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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "ATP-binding cassette transporter G26 is required for male fertility and pollen exine formation in Arabidopsis.", "journal": "Plant physiology", "date": "2010-10", "authors": "Quilichini Teagen D, Friedmann Michael C, Samuels A Lacey, Douglas Carl J", "reference": { "type": "PubMed", "id": "20732973", "url": "https://pubmed.ncbi.nlm.nih.gov/20732973" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LK50-1", "protein_name": "ABC transporter G family member 26", "gene_name": 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "WBC27, an adenosine tri-phosphate-binding cassette protein, controls pollen wall formation and patterning in Arabidopsis.", "journal": "Journal of integrative plant biology", "date": "2011-01", "authors": "Dou Xiao-Ying, Yang Ke-Zhen, Zhang Yi, Wang Wei, Liu Xiao-Lei, Chen Li-Qun, Zhang Xue-Qin, Ye De", "reference": { "type": "PubMed", "id": "21205178", "url": "https://pubmed.ncbi.nlm.nih.gov/21205178" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LK50-1", "protein_name": "ABC transporter G family member 26", "gene_name": "ABCG26", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LK50", "url": "https://www.uniprot.org/uniprotkb/Q9LK50" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", 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for cell and molecular biology", "date": "2011-01", "authors": "Choi Hyunju, Jin Jun-Young, Choi Setbyoul, Hwang Jae-Ung, Kim Yu-Young, Suh Mi Chung, Lee Youngsook", "reference": { "type": "PubMed", "id": "21223384", "url": "https://pubmed.ncbi.nlm.nih.gov/21223384" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LK50-1", "protein_name": "ABC transporter G family member 26", "gene_name": "ABCG26", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LK50", "url": "https://www.uniprot.org/uniprotkb/Q9LK50" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.21223384", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "The PARVUS gene is expressed in cells undergoing secondary wall thickening and is essential for glucuronoxylan biosynthesis.", "journal": "Plant & cell physiology", "date": "2007-12", "authors": "Lee Chanhui, Zhong Ruiqin, Richardson Elizabeth A, Himmelsbach David S, McPhail Brooks T, Ye Zheng-Hua", "reference": { "type": "PubMed", "id": "17991630", "url": "https://pubmed.ncbi.nlm.nih.gov/17991630" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LN68-1", "protein_name": "Probable galacturonosyltransferase-like 1", "gene_name": "GATL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZUV3-1", "protein_name": "Probable glucuronoxylan glucuronosyltransferase IRX7", "gene_name": "IRX7", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LN68", "url": "https://www.uniprot.org/uniprotkb/Q9LN68" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.17991630", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { 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"sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "VAJ/GFA1/CLO is involved in the directional control of floral organ growth.", "journal": "Plant & cell physiology", "date": "2009-03", "authors": "Yagi Noriyoshi, Takeda Seiji, Matsumoto Noritaka, Okada Kiyotaka", "reference": { "type": "PubMed", "id": "19168457", "url": "https://pubmed.ncbi.nlm.nih.gov/19168457" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LNC5-1", "protein_name": "110 kDa U5 small nuclear ribonucleoprotein component CLO", "gene_name": "CLO", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LNC5", "url": "https://www.uniprot.org/uniprotkb/Q9LNC5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.19168457", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Isolation of Arabidopsis thaliana cDNAs that confer yeast boric acid tolerance.", "journal": "Bioscience, biotechnology, and biochemistry", "date": "2006-07", "authors": "Nozawa Akira, Miwa Kyoko, Kobayashi Masaharu, Fujiwara Toru", "reference": { "type": "PubMed", "id": "16861809", "url": "https://pubmed.ncbi.nlm.nih.gov/16861809" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LNC9-1", "protein_name": "Transcription factor MYB13", "gene_name": "MYB13", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LNC9", "url": "https://www.uniprot.org/uniprotkb/Q9LNC9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16861809", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Systemic and intracellular responses to photooxidative stress in Arabidopsis.", "journal": "Plant Cell", "date": "2007", "authors": "Rossel Jan Bart, Wilson Pip B, Hussain Dawar, Woo Nick S, Gordon Matthew J, Mewett Osman P, Howell Katharine A, Whelan Jim, Kazan Kemal, Pogson Barry J", "reference": { "type": "PubMed", "id": "18156220", "url": "https://pubmed.ncbi.nlm.nih.gov/18156220" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LNR3-1", "protein_name": "Lipoxygenase 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"authors": "Roeder Adrienne H K, Chickarmane Vijay, Cunha Alexandre, Obara Boguslaw, Manjunath B S, Meyerowitz Elliot M", "reference": { "type": "PubMed", "id": "20485493", "url": "https://pubmed.ncbi.nlm.nih.gov/20485493" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LPP4-1", "protein_name": "Cyclin-dependent protein kinase inhibitor SMR1", "gene_name": "SMR1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LPP4", "url": "https://www.uniprot.org/uniprotkb/Q9LPP4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "mutagenesis": [ { "start_pos": 62, "end_pos": 62, "sequence_org": "P", "sequence_mut": "S", "comment": "In lgo-1; loss of giant cells in sepals.", "evidence": [ { "database": "UniProtKB", "id": "Q9LPP4", "url": "https://www.uniprot.org/uniprotkb/Q9LPP4" }, { 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"url": "https://www.uniprot.org/uniprotkb/Q9LPP4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.21613568", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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for the CKI-RB-E2F cell-cycle signaling pathway in plant effector-triggered immunity.", "journal": "Cell host & microbe", "date": "2014-12-10", "authors": "Wang Shui, Gu Yangnan, Zebell Sophia G, Anderson Lisa K, Wang Wei, Mohan Rajinikanth, Dong Xinnian", "reference": { "type": "PubMed", "id": "25455564", "url": "https://pubmed.ncbi.nlm.nih.gov/25455564" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LPP4-1", "protein_name": "Cyclin-dependent protein kinase inhibitor SMR1", "gene_name": "SMR1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LV85-1", "protein_name": "Protein CPR-5", "gene_name": "CPR5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LZ78-1", "protein_name": "Cyclin-dependent protein kinase inhibitor SIM", "gene_name": "SIM", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LPP4", "url": 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for nucleotide-rhamnose synthesis in Arabidopsis.", "journal": "Plant physiology", "date": "2004-04", "authors": "Watt Gregory, Leoff Christine, Harper April D, Bar-Peled Maor", "reference": { "type": "PubMed", "id": "15020741", "url": "https://pubmed.ncbi.nlm.nih.gov/15020741" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LQ04-1", "protein_name": "Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase", "gene_name": "ER", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LQ04", "url": "https://www.uniprot.org/uniprotkb/Q9LQ04" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15020741", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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Biol.", "date": "1999", "authors": "Devitt M L, Maas K J, Stafstrom J P", "reference": { "type": "PubMed", "id": "10080710", "url": "https://pubmed.ncbi.nlm.nih.gov/10080710" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LQK0-1", "protein_name": "Developmentally-regulated G protein 1", "gene_name": "DRG1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LQK0", "url": "https://www.uniprot.org/uniprotkb/Q9LQK0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.10080710", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Characterization of ATDRG1, a member of a new class of GTP-binding proteins in plants.", "journal": "Plant Mol. Biol.", "date": "1999", "authors": "Etheridge N, Trusov Y, Verbelen J P, Botella J R", "reference": { "type": "PubMed", "id": "10380799", "url": "https://pubmed.ncbi.nlm.nih.gov/10380799" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LQK0-1", "protein_name": "Developmentally-regulated G protein 1", "gene_name": "DRG1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LQK0", "url": "https://www.uniprot.org/uniprotkb/Q9LQK0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.10380799", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", 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}, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { 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[] } ] }, { "title": "AtMKK6 and AtMPK13 are required for lateral root formation in Arabidopsis.", "journal": "Plant signaling & behavior", "date": "2011-10", "authors": "Zeng Qingning, Sritubtim Somrudee, Ellis Brian E", "reference": { "type": "PubMed", "id": "21904115", "url": "https://pubmed.ncbi.nlm.nih.gov/21904115" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LQQ9-1", "protein_name": "Mitogen-activated protein kinase 13", "gene_name": "MPK13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FJV0-1", "protein_name": "Mitogen-activated protein kinase kinase 6", "gene_name": "MKK6", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LQQ9", "url": "https://www.uniprot.org/uniprotkb/Q9LQQ9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": 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"authors": "Kim Jong Hum, Cho Seok Keun, Oh Tae Rin, Ryu Moon Young, Yang Seong Wook, Kim Woo Taek", "reference": { "type": "PubMed", "id": "29087340", "url": "https://pubmed.ncbi.nlm.nih.gov/29087340" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LQX2-1", "protein_name": "E3 ubiquitin-protein ligase MPSR1", "gene_name": "MPSR1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LQX2", "url": "https://www.uniprot.org/uniprotkb/Q9LQX2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.29087340", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", 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"Primary root protophloem differentiation requires balanced phosphatidylinositol-4,5-biphosphate levels and systemically affects root branching.", "journal": "Development (Cambridge, England)", "date": "2015-04-15", "authors": "Rodriguez-Villalon Antia, Gujas Bojan, van Wijk Ringo, Munnik Teun, Hardtke Christian S", "reference": { "type": "PubMed", "id": "25813544", "url": "https://pubmed.ncbi.nlm.nih.gov/25813544" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LR47-1", "protein_name": "Type IV inositol polyphosphate 5-phosphatase 6", "gene_name": "IP5P6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WQ41-1", "protein_name": "Type IV inositol polyphosphate 5-phosphatase 7", "gene_name": "IP5P7", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LR47", "url": "https://www.uniprot.org/uniprotkb/Q9LR47" } ], "common_name": "Mouse-ear cress", 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: for cell and molecular biology", "date": "2001-07", "authors": "Ishikawa A, Okamoto H, Iwasaki Y, Asahi T", "reference": { "type": "PubMed", "id": "11489187", "url": "https://pubmed.ncbi.nlm.nih.gov/11489187" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LR75-1", "protein_name": "Coproporphyrinogen-III oxidase 1, chloroplastic", "gene_name": "CPX1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LR75", "url": "https://www.uniprot.org/uniprotkb/Q9LR75" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11489187", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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"count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { 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Analysis of sto1/nced3, an abscisic acid-deficient but salt stress-tolerant mutant in Arabidopsis.", "journal": "Plant physiology", "date": "2004-10", "authors": "Ruggiero Bruno, Koiwa Hisashi, Manabe Yuzuki, Quist Tanya M, Inan Gunsu, Saccardo Franco, Joly Robert J, Hasegawa Paul M, Bressan Ray A, Maggio Albino", "reference": { "type": "PubMed", "id": "15466233", "url": "https://pubmed.ncbi.nlm.nih.gov/15466233" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LRR7-1", "protein_name": "9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic", "gene_name": "NCED3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LRR7", "url": "https://www.uniprot.org/uniprotkb/Q9LRR7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15466233", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A 9-cis-epoxycarotenoid dioxygenase inhibitor for use in the elucidation of abscisic acid action mechanisms.", "journal": "Bioorg. Med. Chem.", "date": "2006", "authors": "Kitahata Nobutaka, Han Sun-Young, Noji Natsumi, Saito Tamio, Kobayashi Masatomo, Nakano Takeshi, Kuchitsu Kazuyuki, Shinozaki Kazuo, Yoshida Shigeo, Matsumoto Shogo, Tsujimoto Masafumi, Asami Tadao", "reference": { "type": "PubMed", "id": "16682205", "url": "https://pubmed.ncbi.nlm.nih.gov/16682205" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LRR7-1", "protein_name": "9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic", "gene_name": "NCED3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LRR7", "url": "https://www.uniprot.org/uniprotkb/Q9LRR7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16682205", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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