mitochondrial", "gene_name": "COX7C", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P15954", "url": "https://www.uniprot.org/uniprotkb/P15954" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.2155413", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The expression level of COX7C associates with venous thromboembolism in colon cancer patients.", "journal": "Clinical and experimental medicine", "date": "2020", "authors": "Wu B, Chen S, Zhuang L, Zeng J", "reference": { "type": "PubMed", "id": "32653968", "url": "https://pubmed.ncbi.nlm.nih.gov/32653968" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P15954-1", "protein_name": "Cytochrome c oxidase subunit 7C, 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