[ { "title": "Biallelic variants in LINGO1 are associated with autosomal recessive intellectual disability, microcephaly, speech and motor delay.", "journal": "Genetics in medicine : official journal of the American College of Medical Genetics", "date": "2018", "authors": "Ansar M, Riazuddin S, Sarwar MT, Makrythanasis P, Paracha SA, Iqbal Z, Khan J, Assir MZ, Hussain M, Razzaq A, Polla DL, Taj AS, Holmgren A, Batool N, Misceo D, Iwaszkiewicz J, de Brouwer APM, Guipponi M, Hanquinet S, Zoete V, Santoni FA, Frengen E, Ahmed J, Riazuddin S, van Bokhoven H, Antonarakis SE", "reference": { "type": "PubMed", "id": "28837161", "url": "https://pubmed.ncbi.nlm.nih.gov/28837161" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96FE5-1", "protein_name": "Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1", "gene_name": "LINGO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12965-1", "protein_name": 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"field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "LINGO-1 shRNA protects the brain against ischemia/reperfusion injury by inhibiting the activation of NF-kappaB and JAK2/STAT3.", "journal": "Human cell", "date": "2021", "authors": "Zhu J, Zhu Z, Ren Y, Dong Y, Li Y, Yang X", "reference": { "type": "PubMed", "id": "33830473", "url": "https://pubmed.ncbi.nlm.nih.gov/33830473" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96FE5-1", "protein_name": "Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1", "gene_name": "LINGO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9D1T0-1", "protein_name": "Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1", "gene_name": "Lingo1", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": 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Two Important Targets for Remyelination and Regeneration.", "journal": "International journal of molecular sciences", "date": "2023-02-24", "authors": "Kalafatakis Ilias, Papagianni Fevronia, Theodorakis Konstantinos, Karagogeos Domna", "reference": { "type": "PubMed", "id": "36901909", "url": "https://pubmed.ncbi.nlm.nih.gov/36901909" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96FE5-1", "protein_name": "Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1", "gene_name": "LINGO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC3-1", "protein_name": "Reticulon-4", "gene_name": "RTN4", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96FE5", "url": "https://www.uniprot.org/uniprotkb/Q96FE5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": 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"authors": "Andrews Jessica L, Zalesky Andrew, Nair Shalima, Sullivan Ryan P, Green Melissa J, Pantelis Christos, Newell Kelly A, Fernandez Francesca", "reference": { "type": "PubMed", "id": "37958608", "url": "https://pubmed.ncbi.nlm.nih.gov/37958608" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96FE5-1", "protein_name": "Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1", "gene_name": "LINGO1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96FE5", "url": "https://www.uniprot.org/uniprotkb/Q96FE5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.37958608", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": 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"uniprot_canonical_ac": "Q99962-1", "protein_name": "Endophilin-A1", "gene_name": "SH3GL2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P32004", "url": "https://www.uniprot.org/uniprotkb/P32004" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10608864", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 48 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Homophilic NCAM interactions interfere with L1 stimulated neurite outgrowth.", "journal": "FEBS letters", "date": "1999", "authors": "Kristiansen LV, Marques FA, Soroka V, Ronn LC, Kiselyov V, Pedersen N, Berezin V, Bock E", "reference": { "type": "PubMed", "id": "10611478", "url": "https://pubmed.ncbi.nlm.nih.gov/10611478" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32004-1", "protein_name": "Neural cell adhesion molecule L1", "gene_name": "L1CAM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28482-1", "protein_name": "Mitogen-activated protein kinase 1", "gene_name": "MAPK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13153-1", "protein_name": "Serine/threonine-protein kinase PAK 1", "gene_name": "PAK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P36507-1", "protein_name": "Dual specificity mitogen-activated protein kinase kinase 2", "gene_name": "MAP2K2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19784-1", "protein_name": "Casein kinase II subunit alpha'", "gene_name": "CSNK2A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08514-1", "protein_name": "Integrin alpha-IIb", "gene_name": "ITGA2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06756-1", "protein_name": "Integrin alpha-V", "gene_name": "ITGAV", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08648-1", "protein_name": "Integrin alpha-5", "gene_name": "ITGA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52735-1", "protein_name": "Guanine nucleotide exchange factor VAV2", "gene_name": "VAV2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63000-1", "protein_name": "Ras-related C3 botulinum toxin substrate 1", "gene_name": "RAC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05556-1", "protein_name": "Integrin beta-1", "gene_name": "ITGB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14786-1", "protein_name": "Neuropilin-1", "gene_name": "NRP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05106-1", "protein_name": "Integrin beta-3", "gene_name": "ITGB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02750-1", "protein_name": "Dual specificity mitogen-activated protein kinase kinase 1", "gene_name": "MAP2K1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13797-1", "protein_name": "Integrin alpha-9", "gene_name": "ITGA9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13591-2", "protein_name": "Neural cell adhesion molecule 1", "gene_name": "NCAM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68400-1", "protein_name": "Casein kinase II subunit alpha", "gene_name": "CSNK2A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P67870-1", "protein_name": "Casein kinase II subunit beta", "gene_name": "CSNK2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27361-1", "protein_name": "Mitogen-activated protein kinase 3", "gene_name": "MAPK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00533-1", "protein_name": "Epidermal growth factor receptor", "gene_name": "EGFR", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P32004", "url": "https://www.uniprot.org/uniprotkb/P32004" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10611478", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 20 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Evidence for the involvement of KIF4 in the anterograde transport of L1-containing vesicles.", "journal": "The Journal of cell biology", "date": "2000", "authors": "Peretti D, Peris L, Rosso S, Quiroga S, Caceres A", "reference": { "type": "PubMed", "id": "10747093", "url": "https://pubmed.ncbi.nlm.nih.gov/10747093" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32004-1", "protein_name": "Neural cell adhesion molecule L1", "gene_name": "L1CAM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28482-1", "protein_name": "Mitogen-activated protein kinase 1", "gene_name": "MAPK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95782-1", "protein_name": "AP-2 complex subunit alpha-1", "gene_name": "AP2A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PEY2-1", "protein_name": "Tubulin alpha-3E chain", "gene_name": "TUBA3E", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75582-1", "protein_name": "Ribosomal protein S6 kinase alpha-5", "gene_name": "RPS6KA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51812-1", "protein_name": "Ribosomal protein S6 kinase alpha-3", "gene_name": "RPS6KA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75676-1", "protein_name": "Ribosomal protein S6 kinase alpha-4", "gene_name": "RPS6KA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15349-1", "protein_name": "Ribosomal protein S6 kinase alpha-2", "gene_name": "RPS6KA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26038-1", "protein_name": "Moesin", "gene_name": "MSN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49757-1", "protein_name": "Protein numb homolog", "gene_name": "NUMB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UK32-1", "protein_name": "Ribosomal protein S6 kinase alpha-6", "gene_name": "RPS6KA6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95239-1", "protein_name": "Chromosome-associated kinesin KIF4A", "gene_name": "KIF4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2VIQ3-1", "protein_name": "Chromosome-associated kinesin KIF4B", "gene_name": "KIF4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NNZ2-1", "protein_name": "Tubulin beta 8B", "gene_name": "TUBB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3ZCM7-1", "protein_name": "Tubulin beta-8 chain", "gene_name": "TUBB8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00610-1", "protein_name": "Clathrin heavy chain 1", "gene_name": "CLTC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15418-1", "protein_name": "Ribosomal protein S6 kinase alpha-1", "gene_name": "RPS6KA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63010-1", "protein_name": "AP-2 complex subunit beta", "gene_name": "AP2B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63261-1", "protein_name": "Actin, cytoplasmic 2", "gene_name": "ACTG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50570-1", "protein_name": "Dynamin-2", "gene_name": "DNM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96CW1-1", "protein_name": "AP-2 complex subunit mu", "gene_name": "AP2M1", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0MZ66-1", "protein_name": "Shootin-1", "gene_name": "SHTN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09496-1", "protein_name": "Clathrin light chain A", "gene_name": "CLTA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35241-1", "protein_name": "Radixin", "gene_name": "RDX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H853-1", "protein_name": "Tubulin-like protein alpha-4B", "gene_name": "TUBA4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15311-1", "protein_name": "Ezrin", "gene_name": "EZR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q05193-1", "protein_name": "Dynamin-1", "gene_name": "DNM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16555-1", "protein_name": "Dihydropyrimidinase-related protein 2", "gene_name": "DPYSL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UQ16-1", "protein_name": "Dynamin-3", "gene_name": "DNM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NHL2-1", "protein_name": "Tubulin alpha chain-like 3", "gene_name": "TUBAL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY65-1", "protein_name": "Tubulin alpha-8 chain", "gene_name": "TUBA8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53680-1", "protein_name": "AP-2 complex subunit sigma", "gene_name": "AP2S1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94973-1", "protein_name": "AP-2 complex subunit alpha-2", "gene_name": "AP2A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60709-1", "protein_name": "Actin, cytoplasmic 1", "gene_name": "ACTB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99962-1", "protein_name": "Endophilin-A1", "gene_name": "SH3GL2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P32004", "url": "https://www.uniprot.org/uniprotkb/P32004" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10747093", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 48 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 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"CSNK2A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26038-1", "protein_name": "Moesin", "gene_name": "MSN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49757-1", "protein_name": "Protein numb homolog", "gene_name": "NUMB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UK32-1", "protein_name": "Ribosomal protein S6 kinase alpha-6", "gene_name": "RPS6KA6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95239-1", "protein_name": "Chromosome-associated kinesin KIF4A", "gene_name": "KIF4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2VIQ3-1", "protein_name": "Chromosome-associated kinesin KIF4B", "gene_name": "KIF4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NNZ2-1", "protein_name": "Tubulin beta 8B", "gene_name": "TUBB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3ZCM7-1", "protein_name": "Tubulin beta-8 chain", "gene_name": "TUBB8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08514-1", "protein_name": "Integrin alpha-IIb", "gene_name": "ITGA2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06756-1", "protein_name": "Integrin alpha-V", "gene_name": "ITGAV", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08648-1", "protein_name": "Integrin alpha-5", "gene_name": "ITGA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00610-1", "protein_name": "Clathrin heavy chain 1", "gene_name": "CLTC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15418-1", "protein_name": "Ribosomal protein S6 kinase alpha-1", "gene_name": "RPS6KA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52735-1", "protein_name": "Guanine nucleotide exchange factor VAV2", "gene_name": "VAV2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63010-1", "protein_name": "AP-2 complex subunit beta", "gene_name": "AP2B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63261-1", "protein_name": "Actin, cytoplasmic 2", "gene_name": "ACTG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50570-1", "protein_name": "Dynamin-2", "gene_name": "DNM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63000-1", "protein_name": "Ras-related C3 botulinum toxin substrate 1", "gene_name": "RAC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96CW1-1", "protein_name": "AP-2 complex subunit mu", "gene_name": "AP2M1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05556-1", "protein_name": "Integrin beta-1", "gene_name": "ITGB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14786-1", "protein_name": "Neuropilin-1", "gene_name": "NRP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0MZ66-1", "protein_name": "Shootin-1", "gene_name": "SHTN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05106-1", "protein_name": "Integrin beta-3", "gene_name": "ITGB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02750-1", "protein_name": "Dual specificity mitogen-activated protein kinase kinase 1", "gene_name": "MAP2K1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09496-1", "protein_name": "Clathrin light chain A", "gene_name": "CLTA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13797-1", "protein_name": "Integrin alpha-9", "gene_name": "ITGA9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35241-1", "protein_name": "Radixin", "gene_name": "RDX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H853-1", "protein_name": "Tubulin-like protein alpha-4B", "gene_name": "TUBA4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13591-2", "protein_name": "Neural cell adhesion molecule 1", "gene_name": "NCAM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68400-1", "protein_name": "Casein kinase II subunit alpha", "gene_name": "CSNK2A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15311-1", "protein_name": "Ezrin", "gene_name": "EZR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P67870-1", "protein_name": "Casein kinase II subunit beta", "gene_name": "CSNK2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27361-1", "protein_name": "Mitogen-activated protein kinase 3", "gene_name": "MAPK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q05193-1", "protein_name": "Dynamin-1", "gene_name": "DNM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16555-1", "protein_name": "Dihydropyrimidinase-related protein 2", "gene_name": "DPYSL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UQ16-1", "protein_name": "Dynamin-3", "gene_name": "DNM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NHL2-1", "protein_name": "Tubulin alpha chain-like 3", "gene_name": "TUBAL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY65-1", "protein_name": "Tubulin alpha-8 chain", "gene_name": "TUBA8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53680-1", "protein_name": "AP-2 complex subunit sigma", "gene_name": "AP2S1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94973-1", "protein_name": "AP-2 complex subunit alpha-2", "gene_name": "AP2A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00533-1", "protein_name": "Epidermal growth factor receptor", "gene_name": "EGFR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60709-1", "protein_name": "Actin, cytoplasmic 1", "gene_name": "ACTB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99962-1", "protein_name": "Endophilin-A1", "gene_name": "SH3GL2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P32004", "url": "https://www.uniprot.org/uniprotkb/P32004" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10818153", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 66 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Homo-oligomer formation by basigin, an immunoglobulin superfamily member, via its N-terminal immunoglobulin domain.", "journal": "European journal of biochemistry", "date": "2000", "authors": "Yoshida S, Shibata M, Yamamoto S, Hagihara M, Asai N, Takahashi M, Mizutani S, Muramatsu T, Kadomatsu K", "reference": { "type": "PubMed", "id": "10880960", "url": "https://pubmed.ncbi.nlm.nih.gov/10880960" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32004-1", "protein_name": "Neural cell adhesion molecule L1", "gene_name": "L1CAM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UM01-1", "protein_name": "Y+L amino acid transporter 1", "gene_name": "SLC7A7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92536-1", "protein_name": "Y+L amino acid transporter 2", "gene_name": "SLC7A6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q03135-1", "protein_name": "Caveolin-1", "gene_name": "CAV1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P03956-1", "protein_name": "Interstitial collagenase", "gene_name": "MMP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35613-1", "protein_name": "Basigin", "gene_name": "BSG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14415-1", "protein_name": "Sodium/potassium-transporting ATPase subunit beta-2", "gene_name": "ATP1B2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05026-1", "protein_name": "Sodium/potassium-transporting ATPase subunit beta-1", "gene_name": "ATP1B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54709-1", "protein_name": "Sodium/potassium-transporting ATPase subunit beta-3", "gene_name": "ATP1B3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P82251-1", "protein_name": "b(0,+)-type amino acid transporter 1", "gene_name": "SLC7A9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPY5-1", "protein_name": "Cystine/glutamate transporter", "gene_name": "SLC7A11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13356-1", "protein_name": "RING-type E3 ubiquitin-protein ligase PPIL2", "gene_name": "PPIL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62937-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A", "gene_name": "PPIA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHI5-1", "protein_name": "Large neutral amino acids transporter small subunit 2", "gene_name": "SLC7A8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26006-2", "protein_name": "Integrin alpha-3", "gene_name": "ITGA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01650-1", "protein_name": "Large neutral amino acids transporter small subunit 1", "gene_name": "SLC7A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20916-1", "protein_name": "Myelin-associated glycoprotein", "gene_name": "MAG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NS82-1", "protein_name": "Asc-type amino acid transporter 1", "gene_name": "SLC7A10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08195-2", "protein_name": "Amino acid transporter heavy chain SLC3A2", "gene_name": "SLC3A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05556-1", "protein_name": "Integrin beta-1", "gene_name": "ITGB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15427-1", "protein_name": "Monocarboxylate transporter 4", "gene_name": "SLC16A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53985-1", "protein_name": "Monocarboxylate transporter 1", "gene_name": "SLC16A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23229-1", "protein_name": "Integrin alpha-6", "gene_name": "ITGA6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16150-1", "protein_name": "Leukosialin", "gene_name": "SPN", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95907-1", "protein_name": "Monocarboxylate transporter 3", "gene_name": "SLC16A8", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P32004", "url": "https://www.uniprot.org/uniprotkb/P32004" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10880960", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 25 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "CD147 is tightly associated with lactate transporters MCT1 and MCT4 and facilitates their cell surface expression.", "journal": "The EMBO journal", "date": "2000", "authors": "Kirk P, Wilson MC, Heddle C, Brown MH, Barclay AN, Halestrap AP", "reference": { "type": "PubMed", "id": "10921872", "url": "https://pubmed.ncbi.nlm.nih.gov/10921872" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32004-1", "protein_name": "Neural cell adhesion molecule L1", "gene_name": "L1CAM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UM01-1", "protein_name": "Y+L amino acid transporter 1", "gene_name": "SLC7A7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92536-1", "protein_name": "Y+L amino acid transporter 2", "gene_name": "SLC7A6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q03135-1", "protein_name": "Caveolin-1", "gene_name": "CAV1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P03956-1", "protein_name": "Interstitial collagenase", "gene_name": "MMP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35613-1", "protein_name": "Basigin", "gene_name": "BSG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14415-1", "protein_name": "Sodium/potassium-transporting ATPase subunit beta-2", "gene_name": "ATP1B2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05026-1", "protein_name": "Sodium/potassium-transporting ATPase subunit beta-1", "gene_name": "ATP1B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54709-1", "protein_name": "Sodium/potassium-transporting ATPase subunit beta-3", "gene_name": "ATP1B3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P82251-1", "protein_name": "b(0,+)-type amino acid transporter 1", "gene_name": "SLC7A9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPY5-1", "protein_name": "Cystine/glutamate transporter", "gene_name": "SLC7A11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13356-1", "protein_name": "RING-type E3 ubiquitin-protein ligase PPIL2", "gene_name": "PPIL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62937-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A", "gene_name": "PPIA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHI5-1", "protein_name": "Large neutral amino acids transporter small subunit 2", "gene_name": "SLC7A8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26006-2", "protein_name": "Integrin alpha-3", "gene_name": "ITGA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01650-1", "protein_name": "Large 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}, { "uniprot_canonical_ac": "P23229-1", "protein_name": "Integrin alpha-6", "gene_name": "ITGA6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16150-1", "protein_name": "Leukosialin", "gene_name": "SPN", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95907-1", "protein_name": "Monocarboxylate transporter 3", "gene_name": "SLC16A8", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P32004", "url": "https://www.uniprot.org/uniprotkb/P32004" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10921872", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 26 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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"uniprot_canonical_ac": "Q07699-1", "protein_name": "Sodium channel regulatory subunit beta-1", "gene_name": "SCN1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15858-1", "protein_name": "Sodium channel protein type 9 subunit alpha", "gene_name": "SCN9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01118-1", "protein_name": "Sodium channel protein type 7 subunit alpha", "gene_name": "SCN7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60939-1", "protein_name": "Sodium channel regulatory subunit beta-2", "gene_name": "SCN2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35499-1", "protein_name": "Sodium channel protein type 4 subunit alpha", "gene_name": "SCN4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY46-1", "protein_name": "Sodium channel protein type 3 subunit alpha", "gene_name": "SCN3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99250-1", "protein_name": "Sodium channel protein type 2 subunit alpha", "gene_name": "SCN2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UI33-1", "protein_name": "Sodium channel protein type 11 subunit alpha", "gene_name": "SCN11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UQD0-1", "protein_name": "Sodium channel protein type 8 subunit alpha", "gene_name": "SCN8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWT1-1", "protein_name": "Sodium channel regulatory subunit beta-4", "gene_name": "SCN4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5Y9-1", "protein_name": "Sodium channel protein type 10 subunit alpha", "gene_name": "SCN10A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY72-1", "protein_name": "Sodium channel regulatory subunit beta-3", "gene_name": "SCN3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16157-1", "protein_name": "Ankyrin-1", "gene_name": "ANK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01484-4", "protein_name": "Ankyrin-2", "gene_name": "ANK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12955-3", "protein_name": "Ankyrin-3", "gene_name": "ANK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92823-1", "protein_name": "Neuronal cell adhesion molecule", "gene_name": "NRCAM", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43525-1", "protein_name": "Potassium voltage-gated channel subfamily KQT member 3", "gene_name": "KCNQ3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35498-1", "protein_name": "Sodium channel protein type 1 subunit alpha", "gene_name": "SCN1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01082-1", "protein_name": "Spectrin beta chain, non-erythrocytic 1", "gene_name": "SPTBN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H254-1", "protein_name": "Spectrin beta chain, non-erythrocytic 4", "gene_name": "SPTBN4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11277-1", "protein_name": "Spectrin beta chain, erythrocytic", "gene_name": "SPTB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRC6-1", "protein_name": "Spectrin beta chain, non-erythrocytic 5", "gene_name": "SPTBN5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02549-1", "protein_name": "Spectrin alpha chain, erythrocytic 1", "gene_name": "SPTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63261-1", "protein_name": "Actin, cytoplasmic 2", "gene_name": "ACTG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14524-1", "protein_name": "Sodium channel protein type 5 subunit alpha", "gene_name": "SCN5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94856-1", "protein_name": "Neurofascin", "gene_name": "NFASC", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15020-1", "protein_name": "Spectrin beta chain, non-erythrocytic 2", "gene_name": "SPTBN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13813-1", "protein_name": "Spectrin alpha chain, non-erythrocytic 1", "gene_name": "SPTAN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43526-1", "protein_name": "Potassium voltage-gated channel subfamily KQT member 2", "gene_name": "KCNQ2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60709-1", "protein_name": "Actin, cytoplasmic 1", "gene_name": "ACTB", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P32004", "url": "https://www.uniprot.org/uniprotkb/P32004" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11222639", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 31 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", 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}, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Fluorescence resonance energy transfer studies on the interaction between the lactate transporter MCT1 and CD147 provide information on the topology and stoichiometry of the complex in situ.", "journal": "The Journal of biological chemistry", "date": "2002", "authors": "Wilson MC, Meredith D, Halestrap AP", "reference": { "type": "PubMed", "id": "11719518", "url": "https://pubmed.ncbi.nlm.nih.gov/11719518" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32004-1", "protein_name": "Neural cell adhesion molecule L1", "gene_name": "L1CAM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UM01-1", "protein_name": "Y+L amino acid transporter 1", "gene_name": "SLC7A7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92536-1", "protein_name": "Y+L amino acid transporter 2", "gene_name": "SLC7A6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q03135-1", "protein_name": "Caveolin-1", "gene_name": "CAV1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53987-1", "protein_name": "Monocarboxylate transporter 1", "gene_name": "Slc16a1", "tax_name": "Rat" }, { "uniprot_canonical_ac": "P03956-1", "protein_name": "Interstitial collagenase", "gene_name": "MMP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35613-1", "protein_name": "Basigin", "gene_name": "BSG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14415-1", "protein_name": "Sodium/potassium-transporting ATPase subunit beta-2", "gene_name": "ATP1B2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05026-1", "protein_name": "Sodium/potassium-transporting ATPase subunit beta-1", "gene_name": "ATP1B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54709-1", "protein_name": "Sodium/potassium-transporting ATPase subunit beta-3", "gene_name": "ATP1B3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P82251-1", "protein_name": "b(0,+)-type amino acid transporter 1", "gene_name": "SLC7A9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPY5-1", "protein_name": "Cystine/glutamate transporter", "gene_name": "SLC7A11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13356-1", "protein_name": "RING-type E3 ubiquitin-protein ligase PPIL2", "gene_name": "PPIL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62937-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A", "gene_name": "PPIA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHI5-1", "protein_name": "Large neutral amino acids transporter small subunit 2", "gene_name": "SLC7A8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26006-2", "protein_name": "Integrin alpha-3", "gene_name": "ITGA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01650-1", "protein_name": "Large neutral amino acids transporter small subunit 1", "gene_name": "SLC7A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20916-1", "protein_name": "Myelin-associated glycoprotein", "gene_name": "MAG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26453-1", "protein_name": "Basigin", "gene_name": "Bsg", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q9NS82-1", "protein_name": "Asc-type amino acid transporter 1", "gene_name": "SLC7A10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08195-2", "protein_name": "Amino acid transporter heavy chain SLC3A2", "gene_name": "SLC3A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05556-1", "protein_name": "Integrin beta-1", "gene_name": "ITGB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15427-1", "protein_name": "Monocarboxylate transporter 4", "gene_name": "SLC16A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53985-1", "protein_name": "Monocarboxylate transporter 1", "gene_name": "SLC16A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23229-1", "protein_name": "Integrin alpha-6", "gene_name": "ITGA6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16150-1", "protein_name": "Leukosialin", "gene_name": "SPN", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95907-1", "protein_name": "Monocarboxylate transporter 3", "gene_name": "SLC16A8", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P32004", "url": "https://www.uniprot.org/uniprotkb/P32004" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11719518", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 27 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", 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HSAS represents the severe end of the spectrum and is associated with poor prognosis." }, { "id": "MONDO:0010611", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010611", "name": "Bickers-Adams syndrome", "description": "" }, { "id": "MONDO:0010611", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010611", "name": "HSAS", "description": "" }, { "id": "MONDO:0010611", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010611", "name": "X-linked HSAS", "description": "" }, { "id": "MONDO:0010611", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010611", "name": "X-linked acqueductal stenosis", "description": "" }, { "id": "MONDO:0010611", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010611", "name": "X-linked hydrocephalus", "description": "" }, { "id": "MONDO:0010611", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010611", "name": 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"https://monarchinitiative.org/disease/MONDO:0010611", "name": "hydrocephalus with stenosis of the aqueduct of Sylvius", "description": "" }, { "id": "MONDO:0010611", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010611", "name": "HSAS1", "description": "" }, { "id": "MONDO:0010611", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010611", "name": "HYCX", "description": "" }, { "id": "MONDO:0010611", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010611", "name": "XLAS", "description": "" }, { "id": "MONDO:0010611", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010611", "name": "hydrocephalus due to congenital stenosis of aqueduct of Sylvius", "description": "" }, { "id": "MIM:307000", "resource": "MIM", "url": "https://www.omim.org/entry/307000", "name": "Hydrocephalus, congenital, X-linked", "description": "Hydrocephalus, congenital, X-linked" } ], "unlinked_id_list": [], 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"uniprot_canonical_ac": "O95239-1", "protein_name": "Chromosome-associated kinesin KIF4A", "gene_name": "KIF4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2VIQ3-1", "protein_name": "Chromosome-associated kinesin KIF4B", "gene_name": "KIF4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NNZ2-1", "protein_name": "Tubulin beta 8B", "gene_name": "TUBB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3ZCM7-1", "protein_name": "Tubulin beta-8 chain", "gene_name": "TUBB8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00610-1", "protein_name": "Clathrin heavy chain 1", "gene_name": "CLTC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15418-1", "protein_name": "Ribosomal protein S6 kinase alpha-1", "gene_name": "RPS6KA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63010-1", "protein_name": "AP-2 complex subunit beta", "gene_name": "AP2B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63261-1", "protein_name": "Actin, cytoplasmic 2", "gene_name": "ACTG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50570-1", "protein_name": "Dynamin-2", "gene_name": "DNM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96CW1-1", "protein_name": "AP-2 complex subunit mu", "gene_name": "AP2M1", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0MZ66-1", "protein_name": "Shootin-1", "gene_name": "SHTN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09496-1", "protein_name": "Clathrin light chain A", "gene_name": "CLTA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35241-1", "protein_name": "Radixin", "gene_name": "RDX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H853-1", "protein_name": "Tubulin-like protein alpha-4B", "gene_name": "TUBA4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15311-1", "protein_name": "Ezrin", "gene_name": "EZR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q05193-1", "protein_name": "Dynamin-1", "gene_name": "DNM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16555-1", "protein_name": "Dihydropyrimidinase-related protein 2", "gene_name": "DPYSL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UQ16-1", "protein_name": "Dynamin-3", "gene_name": "DNM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NHL2-1", "protein_name": "Tubulin alpha chain-like 3", "gene_name": "TUBAL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY65-1", "protein_name": "Tubulin alpha-8 chain", "gene_name": "TUBA8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53680-1", "protein_name": "AP-2 complex subunit sigma", "gene_name": "AP2S1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94973-1", "protein_name": "AP-2 complex subunit alpha-2", "gene_name": "AP2A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60709-1", "protein_name": "Actin, cytoplasmic 1", "gene_name": "ACTB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99962-1", "protein_name": "Endophilin-A1", "gene_name": "SH3GL2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P32004", "url": "https://www.uniprot.org/uniprotkb/P32004" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 1176, "end_pos": 1176, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "", "evidence": [ { "database": "PRO", "id": "P32004", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=P32004" }, { "database": "iPTMnet", "id": "P32004", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P32004" }, { "database": "PubMed", "id": "12082080", "url": "https://pubmed.ncbi.nlm.nih.gov/12082080" } ], "site_lbl": "Tyr1176", "uniprot_canonical_ac": "P32004-1" } ], "record_id": "pubmed.12082080", "abstract": "", "glycosylation": 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Johansen J, Berg B", "reference": { "type": "PubMed", "id": "12435569", "url": "https://pubmed.ncbi.nlm.nih.gov/12435569" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32004-1", "protein_name": "Neural cell adhesion molecule L1", "gene_name": "L1CAM", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P32004", "url": "https://www.uniprot.org/uniprotkb/P32004" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12435569", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], 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}, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Cis and trans interactions of L1 with neuropilin-1 control axonal responses to semaphorin 3A.", "journal": "The EMBO journal", "date": "2002", "authors": "Castellani V, De Angelis E, Kenwrick S, Rougon G", "reference": { "type": "PubMed", "id": "12456642", "url": "https://pubmed.ncbi.nlm.nih.gov/12456642" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32004-1", "protein_name": "Neural cell adhesion molecule L1", "gene_name": "L1CAM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28482-1", "protein_name": "Mitogen-activated protein kinase 1", "gene_name": "MAPK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13153-1", "protein_name": "Serine/threonine-protein kinase PAK 1", "gene_name": "PAK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P36507-1", "protein_name": "Dual specificity mitogen-activated protein kinase kinase 2", "gene_name": "MAP2K2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19784-1", "protein_name": "Casein kinase II subunit alpha'", "gene_name": "CSNK2A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08514-1", "protein_name": "Integrin alpha-IIb", "gene_name": "ITGA2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06756-1", "protein_name": "Integrin alpha-V", "gene_name": "ITGAV", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08648-1", "protein_name": "Integrin alpha-5", "gene_name": "ITGA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52735-1", "protein_name": "Guanine nucleotide exchange factor VAV2", "gene_name": "VAV2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63000-1", "protein_name": 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"uniprot_canonical_ac": "P67870-1", "protein_name": "Casein kinase II subunit beta", "gene_name": "CSNK2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27361-1", "protein_name": "Mitogen-activated protein kinase 3", "gene_name": "MAPK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00533-1", "protein_name": "Epidermal growth factor receptor", "gene_name": "EGFR", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P32004", "url": "https://www.uniprot.org/uniprotkb/P32004" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12456642", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 20 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, 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"uniprot_canonical_ac": "P82251-1", "protein_name": "b(0,+)-type amino acid transporter 1", "gene_name": "SLC7A9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPY5-1", "protein_name": "Cystine/glutamate transporter", "gene_name": "SLC7A11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13356-1", "protein_name": "RING-type E3 ubiquitin-protein ligase PPIL2", "gene_name": "PPIL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62937-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A", "gene_name": "PPIA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHI5-1", "protein_name": "Large neutral amino acids transporter small subunit 2", "gene_name": "SLC7A8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26006-2", "protein_name": "Integrin alpha-3", "gene_name": "ITGA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01650-1", "protein_name": "Large neutral amino acids transporter small subunit 1", "gene_name": "SLC7A5", "tax_name": "Human" }, { 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"o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Ankyrin binding mediates L1CAM interactions with static components of the cytoskeleton and inhibits retrograde movement of L1CAM on the cell surface.", "journal": "The Journal of cell biology", "date": "2003", "authors": "Gil OD, Sakurai T, Bradley AE, Fink MY, Cassella MR, Kuo JA, Felsenfeld DP", "reference": { "type": "PubMed", "id": "12925712", "url": "https://pubmed.ncbi.nlm.nih.gov/12925712" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32004-1", "protein_name": "Neural cell adhesion molecule L1", "gene_name": "L1CAM", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P32004", "url": "https://www.uniprot.org/uniprotkb/P32004" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 1229, "end_pos": 1229, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "", "evidence": [ { "database": "PRO", "id": "P32004", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=P32004" }, { "database": "iPTMnet", "id": "P32004", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P32004" }, { "database": "PubMed", "id": "12925712", "url": "https://pubmed.ncbi.nlm.nih.gov/12925712" } ], "site_lbl": "Tyr1229", "uniprot_canonical_ac": "P32004-1" } ], "record_id": "pubmed.12925712", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", 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Carninci P, Piao Y, Dudekula DB, Ko MS, Kawakami K, Suzuki Y, Sugano S, Gruber CE, Smith MR, Simmons B, Moore T, Waterman R, Johnson SL, Ruan Y, Wei CL, Mathavan S, Gunaratne PH, Wu J, Garcia AM, Hulyk SW, Fuh E, Yuan Y, Sneed A, Kowis C, Hodgson A, Muzny DM, McPherson J, Gibbs RA, Fahey J, Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M, Madari A, Young AC, Wetherby KD, Granite SJ, Kwong PN, Brinkley CP, Pearson RL, Bouffard GG, Blakesly RW, Green ED, Dickson MC, Rodriguez AC, Grimwood J, Schmutz J, Myers RM, Butterfield YS, Griffith M, Griffith OL, Krzywinski MI, Liao N, Morin R, Palmquist D, Petrescu AS, Skalska U, Smailus DE, Stott JM, Schnerch A, Schein JE, Jones SJ, Holt RA, Baross A, Marra MA, Clifton S, Makowski KA, Bosak S, Malek J", "reference": { "type": "PubMed", "id": "15489334", "url": "https://pubmed.ncbi.nlm.nih.gov/15489334" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32004-1", "protein_name": "Neural cell adhesion 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"ITLN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWA0-1", "protein_name": "Intelectin-1", "gene_name": "ITLN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6UX15-1", "protein_name": "Layilin", "gene_name": "LAYN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35247-1", "protein_name": "Pulmonary surfactant-associated protein D", "gene_name": "SFTPD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02741-1", "protein_name": "C-reactive protein", "gene_name": "CRP", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75636-1", "protein_name": "Ficolin-3", "gene_name": "FCN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCL4-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 6", "gene_name": "GALNT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCQ5-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 9", "gene_name": "GALNT9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q10472-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 1", "gene_name": "GALNT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY28-1", "protein_name": "Probable polypeptide N-acetylgalactosaminyltransferase 8", "gene_name": "GALNT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IS24-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 17", "gene_name": "GALNT17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z7M9-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 5", "gene_name": "GALNT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q10471-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 2", "gene_name": "GALNT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4A0-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 4", "gene_name": "GALNT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00182-1", "protein_name": "Galectin-9", "gene_name": "LGALS9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56470-1", "protein_name": "Galectin-4", "gene_name": "LGALS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P47929-1", "protein_name": "Galectin-7", "gene_name": "LGALS7B; LGALS7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20916-1", "protein_name": "Myelin-associated glycoprotein", "gene_name": "MAG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06141-1", "protein_name": "Regenerating islet-derived protein 3-alpha", "gene_name": "REG3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXN2-1", "protein_name": "C-type lectin domain family 7 member A", "gene_name": "CLEC7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27824-1", "protein_name": "Calnexin", "gene_name": "CANX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9DAM2-1", "protein_name": "EF-hand calcium-binding domain-containing protein 9", "gene_name": "Efcab9", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O14967-1", "protein_name": "Calmegin", "gene_name": "CLGN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BWP8-1", "protein_name": "Collectin-11", "gene_name": "COLEC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5KU26-1", "protein_name": "Collectin-12", "gene_name": "COLEC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N539-1", "protein_name": "Fibrinogen C domain-containing protein 1", "gene_name": "FIBCD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DZ1-1", "protein_name": "Endoplasmic reticulum lectin 1", "gene_name": "ERLEC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UK22-1", "protein_name": "F-box only protein 2", "gene_name": "FBXO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43699-1", "protein_name": "Sialic acid-binding Ig-like lectin 6", "gene_name": "SIGLEC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCW6-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 11", "gene_name": "GALNT11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SF2-1", "protein_name": "N-acetylgalactosaminyltransferase 7", "gene_name": "GALNT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUC8-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 13", "gene_name": "GALNT13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FL9-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 14", "gene_name": "GALNT14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04155-1", "protein_name": "Trefoil factor 1", "gene_name": "TFF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22897-1", "protein_name": "Macrophage mannose receptor 1", "gene_name": "MRC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15389-1", "protein_name": "Sialic acid-binding Ig-like lectin 5", "gene_name": "SIGLEC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96GW7-1", "protein_name": "Brevican core protein", "gene_name": "BCAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13727-1", "protein_name": "Bone marrow proteoglycan", "gene_name": "PRG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60844-1", "protein_name": "Zymogen granule membrane protein 16", "gene_name": "ZG16", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09382-1", "protein_name": "Galectin-1", "gene_name": "LGALS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17931-1", "protein_name": "Galectin-3", "gene_name": "LGALS3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6UXB4-1", "protein_name": "C-type lectin domain family 4 member G", "gene_name": "CLEC4G", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6EIG7-1", "protein_name": "C-type lectin domain family 6 member A", "gene_name": "CLEC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ71-1", "protein_name": "C-type lectin domain family 4 member K", "gene_name": "CD207", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q49A17-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase-like 6", "gene_name": "GALNTL6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N3T1-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 15", "gene_name": "GALNT15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16581-1", "protein_name": "E-selectin", "gene_name": "SELE", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20645-1", "protein_name": "Cation-dependent mannose-6-phosphate receptor", "gene_name": "M6PR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14165-1", "protein_name": "Malectin", "gene_name": "MLEC", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00602-1", "protein_name": "Ficolin-1", "gene_name": "FCN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15485-1", "protein_name": "Ficolin-2", "gene_name": "FCN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q03403-1", "protein_name": "Trefoil factor 2", "gene_name": "TFF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DA0-1", "protein_name": "Pancreatic adenocarcinoma up-regulated factor", "gene_name": "ZG16B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00214-1", "protein_name": "Galectin-8", "gene_name": "LGALS8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27797-1", "protein_name": "Calreticulin", "gene_name": "CALR", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P32004", "url": "https://www.uniprot.org/uniprotkb/P32004" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15489334", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 99 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", 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Waldron L, Wall M, Wang Q, Warren J, Warry GL, Wei X, West A, Whitehead SL, Whiteley MN, Wilkinson JE, Willey DL, Williams G, Williams L, Williamson A, Williamson H, Wilming L, Woodmansey RL, Wray PW, Yen J, Zhang J, Zhou J, Zoghbi H, Zorilla S, Buck D, Reinhardt R, Poustka A, Rosenthal A, Lehrach H, Meindl A, Minx PJ, Hillier LW, Willard HF, Wilson RK, Waterston RH, Rice CM, Vaudin M, Coulson A, Nelson DL, Weinstock G, Sulston JE, Durbin R, Hubbard T, Gibbs RA, Beck S, Rogers J, Bentley DR", "reference": { "type": "PubMed", "id": "15772651", "url": "https://pubmed.ncbi.nlm.nih.gov/15772651" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32004-1", "protein_name": "Neural cell adhesion molecule L1", "gene_name": "L1CAM", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P32004", "url": "https://www.uniprot.org/uniprotkb/P32004" } ], "common_name": "Human", "glygen_name": 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"journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2005", "authors": "Deora AA, Philp N, Hu J, Bok D, Rodriguez-Boulan E", "reference": { "type": "PubMed", "id": "16260747", "url": "https://pubmed.ncbi.nlm.nih.gov/16260747" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32004-1", "protein_name": "Neural cell adhesion molecule L1", "gene_name": "L1CAM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UM01-1", "protein_name": "Y+L amino acid transporter 1", "gene_name": "SLC7A7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92536-1", "protein_name": "Y+L amino acid transporter 2", "gene_name": "SLC7A6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q03135-1", "protein_name": "Caveolin-1", "gene_name": "CAV1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P03956-1", "protein_name": "Interstitial collagenase", "gene_name": "MMP1", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H853-1", "protein_name": "Tubulin-like protein alpha-4B", "gene_name": "TUBA4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15311-1", "protein_name": "Ezrin", "gene_name": "EZR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q05193-1", "protein_name": "Dynamin-1", "gene_name": "DNM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16555-1", "protein_name": "Dihydropyrimidinase-related protein 2", "gene_name": "DPYSL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UQ16-1", "protein_name": "Dynamin-3", "gene_name": "DNM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NHL2-1", "protein_name": "Tubulin alpha chain-like 3", "gene_name": "TUBAL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY65-1", "protein_name": "Tubulin alpha-8 chain", "gene_name": "TUBA8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53680-1", "protein_name": "AP-2 complex subunit sigma", "gene_name": "AP2S1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94973-1", "protein_name": "AP-2 complex subunit alpha-2", "gene_name": "AP2A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60709-1", "protein_name": "Actin, cytoplasmic 1", "gene_name": "ACTB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99962-1", "protein_name": "Endophilin-A1", "gene_name": "SH3GL2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P32004", "url": "https://www.uniprot.org/uniprotkb/P32004" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.16330023", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 48 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "MAP kinase pathway-dependent phosphorylation of the L1-CAM ankyrin binding site regulates neuronal growth.", "journal": "Molecular biology of the cell", "date": "2006", "authors": "Whittard JD, Sakurai T, Cassella MR, Gazdoiu M, Felsenfeld DP", "reference": { "type": "PubMed", "id": "16597699", "url": "https://pubmed.ncbi.nlm.nih.gov/16597699" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32004-1", "protein_name": "Neural cell adhesion molecule L1", "gene_name": "L1CAM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07699-1", "protein_name": "Sodium channel regulatory subunit beta-1", "gene_name": "SCN1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15858-1", "protein_name": "Sodium channel protein type 9 subunit alpha", "gene_name": "SCN9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01118-1", "protein_name": "Sodium channel protein type 7 subunit alpha", "gene_name": "SCN7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60939-1", "protein_name": "Sodium channel regulatory subunit beta-2", "gene_name": "SCN2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35499-1", "protein_name": "Sodium channel protein type 4 subunit alpha", "gene_name": "SCN4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY46-1", "protein_name": "Sodium channel protein type 3 subunit alpha", "gene_name": "SCN3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99250-1", "protein_name": "Sodium channel protein type 2 subunit alpha", "gene_name": "SCN2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UI33-1", "protein_name": "Sodium channel protein type 11 subunit alpha", "gene_name": "SCN11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UQD0-1", "protein_name": "Sodium channel protein type 8 subunit alpha", "gene_name": "SCN8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWT1-1", "protein_name": "Sodium channel regulatory subunit beta-4", "gene_name": "SCN4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5Y9-1", "protein_name": "Sodium channel protein type 10 subunit alpha", "gene_name": "SCN10A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY72-1", "protein_name": "Sodium channel regulatory subunit beta-3", "gene_name": "SCN3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16157-1", "protein_name": "Ankyrin-1", "gene_name": "ANK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01484-4", "protein_name": "Ankyrin-2", "gene_name": "ANK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12955-3", "protein_name": "Ankyrin-3", "gene_name": "ANK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92823-1", "protein_name": "Neuronal cell adhesion molecule", "gene_name": "NRCAM", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43525-1", "protein_name": "Potassium voltage-gated channel subfamily KQT member 3", "gene_name": "KCNQ3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35498-1", "protein_name": "Sodium channel protein type 1 subunit alpha", "gene_name": "SCN1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01082-1", "protein_name": "Spectrin beta chain, non-erythrocytic 1", "gene_name": "SPTBN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H254-1", "protein_name": "Spectrin beta chain, non-erythrocytic 4", "gene_name": "SPTBN4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11277-1", "protein_name": "Spectrin beta chain, erythrocytic", "gene_name": "SPTB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRC6-1", "protein_name": "Spectrin beta chain, non-erythrocytic 5", "gene_name": "SPTBN5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02549-1", "protein_name": "Spectrin alpha chain, erythrocytic 1", "gene_name": "SPTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63261-1", "protein_name": "Actin, cytoplasmic 2", "gene_name": "ACTG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14524-1", "protein_name": "Sodium channel protein type 5 subunit alpha", "gene_name": "SCN5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94856-1", "protein_name": "Neurofascin", "gene_name": "NFASC", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15020-1", "protein_name": "Spectrin beta chain, non-erythrocytic 2", "gene_name": "SPTBN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13813-1", "protein_name": "Spectrin alpha chain, non-erythrocytic 1", "gene_name": "SPTAN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43526-1", "protein_name": "Potassium voltage-gated channel subfamily KQT member 2", "gene_name": "KCNQ2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60709-1", "protein_name": "Actin, cytoplasmic 1", "gene_name": "ACTB", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P32004", "url": "https://www.uniprot.org/uniprotkb/P32004" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.16597699", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 31 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Expanding the phenotypic spectrum of L1CAM-associated disease.", "journal": "Clinical genetics", "date": "2006", "authors": "Basel-Vanagaite L, Straussberg R, Friez MJ, Inbar D, Korenreich L, Shohat M, Schwartz CE", "reference": { "type": 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Representative examples include carcinoma, lymphoma, and sarcoma." }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "cancer of colorectum", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "cancer of large bowel", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "cancer of large intestine", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "cancer of the large bowel", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "colon cancer, advanced, somatic", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": 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Additional features include stenosis of the aqueduct of Sylvius, adducted thumbs, spastic paraparesis and impaired intellectual development." }, "synonyms": [ { "id": "DOID:0070686", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0070686", "name": "X-linked hydrocephalus", "description": "" }, { "id": "MONDO:0010611", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010611", "name": "X-linked hydrocephalus with stenosis of the aqueduct of Sylvius", "description": "A form of L1 syndrome caused by changes in the L1CAM gene characterized by severe hydrocephalus mostly with prenatal onset, signs of intracranial hypertension, adducted thumbs, spasticity, and severe intellectual deficit. 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"https://monarchinitiative.org/disease/MONDO:0010611", "name": "hydrocephalus with stenosis of the aqueduct of Sylvius", "description": "" }, { "id": "MONDO:0010611", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010611", "name": "HSAS1", "description": "" }, { "id": "MONDO:0010611", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010611", "name": "HYCX", "description": "" }, { "id": "MONDO:0010611", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010611", "name": "XLAS", "description": "" }, { "id": "MONDO:0010611", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010611", "name": "hydrocephalus due to congenital stenosis of aqueduct of Sylvius", "description": "" }, { "id": "MIM:307000", "resource": "MIM", "url": "https://www.omim.org/entry/307000", "name": "Hydrocephalus, congenital, X-linked", "description": "Hydrocephalus, congenital, X-linked" } ], "unlinked_id_list": [], 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[] } ] }, { "title": "X linked complicated spastic paraplegia, MASA syndrome, and X linked hydrocephalus owing to congenital stenosis of the aqueduct of Sylvius: variable expression of the same mutation at Xq28.", "journal": "Journal of medical genetics", "date": "1991-06", "authors": "Fryns J P, Spaepen A, Cassiman J J, van den Berghe H", "reference": { "type": "PubMed", "id": "1870106", "url": "https://pubmed.ncbi.nlm.nih.gov/1870106" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32004-1", "protein_name": "Neural cell adhesion molecule L1", "gene_name": "L1CAM", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P32004", "url": "https://www.uniprot.org/uniprotkb/P32004" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "snv": [ { "evidence": [ { "id": "rs137852523", "database": "dbSNP", "url": 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L1CAM gene on chromosome Xq28. Additional features include stenosis of the aqueduct of Sylvius, adducted thumbs, spastic paraparesis and impaired intellectual development." }, "synonyms": [ { "id": "DOID:0070686", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0070686", "name": "X-linked hydrocephalus", "description": "" }, { "id": "MONDO:0010611", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010611", "name": "X-linked hydrocephalus with stenosis of the aqueduct of Sylvius", "description": "A form of L1 syndrome caused by changes in the L1CAM gene characterized by severe hydrocephalus mostly with prenatal onset, signs of intracranial hypertension, adducted thumbs, spasticity, and severe intellectual deficit. HSAS represents the severe end of the spectrum and is associated with poor prognosis." }, { "id": "MONDO:0010611", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010611", "name": "Bickers-Adams syndrome", "description": "" }, { "id": "MONDO:0010611", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010611", "name": "HSAS", "description": "" }, { "id": "MONDO:0010611", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010611", "name": "X-linked HSAS", "description": "" }, { "id": "MONDO:0010611", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010611", "name": "X-linked acqueductal stenosis", "description": "" }, { "id": "MONDO:0010611", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010611", "name": "X-linked hydrocephalus", "description": "" }, { "id": "MONDO:0010611", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010611", "name": 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{ "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "L1 syndrome diagnosis complemented with functional analysis of L1CAM variants located to the two N-terminal Ig-like domains.", "journal": "Clinical genetics", "date": "2017", "authors": "Christaller WA, Vos Y, Gebre-Medhin S, Hofstra RM, Schafer MK", "reference": { "type": "PubMed", "id": "26891472", "url": "https://pubmed.ncbi.nlm.nih.gov/26891472" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32004-1", "protein_name": "Neural cell adhesion molecule L1", "gene_name": "L1CAM", "tax_name": 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and alpha-1B-Glycoprotein.", "journal": "Analytical chemistry", "date": "2018", "authors": "Sun S, Hu Y, Jia L, Eshghi ST, Liu Y, Shah P, Zhang H", "reference": { "type": "PubMed", "id": "29671580", "url": "https://pubmed.ncbi.nlm.nih.gov/29671580" }, "referenced_glycans": [ { "glytoucan_ac": "G59536GA" }, { "glytoucan_ac": "G59937CP" }, { "glytoucan_ac": "G88725PI" }, { "glytoucan_ac": "G90093AU" }, { "glytoucan_ac": "G59626AS" }, { "glytoucan_ac": "G79568CQ" }, { "glytoucan_ac": "G52527GH" }, { "glytoucan_ac": "G06853GH" }, { "glytoucan_ac": "G82119TF" }, { "glytoucan_ac": "G82463GQ" }, { "glytoucan_ac": "G41882MT" }, { "glytoucan_ac": "G72291OX" }, { "glytoucan_ac": "G72787SB" }, { "glytoucan_ac": "G72791KH" }, { "glytoucan_ac": "G72797UR" }, { "glytoucan_ac": 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"G60033FS" }, { "glytoucan_ac": "G70101JE" }, { "glytoucan_ac": "G70375MX" }, { "glytoucan_ac": "G70822IO" }, { "glytoucan_ac": "G64394MX" }, { "glytoucan_ac": "G64527OM" }, { "glytoucan_ac": "G57317CE" }, { "glytoucan_ac": "G57565TQ" }, { "glytoucan_ac": "G57888GL" }, { "glytoucan_ac": "G58001LT" }, { "glytoucan_ac": "G02030ZB" }, { "glytoucan_ac": "G93683YO" }, { "glytoucan_ac": "G94854LT" }, { "glytoucan_ac": "G94917XT" }, { "glytoucan_ac": "G95865ZB" }, { "glytoucan_ac": "G08293MJ" }, { "glytoucan_ac": "G50045TK" }, { "glytoucan_ac": "G50073PQ" }, { "glytoucan_ac": "G50757KG" }, { "glytoucan_ac": "G29068FM" }, { "glytoucan_ac": "G29651HS" }, { "glytoucan_ac": "G86752LQ" }, { "glytoucan_ac": "G88374WZ" }, { "glytoucan_ac": "G46687AB" }, { "glytoucan_ac": "G47012YE" }, { "glytoucan_ac": "G47518TP" }, { "glytoucan_ac": "G01650EU" }, { "glytoucan_ac": "G72790NZ" }, { "glytoucan_ac": "G03382KH" }, { "glytoucan_ac": "G54992WG" }, { "glytoucan_ac": "G55382TU" }, { "glytoucan_ac": "G00912UN" }, { "glytoucan_ac": "G48414YA" }, { "glytoucan_ac": "G49739MP" }, { "glytoucan_ac": "G49874UX" }, { "glytoucan_ac": "G10256JP" }, { "glytoucan_ac": "G10339FR" }, { "glytoucan_ac": "G11115RO" }, { "glytoucan_ac": "G11254FL" }, { "glytoucan_ac": "G65184UU" }, { "glytoucan_ac": "G85144OK" }, { "glytoucan_ac": "G85740DB" }, { "glytoucan_ac": "G86056PA" }, { "glytoucan_ac": "G86182NS" }, { "glytoucan_ac": "G29880MM" }, { "glytoucan_ac": "G30159WR" }, { "glytoucan_ac": "G45504EY" }, { "glytoucan_ac": "G39188ZX" }, { "glytoucan_ac": "G39213VZ" }, { "glytoucan_ac": "G39446WN" }, { "glytoucan_ac": "G39595FH" }, { "glytoucan_ac": "G62765YT" }, { "glytoucan_ac": "G06247RL" }, { "glytoucan_ac": "G23294PN" }, { "glytoucan_ac": "G23432EQ" }, { "glytoucan_ac": "G23453IV" }, { "glytoucan_ac": "G23505EP" }, { "glytoucan_ac": "G23863VK" }, { "glytoucan_ac": "G57776ZU" }, { "glytoucan_ac": "G17015OC" }, { "glytoucan_ac": "G31596VW" }, { "glytoucan_ac": "G31916IQ" }, { "glytoucan_ac": "G32926LW" }, { "glytoucan_ac": "G37399XV" }, { "glytoucan_ac": "G68318VE" }, { "glytoucan_ac": "G69834CE" } ], "referenced_proteins": [ { "uniprot_canonical_ac": "P32004-1", "protein_name": "Neural cell adhesion molecule L1", "gene_name": "L1CAM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14766-1", "protein_name": "Latent-transforming growth factor beta-binding protein 1", "gene_name": "LTBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2H9-1", "protein_name": "Microtubule-associated serine/threonine-protein kinase 1", "gene_name": "MAST1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51884-1", "protein_name": "Lumican", "gene_name": "LUM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13275-1", "protein_name": "Semaphorin-3F", "gene_name": "SEMA3F", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49908-1", "protein_name": "Selenoprotein P", "gene_name": "SELENOP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35499-1", "protein_name": "Sodium channel protein type 4 subunit alpha", "gene_name": "SCN4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", "protein_name": "Trafficking protein particle complex subunit 8", "gene_name": "TRAPPC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6R2W3-1", "protein_name": "SCAN domain-containing protein 3", "gene_name": "SCAND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14773-1", "protein_name": "Tripeptidyl-peptidase 1", "gene_name": "TPP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00734-1", "protein_name": "Prothrombin", "gene_name": "F2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VUA4-1", "protein_name": "Zinc finger protein 318", "gene_name": "ZNF318", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2P0-1", "protein_name": "Activity-dependent neuroprotector homeobox protein", "gene_name": "ADNP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5H9R7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 3", "gene_name": "PPP6R3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54802-1", "protein_name": "Alpha-N-acetylglucosaminidase", "gene_name": "NAGLU", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43652-1", "protein_name": "Afamin", "gene_name": "AFM", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00468-1", "protein_name": "Agrin", "gene_name": "AGRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NC57-1", "protein_name": "Ankyrin repeat domain-containing protein 62", "gene_name": "ANKRD62", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04114-1", "protein_name": "Apolipoprotein B-100", "gene_name": "APOB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02751-15", "protein_name": "Fibronectin", "gene_name": "FN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z6B7-1", "protein_name": "SLIT-ROBO Rho GTPase-activating protein 1", "gene_name": "SRGAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95445-1", "protein_name": "Apolipoprotein M", "gene_name": "APOM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15144-1", "protein_name": "Aminopeptidase N", "gene_name": "ANPEP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01008-1", "protein_name": "Antithrombin-III", "gene_name": "SERPINC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92484-1", "protein_name": "Cyclic GMP-AMP phosphodiesterase SMPDL3A", "gene_name": "SMPDL3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10909-1", "protein_name": "Clusterin", "gene_name": "CLU", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q63HR2-1", "protein_name": "Tensin-2", "gene_name": "TNS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UQP3-1", "protein_name": "Tenascin-N", "gene_name": "TNN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06681-1", "protein_name": "Complement C2", "gene_name": "C2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08722-1", "protein_name": "Leukocyte surface antigen CD47", "gene_name": "CD47", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01871-2", "protein_name": "Immunoglobulin heavy constant mu", "gene_name": "IGHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02765-1", "protein_name": "Alpha-2-HS-glycoprotein", "gene_name": "AHSG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02679-1", "protein_name": "Fibrinogen gamma chain", "gene_name": "FGG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCE0-1", "protein_name": "Ectopic P granules protein 5 homolog", "gene_name": "EPG5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6R7-1", "protein_name": "IgGFc-binding protein", "gene_name": "FCGBP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05160-1", "protein_name": "Coagulation factor XIII B chain", "gene_name": "F13B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFI4-1", "protein_name": "Putative protein FAM10A5", "gene_name": "ST13P5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2WGJ9-1", "protein_name": "Fer-1-like protein 6", "gene_name": "FER1L6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24394-1", "protein_name": "Interleukin-4 receptor subunit alpha", "gene_name": "IL4R", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29622-1", "protein_name": "Kallistatin", "gene_name": "SERPINA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13201-1", "protein_name": "Multimerin-1", "gene_name": "MMRN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IVL0-1", "protein_name": "Neuron navigator 3", "gene_name": "NAV3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54289-1", "protein_name": "Voltage-dependent calcium channel subunit alpha-2/delta-1", "gene_name": "CACNA2D1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07108-1", "protein_name": "Early activation antigen CD69", "gene_name": "CD69", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5IJ48-1", "protein_name": "Protein crumbs homolog 2", "gene_name": "CRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96KN2-1", "protein_name": "Beta-Ala-His dipeptidase", "gene_name": "CNDP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99650-1", "protein_name": "Oncostatin-M-specific receptor subunit beta", "gene_name": "OSMR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12980-1", "protein_name": "GATOR1 complex protein NPRL3", "gene_name": "NPRL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28827-1", "protein_name": "Receptor-type tyrosine-protein phosphatase mu", "gene_name": "PTPRM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BZA7-1", "protein_name": "Protocadherin-11 X-linked", "gene_name": "PCDH11X", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WUM9-1", "protein_name": "Sodium-dependent phosphate transporter 1", "gene_name": "SLC20A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08603-1", "protein_name": "Complement factor H", "gene_name": "CFH", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6EMK4-1", "protein_name": "Vasorin", "gene_name": "VASN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16112-1", "protein_name": "Aggrecan core protein", "gene_name": "ACAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00533-1", "protein_name": "Neural cell adhesion molecule L1-like protein", "gene_name": "CHL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PD5-1", "protein_name": "N-acetylmuramoyl-L-alanine amidase", "gene_name": "PGLYRP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16620-1", "protein_name": "BDNF/NT-3 growth factors receptor", "gene_name": "NTRK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P80108-1", "protein_name": "Phosphatidylinositol-glycan-specific phospholipase D", "gene_name": "GPLD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BY07-1", "protein_name": "Electrogenic sodium bicarbonate cotransporter 4", "gene_name": "SLC4A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2N2-1", "protein_name": "Rho GTPase-activating protein 28", "gene_name": "ARHGAP28", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TE54-1", "protein_name": "Anion exchange transporter", "gene_name": "SLC26A7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50120-1", "protein_name": "Retinol-binding protein 2", "gene_name": "RBP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13972-1", "protein_name": "Ras-specific guanine nucleotide-releasing factor 1", "gene_name": "RASGRF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35542-1", "protein_name": "Serum amyloid A-4 protein", "gene_name": "SAA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04278-1", "protein_name": "Sex hormone-binding globulin", "gene_name": "SHBG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43166-1", "protein_name": "Signal-induced proliferation-associated 1-like protein 1", "gene_name": "SIPA1L1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99835-1", "protein_name": "Protein smoothened", "gene_name": "SMO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05156-1", "protein_name": "Complement factor I", "gene_name": "CFI", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99784-1", "protein_name": "Noelin", "gene_name": "OLFM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17936-1", "protein_name": "Insulin-like growth factor-binding protein 3", "gene_name": "IGFBP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49747-1", "protein_name": "Cartilage oligomeric matrix protein", "gene_name": "COMP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04275-1", "protein_name": "von Willebrand factor", "gene_name": "VWF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17405-1", "protein_name": "Sphingomyelin phosphodiesterase", "gene_name": "SMPD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86TH1-1", "protein_name": "ADAMTS-like protein 2", "gene_name": "ADAMTSL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75882-1", "protein_name": "Attractin", "gene_name": "ATRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00736-1", "protein_name": "Complement C1r subcomponent", "gene_name": "C1R", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09871-1", "protein_name": "Complement C1s subcomponent", "gene_name": "C1S", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04003-1", "protein_name": "C4b-binding protein alpha chain", "gene_name": "C4BPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20851-1", "protein_name": "C4b-binding protein beta chain", "gene_name": "C4BPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07996-1", "protein_name": "Thrombospondin-1", "gene_name": "THBS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61201-1", "protein_name": "COP9 signalosome complex subunit 2", "gene_name": "COPS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48551-1", "protein_name": "Interferon alpha/beta receptor 2", "gene_name": "IFNAR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IY4-1", "protein_name": "Carboxypeptidase B2", "gene_name": "CPB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08185-1", "protein_name": "Corticosteroid-binding globulin", "gene_name": "SERPINA6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00450-1", "protein_name": "Ceruloplasmin", "gene_name": "CP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23471-1", "protein_name": "Receptor-type tyrosine-protein phosphatase zeta", "gene_name": "PTPRZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23435-1", "protein_name": "Cerebellin-1", "gene_name": "CBLN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C0L5-1", "protein_name": "Complement C4-B", "gene_name": "C4B_2; C4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWV2-1", "protein_name": "Contactin-4", "gene_name": "CNTN4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C0L4-1", "protein_name": "Complement C4-A", "gene_name": "C4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01031-1", "protein_name": "Complement C5", "gene_name": "C5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02748-1", "protein_name": "Complement component C9", "gene_name": "C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07357-1", "protein_name": "Complement component C8 alpha chain", "gene_name": "C8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16284-1", "protein_name": "Platelet endothelial cell adhesion molecule", "gene_name": "PECAM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJU2-1", "protein_name": "Lymphoid enhancer-binding factor 1", "gene_name": "LEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P03952-1", "protein_name": "Plasma kallikrein", "gene_name": "KLKB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11279-1", "protein_name": "Lysosome-associated membrane glycoprotein 1", "gene_name": "LAMP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11047-1", "protein_name": "Laminin subunit gamma-1", "gene_name": "LAMC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19823-1", "protein_name": "Inter-alpha-trypsin inhibitor heavy chain H2", "gene_name": "ITIH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05154-1", "protein_name": "Plasma serine protease inhibitor", "gene_name": "SERPINA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92628-1", "protein_name": "Uncharacterized protein KIAA0232", "gene_name": "KIAA0232", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01833-1", "protein_name": "Polymeric immunoglobulin receptor", "gene_name": "PIGR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27169-1", "protein_name": "Serum paraoxonase/arylesterase 1", "gene_name": "PON1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZMI0-1", "protein_name": "Protein phosphatase 1 regulatory subunit 21", "gene_name": "PPP1R21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05155-1", "protein_name": "Plasma protease C1 inhibitor", "gene_name": "SERPING1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22792-1", "protein_name": "Carboxypeptidase N subunit 2", "gene_name": "CPN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08575-3", "protein_name": "Receptor-type tyrosine-protein phosphatase C", "gene_name": "PTPRC", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75636-1", "protein_name": "Ficolin-3", "gene_name": "FCN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60353-1", "protein_name": "Frizzled-6", "gene_name": "FZD6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17858-1", "protein_name": "ATP-dependent 6-phosphofructokinase, liver type", "gene_name": "PFKL", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94925-1", "protein_name": "Glutaminase kidney isoform, mitochondrial", "gene_name": "GLS", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N3X6-1", "protein_name": "Ligand-dependent nuclear receptor corepressor-like protein", "gene_name": "LCORL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08380-1", "protein_name": "Galectin-3-binding protein", "gene_name": "LGALS3BP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01860-2", "protein_name": "Immunoglobulin heavy constant gamma 3", "gene_name": "IGHG3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01861-2", "protein_name": "Immunoglobulin heavy constant gamma 4", "gene_name": "IGHG4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01876-2", "protein_name": "Immunoglobulin heavy constant alpha 1", "gene_name": "IGHA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDY8-1", "protein_name": "Immunoglobulin superfamily DCC subclass member 4", "gene_name": "IGDCC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13473-1", "protein_name": "Lysosome-associated membrane glycoprotein 2", "gene_name": "LAMP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48740-1", "protein_name": "Mannan-binding lectin serine protease 1", "gene_name": "MASP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q17RP2-1", "protein_name": "Tigger transposable element-derived protein 6", "gene_name": "TIGD6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06889-1", "protein_name": "Early growth response protein 3", "gene_name": "EGR3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P03951-1", "protein_name": "Coagulation factor XI", "gene_name": "F11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19652-1", "protein_name": "Alpha-1-acid glycoprotein 2", "gene_name": "ORM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11362-1", "protein_name": "Fibroblast growth factor receptor 1", "gene_name": "FGFR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60242-1", "protein_name": "Adhesion G protein-coupled receptor B3", "gene_name": "ADGRB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02750-1", "protein_name": "Leucine-rich alpha-2-glycoprotein", "gene_name": "LRG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUX7-1", "protein_name": "Adipocyte enhancer-binding protein 1", "gene_name": "AEBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZF2-1", "protein_name": "Adhesion G protein-coupled receptor F5", "gene_name": "ADGRF5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15884-1", "protein_name": "Transcription factor 4", "gene_name": "TCF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05090-1", "protein_name": "Apolipoprotein D", "gene_name": "APOD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HDC9-1", "protein_name": "Adipocyte plasma membrane-associated protein", "gene_name": "APMAP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02749-1", "protein_name": "Beta-2-glycoprotein 1", "gene_name": "APOH", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55056-1", "protein_name": "Apolipoprotein C-IV", "gene_name": "APOC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00747-1", "protein_name": "Plasminogen", "gene_name": "PLG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q03164-1", "protein_name": "Histone-lysine N-methyltransferase 2A", "gene_name": "KMT2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00738-1", "protein_name": "Haptoglobin", "gene_name": "HP", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43734-1", "protein_name": "E3 ubiquitin ligase TRAF3IP2", "gene_name": "TRAF3IP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NTJ3-1", "protein_name": "Structural maintenance of chromosomes protein 4", "gene_name": "SMC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56856-1", "protein_name": "Claudin-18", "gene_name": "CLDN18", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10643-1", "protein_name": "Complement component C7", "gene_name": "C7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UP83-2", "protein_name": "Conserved oligomeric Golgi complex subunit 5", "gene_name": "COG5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07358-1", "protein_name": "Complement component C8 beta chain", "gene_name": "C8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q70UQ0-1", "protein_name": "Inhibitor of nuclear factor kappa-B kinase-interacting protein", "gene_name": "IKBIP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04070-1", "protein_name": "Vitamin K-dependent protein C", "gene_name": "PROC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UGM5-1", "protein_name": "Fetuin-B", "gene_name": "FETUB", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60494-1", "protein_name": "Cubilin", "gene_name": "CUBN", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14786-1", "protein_name": "Neuropilin-1", "gene_name": "NRP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02675-1", "protein_name": "Fibrinogen beta chain", "gene_name": "FGB", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75369-1", "protein_name": "Filamin-B", "gene_name": "FLNB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6UVK1-1", "protein_name": "Chondroitin sulfate proteoglycan 4", "gene_name": "CSPG4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12259-1", "protein_name": "Coagulation factor V", "gene_name": "F5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P36980-1", "protein_name": "Complement factor H-related protein 2", "gene_name": "CFHR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02985-1", "protein_name": "Complement factor H-related protein 3", "gene_name": "CFHR3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05106-1", "protein_name": "Integrin beta-3", "gene_name": "ITGB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S6-1", "protein_name": "F-box only protein 42", "gene_name": "FBXO42", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02787-1", "protein_name": "Serotransferrin", "gene_name": "TF", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UK55-1", "protein_name": "Protein Z-dependent protease inhibitor", "gene_name": "SERPINA10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43155-1", "protein_name": "Carnitine O-acetyltransferase", "gene_name": "CRAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01042-1", "protein_name": "Kininogen-1", "gene_name": "KNG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10809-1", "protein_name": "60 kDa heat shock protein, mitochondrial", "gene_name": "HSPD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZP8-1", "protein_name": "Complement C1r subcomponent-like protein", "gene_name": "C1RL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2D0-1", "protein_name": "Carbonic anhydrase 5B, mitochondrial", "gene_name": "CA5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02745-1", "protein_name": "Complement C1q subcomponent subunit A", "gene_name": "C1QA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H251-1", "protein_name": "Cadherin-23", "gene_name": "CDH23", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04004-1", "protein_name": "Vitronectin", "gene_name": "VTN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4L1-1", "protein_name": "Hypoxia up-regulated protein 1", "gene_name": "HYOU1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4FZB7-1", "protein_name": "Histone-lysine N-methyltransferase KMT5B", "gene_name": "KMT5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BWG4-1", "protein_name": "Single-stranded DNA-binding protein 4", "gene_name": "SSBP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDG4-1", "protein_name": "Helicase POLQ-like", "gene_name": "HELQ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41271-1", "protein_name": "Neuroblastoma suppressor of tumorigenicity 1", "gene_name": "NBL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14108-1", "protein_name": "Lysosome membrane protein 2", "gene_name": "SCARB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q75T13-1", "protein_name": "GPI inositol-deacylase", "gene_name": "PGAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05164-1", "protein_name": "Myeloperoxidase", "gene_name": "MPO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55058-1", "protein_name": "Phospholipid transfer protein", "gene_name": "PLTP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07225-1", "protein_name": "Vitamin K-dependent protein S", "gene_name": "PROS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKA9-1", "protein_name": "Polypyrimidine tract-binding protein 2", "gene_name": "PTBP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17812-1", "protein_name": "CTP synthase 1", "gene_name": "CTPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q04756-1", "protein_name": "Hepatocyte growth factor activator serine protease", "gene_name": "HGFAC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02790-1", "protein_name": "Hemopexin", "gene_name": "HPX", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04196-1", "protein_name": "Histidine-rich glycoprotein", "gene_name": "HRG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05546-1", "protein_name": "Heparin cofactor 2", "gene_name": "SERPIND1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01877-2", "protein_name": "Immunoglobulin heavy constant alpha 2", "gene_name": "IGHA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10586-1", "protein_name": "Receptor-type tyrosine-protein phosphatase F", "gene_name": "PTPRF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19827-1", "protein_name": "Inter-alpha-trypsin inhibitor heavy chain H1", "gene_name": "ITIH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01591-1", "protein_name": "Immunoglobulin J chain", "gene_name": "JCHAIN", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00391-1", "protein_name": "Sulfhydryl oxidase 1", "gene_name": "QSOX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14624-1", "protein_name": "Inter-alpha-trypsin inhibitor heavy chain H4", "gene_name": "ITIH4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01859-2", "protein_name": "Immunoglobulin heavy constant gamma 2", "gene_name": "IGHG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZP01-1", "protein_name": "RNA-binding protein 44", "gene_name": "RBM44", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z6K1-1", "protein_name": "THAP domain-containing protein 5", "gene_name": "THAP5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKZ4-1", "protein_name": "Teneurin-1", "gene_name": "TENM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54855-1", "protein_name": "UDP-glucuronosyltransferase 2B15", "gene_name": "UGT2B15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13591-2", "protein_name": "Neural cell adhesion molecule 1", "gene_name": "NCAM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25311-1", "protein_name": "Zinc-alpha-2-glycoprotein", "gene_name": "AZGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95498-1", "protein_name": "Pantetheine hydrolase VNN2", "gene_name": "VNN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02774-1", "protein_name": "Vitamin D-binding protein", "gene_name": "GC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08581-1", "protein_name": "Hepatocyte growth factor receptor", "gene_name": "MET", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q10588-1", "protein_name": "ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 2", "gene_name": "BST1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z7M0-1", "protein_name": "Multiple epidermal growth factor-like domains protein 8", "gene_name": "MEGF8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13873-1", "protein_name": "Bone morphogenetic protein receptor type-2", "gene_name": "BMPR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKY1-1", "protein_name": "Zinc fingers and homeoboxes protein 1", "gene_name": "ZHX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13740-1", "protein_name": "CD166 antigen", "gene_name": "ALCAM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NTU7-1", "protein_name": "Cerebellin-4", "gene_name": "CBLN4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01024-1", "protein_name": "Complement C3", 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"gene_name": "PLXNB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWZ8-1", "protein_name": "Oncoprotein-induced transcript 3 protein", "gene_name": "OIT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12866-1", "protein_name": "Tyrosine-protein kinase Mer", "gene_name": "MERTK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y210-1", "protein_name": "Short transient receptor potential channel 6", "gene_name": "TRPC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05543-1", "protein_name": "Thyroxine-binding globulin", "gene_name": "SERPINA7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01857-2", "protein_name": "Immunoglobulin heavy constant gamma 1", "gene_name": "IGHG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15262-1", "protein_name": "Receptor-type tyrosine-protein phosphatase kappa", "gene_name": "PTPRK", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23142-1", "protein_name": "Fibulin-1", "gene_name": "FBLN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54753-1", "protein_name": "Ephrin type-B receptor 3", "gene_name": "EPHB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94892-1", "protein_name": "Zinc finger protein 432", "gene_name": "ZNF432", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04156-1", "protein_name": "Major prion protein", "gene_name": "PRNP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01023-1", "protein_name": "Alpha-2-macroglobulin", "gene_name": "A2M", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04217-1", "protein_name": "Alpha-1B-glycoprotein", "gene_name": "A1BG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10721-1", "protein_name": "Mast/stem cell growth factor receptor Kit", "gene_name": "KIT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01011-1", "protein_name": "Alpha-1-antichymotrypsin", "gene_name": "SERPINA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38398-1", "protein_name": "Breast cancer type 1 susceptibility protein", 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"glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 1 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_n_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl", "filter_code", "uniprot_canonical_ac", "icn3d_view.label", "icn3d_view.url", "mining_tool" ] } ] }, { "title": "A human brain glycoprotein related to the mouse cell adhesion molecule L1.", "journal": "J. Biol. Chem.", "date": "1988", "authors": "Wolff J M, Frank R, Mujoo K, Spiro R C, Reisfeld R A, Rathjen F G", "reference": { "type": "PubMed", "id": "3136168", "url": "https://pubmed.ncbi.nlm.nih.gov/3136168" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32004-1", "protein_name": "Neural cell adhesion molecule L1", "gene_name": "L1CAM", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P32004", "url": "https://www.uniprot.org/uniprotkb/P32004" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.3136168", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { 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MASA is characterized by mild to moderate intellectual deficit, delayed development of speech, hypotonia progressing to spasticity or spastic paraplegia, adducted thumbs, and mild to moderate distension of the cerebral ventricles." }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", "name": "Gareis-Mason syndrome", "description": "" }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", "name": "MASA syndrome", "description": "" }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", "name": "intellectual disability-aphasia-shuffling gait-adducted thumbs syndrome", "description": "" }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", "name": "masa syndrome, X-linked recessive", "description": "" }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", "name": "spastic paraplegia, X-linked", "description": "" }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", "name": "Clasped thumb and mental retardation", "description": "" }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", "name": "adducted thumb with mental retardation", "description": "" }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", "name": "intellectual disability aphasia shuffling Gait adducted thumbs (MASA)", "description": "" }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", "name": "mental retardation aphasia shuffling Gait adducted thumbs (MASA)", "description": "" }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", "name": "mental retardation, aphasia, shuffling Gait, and adducted thumbs", "description": "" }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", "name": "spastic paraplegia 1", "description": "" }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", "name": "thumb congenital clasped with intellectual disability", "description": "" }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", "name": "thumb congenital clasped with mental retardation", "description": "" }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", "name": "thumb, congenital Clasped, with mental retardation", "description": "" }, { "id": "MIM:303350", "resource": "MIM", "url": "https://www.omim.org/entry/303350", "name": "MASA syndrome", "description": "MASA syndrome" } ], "unlinked_id_list": [], "evidence": [ { "id": "0060246", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:0060246" } ] }, { "disease_id": "DOID:2476", "recommended_name": { "id": "DOID:2476", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:2476", "name": "hereditary spastic paraplegia", "description": "A paraplegia that is characterized by progressive stiffness and contraction (spasticity) in the lower limbs." }, "synonyms": [ { "id": "DOID:2476", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:2476", "name": "French settlement disease", "description": "" }, { "id": "DOID:2476", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:2476", "name": "Strumpell-Lorrain disease", "description": "" }, { "id": "DOID:2476", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:2476", "name": "familial spastic paraplegia", "description": "" }, { "id": "DOID:2476", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:2476", "name": "hereditary spastic paraparesis", "description": "" }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", "name": "MASA syndrome", "description": "MASA syndrome (Mental retardation, Aphasia, Spastic paraplegia, Adducted thumbs) is a historical term used to describe a phenotype now considered to be part of the X-linked L1 clinical spectrum (L1 syndrome). MASA is characterized by mild to moderate intellectual deficit, delayed development of speech, hypotonia progressing to spasticity or spastic paraplegia, adducted thumbs, and mild to moderate distension of the cerebral ventricles." }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", "name": "Gareis-Mason syndrome", "description": "" }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", "name": "MASA syndrome", "description": "" }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", "name": "intellectual disability-aphasia-shuffling gait-adducted thumbs syndrome", "description": "" }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", "name": "masa syndrome, X-linked recessive", "description": "" }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", "name": "spastic paraplegia, X-linked", "description": "" }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", "name": "Clasped thumb and mental retardation", "description": "" }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", "name": "adducted thumb with mental retardation", "description": "" }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", "name": "intellectual disability aphasia shuffling Gait adducted thumbs (MASA)", "description": "" }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", "name": "mental retardation aphasia shuffling Gait adducted thumbs (MASA)", "description": "" }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", 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Additional features include stenosis of the aqueduct of Sylvius, adducted thumbs, spastic paraparesis and impaired intellectual development." }, "synonyms": [ { "id": "DOID:0070686", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0070686", "name": "X-linked hydrocephalus", "description": "" }, { "id": "MONDO:0010611", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010611", "name": "X-linked hydrocephalus with stenosis of the aqueduct of Sylvius", "description": "A form of L1 syndrome caused by changes in the L1CAM gene characterized by severe hydrocephalus mostly with prenatal onset, signs of intracranial hypertension, adducted thumbs, spasticity, and severe intellectual deficit. HSAS represents the severe end of the spectrum and is associated with poor prognosis." }, { "id": "MONDO:0010611", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010611", "name": "Bickers-Adams syndrome", "description": "" }, { "id": "MONDO:0010611", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010611", "name": "HSAS", "description": "" }, { "id": "MONDO:0010611", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010611", "name": "X-linked HSAS", "description": "" }, { "id": "MONDO:0010611", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010611", "name": "X-linked acqueductal stenosis", "description": "" }, { "id": "MONDO:0010611", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010611", "name": "X-linked hydrocephalus", "description": "" }, { "id": "MONDO:0010611", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010611", "name": 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Additional features include stenosis of the aqueduct of Sylvius, adducted thumbs, spastic paraparesis and impaired intellectual development." }, "synonyms": [ { "id": "DOID:0070686", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0070686", "name": "X-linked hydrocephalus", "description": "" }, { "id": "MONDO:0010611", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010611", "name": "X-linked hydrocephalus with stenosis of the aqueduct of Sylvius", "description": "A form of L1 syndrome caused by changes in the L1CAM gene characterized by severe hydrocephalus mostly with prenatal onset, signs of intracranial hypertension, adducted thumbs, spasticity, and severe intellectual deficit. HSAS represents the severe end of the spectrum and is associated with poor prognosis." }, { "id": "MONDO:0010611", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010611", "name": "Bickers-Adams syndrome", "description": "" }, { "id": "MONDO:0010611", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010611", "name": "HSAS", "description": "" }, { "id": "MONDO:0010611", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010611", "name": "X-linked HSAS", "description": "" }, { "id": "MONDO:0010611", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010611", "name": "X-linked acqueductal stenosis", "description": "" }, { "id": "MONDO:0010611", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010611", "name": "X-linked hydrocephalus", "description": "" }, { "id": "MONDO:0010611", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010611", "name": 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"https://monarchinitiative.org/disease/MONDO:0010611", "name": "hydrocephalus with stenosis of the aqueduct of Sylvius", "description": "" }, { "id": "MONDO:0010611", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010611", "name": "HSAS1", "description": "" }, { "id": "MONDO:0010611", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010611", "name": "HYCX", "description": "" }, { "id": "MONDO:0010611", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010611", "name": "XLAS", "description": "" }, { "id": "MONDO:0010611", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010611", "name": "hydrocephalus due to congenital stenosis of aqueduct of Sylvius", "description": "" }, { "id": "MIM:307000", "resource": "MIM", "url": "https://www.omim.org/entry/307000", "name": "Hydrocephalus, congenital, X-linked", "description": "Hydrocephalus, congenital, X-linked" } ], "unlinked_id_list": [], "evidence": [ { "id": "307000", "database": "MIM", "url": "https://www.omim.org/entry/307000" } ] }, { "disease_id": "DOID:0060246", "recommended_name": { "id": "DOID:0060246", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0060246", "name": "MASA syndrome", "description": "A hereditary spastic paraplegia that is characterized by hydrocephalus, spasticity of the lower limbs, adducted thumbs, aphasia, seizures, agenesis of the corpus callosum and intellectual disability in the mild to moderate range." }, "synonyms": [ { "id": "DOID:0060246", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0060246", "name": "CRASH syndrome", "description": "" }, { "id": "DOID:0060246", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0060246", "name": "Gareis-Mason syndrome", "description": "" }, { "id": "DOID:0060246", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0060246", "name": "L1 syndrome", "description": "" }, { "id": "DOID:0060246", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0060246", "name": "SPG1", "description": "" }, { "id": "DOID:0060246", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0060246", "name": "X-linked corpus callosum agenesis", "description": "" }, { "id": "DOID:0060246", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0060246", "name": "X-linked spastic paraplegia 1", "description": "" }, { "id": "DOID:0060246", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0060246", "name": "hereditary spastic paraplegia 1", "description": "" }, { "id": "DOID:0060246", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0060246", "name": "X-linked complicated hereditary spastic paraplegia type 1", "description": "" }, { "id": "MONDO:0010559", "resource": "MONDO", "url": 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MASA is characterized by mild to moderate intellectual deficit, delayed development of speech, hypotonia progressing to spasticity or spastic paraplegia, adducted thumbs, and mild to moderate distension of the cerebral ventricles." }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", "name": "Gareis-Mason syndrome", "description": "" }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", "name": "MASA syndrome", "description": "" }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", "name": "intellectual disability-aphasia-shuffling gait-adducted thumbs syndrome", "description": "" }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", "name": "masa syndrome, X-linked recessive", "description": "" }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", "name": "spastic paraplegia, X-linked", "description": "" }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", "name": "Clasped thumb and mental retardation", "description": "" }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", "name": "adducted thumb with mental retardation", "description": "" }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", "name": "intellectual disability aphasia shuffling Gait adducted thumbs (MASA)", "description": "" }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", "name": "mental retardation aphasia shuffling Gait adducted thumbs (MASA)", "description": "" }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", "name": "mental retardation, aphasia, shuffling Gait, and adducted thumbs", "description": "" }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", "name": "spastic paraplegia 1", "description": "" }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", "name": "thumb congenital clasped with intellectual disability", "description": "" }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", "name": "thumb congenital clasped with mental retardation", "description": "" }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", "name": "thumb, congenital Clasped, with mental retardation", "description": "" }, { "id": "MIM:303350", "resource": "MIM", "url": "https://www.omim.org/entry/303350", "name": "MASA syndrome", "description": "MASA syndrome" } ], "unlinked_id_list": [], "evidence": [ { "id": "0060246", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:0060246" } ] }, { "disease_id": "DOID:2476", "recommended_name": { "id": "DOID:2476", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:2476", "name": "hereditary spastic paraplegia", "description": "A paraplegia that is characterized by progressive stiffness and contraction (spasticity) in the lower limbs." }, "synonyms": [ { "id": "DOID:2476", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:2476", "name": "French settlement disease", "description": "" }, { "id": "DOID:2476", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:2476", "name": "Strumpell-Lorrain disease", "description": "" }, { "id": "DOID:2476", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:2476", "name": "familial spastic paraplegia", "description": "" }, { "id": "DOID:2476", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:2476", "name": "hereditary spastic paraparesis", "description": "" }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", "name": "MASA syndrome", "description": "MASA syndrome (Mental retardation, Aphasia, Spastic paraplegia, Adducted thumbs) is a historical term used to describe a phenotype now considered to be part of the X-linked L1 clinical spectrum (L1 syndrome). MASA is characterized by mild to moderate intellectual deficit, delayed development of speech, hypotonia progressing to spasticity or spastic paraplegia, adducted thumbs, and mild to moderate distension of the cerebral ventricles." }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", "name": "Gareis-Mason syndrome", "description": "" }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", "name": "MASA syndrome", "description": "" }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", "name": "intellectual disability-aphasia-shuffling gait-adducted thumbs syndrome", "description": "" }, { "id": "MONDO:0010559", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010559", "name": "masa syndrome, X-linked recessive", "description": "" }, { "id": "MONDO:0010559", "resource": "MONDO", "url": 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[9606]" } ], "record_id": "pubmed.9360995", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 25 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } 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"total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A single immunoglobulin-like domain of the human neural cell adhesion molecule L1 supports adhesion by multiple vascular and platelet integrins.", "journal": "The Journal of cell biology", "date": "1997", "authors": "Felding-Habermann B, Silletti S, Mei F, Siu CH, Yip PM, Brooks PC, Cheresh DA, O'Toole TE, Ginsberg MH, Montgomery AM", "reference": { "type": "PubMed", "id": "9396761", "url": "https://pubmed.ncbi.nlm.nih.gov/9396761" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32004-1", "protein_name": "Neural cell adhesion molecule L1", "gene_name": "L1CAM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28482-1", "protein_name": "Mitogen-activated protein kinase 1", "gene_name": "MAPK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13153-1", "protein_name": "Serine/threonine-protein kinase PAK 1", "gene_name": "PAK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P36507-1", "protein_name": "Dual specificity mitogen-activated protein kinase kinase 2", "gene_name": "MAP2K2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19784-1", "protein_name": "Casein kinase II subunit alpha'", "gene_name": "CSNK2A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08514-1", "protein_name": "Integrin alpha-IIb", "gene_name": "ITGA2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06756-1", "protein_name": "Integrin alpha-V", "gene_name": "ITGAV", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08648-1", "protein_name": "Integrin alpha-5", "gene_name": "ITGA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52735-1", "protein_name": "Guanine nucleotide exchange factor VAV2", "gene_name": "VAV2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63000-1", "protein_name": "Ras-related C3 botulinum toxin substrate 1", "gene_name": "RAC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05556-1", "protein_name": "Integrin beta-1", "gene_name": "ITGB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14786-1", "protein_name": "Neuropilin-1", "gene_name": "NRP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05106-1", "protein_name": "Integrin beta-3", "gene_name": "ITGB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02750-1", "protein_name": "Dual specificity mitogen-activated protein kinase kinase 1", "gene_name": "MAP2K1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13797-1", "protein_name": "Integrin alpha-9", "gene_name": "ITGA9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13591-2", "protein_name": "Neural cell adhesion molecule 1", "gene_name": "NCAM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68400-1", "protein_name": "Casein kinase II subunit alpha", "gene_name": "CSNK2A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P67870-1", "protein_name": "Casein kinase II subunit beta", "gene_name": "CSNK2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27361-1", "protein_name": "Mitogen-activated protein kinase 3", "gene_name": "MAPK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00533-1", "protein_name": "Epidermal growth factor receptor", "gene_name": "EGFR", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P32004", "url": "https://www.uniprot.org/uniprotkb/P32004" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9396761", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 20 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Evidence for somatic and germline mosaicism in CRASH syndrome.", "journal": "Human mutation", "date": "1998", "authors": "Vits L, Chitayat D, Van Camp G, Holden JJ, Fransen E, Willems PJ", "reference": { "type": "PubMed", "id": "9452110", "url": "https://pubmed.ncbi.nlm.nih.gov/9452110" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32004-1", "protein_name": "Neural cell adhesion molecule L1", "gene_name": "L1CAM", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P32004", "url": "https://www.uniprot.org/uniprotkb/P32004" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9452110", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { 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