[ { "title": "A novel mutation (A148V) in the glucose 6-phosphate translocase (SLC37A4) gene in a Korean patient with glycogen storage disease type 1b.", "journal": "Journal of Korean medical science", "date": "2005", "authors": "Han SH, Ki CS, Lee JE, Hong YJ, Son BK, Lee KH, Choe YH, Lee SY, Kim JW", "reference": { "type": "PubMed", "id": "15953877", "url": "https://pubmed.ncbi.nlm.nih.gov/15953877" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O43826-1", "protein_name": "Glucose-6-phosphate exchanger SLC37A4", "gene_name": "SLC37A4", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O43826", "url": "https://www.uniprot.org/uniprotkb/O43826" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15953877", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Glycogen storage disease type Ib: the first case in Taiwan.", "journal": "Pediatrics and neonatology", "date": "2009", "authors": "Hsiao HJ, Chang HH, Hwu WL, Lam CW, Lee NC, Chien YH", "reference": { "type": "PubMed", "id": "19579760", "url": "https://pubmed.ncbi.nlm.nih.gov/19579760" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O43826-1", "protein_name": "Glucose-6-phosphate exchanger SLC37A4", "gene_name": "SLC37A4", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O43826", "url": "https://www.uniprot.org/uniprotkb/O43826" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.19579760", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A novel mutation in SLC37A4 gene in a Sri Lankan boy with glycogen storage disease type Ib associated with very early onset neutropenia.", "journal": "Journal of molecular and genetic medicine : an international journal of biomedical research", "date": "2011", "authors": "Dissanayake VH, Jayasinghe JD, Thilakaratne V, Jayasekara RW", "reference": { "type": "PubMed", "id": "21629566", "url": "https://pubmed.ncbi.nlm.nih.gov/21629566" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O43826-1", "protein_name": "Glucose-6-phosphate exchanger SLC37A4", "gene_name": "SLC37A4", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O43826", "url": "https://www.uniprot.org/uniprotkb/O43826" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.21629566", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "SLC37A4-CDG: Mislocalization of the glucose-6-phosphate transporter to the Golgi causes a new congenital disorder of glycosylation.", "journal": "Molecular genetics and metabolism reports", "date": "2020", "authors": "Marquardt T, Bzduch V, Hogrebe M, Rust S, Reunert J, Gruneberg M, Park J, Callewaert N, Lachmann R, Wada Y, Engel T", "reference": { "type": "PubMed", "id": "32884905", "url": "https://pubmed.ncbi.nlm.nih.gov/32884905" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O43826-1", "protein_name": "Glucose-6-phosphate exchanger SLC37A4", "gene_name": "SLC37A4", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O43826", "url": "https://www.uniprot.org/uniprotkb/O43826" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "snv": [ { "evidence": [ { "id": "O43826", "database": "BioMuta", "url": "https://hivelab.biochemistry.gwu.edu/biomuta/proteinview/O43826" }, { "id": "rs2134626266", "database": "dbSNP", "url": "https://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?type=rs&rs=rs2134626266" }, { "id": "rs2134626266", "database": "ENSEMBL", "url": "https://www.ensembl.org/id/rs2134626266" }, { "id": "32884905", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/32884905" }, { "id": "33728255", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/33728255" }, { "id": "33964207", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/33964207" } ], "glycoeffect": [], "start_pos": 423, "end_pos": 423, "subjects_tested": "1704", "subjects_positive": "1", "frequency": "0.1", "sequence_org": "R", "sequence_mut": "*", "comment": "Somatic mutation passed 1 filters: protein-of-interest(glycogene, carbohydrate synthesis and metabolism/transporter).", "chr_id": "11", "chr_pos": "119024933", "ref_nt": "G", "alt_nt": "A", "minor_allelic_frequency": "", "site_lbl": "R423", "disease": [ { "disease_id": "DOID:363", "recommended_name": { "id": "DOID:363", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:363", "name": "uterine cancer", "description": "A female reproductive organ cancer that is located_in the uterus." }, "synonyms": [ { "id": "DOID:363", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:363", "name": "CA - cancer of uterus", "description": "" }, { "id": "DOID:363", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:363", "name": "Tumour of uterus", "description": "" }, { "id": "DOID:363", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:363", "name": "malignant neoplasm of uterus", "description": "" }, { "id": "DOID:363", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:363", "name": "malignant uterine tumor", "description": "" }, { "id": "DOID:363", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:363", "name": "neoplasm of uterus", "description": "" }, { "id": "DOID:363", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:363", "name": "uterine tumor", "description": "" }, { "id": "DOID:363", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:363", "name": "uterus neoplasm", "description": "" } ], "unlinked_id_list": [ "DOID:9460", "DOID:5166", "DOID:2021", "DOID:4114" ], "evidence": [ { "id": "363", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:363" } ] }, { "disease_id": "DOID:0051051", "recommended_name": { "id": "DOID:0051051", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0051051", "name": "congenital disorder of glycosylation type IIw", "description": "A congenital disorder of glycosylation type II that is characterized by liver dysfunction, coagulation deficiencies, and profound abnormalities in N-glycosylation of serum specific proteins and that has_material_basis_in heterozygous mutation in the G6PT1 gene (SLC37A4), which encodes glucose-6-phosphate translocase, on chromosome 11q23." }, "synonyms": [ { "id": "MONDO:0030437", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0030437", "name": "congenital disorder of glycosylation, type IIw", "description": "" }, { "id": "MONDO:0030437", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0030437", "name": "CDG2W", "description": "" }, { "id": "MIM:619525", "resource": "MIM", "url": "https://www.omim.org/entry/619525", "name": "Congenital disorder of glycosylation 2W", "description": "Congenital disorder of glycosylation 2W" } ], "unlinked_id_list": [], "evidence": [ { "id": "619525", "database": "MIM", "url": "https://www.omim.org/entry/619525" }, { "id": "SLC37A4", "database": "Genomics England", "url": "https://panelapp.genomicsengland.co.uk/panels/25/gene/SLC37A4/#!details" }, { "id": "0051051", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:0051051" } ] }, { "disease_id": "DOID:0081330", "recommended_name": { "id": "DOID:0081330", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0081330", "name": "glycogen storage disease Ib", "description": "A glycogen storage disease I that has_material_basis_in homozygous or compound heterozygous mutation in the G6PT1 gene (SLC37A4), which encodes glucose-6-phosphate translocase, on chromosome 11q23." }, "synonyms": [ { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease Ib", "description": "A type of glycogenosis due to G6P deficiency." }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "G6P deficiency type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "G6P translocase deficiency", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "G6PT deficiency", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD Ib", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD due to G6P deficiency type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD due to G6PT deficiency", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD type 1 non a", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD type 1b", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD1B", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSDIb", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glucose-6-phosphate transport defect", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease Ib", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease Ic", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease due to G6P deficiency type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease type 1b", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease type I non-a", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease type Ic", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogenosis due to glucose-6-phosphatase deficiency type 1B", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogenosis due to glucose-6-phosphatase transport defect type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogenosis type 1b", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogenosis type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD1C", "description": "" }, { "id": "MIM:232220", "resource": "MIM", "url": "https://www.omim.org/entry/232220", "name": "Glycogen storage disease 1B", "description": "Glycogen storage disease 1B" } ], "unlinked_id_list": [], "evidence": [ { "id": "232220", "database": "MIM", "url": "https://www.omim.org/entry/232220" }, { "id": "0081330", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:0081330" } ] }, { "disease_id": "DOID:0081331", "recommended_name": { "id": "DOID:0081331", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0081331", "name": "glycogen storage disease Ic", "description": "A glycogen storage disease I that has_material_basis_in homozygous or compound heterozygous mutation in the G6PT1 gene (SLC37A4), which encodes glucose-6-phosphate translocase, on chromosome 11q23. G6PT1 is also the site of the defect in glycogen storage disease Ib." }, "synonyms": [ { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease Ib", "description": "A type of glycogenosis due to G6P deficiency." }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "G6P deficiency type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "G6P translocase deficiency", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "G6PT deficiency", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD Ib", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD due to G6P deficiency type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD due to G6PT deficiency", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD type 1 non a", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD type 1b", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD1B", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSDIb", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glucose-6-phosphate transport defect", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease Ib", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease Ic", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease due to G6P deficiency type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease type 1b", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease type I non-a", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease type Ic", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogenosis due to glucose-6-phosphatase deficiency type 1B", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogenosis due to glucose-6-phosphatase transport defect type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogenosis type 1b", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogenosis type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD1C", "description": "" }, { "id": "MIM:232240", "resource": "MIM", "url": "https://www.omim.org/entry/232240", "name": "Glycogen storage disease 1C", "description": "Glycogen storage disease 1C" } ], "unlinked_id_list": [], "evidence": [ { "id": "0009288", "database": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288" }, { "id": "232240", "database": "MIM", "url": "https://www.omim.org/entry/232240" }, { "id": "0081331", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:0081331" } ] } ], "keywords": [ "biomuta", "somatic", "cancer", "disease", "ebi", "germline" ], "filter_code": "010000000000000000000.00000000000000.000000000001000000.00001.11.000.000", "uniprot_canonical_ac": "O43826-1" } ], "record_id": "pubmed.32884905", "abstract": "", "glycosylation": [], "mutagenesis": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A novel SLC37A4 missense mutation in GSD-Ib without hepatomegaly causes enhanced leukocytes endoplasmic reticulum stress and apoptosis.", "journal": "Molecular genetics & genomic medicine", "date": "2021", "authors": "Xu Q, Tang H, Duan L, Zuo X, Shi X, Li Y, Zhao H, Zhang H", "reference": { "type": "PubMed", "id": "33280276", "url": "https://pubmed.ncbi.nlm.nih.gov/33280276" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O43826-1", "protein_name": "Glucose-6-phosphate exchanger SLC37A4", "gene_name": "SLC37A4", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O43826", "url": "https://www.uniprot.org/uniprotkb/O43826" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.33280276", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "SLC37A4-CDG: Second patient.", "journal": "JIMD reports", "date": "2021", "authors": "Wilson MP, Quelhas D, Leao-Teles E, Sturiale L, Rymen D, Keldermans L, Race V, Souche E, Rodrigues E, Campos T, Van Schaftingen E, Foulquier F, Garozzo D, Matthijs G, Jaeken J", "reference": { "type": "PubMed", "id": "33728255", "url": "https://pubmed.ncbi.nlm.nih.gov/33728255" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O43826-1", "protein_name": "Glucose-6-phosphate exchanger SLC37A4", "gene_name": "SLC37A4", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O43826", "url": "https://www.uniprot.org/uniprotkb/O43826" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "snv": [ { "evidence": [ { "id": "O43826", "database": "BioMuta", "url": "https://hivelab.biochemistry.gwu.edu/biomuta/proteinview/O43826" }, { "id": "rs2134626266", "database": "dbSNP", "url": "https://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?type=rs&rs=rs2134626266" }, { "id": "rs2134626266", "database": "ENSEMBL", "url": "https://www.ensembl.org/id/rs2134626266" }, { "id": "32884905", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/32884905" }, { "id": "33728255", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/33728255" }, { "id": "33964207", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/33964207" } ], "glycoeffect": [], "start_pos": 423, "end_pos": 423, "subjects_tested": "1704", "subjects_positive": "1", "frequency": "0.1", "sequence_org": "R", "sequence_mut": "*", "comment": "Somatic mutation passed 1 filters: protein-of-interest(glycogene, carbohydrate synthesis and metabolism/transporter).", "chr_id": "11", "chr_pos": "119024933", "ref_nt": "G", "alt_nt": "A", "minor_allelic_frequency": "", "site_lbl": "R423", "disease": [ { "disease_id": "DOID:363", "recommended_name": { "id": "DOID:363", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:363", "name": "uterine cancer", "description": "A female reproductive organ cancer that is located_in the uterus." }, "synonyms": [ { "id": "DOID:363", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:363", "name": "CA - cancer of uterus", "description": "" }, { "id": "DOID:363", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:363", "name": "Tumour of uterus", "description": "" }, { "id": "DOID:363", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:363", "name": "malignant neoplasm of uterus", "description": "" }, { "id": "DOID:363", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:363", "name": "malignant uterine tumor", "description": "" }, { "id": "DOID:363", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:363", "name": "neoplasm of uterus", "description": "" }, { "id": "DOID:363", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:363", "name": "uterine tumor", "description": "" }, { "id": "DOID:363", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:363", "name": "uterus neoplasm", "description": "" } ], "unlinked_id_list": [ "DOID:9460", "DOID:5166", "DOID:2021", "DOID:4114" ], "evidence": [ { "id": "363", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:363" } ] }, { "disease_id": "DOID:0051051", "recommended_name": { "id": "DOID:0051051", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0051051", "name": "congenital disorder of glycosylation type IIw", "description": "A congenital disorder of glycosylation type II that is characterized by liver dysfunction, coagulation deficiencies, and profound abnormalities in N-glycosylation of serum specific proteins and that has_material_basis_in heterozygous mutation in the G6PT1 gene (SLC37A4), which encodes glucose-6-phosphate translocase, on chromosome 11q23." }, "synonyms": [ { "id": "MONDO:0030437", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0030437", "name": "congenital disorder of glycosylation, type IIw", "description": "" }, { "id": "MONDO:0030437", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0030437", "name": "CDG2W", "description": "" }, { "id": "MIM:619525", "resource": "MIM", "url": "https://www.omim.org/entry/619525", "name": "Congenital disorder of glycosylation 2W", "description": "Congenital disorder of glycosylation 2W" } ], "unlinked_id_list": [], "evidence": [ { "id": "619525", "database": "MIM", "url": "https://www.omim.org/entry/619525" }, { "id": "SLC37A4", "database": "Genomics England", "url": "https://panelapp.genomicsengland.co.uk/panels/25/gene/SLC37A4/#!details" }, { "id": "0051051", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:0051051" } ] }, { "disease_id": "DOID:0081330", "recommended_name": { "id": "DOID:0081330", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0081330", "name": "glycogen storage disease Ib", "description": "A glycogen storage disease I that has_material_basis_in homozygous or compound heterozygous mutation in the G6PT1 gene (SLC37A4), which encodes glucose-6-phosphate translocase, on chromosome 11q23." }, "synonyms": [ { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease Ib", "description": "A type of glycogenosis due to G6P deficiency." }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "G6P deficiency type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "G6P translocase deficiency", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "G6PT deficiency", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD Ib", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD due to G6P deficiency type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD due to G6PT deficiency", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD type 1 non a", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD type 1b", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD1B", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSDIb", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glucose-6-phosphate transport defect", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease Ib", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease Ic", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease due to G6P deficiency type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease type 1b", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease type I non-a", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease type Ic", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogenosis due to glucose-6-phosphatase deficiency type 1B", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogenosis due to glucose-6-phosphatase transport defect type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogenosis type 1b", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogenosis type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD1C", "description": "" }, { "id": "MIM:232220", "resource": "MIM", "url": "https://www.omim.org/entry/232220", "name": "Glycogen storage disease 1B", "description": "Glycogen storage disease 1B" } ], "unlinked_id_list": [], "evidence": [ { "id": "232220", "database": "MIM", "url": "https://www.omim.org/entry/232220" }, { "id": "0081330", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:0081330" } ] }, { "disease_id": "DOID:0081331", "recommended_name": { "id": "DOID:0081331", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0081331", "name": "glycogen storage disease Ic", "description": "A glycogen storage disease I that has_material_basis_in homozygous or compound heterozygous mutation in the G6PT1 gene (SLC37A4), which encodes glucose-6-phosphate translocase, on chromosome 11q23. G6PT1 is also the site of the defect in glycogen storage disease Ib." }, "synonyms": [ { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease Ib", "description": "A type of glycogenosis due to G6P deficiency." }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "G6P deficiency type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "G6P translocase deficiency", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "G6PT deficiency", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD Ib", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD due to G6P deficiency type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD due to G6PT deficiency", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD type 1 non a", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD type 1b", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD1B", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSDIb", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glucose-6-phosphate transport defect", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease Ib", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease Ic", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease due to G6P deficiency type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease type 1b", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease type I non-a", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease type Ic", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogenosis due to glucose-6-phosphatase deficiency type 1B", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogenosis due to glucose-6-phosphatase transport defect type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogenosis type 1b", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogenosis type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD1C", "description": "" }, { "id": "MIM:232240", "resource": "MIM", "url": "https://www.omim.org/entry/232240", "name": "Glycogen storage disease 1C", "description": "Glycogen storage disease 1C" } ], "unlinked_id_list": [], "evidence": [ { "id": "0009288", "database": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288" }, { "id": "232240", "database": "MIM", "url": "https://www.omim.org/entry/232240" }, { "id": "0081331", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:0081331" } ] } ], "keywords": [ "biomuta", "somatic", "cancer", "disease", "ebi", "germline" ], "filter_code": "010000000000000000000.00000000000000.000000000001000000.00001.11.000.000", "uniprot_canonical_ac": "O43826-1" } ], "record_id": "pubmed.33728255", "abstract": "", "glycosylation": [], "mutagenesis": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A mutation in SLC37A4 causes a dominantly inherited congenital disorder of glycosylation characterized by liver dysfunction.", "journal": "American journal of human genetics", "date": "2021", "authors": "Ng BG, Sosicka P, Fenaille F, Harroche A, Vuillaumier-Barrot S, Porterfield M, Xia ZJ, Wagner S, Bamshad MJ, Vergnes-Boiteux MC, Cholet S, Dalton S, Dell A, Dupre T, Fiore M, Haslam SM, Huguenin Y, Kumagai T, Kulik M, McGoogan K, Michot C, Nickerson DA, Pascreau T, Borgel D, Raymond K, Warad D, Flanagan-Steet H, Steet R, Tiemeyer M, Seta N, Bruneel A, Freeze HH", "reference": { "type": "PubMed", "id": "33964207", "url": "https://pubmed.ncbi.nlm.nih.gov/33964207" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O43826-1", "protein_name": "Glucose-6-phosphate exchanger SLC37A4", "gene_name": "SLC37A4", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O43826", "url": "https://www.uniprot.org/uniprotkb/O43826" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "snv": [ { "evidence": [ { "id": "O43826", "database": "BioMuta", "url": "https://hivelab.biochemistry.gwu.edu/biomuta/proteinview/O43826" }, { "id": "rs2134626266", "database": "dbSNP", "url": "https://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?type=rs&rs=rs2134626266" }, { "id": "rs2134626266", "database": "ENSEMBL", "url": "https://www.ensembl.org/id/rs2134626266" }, { "id": "32884905", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/32884905" }, { "id": "33728255", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/33728255" }, { "id": "33964207", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/33964207" } ], "glycoeffect": [], "start_pos": 423, "end_pos": 423, "subjects_tested": "1704", "subjects_positive": "1", "frequency": "0.1", "sequence_org": "R", "sequence_mut": "*", "comment": "Somatic mutation passed 1 filters: protein-of-interest(glycogene, carbohydrate synthesis and metabolism/transporter).", "chr_id": "11", "chr_pos": "119024933", "ref_nt": "G", "alt_nt": "A", "minor_allelic_frequency": "", "site_lbl": "R423", "disease": [ { "disease_id": "DOID:363", "recommended_name": { "id": "DOID:363", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:363", "name": "uterine cancer", "description": "A female reproductive organ cancer that is located_in the uterus." }, "synonyms": [ { "id": "DOID:363", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:363", "name": "CA - cancer of uterus", "description": "" }, { "id": "DOID:363", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:363", "name": "Tumour of uterus", "description": "" }, { "id": "DOID:363", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:363", "name": "malignant neoplasm of uterus", "description": "" }, { "id": "DOID:363", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:363", "name": "malignant uterine tumor", "description": "" }, { "id": "DOID:363", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:363", "name": "neoplasm of uterus", "description": "" }, { "id": "DOID:363", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:363", "name": "uterine tumor", "description": "" }, { "id": "DOID:363", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:363", "name": "uterus neoplasm", "description": "" } ], "unlinked_id_list": [ "DOID:9460", "DOID:5166", "DOID:2021", "DOID:4114" ], "evidence": [ { "id": "363", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:363" } ] }, { "disease_id": "DOID:0051051", "recommended_name": { "id": "DOID:0051051", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0051051", "name": "congenital disorder of glycosylation type IIw", "description": "A congenital disorder of glycosylation type II that is characterized by liver dysfunction, coagulation deficiencies, and profound abnormalities in N-glycosylation of serum specific proteins and that has_material_basis_in heterozygous mutation in the G6PT1 gene (SLC37A4), which encodes glucose-6-phosphate translocase, on chromosome 11q23." }, "synonyms": [ { "id": "MONDO:0030437", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0030437", "name": "congenital disorder of glycosylation, type IIw", "description": "" }, { "id": "MONDO:0030437", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0030437", "name": "CDG2W", "description": "" }, { "id": "MIM:619525", "resource": "MIM", "url": "https://www.omim.org/entry/619525", "name": "Congenital disorder of glycosylation 2W", "description": "Congenital disorder of glycosylation 2W" } ], "unlinked_id_list": [], "evidence": [ { "id": "619525", "database": "MIM", "url": "https://www.omim.org/entry/619525" }, { "id": "SLC37A4", "database": "Genomics England", "url": "https://panelapp.genomicsengland.co.uk/panels/25/gene/SLC37A4/#!details" }, { "id": "0051051", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:0051051" } ] }, { "disease_id": "DOID:0081330", "recommended_name": { "id": "DOID:0081330", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0081330", "name": "glycogen storage disease Ib", "description": "A glycogen storage disease I that has_material_basis_in homozygous or compound heterozygous mutation in the G6PT1 gene (SLC37A4), which encodes glucose-6-phosphate translocase, on chromosome 11q23." }, "synonyms": [ { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease Ib", "description": "A type of glycogenosis due to G6P deficiency." }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "G6P deficiency type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "G6P translocase deficiency", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "G6PT deficiency", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD Ib", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD due to G6P deficiency type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD due to G6PT deficiency", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD type 1 non a", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD type 1b", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD1B", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSDIb", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glucose-6-phosphate transport defect", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease Ib", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease Ic", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease due to G6P deficiency type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease type 1b", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease type I non-a", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease type Ic", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogenosis due to glucose-6-phosphatase deficiency type 1B", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogenosis due to glucose-6-phosphatase transport defect type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogenosis type 1b", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogenosis type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD1C", "description": "" }, { "id": "MIM:232220", "resource": "MIM", "url": "https://www.omim.org/entry/232220", "name": "Glycogen storage disease 1B", "description": "Glycogen storage disease 1B" } ], "unlinked_id_list": [], "evidence": [ { "id": "232220", "database": "MIM", "url": "https://www.omim.org/entry/232220" }, { "id": "0081330", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:0081330" } ] }, { "disease_id": "DOID:0081331", "recommended_name": { "id": "DOID:0081331", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0081331", "name": "glycogen storage disease Ic", "description": "A glycogen storage disease I that has_material_basis_in homozygous or compound heterozygous mutation in the G6PT1 gene (SLC37A4), which encodes glucose-6-phosphate translocase, on chromosome 11q23. G6PT1 is also the site of the defect in glycogen storage disease Ib." }, "synonyms": [ { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease Ib", "description": "A type of glycogenosis due to G6P deficiency." }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "G6P deficiency type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "G6P translocase deficiency", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "G6PT deficiency", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD Ib", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD due to G6P deficiency type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD due to G6PT deficiency", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD type 1 non a", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD type 1b", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD1B", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSDIb", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glucose-6-phosphate transport defect", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease Ib", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease Ic", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease due to G6P deficiency type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease type 1b", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease type I non-a", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease type Ic", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogenosis due to glucose-6-phosphatase deficiency type 1B", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogenosis due to glucose-6-phosphatase transport defect type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogenosis type 1b", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogenosis type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD1C", "description": "" }, { "id": "MIM:232240", "resource": "MIM", "url": "https://www.omim.org/entry/232240", "name": "Glycogen storage disease 1C", "description": "Glycogen storage disease 1C" } ], "unlinked_id_list": [], "evidence": [ { "id": "0009288", "database": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288" }, { "id": "232240", "database": "MIM", "url": "https://www.omim.org/entry/232240" }, { "id": "0081331", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:0081331" } ] } ], "keywords": [ "biomuta", "somatic", "cancer", "disease", "ebi", "germline" ], "filter_code": "010000000000000000000.00000000000000.000000000001000000.00001.11.000.000", "uniprot_canonical_ac": "O43826-1" } ], "record_id": "pubmed.33964207", "abstract": "", "glycosylation": [], "mutagenesis": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Three novel SLC37A4 variants in glycogen storage disease type 1b and a literature review.", "journal": "The Journal of international medical research", "date": "2023-12", "authors": "Wang Zhuolin, Zhao Ruiqin, Jia Xiaoyun, Li Xiaolei, Ma Li, Fu Haiyan", "reference": { "type": "PubMed", "id": "38087503", "url": "https://pubmed.ncbi.nlm.nih.gov/38087503" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O43826-1", "protein_name": "Glucose-6-phosphate exchanger SLC37A4", "gene_name": "SLC37A4", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O43826", "url": "https://www.uniprot.org/uniprotkb/O43826" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.38087503", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "SLC37A4, gene responsible for glycogen storage disease type 1b, regulates gingival epithelial barrier function via JAM1 expression.", "journal": "Scientific reports", "date": "2024-10-22", "authors": "Tanigaki Keita, Matsumura Risako, Sasaki Naoko, Kato Yuta, Tamamori Tsukasa, Yamaga Shunsuke, Nakamura Eriko, Sakanaka Akito, Kuboniwa Masae, Matsusaki Michiya, Amano Atsuo, Takeuchi Hiroki", "reference": { "type": "PubMed", "id": "39433915", "url": "https://pubmed.ncbi.nlm.nih.gov/39433915" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O43826-1", "protein_name": "Glucose-6-phosphate exchanger SLC37A4", "gene_name": "SLC37A4", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O43826", "url": "https://www.uniprot.org/uniprotkb/O43826" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.39433915", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structural basis for transport and inhibition of the human glucose-6-phosphate transporter G6PT.", "journal": "Nature communications", "date": "2025-10-24", "authors": "Xia Zhanyi, Wang Yaqi, Wu Di, Chi Cheng, Li Chen, Chen Ligong, Jiang Daohua", "reference": { "type": "PubMed", "id": "41136424", "url": "https://pubmed.ncbi.nlm.nih.gov/41136424" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O43826-1", "protein_name": "Glucose-6-phosphate exchanger SLC37A4", "gene_name": "SLC37A4", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O43826", "url": "https://www.uniprot.org/uniprotkb/O43826" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 166, "end_pos": 166, "sequence_org": "R", "sequence_mut": "L", "comment": "Impairs glucose-6-phosphate uptake.", "evidence": [ { "database": "UniProtKB", "id": "O43826", "url": "https://www.uniprot.org/uniprotkb/O43826" }, { "database": "PubMed", "id": "41136424", "url": "https://pubmed.ncbi.nlm.nih.gov/41136424" } ], "uniprot_canonical_ac": "O43826-1" }, { "start_pos": 240, "end_pos": 240, "sequence_org": "K", "sequence_mut": "A", "comment": "Impairs glucose-6-phosphate uptake.", "evidence": [ { "database": "UniProtKB", "id": "O43826", "url": "https://www.uniprot.org/uniprotkb/O43826" }, { "database": "PubMed", "id": "41136424", "url": "https://pubmed.ncbi.nlm.nih.gov/41136424" } ], "uniprot_canonical_ac": "O43826-1" }, { "start_pos": 240, "end_pos": 240, "sequence_org": "K", "sequence_mut": "C", "comment": "Impairs glucose-6-phosphate uptake.", "evidence": [ { "database": "UniProtKB", "id": "O43826", "url": "https://www.uniprot.org/uniprotkb/O43826" }, { "database": "PubMed", "id": "41136424", "url": "https://pubmed.ncbi.nlm.nih.gov/41136424" } ], "uniprot_canonical_ac": "O43826-1" }, { "start_pos": 285, "end_pos": 285, "sequence_org": "D", "sequence_mut": "A", "comment": "Impairs glucose-6-phosphate uptake.", "evidence": [ { "database": "UniProtKB", "id": "O43826", "url": "https://www.uniprot.org/uniprotkb/O43826" }, { "database": "PubMed", "id": "41136424", "url": "https://pubmed.ncbi.nlm.nih.gov/41136424" } ], "uniprot_canonical_ac": "O43826-1" }, { "start_pos": 28, "end_pos": 28, "sequence_org": "R", "sequence_mut": "A", "comment": "Impairs glucose-6-phosphate uptake.", "evidence": [ { "database": "UniProtKB", "id": "O43826", "url": "https://www.uniprot.org/uniprotkb/O43826" }, { "database": "PubMed", "id": "41136424", "url": "https://pubmed.ncbi.nlm.nih.gov/41136424" }, { "database": "PubMed", "id": "41225049", "url": "https://pubmed.ncbi.nlm.nih.gov/41225049" } ], "uniprot_canonical_ac": "O43826-1" }, { "start_pos": 72, "end_pos": 72, "sequence_org": "D", "sequence_mut": "A", "comment": "Impairs glucose-6-phosphate uptake.", "evidence": [ { "database": "UniProtKB", "id": "O43826", "url": "https://www.uniprot.org/uniprotkb/O43826" }, { "database": "PubMed", "id": "41136424", "url": "https://pubmed.ncbi.nlm.nih.gov/41136424" } ], "uniprot_canonical_ac": "O43826-1" } ], "record_id": "pubmed.41136424", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structural basis of G6P/Pi transport and inhibition in SLC37A4.", "journal": "Nature structural & molecular biology", "date": "2026-01", "authors": "Zhou Dong, Zhang Yang, Chen Nanhao, Huang Shitang, Song Chen, Zhang Zhe", "reference": { "type": "PubMed", "id": "41225049", "url": "https://pubmed.ncbi.nlm.nih.gov/41225049" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O43826-1", "protein_name": "Glucose-6-phosphate exchanger SLC37A4", "gene_name": "SLC37A4", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O43826", "url": "https://www.uniprot.org/uniprotkb/O43826" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 118, "end_pos": 118, "sequence_org": "W", "sequence_mut": "A", "comment": "Impairs glucose-6-phosphate uptake.", "evidence": [ { "database": "UniProtKB", "id": "O43826", "url": "https://www.uniprot.org/uniprotkb/O43826" }, { "database": "PubMed", "id": "41225049", "url": "https://pubmed.ncbi.nlm.nih.gov/41225049" } ], "uniprot_canonical_ac": "O43826-1" }, { "start_pos": 21, "end_pos": 21, "sequence_org": "Y", "sequence_mut": "A", "comment": "Impairs glucose-6-phosphate uptake.", "evidence": [ { "database": "UniProtKB", "id": "O43826", "url": "https://www.uniprot.org/uniprotkb/O43826" }, { "database": "PubMed", "id": "41225049", "url": "https://pubmed.ncbi.nlm.nih.gov/41225049" } ], "uniprot_canonical_ac": "O43826-1" }, { "start_pos": 25, "end_pos": 25, "sequence_org": "Y", "sequence_mut": "A", "comment": "Impairs glucose-6-phosphate uptake.", "evidence": [ { "database": "UniProtKB", "id": "O43826", "url": "https://www.uniprot.org/uniprotkb/O43826" }, { "database": "PubMed", "id": "41225049", "url": "https://pubmed.ncbi.nlm.nih.gov/41225049" } ], "uniprot_canonical_ac": "O43826-1" }, { "start_pos": 28, "end_pos": 28, "sequence_org": "R", "sequence_mut": "A", "comment": "Impairs glucose-6-phosphate uptake.", "evidence": [ { "database": "UniProtKB", "id": "O43826", "url": "https://www.uniprot.org/uniprotkb/O43826" }, { "database": "PubMed", "id": "41136424", "url": "https://pubmed.ncbi.nlm.nih.gov/41136424" }, { "database": "PubMed", "id": "41225049", "url": "https://pubmed.ncbi.nlm.nih.gov/41225049" } ], "uniprot_canonical_ac": "O43826-1" }, { "start_pos": 60, "end_pos": 60, "sequence_org": "Y", "sequence_mut": "A", "comment": "Impairs glucose-6-phosphate uptake.", "evidence": [ { "database": "UniProtKB", "id": "O43826", "url": "https://www.uniprot.org/uniprotkb/O43826" }, { "database": "PubMed", "id": "41225049", "url": "https://pubmed.ncbi.nlm.nih.gov/41225049" } ], "uniprot_canonical_ac": "O43826-1" } ], "record_id": "pubmed.41225049", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular analysis of glycogen storage disease type Ib: identification of a prevalent mutation among Japanese patients and assignment of a putative glucose-6-phosphate translocase gene to chromosome 11.", "journal": "Biochemical and biophysical research communications", "date": "1998", "authors": "Kure S, Suzuki Y, Matsubara Y, Sakamoto O, Shintaku H, Isshiki G, Hoshida C, Izumi I, Sakura N, Narisawa K", "reference": { "type": "PubMed", "id": "9675154", "url": "https://pubmed.ncbi.nlm.nih.gov/9675154" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O43826-1", "protein_name": "Glucose-6-phosphate exchanger SLC37A4", "gene_name": "SLC37A4", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O43826", "url": "https://www.uniprot.org/uniprotkb/O43826" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "snv": [ { "evidence": [ { "id": "rs80356489", "database": "dbSNP", "url": "https://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?type=rs&rs=rs80356489" }, { "id": "rs80356489", "database": "TOPMed", "url": "https://www.ncbi.nlm.nih.gov/snp/rs80356489#frequency_tab" }, { "id": "rs80356489", "database": "gnomAD", "url": "http://gnomad.broadinstitute.org/awesome?query=rs80356489" }, { "id": "10482875", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10482875" }, { "id": "9675154", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/9675154" } ], "glycoeffect": [], "start_pos": 118, "end_pos": 118, "sequence_org": "W", "sequence_mut": "R", "comment": "Germline mutation passed 1 filters: glycogene of type=glycogene, carbohydrate synthesis and metabolism/transporter.", "chr_id": "11", "chr_pos": "119028223", "ref_nt": "G", "alt_nt": "null", "minor_allelic_frequency": "", "site_lbl": "W118", "disease": [ { "disease_id": "DOID:0081330", "recommended_name": { "id": "DOID:0081330", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0081330", "name": "glycogen storage disease Ib", "description": "A glycogen storage disease I that has_material_basis_in homozygous or compound heterozygous mutation in the G6PT1 gene (SLC37A4), which encodes glucose-6-phosphate translocase, on chromosome 11q23." }, "synonyms": [ { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease Ib", "description": "A type of glycogenosis due to G6P deficiency." }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "G6P deficiency type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "G6P translocase deficiency", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "G6PT deficiency", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD Ib", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD due to G6P deficiency type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD due to G6PT deficiency", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD type 1 non a", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD type 1b", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD1B", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSDIb", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glucose-6-phosphate transport defect", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease Ib", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease Ic", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease due to G6P deficiency type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease type 1b", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease type I non-a", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease type Ic", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogenosis due to glucose-6-phosphatase deficiency type 1B", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogenosis due to glucose-6-phosphatase transport defect type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogenosis type 1b", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogenosis type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD1C", "description": "" }, { "id": "MIM:232220", "resource": "MIM", "url": "https://www.omim.org/entry/232220", "name": "Glycogen storage disease 1B", "description": "Glycogen storage disease 1B" } ], "unlinked_id_list": [], "evidence": [ { "id": "232220", "database": "MIM", "url": "https://www.omim.org/entry/232220" }, { "id": "0081330", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:0081330" } ] } ], "keywords": [ "ebi", "germline", "disease" ], "filter_code": "000000000000000001000.00000000000000.000000000001000000.00101.10.000.000", "uniprot_canonical_ac": "O43826-1" }, { "evidence": [ { "id": "rs2134631619", "database": "dbSNP", "url": "https://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?type=rs&rs=rs2134631619" }, { "id": "rs2134631556", "database": "dbSNP", "url": "https://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?type=rs&rs=rs2134631556" }, { "id": "9675154", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/9675154" } ], "glycoeffect": [], "start_pos": 309, "end_pos": 309, "sequence_org": "A", "sequence_mut": "null", "comment": "Germline mutation passed 1 filters: glycogene of type=glycogene, carbohydrate synthesis and metabolism/transporter.", "chr_id": "11", "chr_pos": "119026027", "ref_nt": "l", "alt_nt": "null", "minor_allelic_frequency": "", "site_lbl": "A309", "disease": [ { "disease_id": "DOID:0081330", "recommended_name": { "id": "DOID:0081330", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0081330", "name": "glycogen storage disease Ib", "description": "A glycogen storage disease I that has_material_basis_in homozygous or compound heterozygous mutation in the G6PT1 gene (SLC37A4), which encodes glucose-6-phosphate translocase, on chromosome 11q23." }, "synonyms": [ { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease Ib", "description": "A type of glycogenosis due to G6P deficiency." }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "G6P deficiency type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "G6P translocase deficiency", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "G6PT deficiency", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD Ib", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD due to G6P deficiency type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD due to G6PT deficiency", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD type 1 non a", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD type 1b", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD1B", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSDIb", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glucose-6-phosphate transport defect", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease Ib", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease Ic", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease due to G6P deficiency type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease type 1b", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease type I non-a", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogen storage disease type Ic", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogenosis due to glucose-6-phosphatase deficiency type 1B", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogenosis due to glucose-6-phosphatase transport defect type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogenosis type 1b", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "glycogenosis type IB", "description": "" }, { "id": "MONDO:0009288", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009288", "name": "GSD1C", "description": "" }, { "id": "MIM:232220", "resource": "MIM", "url": "https://www.omim.org/entry/232220", "name": "Glycogen storage disease 1B", "description": "Glycogen storage disease 1B" } ], "unlinked_id_list": [], "evidence": [ { "id": "232220", "database": "MIM", "url": "https://www.omim.org/entry/232220" }, { "id": "0081330", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:0081330" } ] } ], "keywords": [ "ebi", "germline", "disease" ], "filter_code": "100000000000000000000.00000000000000.000000000001000000.00001.10.000.000", "uniprot_canonical_ac": "O43826-1" } ], "record_id": "pubmed.9675154", "abstract": "", "glycosylation": [], "mutagenesis": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structure and mutation analysis of the glycogen storage disease type 1b gene.", "journal": "FEBS letters", "date": "1998", "authors": "Marcolongo P, Barone V, Priori G, Pirola B, Giglio S, Biasucci G, Zammarchi E, Parenti G, Burchell A, Benedetti A, Sorrentino V", "reference": { "type": "PubMed", "id": "9781688", "url": "https://pubmed.ncbi.nlm.nih.gov/9781688" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O43826-1", "protein_name": "Glucose-6-phosphate exchanger SLC37A4", "gene_name": "SLC37A4", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O43826", "url": "https://www.uniprot.org/uniprotkb/O43826" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9781688", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Genomic structure of the human glucose 6-phosphate translocase gene and novel mutations in the gene of a Japanese patient with glycogen storage disease type Ib.", "journal": "Human genetics", "date": "1998", "authors": "Ihara K, Kuromaru R, Hara T", "reference": { "type": "PubMed", "id": "9856496", "url": "https://pubmed.ncbi.nlm.nih.gov/9856496" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O43826-1", "protein_name": "Glucose-6-phosphate exchanger SLC37A4", "gene_name": "SLC37A4", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O43826", "url": "https://www.uniprot.org/uniprotkb/O43826" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9856496", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The common P446L polymorphism in GCKR inversely modulates fasting glucose and triglyceride levels and reduces type 2 diabetes risk in the DESIR prospective general French population.", "journal": "Diabetes", "date": "2008", "authors": "Vaxillaire M, Cavalcanti-Proenca C, Dechaume A, Tichet J, Marre M, Balkau B, Froguel P", "reference": { "type": "PubMed", "id": "18556336", "url": "https://pubmed.ncbi.nlm.nih.gov/18556336" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q14397-1", "protein_name": "Glucokinase regulatory protein", "gene_name": "GCKR", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q14397", "url": "https://www.uniprot.org/uniprotkb/Q14397" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.18556336", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Common missense variant in the glucokinase regulatory protein gene is associated with increased plasma triglyceride and C-reactive protein but lower fasting glucose concentrations.", "journal": "Diabetes", "date": "2008", "authors": "Orho-Melander M, Melander O, Guiducci C, Perez-Martinez P, Corella D, Roos C, Tewhey R, Rieder MJ, Hall J, Abecasis G, Tai ES, Welch C, Arnett DK, Lyssenko V, Lindholm E, Saxena R, de Bakker PI, Burtt N, Voight BF, Hirschhorn JN, Tucker KL, Hedner T, Tuomi T, Isomaa B, Eriksson KF, Taskinen MR, Wahlstrand B, Hughes TE, Parnell LD, Lai CQ, Berglund G, Peltonen L, Vartiainen E, Jousilahti P, Havulinna AS, Salomaa V, Nilsson P, Groop L, Altshuler D, Ordovas JM, Kathiresan S", "reference": { "type": "PubMed", "id": "18678614", "url": "https://pubmed.ncbi.nlm.nih.gov/18678614" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q14397-1", "protein_name": "Glucokinase regulatory protein", "gene_name": "GCKR", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q14397", "url": "https://www.uniprot.org/uniprotkb/Q14397" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.18678614", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The P446L variant in GCKR associated with fasting plasma glucose and triglyceride levels exerts its effect through increased glucokinase activity in liver.", "journal": "Human molecular genetics", "date": "2009", "authors": "Beer NL, Tribble ND, McCulloch LJ, Roos C, Johnson PR, Orho-Melander M, Gloyn AL", "reference": { "type": "PubMed", "id": "19643913", "url": "https://pubmed.ncbi.nlm.nih.gov/19643913" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q14397-1", "protein_name": "Glucokinase regulatory protein", "gene_name": "GCKR", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q14397", "url": "https://www.uniprot.org/uniprotkb/Q14397" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.19643913", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Crystal structure of glucokinase regulatory protein.", "journal": "Biochemistry", "date": "2013", "authors": "Pautsch A, Stadler N, Lohle A, Rist W, Berg A, Glocker L, Nar H, Reinert D, Lenter M, Heckel A, Schnapp G, Kauschke SG", "reference": { "type": "PubMed", "id": "23621087", "url": "https://pubmed.ncbi.nlm.nih.gov/23621087" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q14397-1", "protein_name": "Glucokinase regulatory protein", "gene_name": "GCKR", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q14397", "url": "https://www.uniprot.org/uniprotkb/Q14397" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 326, "end_pos": 327, "sequence_org": "KK", "sequence_mut": "TT", "comment": "No effect on inhibition of glucokinase.", "evidence": [ { "database": "UniProtKB", "id": "Q14397", "url": "https://www.uniprot.org/uniprotkb/Q14397" }, { "database": "PubMed", "id": "23621087", "url": "https://pubmed.ncbi.nlm.nih.gov/23621087" } ], "uniprot_canonical_ac": "Q14397-1" }, { "start_pos": 450, "end_pos": 451, "sequence_org": "KK", "sequence_mut": "TT", "comment": "Impairs inhibition of glucokinase.", "evidence": [ { "database": "UniProtKB", "id": "Q14397", "url": "https://www.uniprot.org/uniprotkb/Q14397" }, { "database": "PubMed", "id": "23621087", "url": "https://pubmed.ncbi.nlm.nih.gov/23621087" } ], "uniprot_canonical_ac": "Q14397-1" } ], "record_id": "pubmed.23621087", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular basis for the role of glucokinase regulatory protein as the allosteric switch for glucokinase.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2013", "authors": "Choi JM, Seo MH, Kyeong HH, Kim E, Kim HS", "reference": { "type": "PubMed", "id": "23733961", "url": "https://pubmed.ncbi.nlm.nih.gov/23733961" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q14397-1", "protein_name": "Glucokinase regulatory protein", "gene_name": "GCKR", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q14397", "url": "https://www.uniprot.org/uniprotkb/Q14397" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 413, "end_pos": 413, "sequence_org": "D", "sequence_mut": "A", "comment": "Impairs inhibition of glucokinase.", "evidence": [ { "database": "UniProtKB", "id": "Q14397", "url": "https://www.uniprot.org/uniprotkb/Q14397" }, { "database": "PubMed", "id": "23733961", "url": "https://pubmed.ncbi.nlm.nih.gov/23733961" } ], "uniprot_canonical_ac": "Q14397-1" }, { "start_pos": 463, "end_pos": 465, "sequence_org": "LLF", "sequence_mut": "ALA", "comment": "Abolishes interaction with GCK. Abolishes inhibition of GCK.", "evidence": [ { "database": "UniProtKB", "id": "Q14397", "url": "https://www.uniprot.org/uniprotkb/Q14397" }, { "database": "PubMed", "id": "23733961", "url": "https://pubmed.ncbi.nlm.nih.gov/23733961" } ], "uniprot_canonical_ac": "Q14397-1" } ], "record_id": "pubmed.23733961", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "GCKR and ADIPOQ gene polymorphisms in women with gestational diabetes mellitus.", "journal": "Acta diabetologica", "date": "2023-07-31", "authors": "Zhu Manning, Lv Yaer, Peng Yanqing, Wu Yingnan, Feng Yanan, Jia Tianshuang, Xu Songcheng, Li Songxue, Wang Wei, Tian Jiawei, Sun Litao", "reference": { "type": "PubMed", "id": "37524927", "url": "https://pubmed.ncbi.nlm.nih.gov/37524927" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q14397-1", "protein_name": "Glucokinase regulatory protein", "gene_name": "GCKR", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q14397", "url": "https://www.uniprot.org/uniprotkb/Q14397" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.37524927", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Interaction between the GCKR rs1260326 variant and serum HDL cholesterol contributes to HOMA-\u03b2 and ISIMatusda in the middle-aged T2D individuals.", "journal": "Journal of human genetics", "date": "2023-08-31", "authors": "Shen Min, Jiang Liying, Liu Hechun, Dai Hao, Jiang Hemin, Qian Yu, Wang Zhixiao, Zheng Shuai, Chen Heng, Yang Tao, Fu Qi, Xu Kuanfeng", "reference": { "type": "PubMed", "id": "37648893", "url": "https://pubmed.ncbi.nlm.nih.gov/37648893" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q14397-1", "protein_name": "Glucokinase regulatory protein", "gene_name": "GCKR", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q14397", "url": "https://www.uniprot.org/uniprotkb/Q14397" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.37648893", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Prevalence of GCKR rs1260326 Variant in Subjects with Obesity Associated NAFLD and T2DM: A Case-Control Study in South Punjab, Pakistan.", "journal": "Journal of obesity", "date": "2023", "authors": "Nisar Tayyaba, Arshad Kashan, Abbas Zahid, Khan Maira Ali, Safdar Sohail, Shaikh Rehan Sadiq, Saeed Ali", "reference": { "type": "PubMed", "id": "37829557", "url": "https://pubmed.ncbi.nlm.nih.gov/37829557" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q14397-1", "protein_name": "Glucokinase regulatory protein", "gene_name": "GCKR", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q14397", "url": "https://www.uniprot.org/uniprotkb/Q14397" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.37829557", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Human glucokinase regulatory protein (GCKR): cDNA and genomic cloning, complete primary structure, and chromosomal localization.", "journal": "Mamm. Genome", "date": "1995", "authors": "Warner JP, Leek JP, Intody S, Markham AF, Bonthron DT", "reference": { "type": "PubMed", "id": "8589523", "url": "https://pubmed.ncbi.nlm.nih.gov/8589523" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q14397-1", "protein_name": "Glucokinase regulatory protein", "gene_name": "GCKR", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q14397", "url": "https://www.uniprot.org/uniprotkb/Q14397" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8589523", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Organization of the human glucokinase regulator gene GCKR.", "journal": "Genomics", "date": "1998", "authors": "Hayward B E, Dunlop N, Intody S, Leek J P, Markham A F, Warner J P, Bonthron D T", "reference": { "type": "PubMed", "id": "9570959", "url": "https://pubmed.ncbi.nlm.nih.gov/9570959" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q14397-1", "protein_name": "Glucokinase regulatory protein", "gene_name": "GCKR", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q14397", "url": "https://www.uniprot.org/uniprotkb/Q14397" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9570959", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "An orphan G protein-coupled receptor, GPR1, acts as a coreceptor to allow replication of human immunodeficiency virus types 1 and 2 in brain-derived cells.", "journal": "Journal of virology", "date": "1999", "authors": "Shimizu N, Soda Y, Kanbe K, Liu HY, Jinno A, Kitamura T, Hoshino H", "reference": { "type": "PubMed", "id": "10233994", "url": "https://pubmed.ncbi.nlm.nih.gov/10233994" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P46091-1", "protein_name": "Chemerin-like receptor 2", "gene_name": "CMKLR2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P46091", "url": "https://www.uniprot.org/uniprotkb/P46091" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10233994", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Senescence-associated genes in normal human oral keratinocytes.", "journal": "Experimental cell research", "date": "2003", "authors": "Kang MK, Kameta A, Shin KH, Baluda MA, Kim HR, Park NH", "reference": { "type": "PubMed", "id": "12837283", "url": "https://pubmed.ncbi.nlm.nih.gov/12837283" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P46091-1", "protein_name": "Chemerin-like receptor 2", "gene_name": "CMKLR2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P46091", "url": "https://www.uniprot.org/uniprotkb/P46091" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12837283", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The synthetic peptide derived from the NH2-terminal extracellular region of an orphan G protein-coupled receptor, GPR1, preferentially inhibits infection of X4 HIV-1.", "journal": "The Journal of biological chemistry", "date": "2005", "authors": "Jinno-Oue A, Shimizu N, Soda Y, Tanaka A, Ohtsuki T, Kurosaki D, Suzuki Y, Hoshino H", "reference": { "type": "PubMed", "id": "15919664", "url": "https://pubmed.ncbi.nlm.nih.gov/15919664" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P46091-1", "protein_name": "Chemerin-like receptor 2", "gene_name": "CMKLR2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P46091", "url": "https://www.uniprot.org/uniprotkb/P46091" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15919664", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The genetic design of signaling cascades to record receptor activation.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2008-01-08", "authors": "Barnea Gilad, Strapps Walter, Herrada Gilles, Berman Yemiliya, Ong Jane, Kloss Brian, Axel Richard, Lee Kevin J", "reference": { "type": "PubMed", "id": "18165312", "url": "https://pubmed.ncbi.nlm.nih.gov/18165312" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P46091-1", "protein_name": "Chemerin-like receptor 2", "gene_name": "CMKLR2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P46091", "url": "https://www.uniprot.org/uniprotkb/P46091" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.18165312", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Chemerin causes lipid metabolic imbalance and induces passive lipid accumulation in human hepatoma cell line via the receptor GPR1.", "journal": "Life sciences", "date": "2021", "authors": "Zhu L, Huang J, Wang Y, Yang Z, Chen X", "reference": { "type": "PubMed", "id": "33887347", "url": "https://pubmed.ncbi.nlm.nih.gov/33887347" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P46091-1", "protein_name": "Chemerin-like receptor 2", "gene_name": "CMKLR2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P46091", "url": "https://www.uniprot.org/uniprotkb/P46091" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.33887347", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The Atypical Chemerin Receptor GPR1 Displays Different Modes of Interaction with beta-Arrestins in Humans and Mice with Important Consequences on Subcellular Localization and Trafficking.", "journal": "Cells", "date": "2022", "authors": "Degroot GN, Lepage V, Parmentier M, Springael JY", "reference": { "type": "PubMed", "id": "35326488", "url": "https://pubmed.ncbi.nlm.nih.gov/35326488" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P46091-1", "protein_name": "Chemerin-like receptor 2", "gene_name": "CMKLR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8K087-1", "protein_name": "Chemerin-like receptor 2", "gene_name": "Cmklr2", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P46091", "url": "https://www.uniprot.org/uniprotkb/P46091" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.35326488", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular characterisation of the 22q13 deletion syndrome supports the role of haploinsufficiency of SHANK3/PROSAP2 in the major neurological symptoms.", "journal": "Journal of medical genetics", "date": "2003", "authors": "Wilson HL, Wong AC, Shaw SR, Tse WY, Stapleton GA, Phelan MC, Hu S, Marshall J, McDermid HE", "reference": { "type": "PubMed", "id": "12920066", "url": "https://pubmed.ncbi.nlm.nih.gov/12920066" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYB0-1", "protein_name": "SH3 and multiple ankyrin repeat domains protein 3", "gene_name": "SHANK3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BYB0", "url": "https://www.uniprot.org/uniprotkb/Q9BYB0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12920066", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Mutations in the gene encoding the synaptic scaffolding protein SHANK3 are associated with autism spectrum disorders.", "journal": "Nature genetics", "date": "2007", "authors": "Durand CM, Betancur C, Boeckers TM, Bockmann J, Chaste P, Fauchereau F, Nygren G, Rastam M, Gillberg IC, Anckarsater H, Sponheim E, Goubran-Botros H, Delorme R, Chabane N, Mouren-Simeoni MC, de Mas P, Bieth E, Roge B, Heron D, Burglen L, Gillberg C, Leboyer M, Bourgeron T", "reference": { "type": "PubMed", "id": "17173049", "url": "https://pubmed.ncbi.nlm.nih.gov/17173049" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYB0-1", "protein_name": "SH3 and multiple ankyrin repeat domains protein 3", "gene_name": "SHANK3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BYB0", "url": "https://www.uniprot.org/uniprotkb/Q9BYB0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.17173049", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Contribution of SHANK3 mutations to autism spectrum disorder.", "journal": "American journal of human genetics", "date": "2007", "authors": "Moessner R, Marshall CR, Sutcliffe JS, Skaug J, Pinto D, Vincent J, Zwaigenbaum L, Fernandez B, Roberts W, Szatmari P, Scherer SW", "reference": { "type": "PubMed", "id": "17999366", "url": "https://pubmed.ncbi.nlm.nih.gov/17999366" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYB0-1", "protein_name": "SH3 and multiple ankyrin repeat domains protein 3", "gene_name": "SHANK3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BYB0", "url": "https://www.uniprot.org/uniprotkb/Q9BYB0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.17999366", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "De novo mutations in the gene encoding the synaptic scaffolding protein SHANK3 in patients ascertained for schizophrenia.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2010", "authors": "Gauthier J, Champagne N, Lafreniere RG, Xiong L, Spiegelman D, Brustein E, Lapointe M, Peng H, Cote M, Noreau A, Hamdan FF, Addington AM, Rapoport JL, Delisi LE, Krebs MO, Joober R, Fathalli F, Mouaffak F, Haghighi AP, Neri C, Dube MP, Samuels ME, Marineau C, Stone EA, Awadalla P, Barker PA, Carbonetto S, Drapeau P, Rouleau GA", "reference": { "type": "PubMed", "id": "20385823", "url": "https://pubmed.ncbi.nlm.nih.gov/20385823" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYB0-1", "protein_name": "SH3 and multiple ankyrin repeat domains protein 3", "gene_name": "SHANK3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BYB0", "url": "https://www.uniprot.org/uniprotkb/Q9BYB0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.20385823", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Analysis of a purported SHANK3 mutation in a boy with autism: clinical impact of rare variant research in neurodevelopmental disabilities.", "journal": "Brain research", "date": "2011", "authors": "Kolevzon A, Cai G, Soorya L, Takahashi N, Grodberg D, Kajiwara Y, Willner JP, Tryfon A, Buxbaum JD", "reference": { "type": "PubMed", "id": "21062623", "url": "https://pubmed.ncbi.nlm.nih.gov/21062623" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYB0-1", "protein_name": "SH3 and multiple ankyrin repeat domains protein 3", "gene_name": "SHANK3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BYB0", "url": "https://www.uniprot.org/uniprotkb/Q9BYB0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.21062623", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Novel variants of the SHANK3 gene in Japanese autistic patients with severe delayed speech development.", "journal": "Psychiatric genetics", "date": "2011", "authors": "Waga C, Okamoto N, Ondo Y, Fukumura-Kato R, Goto Y, Kohsaka S, Uchino S", "reference": { "type": "PubMed", "id": "21378602", "url": "https://pubmed.ncbi.nlm.nih.gov/21378602" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYB0-1", "protein_name": "SH3 and multiple ankyrin repeat domains protein 3", "gene_name": "SHANK3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BYB0", "url": "https://www.uniprot.org/uniprotkb/Q9BYB0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.21378602", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Bipolar affective disorder and early dementia onset in a male patient with SHANK3 deletion.", "journal": "Eur. J. Med. Genet.", "date": "2012", "authors": "Vucurovic Ksenija, Landais Emilie, Delahaigue C\u00e9cile, Eutrope Julien, Schneider Anouck, Leroy Camille, Kabbaj Hamza, Motte Jacques, Gaillard Dominique, Rolland Anne-Catherine, Doco-Fenzy Martine", "reference": { "type": "PubMed", "id": "22922660", "url": "https://pubmed.ncbi.nlm.nih.gov/22922660" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYB0-1", "protein_name": "SH3 and multiple ankyrin repeat domains protein 3", "gene_name": "SHANK3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BYB0", "url": "https://www.uniprot.org/uniprotkb/Q9BYB0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.22922660", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Prospective investigation of autism and genotype-phenotype correlations in 22q13 deletion syndrome and SHANK3 deficiency.", "journal": "Mol. Autism", "date": "2013", "authors": "Soorya Latha, Kolevzon Alexander, Zweifach Jessica, Lim Teresa, Dobry Yuriy, Schwartz Lily, Frank Yitzchak, Wang A Ting, Cai Guiqing, Parkhomenko Elena, Halpern Danielle, Grodberg David, Angarita Benjamin, Willner Judith P, Yang Amy, Canitano Roberto, Chaplin William, Betancur Catalina, Buxbaum Joseph D", "reference": { "type": "PubMed", "id": "23758760", "url": "https://pubmed.ncbi.nlm.nih.gov/23758760" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYB0-1", "protein_name": "SH3 and multiple ankyrin repeat domains protein 3", "gene_name": "SHANK3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BYB0", "url": "https://www.uniprot.org/uniprotkb/Q9BYB0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.23758760", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "SHANK3 and IGF1 restore synaptic deficits in neurons from 22q13 deletion syndrome patients.", "journal": "Nature", "date": "2013-11-14", "authors": "Shcheglovitov Aleksandr, Shcheglovitova Olesya, Yazawa Masayuki, Portmann Thomas, Shu Rui, Sebastiano Vittorio, Krawisz Anna, Froehlich Wendy, Bernstein Jonathan A, Hallmayer Joachim F, Dolmetsch Ricardo E", "reference": { "type": "PubMed", "id": "24132240", "url": "https://pubmed.ncbi.nlm.nih.gov/24132240" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYB0-1", "protein_name": "SH3 and multiple ankyrin repeat domains protein 3", "gene_name": "SHANK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05019-1", "protein_name": "Insulin-like growth factor 1", "gene_name": "IGF1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BYB0", "url": "https://www.uniprot.org/uniprotkb/Q9BYB0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.24132240", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Epigenetic dysregulation of SHANK3 in brain tissues from individuals with autism spectrum disorders.", "journal": "Hum. Mol. Genet.", "date": "2014", "authors": "Zhu Li, Wang Xiaoming, Li Xin-Lei, Towers Aaron, Cao Xinyu, Wang Ping, Bowman Rachel, Yang Hyuna, Goldstein Jennifer, Li Yi-Ju, Jiang Yong-Hui", "reference": { "type": "PubMed", "id": "24186872", "url": "https://pubmed.ncbi.nlm.nih.gov/24186872" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYB0-1", "protein_name": "SH3 and multiple ankyrin repeat domains protein 3", "gene_name": "SHANK3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BYB0", "url": "https://www.uniprot.org/uniprotkb/Q9BYB0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.24186872", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Transcriptional determinism and stochasticity contribute to the complexity of autism-associated SHANK family genes.", "journal": "Cell reports", "date": "2024-07-23", "authors": "Lu Xiaona, Ni Pengyu, Suarez-Meade Paola, Ma Yu, Forrest Emily Niemitz, Wang Guilin, Wang Yi, Qui\u00f1ones-Hinojosa Alfredo, Gerstein Mark, Jiang Yong-Hui", "reference": { "type": "PubMed", "id": "38900637", "url": "https://pubmed.ncbi.nlm.nih.gov/38900637" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYB0-1", "protein_name": "SH3 and multiple ankyrin repeat domains protein 3", "gene_name": "SHANK3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BYB0", "url": "https://www.uniprot.org/uniprotkb/Q9BYB0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.38900637", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Cardiovascular abnormalities in patients with SHANK3 pathogenic variants: Beyond neurodevelopmental disorders and epilepsy.", "journal": "European journal of medical genetics", "date": "2024-10", "authors": "Esmel-Vilomara Roger, Dougherty-De Miguel Lucy, Artigas-Baleri Al\u00edcia, Tur\u00f3n-Vi\u00f1as Eul\u00e0lia, Cusc\u00f3 Ivon, D\u00edaz-G\u00f3mez Asunci\u00f3n, Panad\u00e9s-De Oliveira Luisa, Rocamora Rodrigo, Boronat Susana", "reference": { "type": "PubMed", "id": "39094681", "url": "https://pubmed.ncbi.nlm.nih.gov/39094681" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYB0-1", "protein_name": "SH3 and multiple ankyrin repeat domains protein 3", "gene_name": "SHANK3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BYB0", "url": "https://www.uniprot.org/uniprotkb/Q9BYB0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.39094681", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Shank3 mutation impairs glutamate signaling and myelination in ASD mouse model and human iPSC-derived OPCs.", "journal": "Science advances", "date": "2024-10-11", "authors": "Fischer Inbar, Shohat Sophie, Leichtmann-Bardoogo Yael, Nayak Ritu, Wiener Gal, Rosh Idan, Shemen Aviram, Tripathi Utkarsh, Rokach May, Bar Ela, Hussein Yara, Castro Ana Carolina, Chen Gal, Soffer Adi, Schokoroy-Trangle Sari, Elad-Sfadia Galit, Assaf Yaniv, Schroeder Avi, Monteiro Patricia, Stern Shani, Maoz Ben M, Barak Boaz", "reference": { "type": "PubMed", "id": "39392881", "url": "https://pubmed.ncbi.nlm.nih.gov/39392881" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYB0-1", "protein_name": "SH3 and multiple ankyrin repeat domains protein 3", "gene_name": "SHANK3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BYB0", "url": "https://www.uniprot.org/uniprotkb/Q9BYB0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.39392881", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Novel GANAB variants associated with polycystic liver disease.", "journal": "Orphanet journal of rare diseases", "date": "2020", "authors": "van de Laarschot LFM, Te Morsche RHM, Hoischen A, Venselaar H, Roelofs HM, Cnossen WR, Banales JM, Roepman R, Drenth JPH", "reference": { "type": "PubMed", "id": "33097077", "url": "https://pubmed.ncbi.nlm.nih.gov/33097077" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q14697-1", "protein_name": "Neutral alpha-glucosidase AB", "gene_name": "GANAB", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q14697", "url": "https://www.uniprot.org/uniprotkb/Q14697" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.33097077", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "PKD3 promotes metastasis and growth of oral squamous cell carcinoma through positive feedback regulation with PD-L1 and activation of ERK-STAT1/3-EMT signalling.", "journal": "International journal of oral science", "date": "2021-03-10", "authors": "Cui Bomiao, Chen Jiao, Luo Min, Liu Yiying, Chen Hongli, L\u00fc Die, Wang Liwei, Kang Yingzhu, Feng Yun, Huang Libin, Zhang Ping", "reference": { "type": "PubMed", "id": "33692335", "url": "https://pubmed.ncbi.nlm.nih.gov/33692335" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q14697-1", "protein_name": "Neutral alpha-glucosidase AB", "gene_name": "GANAB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40763-1", "protein_name": "Signal transducer and activator of transcription 3", "gene_name": "STAT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42224-1", "protein_name": "Signal transducer and activator of transcription 1-alpha/beta", "gene_name": "STAT1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q14697", "url": "https://www.uniprot.org/uniprotkb/Q14697" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 727, "end_pos": 727, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "Phosphoserine; by DYRK2, NLK, NEK6, IRAK1, RPS6KA5, ZIPK/DAPK3 and PKC/PRKCE", "evidence": [ { "database": "UniProtKB", "id": "P40763", "url": "https://www.uniprot.org/uniprotkb/P40763" }, { "database": "iPTMnet", "id": "P40763", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P40763" }, { "database": "PubMed", "id": "10446219", "url": "https://pubmed.ncbi.nlm.nih.gov/10446219" }, { "database": "PubMed", "id": "10521505", "url": "https://pubmed.ncbi.nlm.nih.gov/10521505" }, { "database": "PubMed", "id": "11350938", "url": "https://pubmed.ncbi.nlm.nih.gov/11350938" }, { "database": "PubMed", "id": "12576423", "url": "https://pubmed.ncbi.nlm.nih.gov/12576423" }, { "database": "PubMed", "id": "12763138", "url": "https://pubmed.ncbi.nlm.nih.gov/12763138" }, { "database": "PubMed", "id": "14551213", "url": "https://pubmed.ncbi.nlm.nih.gov/14551213" }, { "database": "PubMed", "id": "18491316", "url": "https://pubmed.ncbi.nlm.nih.gov/18491316" }, { "database": "PubMed", "id": "18669648", "url": "https://pubmed.ncbi.nlm.nih.gov/18669648" }, { "database": "PubMed", "id": "18691976", "url": "https://pubmed.ncbi.nlm.nih.gov/18691976" }, { "database": "PubMed", "id": "19413330", "url": "https://pubmed.ncbi.nlm.nih.gov/19413330" }, { "database": "PubMed", "id": "20058876", "url": "https://pubmed.ncbi.nlm.nih.gov/20058876" }, { "database": "PubMed", "id": "20068231", "url": "https://pubmed.ncbi.nlm.nih.gov/20068231" }, { "database": "PubMed", "id": "9343414", "url": "https://pubmed.ncbi.nlm.nih.gov/9343414" }, { "database": "PubMed", "id": "9872331", "url": "https://pubmed.ncbi.nlm.nih.gov/9872331" }, { "database": "PubMed", "id": "15096606", "url": "https://pubmed.ncbi.nlm.nih.gov/15096606" }, { "database": "PubMed", "id": "17145757", "url": "https://pubmed.ncbi.nlm.nih.gov/17145757" }, { "database": "PubMed", "id": "10336453", "url": "https://pubmed.ncbi.nlm.nih.gov/10336453" }, { "database": "PubMed", "id": "10537060", "url": "https://pubmed.ncbi.nlm.nih.gov/10537060" }, { "database": "PubMed", "id": "10660304", "url": "https://pubmed.ncbi.nlm.nih.gov/10660304" }, { "database": "PubMed", "id": "10727406", "url": "https://pubmed.ncbi.nlm.nih.gov/10727406" }, { "database": "PubMed", "id": "10845908", "url": "https://pubmed.ncbi.nlm.nih.gov/10845908" }, { "database": "PubMed", "id": "10878008", "url": "https://pubmed.ncbi.nlm.nih.gov/10878008" }, { "database": "PubMed", "id": "11071637", "url": "https://pubmed.ncbi.nlm.nih.gov/11071637" }, { "database": "PubMed", "id": "11150545", "url": "https://pubmed.ncbi.nlm.nih.gov/11150545" }, { "database": "PubMed", "id": "11278353", "url": "https://pubmed.ncbi.nlm.nih.gov/11278353" }, { "database": "PubMed", "id": "11322950", "url": "https://pubmed.ncbi.nlm.nih.gov/11322950" }, { "database": "PubMed", "id": "11335711", "url": "https://pubmed.ncbi.nlm.nih.gov/11335711" }, { "database": "PubMed", "id": "11429693", "url": "https://pubmed.ncbi.nlm.nih.gov/11429693" }, { "database": "PubMed", "id": "11470914", "url": "https://pubmed.ncbi.nlm.nih.gov/11470914" }, { "database": "PubMed", "id": "11553624", "url": "https://pubmed.ncbi.nlm.nih.gov/11553624" }, { "database": "PubMed", "id": "11556393", "url": "https://pubmed.ncbi.nlm.nih.gov/11556393" }, { "database": "PubMed", "id": "11922392", "url": "https://pubmed.ncbi.nlm.nih.gov/11922392" }, { "database": "PubMed", "id": "12130710", "url": "https://pubmed.ncbi.nlm.nih.gov/12130710" }, { "database": "PubMed", "id": "12474230", "url": "https://pubmed.ncbi.nlm.nih.gov/12474230" }, { "database": "PubMed", "id": "12494267", "url": "https://pubmed.ncbi.nlm.nih.gov/12494267" }, { "database": "PubMed", "id": "12562765", "url": "https://pubmed.ncbi.nlm.nih.gov/12562765" }, { "database": "PubMed", "id": "12748293", "url": "https://pubmed.ncbi.nlm.nih.gov/12748293" }, { "database": "PubMed", "id": "12796477", "url": "https://pubmed.ncbi.nlm.nih.gov/12796477" }, { "database": "PubMed", "id": "14963038", "url": "https://pubmed.ncbi.nlm.nih.gov/14963038" }, { "database": "PubMed", "id": "14999683", "url": "https://pubmed.ncbi.nlm.nih.gov/14999683" }, { "database": "PubMed", "id": "15115615", "url": "https://pubmed.ncbi.nlm.nih.gov/15115615" }, { "database": "PubMed", "id": "15155836", "url": "https://pubmed.ncbi.nlm.nih.gov/15155836" }, { "database": "PubMed", "id": "15465816", "url": "https://pubmed.ncbi.nlm.nih.gov/15465816" }, { "database": "PubMed", "id": "15467762", "url": "https://pubmed.ncbi.nlm.nih.gov/15467762" }, { "database": "PubMed", "id": "15522880", "url": "https://pubmed.ncbi.nlm.nih.gov/15522880" }, { "database": "PubMed", "id": "15527783", "url": "https://pubmed.ncbi.nlm.nih.gov/15527783" }, { "database": "PubMed", "id": "15764709", "url": "https://pubmed.ncbi.nlm.nih.gov/15764709" }, { "database": "PubMed", "id": "15864742", "url": "https://pubmed.ncbi.nlm.nih.gov/15864742" }, { "database": "PubMed", "id": "15994929", "url": "https://pubmed.ncbi.nlm.nih.gov/15994929" }, { "database": "PubMed", "id": "16048438", "url": "https://pubmed.ncbi.nlm.nih.gov/16048438" }, { "database": "PubMed", "id": "16219639", "url": "https://pubmed.ncbi.nlm.nih.gov/16219639" }, { "database": "PubMed", "id": "16247467", "url": "https://pubmed.ncbi.nlm.nih.gov/16247467" }, { "database": "PubMed", "id": "16288304", "url": "https://pubmed.ncbi.nlm.nih.gov/16288304" }, { "database": "PubMed", "id": "16401721", "url": "https://pubmed.ncbi.nlm.nih.gov/16401721" }, { "database": "PubMed", "id": "16418226", "url": "https://pubmed.ncbi.nlm.nih.gov/16418226" }, { "database": "PubMed", "id": "16425286", "url": "https://pubmed.ncbi.nlm.nih.gov/16425286" }, { "database": "PubMed", "id": "16651438", "url": "https://pubmed.ncbi.nlm.nih.gov/16651438" }, { "database": "PubMed", "id": "16669628", "url": "https://pubmed.ncbi.nlm.nih.gov/16669628" }, { "database": "PubMed", "id": "16720575", "url": "https://pubmed.ncbi.nlm.nih.gov/16720575" }, { "database": "PubMed", "id": "16801397", "url": "https://pubmed.ncbi.nlm.nih.gov/16801397" }, { "database": "PubMed", "id": "16846476", "url": "https://pubmed.ncbi.nlm.nih.gov/16846476" }, { "database": "PubMed", "id": "16879821", "url": "https://pubmed.ncbi.nlm.nih.gov/16879821" }, { "database": "PubMed", "id": "16951338", "url": "https://pubmed.ncbi.nlm.nih.gov/16951338" }, { "database": "PubMed", "id": "17027757", "url": "https://pubmed.ncbi.nlm.nih.gov/17027757" }, { "database": "PubMed", "id": "17237271", "url": "https://pubmed.ncbi.nlm.nih.gov/17237271" }, { "database": "PubMed", "id": "17258468", "url": "https://pubmed.ncbi.nlm.nih.gov/17258468" }, { "database": "PubMed", "id": "17311011", "url": "https://pubmed.ncbi.nlm.nih.gov/17311011" }, { "database": "PubMed", "id": "17341659", "url": "https://pubmed.ncbi.nlm.nih.gov/17341659" }, { "database": "PubMed", "id": "17543278", "url": "https://pubmed.ncbi.nlm.nih.gov/17543278" }, { "database": "PubMed", "id": "17563747", "url": "https://pubmed.ncbi.nlm.nih.gov/17563747" }, { "database": "PubMed", "id": "17575268", "url": "https://pubmed.ncbi.nlm.nih.gov/17575268" }, { "database": "PubMed", "id": "17703129", "url": "https://pubmed.ncbi.nlm.nih.gov/17703129" }, { "database": "PubMed", "id": "17931419", "url": "https://pubmed.ncbi.nlm.nih.gov/17931419" }, { "database": "PubMed", "id": "17993646", "url": "https://pubmed.ncbi.nlm.nih.gov/17993646" }, { "database": "PubMed", "id": "18037959", "url": "https://pubmed.ncbi.nlm.nih.gov/18037959" }, { "database": "PubMed", "id": "18196976", "url": "https://pubmed.ncbi.nlm.nih.gov/18196976" }, { "database": "PubMed", "id": "18198175", "url": "https://pubmed.ncbi.nlm.nih.gov/18198175" }, { "database": "PubMed", "id": "18204781", "url": "https://pubmed.ncbi.nlm.nih.gov/18204781" }, { "database": "PubMed", "id": "18365011", "url": "https://pubmed.ncbi.nlm.nih.gov/18365011" }, { "database": "PubMed", "id": "18448488", "url": "https://pubmed.ncbi.nlm.nih.gov/18448488" }, { "database": "PubMed", "id": "18463684", "url": "https://pubmed.ncbi.nlm.nih.gov/18463684" }, { "database": "PubMed", "id": "18499896", "url": "https://pubmed.ncbi.nlm.nih.gov/18499896" }, { "database": "PubMed", "id": "18519681", "url": "https://pubmed.ncbi.nlm.nih.gov/18519681" }, { "database": "PubMed", "id": "18525315", "url": "https://pubmed.ncbi.nlm.nih.gov/18525315" }, { "database": "PubMed", "id": "18550668", "url": "https://pubmed.ncbi.nlm.nih.gov/18550668" }, { "database": "PubMed", "id": "18668152", "url": "https://pubmed.ncbi.nlm.nih.gov/18668152" }, { "database": "PubMed", "id": "18755267", "url": "https://pubmed.ncbi.nlm.nih.gov/18755267" }, { "database": "PubMed", "id": "18829527", "url": "https://pubmed.ncbi.nlm.nih.gov/18829527" }, { "database": "PubMed", "id": "18939993", "url": "https://pubmed.ncbi.nlm.nih.gov/18939993" }, { "database": "PubMed", "id": "18995957", "url": "https://pubmed.ncbi.nlm.nih.gov/18995957" }, { "database": "PubMed", "id": "19121623", "url": "https://pubmed.ncbi.nlm.nih.gov/19121623" }, { "database": "PubMed", "id": "19182994", "url": "https://pubmed.ncbi.nlm.nih.gov/19182994" }, { "database": "PubMed", "id": "19427337", "url": "https://pubmed.ncbi.nlm.nih.gov/19427337" }, { "database": "PubMed", "id": "19429262", "url": "https://pubmed.ncbi.nlm.nih.gov/19429262" }, { "database": "PubMed", "id": "19440292", "url": "https://pubmed.ncbi.nlm.nih.gov/19440292" }, { "database": "PubMed", "id": "19723038", "url": "https://pubmed.ncbi.nlm.nih.gov/19723038" }, { "database": "PubMed", "id": "19764570", "url": "https://pubmed.ncbi.nlm.nih.gov/19764570" }, { "database": "PubMed", "id": "19875458", "url": "https://pubmed.ncbi.nlm.nih.gov/19875458" }, { "database": "PubMed", "id": "19885032", "url": "https://pubmed.ncbi.nlm.nih.gov/19885032" }, { "database": "PubMed", "id": "19901082", "url": "https://pubmed.ncbi.nlm.nih.gov/19901082" }, { "database": "PubMed", "id": "20154216", "url": "https://pubmed.ncbi.nlm.nih.gov/20154216" }, { "database": "PubMed", "id": "20156552", "url": "https://pubmed.ncbi.nlm.nih.gov/20156552" }, { "database": "PubMed", "id": "20228845", "url": "https://pubmed.ncbi.nlm.nih.gov/20228845" }, { "database": "PubMed", "id": "20473906", "url": "https://pubmed.ncbi.nlm.nih.gov/20473906" }, { "database": "PubMed", "id": "20516069", "url": "https://pubmed.ncbi.nlm.nih.gov/20516069" }, { "database": "PubMed", "id": "20686606", "url": "https://pubmed.ncbi.nlm.nih.gov/20686606" }, { "database": "PubMed", "id": "20712901", "url": "https://pubmed.ncbi.nlm.nih.gov/20712901" }, { "database": "PubMed", "id": "20877211", "url": "https://pubmed.ncbi.nlm.nih.gov/20877211" }, { "database": "PubMed", "id": "20977777", "url": "https://pubmed.ncbi.nlm.nih.gov/20977777" }, { "database": "PubMed", "id": "20979115", "url": "https://pubmed.ncbi.nlm.nih.gov/20979115" }, { "database": "PubMed", "id": "21159613", "url": "https://pubmed.ncbi.nlm.nih.gov/21159613" }, { "database": "PubMed", "id": "21253577", "url": "https://pubmed.ncbi.nlm.nih.gov/21253577" }, { "database": "PubMed", "id": "21398617", "url": "https://pubmed.ncbi.nlm.nih.gov/21398617" }, { "database": "PubMed", "id": "21490133", "url": "https://pubmed.ncbi.nlm.nih.gov/21490133" }, { "database": "PubMed", "id": "21538419", "url": "https://pubmed.ncbi.nlm.nih.gov/21538419" }, { "database": "PubMed", "id": "21619877", "url": "https://pubmed.ncbi.nlm.nih.gov/21619877" }, { "database": "PubMed", "id": "21625597", "url": "https://pubmed.ncbi.nlm.nih.gov/21625597" }, { "database": "PubMed", "id": "21677772", "url": "https://pubmed.ncbi.nlm.nih.gov/21677772" }, { "database": "PubMed", "id": "21702955", "url": "https://pubmed.ncbi.nlm.nih.gov/21702955" }, { "database": "PubMed", "id": "21783819", "url": "https://pubmed.ncbi.nlm.nih.gov/21783819" }, { "database": "PubMed", "id": "21801384", "url": "https://pubmed.ncbi.nlm.nih.gov/21801384" }, { "database": "PubMed", "id": "21878628", "url": "https://pubmed.ncbi.nlm.nih.gov/21878628" }, { "database": "PubMed", "id": "21906308", "url": "https://pubmed.ncbi.nlm.nih.gov/21906308" }, { "database": "PubMed", "id": "21915376", "url": "https://pubmed.ncbi.nlm.nih.gov/21915376" }, { "database": "PubMed", "id": "21954831", "url": "https://pubmed.ncbi.nlm.nih.gov/21954831" }, { "database": "PubMed", "id": "22110204", "url": "https://pubmed.ncbi.nlm.nih.gov/22110204" }, { "database": "PubMed", "id": "22142222", "url": "https://pubmed.ncbi.nlm.nih.gov/22142222" }, { "database": "PubMed", "id": "22174695", "url": "https://pubmed.ncbi.nlm.nih.gov/22174695" }, { "database": "PubMed", "id": "22179221", "url": "https://pubmed.ncbi.nlm.nih.gov/22179221" }, { "database": "PubMed", "id": "22279540", "url": "https://pubmed.ncbi.nlm.nih.gov/22279540" }, { "database": "PubMed", "id": "22280969", "url": "https://pubmed.ncbi.nlm.nih.gov/22280969" }, { "database": "PubMed", "id": "22349830", "url": "https://pubmed.ncbi.nlm.nih.gov/22349830" }, { "database": "PubMed", "id": "22393233", "url": "https://pubmed.ncbi.nlm.nih.gov/22393233" }, { "database": "PubMed", "id": "22418867", "url": "https://pubmed.ncbi.nlm.nih.gov/22418867" }, { "database": "PubMed", "id": "22581330", "url": "https://pubmed.ncbi.nlm.nih.gov/22581330" }, { "database": "PubMed", "id": "22689141", "url": "https://pubmed.ncbi.nlm.nih.gov/22689141" }, { "database": "PubMed", "id": "22696236", "url": "https://pubmed.ncbi.nlm.nih.gov/22696236" }, { "database": "PubMed", "id": "22791907", "url": "https://pubmed.ncbi.nlm.nih.gov/22791907" }, { "database": "PubMed", "id": "22870139", "url": "https://pubmed.ncbi.nlm.nih.gov/22870139" }, { "database": "PubMed", "id": "22905257", "url": "https://pubmed.ncbi.nlm.nih.gov/22905257" }, { "database": "PubMed", "id": "22920439", "url": "https://pubmed.ncbi.nlm.nih.gov/22920439" }, { "database": "PubMed", "id": "22922995", "url": "https://pubmed.ncbi.nlm.nih.gov/22922995" }, { "database": "PubMed", "id": "22937084", "url": "https://pubmed.ncbi.nlm.nih.gov/22937084" }, { "database": "PubMed", "id": "23125416", "url": "https://pubmed.ncbi.nlm.nih.gov/23125416" }, { "database": "PubMed", "id": "23226414", "url": "https://pubmed.ncbi.nlm.nih.gov/23226414" }, { "database": "PubMed", "id": "23329648", "url": "https://pubmed.ncbi.nlm.nih.gov/23329648" }, { "database": "PubMed", "id": "23329839", "url": "https://pubmed.ncbi.nlm.nih.gov/23329839" }, { "database": "PubMed", "id": "23352233", "url": "https://pubmed.ncbi.nlm.nih.gov/23352233" }, { "database": "PubMed", "id": "23379788", "url": "https://pubmed.ncbi.nlm.nih.gov/23379788" }, { "database": "PubMed", "id": "23455323", "url": "https://pubmed.ncbi.nlm.nih.gov/23455323" }, { "database": "PubMed", "id": "23614738", "url": "https://pubmed.ncbi.nlm.nih.gov/23614738" }, { "database": "PubMed", "id": "23690956", "url": "https://pubmed.ncbi.nlm.nih.gov/23690956" }, { "database": "PubMed", "id": "23704922", "url": "https://pubmed.ncbi.nlm.nih.gov/23704922" }, { "database": "PubMed", "id": "23740979", "url": "https://pubmed.ncbi.nlm.nih.gov/23740979" }, { "database": "PubMed", "id": "23782265", "url": "https://pubmed.ncbi.nlm.nih.gov/23782265" }, { "database": "PubMed", "id": "23831387", "url": "https://pubmed.ncbi.nlm.nih.gov/23831387" }, { "database": "PubMed", "id": "23928694", "url": "https://pubmed.ncbi.nlm.nih.gov/23928694" }, { "database": "PubMed", "id": "23947369", "url": "https://pubmed.ncbi.nlm.nih.gov/23947369" }, { "database": "PubMed", "id": "24058772", "url": "https://pubmed.ncbi.nlm.nih.gov/24058772" }, { "database": "PubMed", "id": "24069562", "url": "https://pubmed.ncbi.nlm.nih.gov/24069562" }, { "database": "PubMed", "id": "24086494", "url": "https://pubmed.ncbi.nlm.nih.gov/24086494" }, { "database": "PubMed", "id": "24086526", "url": "https://pubmed.ncbi.nlm.nih.gov/24086526" }, { "database": "PubMed", "id": "24090995", "url": "https://pubmed.ncbi.nlm.nih.gov/24090995" }, { "database": "PubMed", "id": "24283803", "url": "https://pubmed.ncbi.nlm.nih.gov/24283803" }, { "database": "PubMed", "id": "24288470", "url": "https://pubmed.ncbi.nlm.nih.gov/24288470" }, { "database": "PubMed", "id": "24312439", "url": "https://pubmed.ncbi.nlm.nih.gov/24312439" }, { "database": "PubMed", "id": "24423131", "url": "https://pubmed.ncbi.nlm.nih.gov/24423131" }, { "database": "PubMed", "id": "24469975", "url": "https://pubmed.ncbi.nlm.nih.gov/24469975" }, { "database": "PubMed", "id": "24487064", "url": "https://pubmed.ncbi.nlm.nih.gov/24487064" }, { "database": "PubMed", "id": "24496235", "url": "https://pubmed.ncbi.nlm.nih.gov/24496235" }, { "database": "PubMed", "id": "24499623", "url": "https://pubmed.ncbi.nlm.nih.gov/24499623" }, { "database": "PubMed", "id": "24533098", "url": "https://pubmed.ncbi.nlm.nih.gov/24533098" }, { "database": "PubMed", "id": "24667661", "url": "https://pubmed.ncbi.nlm.nih.gov/24667661" }, { "database": "PubMed", "id": "24671708", "url": "https://pubmed.ncbi.nlm.nih.gov/24671708" }, { "database": "PubMed", "id": "24703937", "url": "https://pubmed.ncbi.nlm.nih.gov/24703937" }, { "database": "PubMed", "id": "24726840", "url": "https://pubmed.ncbi.nlm.nih.gov/24726840" }, { "database": "PubMed", "id": "24728078", "url": "https://pubmed.ncbi.nlm.nih.gov/24728078" }, { "database": "PubMed", "id": "24799285", "url": "https://pubmed.ncbi.nlm.nih.gov/24799285" }, { "database": "PubMed", "id": "24886617", "url": "https://pubmed.ncbi.nlm.nih.gov/24886617" }, { "database": "PubMed", "id": "24931163", "url": "https://pubmed.ncbi.nlm.nih.gov/24931163" }, { "database": "PubMed", "id": "24954857", "url": "https://pubmed.ncbi.nlm.nih.gov/24954857" }, { "database": "PubMed", "id": "25013907", "url": "https://pubmed.ncbi.nlm.nih.gov/25013907" }, { "database": "PubMed", "id": "25031733", "url": "https://pubmed.ncbi.nlm.nih.gov/25031733" }, { "database": "PubMed", "id": "25047660", "url": "https://pubmed.ncbi.nlm.nih.gov/25047660" }, { "database": "PubMed", "id": "25089666", "url": "https://pubmed.ncbi.nlm.nih.gov/25089666" }, { "database": "PubMed", "id": "25116684", "url": "https://pubmed.ncbi.nlm.nih.gov/25116684" }, { "database": "PubMed", "id": "25153725", "url": "https://pubmed.ncbi.nlm.nih.gov/25153725" }, { "database": "PubMed", "id": "25226283", "url": "https://pubmed.ncbi.nlm.nih.gov/25226283" }, { "database": "PubMed", "id": "25252914", "url": "https://pubmed.ncbi.nlm.nih.gov/25252914" }, { "database": "PubMed", "id": "25280942", "url": "https://pubmed.ncbi.nlm.nih.gov/25280942" }, { "database": "PubMed", "id": "25299776", "url": "https://pubmed.ncbi.nlm.nih.gov/25299776" }, { "database": "PubMed", "id": "25360179", "url": "https://pubmed.ncbi.nlm.nih.gov/25360179" }, { "database": "PubMed", "id": "25375189", "url": "https://pubmed.ncbi.nlm.nih.gov/25375189" }, { "database": "PubMed", "id": "25383546", "url": "https://pubmed.ncbi.nlm.nih.gov/25383546" }, { "database": "PubMed", "id": "25393367", "url": "https://pubmed.ncbi.nlm.nih.gov/25393367" }, { "database": "PubMed", "id": "25452693", "url": "https://pubmed.ncbi.nlm.nih.gov/25452693" }, { "database": "PubMed", "id": "25512602", "url": "https://pubmed.ncbi.nlm.nih.gov/25512602" }, { "database": "PubMed", "id": "25544757", "url": "https://pubmed.ncbi.nlm.nih.gov/25544757" }, { "database": "PubMed", "id": "25584415", "url": "https://pubmed.ncbi.nlm.nih.gov/25584415" }, { "database": "PubMed", "id": "25605239", "url": "https://pubmed.ncbi.nlm.nih.gov/25605239" }, { "database": "PubMed", "id": "25642823", "url": "https://pubmed.ncbi.nlm.nih.gov/25642823" }, { "database": "PubMed", "id": "25736961", "url": "https://pubmed.ncbi.nlm.nih.gov/25736961" }, { "database": "PubMed", "id": "25740948", "url": "https://pubmed.ncbi.nlm.nih.gov/25740948" }, { "database": "PubMed", "id": "25744297", "url": "https://pubmed.ncbi.nlm.nih.gov/25744297" }, { "database": "PubMed", "id": "25762897", "url": "https://pubmed.ncbi.nlm.nih.gov/25762897" }, { "database": "PubMed", "id": "25789853", "url": "https://pubmed.ncbi.nlm.nih.gov/25789853" }, { "database": "PubMed", "id": "25854938", "url": "https://pubmed.ncbi.nlm.nih.gov/25854938" }, { "database": "PubMed", "id": "25968054", "url": "https://pubmed.ncbi.nlm.nih.gov/25968054" }, { "database": "PubMed", "id": "26028030", "url": "https://pubmed.ncbi.nlm.nih.gov/26028030" }, { "database": "PubMed", "id": "26042668", "url": "https://pubmed.ncbi.nlm.nih.gov/26042668" }, { "database": "PubMed", "id": "26045618", "url": "https://pubmed.ncbi.nlm.nih.gov/26045618" }, { "database": "PubMed", "id": "26055806", "url": "https://pubmed.ncbi.nlm.nih.gov/26055806" }, { "database": "PubMed", "id": "26175331", "url": "https://pubmed.ncbi.nlm.nih.gov/26175331" }, { "database": "PubMed", "id": "26359029", "url": "https://pubmed.ncbi.nlm.nih.gov/26359029" }, { "database": "PubMed", "id": "26376676", "url": "https://pubmed.ncbi.nlm.nih.gov/26376676" }, { "database": "PubMed", "id": "26430964", "url": "https://pubmed.ncbi.nlm.nih.gov/26430964" }, { "database": "PubMed", "id": "26485029", "url": "https://pubmed.ncbi.nlm.nih.gov/26485029" }, { "database": "PubMed", "id": "26575169", "url": "https://pubmed.ncbi.nlm.nih.gov/26575169" }, { "database": "PubMed", "id": "26593962", "url": "https://pubmed.ncbi.nlm.nih.gov/26593962" }, { "database": "PubMed", "id": "26636769", "url": "https://pubmed.ncbi.nlm.nih.gov/26636769" }, { "database": "PubMed", "id": "26657118", "url": "https://pubmed.ncbi.nlm.nih.gov/26657118" }, { "database": "PubMed", "id": "26664907", "url": "https://pubmed.ncbi.nlm.nih.gov/26664907" }, { "database": "PubMed", "id": "26791143", "url": "https://pubmed.ncbi.nlm.nih.gov/26791143" }, { "database": "PubMed", "id": "26792726", "url": "https://pubmed.ncbi.nlm.nih.gov/26792726" }, { "database": "PubMed", "id": "26799670", "url": "https://pubmed.ncbi.nlm.nih.gov/26799670" }, { "database": "PubMed", "id": "26843613", "url": "https://pubmed.ncbi.nlm.nih.gov/26843613" }, { "database": "PubMed", "id": "26898989", "url": "https://pubmed.ncbi.nlm.nih.gov/26898989" }, { "database": "PubMed", "id": "26904961", "url": "https://pubmed.ncbi.nlm.nih.gov/26904961" }, { "database": "PubMed", "id": "26911335", "url": "https://pubmed.ncbi.nlm.nih.gov/26911335" }, { "database": "PubMed", "id": "26918609", "url": "https://pubmed.ncbi.nlm.nih.gov/26918609" }, { "database": "PubMed", "id": "26921179", "url": "https://pubmed.ncbi.nlm.nih.gov/26921179" }, { "database": "PubMed", "id": "26949510", "url": "https://pubmed.ncbi.nlm.nih.gov/26949510" }, { "database": "PubMed", "id": "26959890", "url": "https://pubmed.ncbi.nlm.nih.gov/26959890" }, { "database": "PubMed", "id": "27050371", "url": "https://pubmed.ncbi.nlm.nih.gov/27050371" }, { "database": "PubMed", "id": "27064016", "url": "https://pubmed.ncbi.nlm.nih.gov/27064016" }, { "database": "PubMed", "id": "27080861", "url": "https://pubmed.ncbi.nlm.nih.gov/27080861" }, { "database": "PubMed", "id": "27127727", "url": "https://pubmed.ncbi.nlm.nih.gov/27127727" }, { "database": "PubMed", "id": "27145367", "url": "https://pubmed.ncbi.nlm.nih.gov/27145367" }, { "database": "PubMed", "id": "27185663", "url": "https://pubmed.ncbi.nlm.nih.gov/27185663" }, { "database": "PubMed", "id": "27242913", "url": "https://pubmed.ncbi.nlm.nih.gov/27242913" }, { "database": "PubMed", "id": "27447722", "url": "https://pubmed.ncbi.nlm.nih.gov/27447722" }, { "database": "PubMed", "id": "27458171", "url": "https://pubmed.ncbi.nlm.nih.gov/27458171" }, { "database": "PubMed", "id": "27502076", "url": "https://pubmed.ncbi.nlm.nih.gov/27502076" }, { "database": "PubMed", "id": "27616044", "url": "https://pubmed.ncbi.nlm.nih.gov/27616044" }, { "database": "PubMed", "id": "27658964", "url": "https://pubmed.ncbi.nlm.nih.gov/27658964" }, { "database": "PubMed", "id": "27660268", "url": "https://pubmed.ncbi.nlm.nih.gov/27660268" }, { "database": "PubMed", "id": "27708408", "url": "https://pubmed.ncbi.nlm.nih.gov/27708408" }, { "database": "PubMed", "id": "27748760", "url": "https://pubmed.ncbi.nlm.nih.gov/27748760" }, { "database": "PubMed", "id": "27806334", "url": "https://pubmed.ncbi.nlm.nih.gov/27806334" }, { "database": "PubMed", "id": "27824155", "url": "https://pubmed.ncbi.nlm.nih.gov/27824155" }, { "database": "PubMed", "id": "27840601", "url": "https://pubmed.ncbi.nlm.nih.gov/27840601" }, { "database": "PubMed", "id": "27918421", "url": "https://pubmed.ncbi.nlm.nih.gov/27918421" }, { "database": "PubMed", "id": "28004755", "url": "https://pubmed.ncbi.nlm.nih.gov/28004755" }, { "database": "PubMed", "id": "28030813", "url": "https://pubmed.ncbi.nlm.nih.gov/28030813" }, { "database": "PubMed", "id": "28035720", "url": "https://pubmed.ncbi.nlm.nih.gov/28035720" }, { "database": "PubMed", "id": "28086195", "url": "https://pubmed.ncbi.nlm.nih.gov/28086195" }, { "database": "PubMed", "id": "28130399", "url": "https://pubmed.ncbi.nlm.nih.gov/28130399" }, { "database": "PubMed", "id": "28134252", "url": "https://pubmed.ncbi.nlm.nih.gov/28134252" }, { "database": "PubMed", "id": "28150703", "url": "https://pubmed.ncbi.nlm.nih.gov/28150703" }, { "database": "PubMed", "id": "28157712", "url": "https://pubmed.ncbi.nlm.nih.gov/28157712" }, { "database": "PubMed", "id": "28160777", "url": "https://pubmed.ncbi.nlm.nih.gov/28160777" }, { "database": "PubMed", "id": "28280036", "url": "https://pubmed.ncbi.nlm.nih.gov/28280036" }, { "database": "PubMed", "id": "28350008", "url": "https://pubmed.ncbi.nlm.nih.gov/28350008" }, { "database": "PubMed", "id": "28350087", "url": "https://pubmed.ncbi.nlm.nih.gov/28350087" }, { "database": "PubMed", "id": "28384648", "url": "https://pubmed.ncbi.nlm.nih.gov/28384648" }, { "database": "PubMed", "id": "28397855", "url": "https://pubmed.ncbi.nlm.nih.gov/28397855" }, { "database": "PubMed", "id": "28415760", "url": "https://pubmed.ncbi.nlm.nih.gov/28415760" }, { "database": "PubMed", "id": "28469272", "url": "https://pubmed.ncbi.nlm.nih.gov/28469272" }, { "database": "PubMed", "id": "28515148", "url": "https://pubmed.ncbi.nlm.nih.gov/28515148" }, { "database": "PubMed", "id": "28542650", "url": "https://pubmed.ncbi.nlm.nih.gov/28542650" }, { "database": "PubMed", "id": "28574510", "url": "https://pubmed.ncbi.nlm.nih.gov/28574510" }, { "database": "PubMed", "id": "28640256", "url": "https://pubmed.ncbi.nlm.nih.gov/28640256" }, { "database": "PubMed", "id": "28670112", "url": "https://pubmed.ncbi.nlm.nih.gov/28670112" }, { "database": "PubMed", "id": "28783167", "url": "https://pubmed.ncbi.nlm.nih.gov/28783167" }, { "database": "PubMed", "id": "28881473", "url": "https://pubmed.ncbi.nlm.nih.gov/28881473" }, { "database": "PubMed", "id": "29050266", "url": "https://pubmed.ncbi.nlm.nih.gov/29050266" }, { "database": "PubMed", "id": "29082496", "url": "https://pubmed.ncbi.nlm.nih.gov/29082496" }, { "database": "PubMed", "id": "29088733", "url": "https://pubmed.ncbi.nlm.nih.gov/29088733" }, { "database": "PubMed", "id": "29158850", "url": "https://pubmed.ncbi.nlm.nih.gov/29158850" }, { "database": "PubMed", "id": "29190960", "url": "https://pubmed.ncbi.nlm.nih.gov/29190960" }, { "database": "PubMed", "id": "29212252", "url": "https://pubmed.ncbi.nlm.nih.gov/29212252" }, { "database": "PubMed", "id": "29263930", "url": "https://pubmed.ncbi.nlm.nih.gov/29263930" }, { "database": "PubMed", "id": "29270528", "url": "https://pubmed.ncbi.nlm.nih.gov/29270528" }, { "database": "PubMed", "id": "29309895", "url": "https://pubmed.ncbi.nlm.nih.gov/29309895" }, { "database": "PubMed", "id": "29330478", "url": "https://pubmed.ncbi.nlm.nih.gov/29330478" }, { "database": "PubMed", "id": "29379494", "url": "https://pubmed.ncbi.nlm.nih.gov/29379494" }, { "database": "PubMed", "id": "29423098", "url": "https://pubmed.ncbi.nlm.nih.gov/29423098" }, { "database": "PubMed", "id": "29449694", "url": "https://pubmed.ncbi.nlm.nih.gov/29449694" }, { "database": "PubMed", "id": "29456240", "url": "https://pubmed.ncbi.nlm.nih.gov/29456240" }, { "database": "PubMed", "id": "29464030", "url": "https://pubmed.ncbi.nlm.nih.gov/29464030" }, { "database": "PubMed", "id": "29488000", "url": "https://pubmed.ncbi.nlm.nih.gov/29488000" }, { "database": "PubMed", "id": "29518129", "url": "https://pubmed.ncbi.nlm.nih.gov/29518129" }, { "database": "PubMed", "id": "29571296", "url": "https://pubmed.ncbi.nlm.nih.gov/29571296" }, { "database": "PubMed", "id": "29595328", "url": "https://pubmed.ncbi.nlm.nih.gov/29595328" }, { "database": "PubMed", "id": "29604049", "url": "https://pubmed.ncbi.nlm.nih.gov/29604049" }, { "database": "PubMed", "id": "29630659", "url": "https://pubmed.ncbi.nlm.nih.gov/29630659" }, { "database": "PubMed", "id": "29636527", "url": "https://pubmed.ncbi.nlm.nih.gov/29636527" }, { "database": "PubMed", "id": "29652915", "url": "https://pubmed.ncbi.nlm.nih.gov/29652915" }, { "database": "PubMed", "id": "29666362", "url": "https://pubmed.ncbi.nlm.nih.gov/29666362" }, { "database": "PubMed", "id": "29683208", "url": "https://pubmed.ncbi.nlm.nih.gov/29683208" }, { "database": "PubMed", "id": "29686295", "url": "https://pubmed.ncbi.nlm.nih.gov/29686295" }, { "database": "PubMed", "id": "29774125", "url": "https://pubmed.ncbi.nlm.nih.gov/29774125" }, { "database": "PubMed", "id": "29805309", "url": "https://pubmed.ncbi.nlm.nih.gov/29805309" }, { "database": "PubMed", "id": "29949238", "url": "https://pubmed.ncbi.nlm.nih.gov/29949238" }, { "database": "PubMed", "id": "29995595", "url": "https://pubmed.ncbi.nlm.nih.gov/29995595" }, { "database": "PubMed", "id": "30036966", "url": "https://pubmed.ncbi.nlm.nih.gov/30036966" }, { "database": "PubMed", "id": "30123428", "url": "https://pubmed.ncbi.nlm.nih.gov/30123428" }, { "database": "PubMed", "id": "30127373", "url": "https://pubmed.ncbi.nlm.nih.gov/30127373" }, { "database": "PubMed", "id": "30234199", "url": "https://pubmed.ncbi.nlm.nih.gov/30234199" }, { "database": "PubMed", "id": "30263097", "url": "https://pubmed.ncbi.nlm.nih.gov/30263097" }, { "database": "PubMed", "id": "30286779", "url": "https://pubmed.ncbi.nlm.nih.gov/30286779" }, { "database": "PubMed", "id": "30302278", "url": "https://pubmed.ncbi.nlm.nih.gov/30302278" }, { "database": "PubMed", "id": "30323145", "url": "https://pubmed.ncbi.nlm.nih.gov/30323145" }, { "database": "PubMed", "id": "30375708", "url": "https://pubmed.ncbi.nlm.nih.gov/30375708" }, { "database": "PubMed", "id": "30410767", "url": "https://pubmed.ncbi.nlm.nih.gov/30410767" }, { "database": "PubMed", "id": "30442941", "url": "https://pubmed.ncbi.nlm.nih.gov/30442941" }, { "database": "PubMed", "id": "30470788", "url": "https://pubmed.ncbi.nlm.nih.gov/30470788" }, { "database": "PubMed", "id": "30610554", "url": "https://pubmed.ncbi.nlm.nih.gov/30610554" }, { "database": "PubMed", "id": "30616203", "url": "https://pubmed.ncbi.nlm.nih.gov/30616203" }, { "database": "PubMed", "id": "30675525", "url": "https://pubmed.ncbi.nlm.nih.gov/30675525" }, { "database": "PubMed", "id": "30687322", "url": "https://pubmed.ncbi.nlm.nih.gov/30687322" }, { "database": "PubMed", "id": "30728072", "url": "https://pubmed.ncbi.nlm.nih.gov/30728072" }, { "database": "PubMed", "id": "30783489", "url": "https://pubmed.ncbi.nlm.nih.gov/30783489" }, { "database": "PubMed", "id": "30846988", "url": "https://pubmed.ncbi.nlm.nih.gov/30846988" }, { "database": "PubMed", "id": "30948493", "url": "https://pubmed.ncbi.nlm.nih.gov/30948493" }, { "database": "PubMed", "id": "31013746", "url": "https://pubmed.ncbi.nlm.nih.gov/31013746" }, { "database": "PubMed", "id": "31025789", "url": "https://pubmed.ncbi.nlm.nih.gov/31025789" }, { "database": "PubMed", "id": "31048139", "url": "https://pubmed.ncbi.nlm.nih.gov/31048139" }, { "database": "PubMed", "id": "31198634", "url": "https://pubmed.ncbi.nlm.nih.gov/31198634" }, { "database": "PubMed", "id": "31205408", "url": "https://pubmed.ncbi.nlm.nih.gov/31205408" }, { "database": "PubMed", "id": "31226168", "url": "https://pubmed.ncbi.nlm.nih.gov/31226168" }, { "database": "PubMed", "id": "31227842", "url": "https://pubmed.ncbi.nlm.nih.gov/31227842" }, { "database": "PubMed", "id": "31284599", "url": "https://pubmed.ncbi.nlm.nih.gov/31284599" }, { "database": "PubMed", "id": "31304451", "url": "https://pubmed.ncbi.nlm.nih.gov/31304451" }, { "database": "PubMed", "id": "31319869", "url": "https://pubmed.ncbi.nlm.nih.gov/31319869" }, { "database": "PubMed", "id": "31337843", "url": "https://pubmed.ncbi.nlm.nih.gov/31337843" }, { "database": "PubMed", "id": "31398350", "url": "https://pubmed.ncbi.nlm.nih.gov/31398350" }, { "database": "PubMed", "id": "31500219", "url": "https://pubmed.ncbi.nlm.nih.gov/31500219" }, { "database": "PubMed", "id": "31530281", "url": "https://pubmed.ncbi.nlm.nih.gov/31530281" }, { "database": "PubMed", "id": "31611552", "url": "https://pubmed.ncbi.nlm.nih.gov/31611552" }, { "database": "PubMed", "id": "31655629", "url": "https://pubmed.ncbi.nlm.nih.gov/31655629" }, { "database": "PubMed", "id": "31681292", "url": "https://pubmed.ncbi.nlm.nih.gov/31681292" }, { "database": "PubMed", "id": "31760402", "url": "https://pubmed.ncbi.nlm.nih.gov/31760402" }, { "database": "PubMed", "id": "31780735", "url": "https://pubmed.ncbi.nlm.nih.gov/31780735" }, { "database": "PubMed", "id": "31817171", "url": "https://pubmed.ncbi.nlm.nih.gov/31817171" }, { "database": "PubMed", "id": "31817563", "url": "https://pubmed.ncbi.nlm.nih.gov/31817563" }, { "database": "PubMed", "id": "31878046", "url": "https://pubmed.ncbi.nlm.nih.gov/31878046" }, { "database": "PubMed", "id": "31956373", "url": "https://pubmed.ncbi.nlm.nih.gov/31956373" }, { "database": "PubMed", "id": "31980595", "url": "https://pubmed.ncbi.nlm.nih.gov/31980595" }, { "database": "PubMed", "id": "32005799", "url": "https://pubmed.ncbi.nlm.nih.gov/32005799" }, { "database": "PubMed", "id": "32060308", "url": "https://pubmed.ncbi.nlm.nih.gov/32060308" }, { "database": "PubMed", "id": "32171124", "url": "https://pubmed.ncbi.nlm.nih.gov/32171124" }, { "database": "PubMed", "id": "32231398", "url": "https://pubmed.ncbi.nlm.nih.gov/32231398" }, { "database": "PubMed", "id": "32304779", "url": "https://pubmed.ncbi.nlm.nih.gov/32304779" }, { "database": "PubMed", "id": "32319563", "url": "https://pubmed.ncbi.nlm.nih.gov/32319563" }, { "database": "PubMed", "id": "32377705", "url": "https://pubmed.ncbi.nlm.nih.gov/32377705" }, { "database": "PubMed", "id": "32390009", "url": "https://pubmed.ncbi.nlm.nih.gov/32390009" }, { "database": "PubMed", "id": "32491253", "url": "https://pubmed.ncbi.nlm.nih.gov/32491253" }, { "database": "PubMed", "id": "32565533", "url": "https://pubmed.ncbi.nlm.nih.gov/32565533" }, { "database": "PubMed", "id": "32636937", "url": "https://pubmed.ncbi.nlm.nih.gov/32636937" }, { "database": "PubMed", "id": "32716315", "url": "https://pubmed.ncbi.nlm.nih.gov/32716315" }, { "database": "PubMed", "id": "32735617", "url": "https://pubmed.ncbi.nlm.nih.gov/32735617" }, { "database": "PubMed", "id": "32767999", "url": "https://pubmed.ncbi.nlm.nih.gov/32767999" }, { "database": "PubMed", "id": "32774719", "url": "https://pubmed.ncbi.nlm.nih.gov/32774719" }, { "database": "PubMed", "id": "32792856", "url": "https://pubmed.ncbi.nlm.nih.gov/32792856" }, { "database": "PubMed", "id": "32807795", "url": "https://pubmed.ncbi.nlm.nih.gov/32807795" }, { "database": "PubMed", "id": "32972460", "url": "https://pubmed.ncbi.nlm.nih.gov/32972460" }, { "database": "PubMed", "id": "32973302", "url": "https://pubmed.ncbi.nlm.nih.gov/32973302" }, { "database": "PubMed", "id": "33002501", "url": "https://pubmed.ncbi.nlm.nih.gov/33002501" }, { "database": "PubMed", "id": "33040485", "url": "https://pubmed.ncbi.nlm.nih.gov/33040485" }, { "database": "PubMed", "id": "33061855", "url": "https://pubmed.ncbi.nlm.nih.gov/33061855" }, { "database": "PubMed", "id": "33066004", "url": "https://pubmed.ncbi.nlm.nih.gov/33066004" }, { "database": "PubMed", "id": "33098871", "url": "https://pubmed.ncbi.nlm.nih.gov/33098871" }, { "database": "PubMed", "id": "33217668", "url": "https://pubmed.ncbi.nlm.nih.gov/33217668" }, { "database": "PubMed", "id": "33262462", "url": "https://pubmed.ncbi.nlm.nih.gov/33262462" }, { "database": "PubMed", "id": "33279931", "url": "https://pubmed.ncbi.nlm.nih.gov/33279931" }, { "database": "PubMed", "id": "33357429", "url": "https://pubmed.ncbi.nlm.nih.gov/33357429" }, { "database": "PubMed", "id": "33429003", "url": "https://pubmed.ncbi.nlm.nih.gov/33429003" }, { "database": "PubMed", "id": "33446662", "url": "https://pubmed.ncbi.nlm.nih.gov/33446662" }, { "database": "PubMed", "id": "33529218", "url": "https://pubmed.ncbi.nlm.nih.gov/33529218" }, { "database": "PubMed", "id": "33640759", "url": "https://pubmed.ncbi.nlm.nih.gov/33640759" }, { "database": "PubMed", "id": "33660414", "url": "https://pubmed.ncbi.nlm.nih.gov/33660414" }, { "database": "PubMed", "id": "33692335", "url": "https://pubmed.ncbi.nlm.nih.gov/33692335" }, { "database": "PubMed", "id": "33772065", "url": "https://pubmed.ncbi.nlm.nih.gov/33772065" }, { "database": "PubMed", "id": "33782423", "url": "https://pubmed.ncbi.nlm.nih.gov/33782423" }, { "database": "PubMed", "id": "33791043", "url": "https://pubmed.ncbi.nlm.nih.gov/33791043" }, { "database": "PubMed", "id": "33818016", "url": "https://pubmed.ncbi.nlm.nih.gov/33818016" }, { "database": "PubMed", "id": "33968084", "url": "https://pubmed.ncbi.nlm.nih.gov/33968084" }, { "database": "PubMed", "id": "34440160", "url": "https://pubmed.ncbi.nlm.nih.gov/34440160" }, { "database": "PubMed", "id": "34543857", "url": "https://pubmed.ncbi.nlm.nih.gov/34543857" }, { "database": "PubMed", "id": "34908808", "url": "https://pubmed.ncbi.nlm.nih.gov/34908808" }, { "database": "PubMed", "id": "35031324", "url": "https://pubmed.ncbi.nlm.nih.gov/35031324" }, { "database": "PubMed", "id": "35125963", "url": "https://pubmed.ncbi.nlm.nih.gov/35125963" }, { "database": "PubMed", "id": "35566660", "url": "https://pubmed.ncbi.nlm.nih.gov/35566660" }, { "database": "PubMed", "id": "35670018", "url": "https://pubmed.ncbi.nlm.nih.gov/35670018" }, { "database": "PubMed", "id": "35928250", "url": "https://pubmed.ncbi.nlm.nih.gov/35928250" }, { "database": "PubMed", "id": "36017196", "url": "https://pubmed.ncbi.nlm.nih.gov/36017196" }, { "database": "PubMed", "id": "36103247", "url": "https://pubmed.ncbi.nlm.nih.gov/36103247" }, { "database": "PubMed", "id": "36282975", "url": "https://pubmed.ncbi.nlm.nih.gov/36282975" }, { "database": "PubMed", "id": "36443287", "url": "https://pubmed.ncbi.nlm.nih.gov/36443287" }, { "database": "PubMed", "id": "9322921", "url": "https://pubmed.ncbi.nlm.nih.gov/9322921" }, { "database": "PubMed", "id": "9399961", "url": "https://pubmed.ncbi.nlm.nih.gov/9399961" }, { "database": "PubMed", "id": "17875724", "url": "https://pubmed.ncbi.nlm.nih.gov/17875724" }, { "database": "PubMed", "id": "18599021", "url": "https://pubmed.ncbi.nlm.nih.gov/18599021" }, { "database": "PubMed", "id": "21135090", "url": "https://pubmed.ncbi.nlm.nih.gov/21135090" }, { "database": "PubMed", "id": "23186163", "url": "https://pubmed.ncbi.nlm.nih.gov/23186163" }, { "database": "PubMed", "id": "24275569", "url": "https://pubmed.ncbi.nlm.nih.gov/24275569" }, { "database": "PubMed", "id": "26293184", "url": "https://pubmed.ncbi.nlm.nih.gov/26293184" }, { "database": "PubMed", "id": "31899195", "url": "https://pubmed.ncbi.nlm.nih.gov/31899195" }, { "database": "PubMed", "id": "32797246", "url": "https://pubmed.ncbi.nlm.nih.gov/32797246" } ], "site_lbl": "Ser727", "uniprot_canonical_ac": "P40763-1" }, { "start_pos": 727, "end_pos": 727, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "Phosphoserine; by CaMK2, CDK8 and MAPK14", "evidence": [ { "database": "UniProtKB", "id": "P42224", "url": "https://www.uniprot.org/uniprotkb/P42224" }, { "database": "iPTMnet", "id": "P42224", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P42224" }, { "database": "PubMed", "id": "11839738", "url": "https://pubmed.ncbi.nlm.nih.gov/11839738" }, { "database": "PubMed", "id": "11972023", "url": "https://pubmed.ncbi.nlm.nih.gov/11972023" }, { "database": "PubMed", "id": "12637327", "url": "https://pubmed.ncbi.nlm.nih.gov/12637327" }, { "database": "PubMed", "id": "14963018", "url": "https://pubmed.ncbi.nlm.nih.gov/14963018" }, { "database": "PubMed", "id": "15322115", "url": "https://pubmed.ncbi.nlm.nih.gov/15322115" }, { "database": "PubMed", "id": "18452278", "url": "https://pubmed.ncbi.nlm.nih.gov/18452278" }, { "database": "PubMed", "id": "18669648", "url": "https://pubmed.ncbi.nlm.nih.gov/18669648" }, { "database": "PubMed", "id": "18691976", "url": "https://pubmed.ncbi.nlm.nih.gov/18691976" }, { "database": "PubMed", "id": "20058876", "url": "https://pubmed.ncbi.nlm.nih.gov/20058876" }, { "database": "PubMed", "id": "20068231", "url": "https://pubmed.ncbi.nlm.nih.gov/20068231" }, { "database": "PubMed", "id": "7543024", "url": "https://pubmed.ncbi.nlm.nih.gov/7543024" }, { "database": "PubMed", "id": "7690989", "url": "https://pubmed.ncbi.nlm.nih.gov/7690989" }, { "database": "PubMed", "id": "9355737", "url": "https://pubmed.ncbi.nlm.nih.gov/9355737" }, { "database": "PubMed", "id": "16799645", "url": "https://pubmed.ncbi.nlm.nih.gov/16799645" }, { "database": "PRO", "id": "P42224", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=P42224" }, { "database": "PubMed", "id": "10329948", "url": "https://pubmed.ncbi.nlm.nih.gov/10329948" }, { "database": "PubMed", "id": "10383940", "url": "https://pubmed.ncbi.nlm.nih.gov/10383940" }, { "database": "PubMed", "id": "10523304", "url": "https://pubmed.ncbi.nlm.nih.gov/10523304" }, { "database": "PubMed", "id": "10542198", "url": "https://pubmed.ncbi.nlm.nih.gov/10542198" }, { "database": "PubMed", "id": "10570180", "url": "https://pubmed.ncbi.nlm.nih.gov/10570180" }, { "database": "PubMed", "id": "10645003", "url": "https://pubmed.ncbi.nlm.nih.gov/10645003" }, { "database": "PubMed", "id": "10748192", "url": "https://pubmed.ncbi.nlm.nih.gov/10748192" }, { "database": "PubMed", "id": "10753717", "url": "https://pubmed.ncbi.nlm.nih.gov/10753717" }, { "database": "PubMed", "id": "10820245", "url": "https://pubmed.ncbi.nlm.nih.gov/10820245" }, { "database": "PubMed", "id": "10878008", "url": "https://pubmed.ncbi.nlm.nih.gov/10878008" }, { "database": "PubMed", "id": "10918594", "url": "https://pubmed.ncbi.nlm.nih.gov/10918594" }, { "database": "PubMed", "id": "10940874", "url": "https://pubmed.ncbi.nlm.nih.gov/10940874" }, { "database": "PubMed", "id": "11309387", "url": "https://pubmed.ncbi.nlm.nih.gov/11309387" }, { "database": "PubMed", "id": "11438544", "url": "https://pubmed.ncbi.nlm.nih.gov/11438544" }, { "database": "PubMed", "id": "11675348", "url": "https://pubmed.ncbi.nlm.nih.gov/11675348" }, { "database": "PubMed", "id": "11777927", "url": "https://pubmed.ncbi.nlm.nih.gov/11777927" }, { "database": "PubMed", "id": "11884587", "url": "https://pubmed.ncbi.nlm.nih.gov/11884587" }, { "database": "PubMed", "id": "12068083", "url": "https://pubmed.ncbi.nlm.nih.gov/12068083" }, { "database": "PubMed", "id": "12232043", "url": "https://pubmed.ncbi.nlm.nih.gov/12232043" }, { "database": "PubMed", "id": "12232802", "url": "https://pubmed.ncbi.nlm.nih.gov/12232802" }, { "database": "PubMed", "id": "12526087", "url": "https://pubmed.ncbi.nlm.nih.gov/12526087" }, { "database": "PubMed", "id": "12748293", "url": "https://pubmed.ncbi.nlm.nih.gov/12748293" }, { "database": "PubMed", "id": "12799548", "url": "https://pubmed.ncbi.nlm.nih.gov/12799548" }, { "database": "PubMed", "id": "12807916", "url": "https://pubmed.ncbi.nlm.nih.gov/12807916" }, { "database": "PubMed", "id": "12811837", "url": "https://pubmed.ncbi.nlm.nih.gov/12811837" }, { "database": "PubMed", "id": "12817007", "url": "https://pubmed.ncbi.nlm.nih.gov/12817007" }, { "database": "PubMed", "id": "12856330", "url": "https://pubmed.ncbi.nlm.nih.gov/12856330" }, { "database": "PubMed", "id": "12883649", "url": "https://pubmed.ncbi.nlm.nih.gov/12883649" }, { "database": "PubMed", "id": "12971583", "url": "https://pubmed.ncbi.nlm.nih.gov/12971583" }, { "database": "PubMed", "id": "14648593", "url": "https://pubmed.ncbi.nlm.nih.gov/14648593" }, { "database": "PubMed", "id": "15182726", "url": "https://pubmed.ncbi.nlm.nih.gov/15182726" }, { "database": "PubMed", "id": "15585657", "url": "https://pubmed.ncbi.nlm.nih.gov/15585657" }, { "database": "PubMed", "id": "15695932", "url": "https://pubmed.ncbi.nlm.nih.gov/15695932" }, { "database": "PubMed", "id": "15728510", "url": "https://pubmed.ncbi.nlm.nih.gov/15728510" }, { "database": "PubMed", "id": "15850832", "url": "https://pubmed.ncbi.nlm.nih.gov/15850832" }, { "database": "PubMed", "id": "15994321", "url": "https://pubmed.ncbi.nlm.nih.gov/15994321" }, { "database": "PubMed", "id": "15994429", "url": "https://pubmed.ncbi.nlm.nih.gov/15994429" }, { "database": "PubMed", "id": "16059651", "url": "https://pubmed.ncbi.nlm.nih.gov/16059651" }, { "database": "PubMed", "id": "16204068", "url": "https://pubmed.ncbi.nlm.nih.gov/16204068" }, { "database": "PubMed", "id": "16257975", "url": "https://pubmed.ncbi.nlm.nih.gov/16257975" }, { "database": "PubMed", "id": "16260419", "url": "https://pubmed.ncbi.nlm.nih.gov/16260419" }, { "database": "PubMed", "id": "16324217", "url": "https://pubmed.ncbi.nlm.nih.gov/16324217" }, { "database": "PubMed", "id": "16343349", "url": "https://pubmed.ncbi.nlm.nih.gov/16343349" }, { "database": "PubMed", "id": "16516295", "url": "https://pubmed.ncbi.nlm.nih.gov/16516295" }, { "database": "PubMed", "id": "16918696", "url": "https://pubmed.ncbi.nlm.nih.gov/16918696" }, { "database": "PubMed", "id": "17075845", "url": "https://pubmed.ncbi.nlm.nih.gov/17075845" }, { "database": "PubMed", "id": "17258468", "url": "https://pubmed.ncbi.nlm.nih.gov/17258468" }, { "database": "PubMed", "id": "17293456", "url": "https://pubmed.ncbi.nlm.nih.gov/17293456" }, { "database": "PubMed", "id": "17371985", "url": "https://pubmed.ncbi.nlm.nih.gov/17371985" }, { "database": "PubMed", "id": "17383622", "url": "https://pubmed.ncbi.nlm.nih.gov/17383622" }, { "database": "PubMed", "id": "17565448", "url": "https://pubmed.ncbi.nlm.nih.gov/17565448" }, { "database": "PubMed", "id": "17785783", "url": "https://pubmed.ncbi.nlm.nih.gov/17785783" }, { "database": "PubMed", "id": "17897103", "url": "https://pubmed.ncbi.nlm.nih.gov/17897103" }, { "database": "PubMed", "id": "17933493", "url": "https://pubmed.ncbi.nlm.nih.gov/17933493" }, { "database": "PubMed", "id": "18190974", "url": "https://pubmed.ncbi.nlm.nih.gov/18190974" }, { "database": "PubMed", "id": "18378670", "url": "https://pubmed.ncbi.nlm.nih.gov/18378670" }, { "database": "PubMed", "id": "18574148", "url": "https://pubmed.ncbi.nlm.nih.gov/18574148" }, { "database": "PubMed", "id": "18817573", "url": "https://pubmed.ncbi.nlm.nih.gov/18817573" }, { "database": "PubMed", "id": "18941537", "url": "https://pubmed.ncbi.nlm.nih.gov/18941537" }, { "database": "PubMed", "id": "19214187", "url": "https://pubmed.ncbi.nlm.nih.gov/19214187" }, { "database": "PubMed", "id": "19349465", "url": "https://pubmed.ncbi.nlm.nih.gov/19349465" }, { "database": "PubMed", "id": "19396596", "url": "https://pubmed.ncbi.nlm.nih.gov/19396596" }, { "database": "PubMed", "id": "19502801", "url": "https://pubmed.ncbi.nlm.nih.gov/19502801" }, { "database": "PubMed", "id": "19551150", "url": "https://pubmed.ncbi.nlm.nih.gov/19551150" }, { "database": "PubMed", "id": "19801665", "url": "https://pubmed.ncbi.nlm.nih.gov/19801665" }, { "database": "PubMed", "id": "19846878", "url": "https://pubmed.ncbi.nlm.nih.gov/19846878" }, { "database": "PubMed", "id": "19915063", "url": "https://pubmed.ncbi.nlm.nih.gov/19915063" }, { "database": "PubMed", "id": "20353823", "url": "https://pubmed.ncbi.nlm.nih.gov/20353823" }, { "database": "PubMed", "id": "20504369", "url": "https://pubmed.ncbi.nlm.nih.gov/20504369" }, { "database": "PubMed", "id": "20675591", "url": "https://pubmed.ncbi.nlm.nih.gov/20675591" }, { "database": "PubMed", "id": "21084836", "url": "https://pubmed.ncbi.nlm.nih.gov/21084836" }, { "database": "PubMed", "id": "21189227", "url": "https://pubmed.ncbi.nlm.nih.gov/21189227" }, { "database": "PubMed", "id": "21303487", "url": "https://pubmed.ncbi.nlm.nih.gov/21303487" }, { "database": "PubMed", "id": "21351482", "url": "https://pubmed.ncbi.nlm.nih.gov/21351482" }, { "database": "PubMed", "id": "21533215", "url": "https://pubmed.ncbi.nlm.nih.gov/21533215" }, { "database": "PubMed", "id": "21783819", "url": "https://pubmed.ncbi.nlm.nih.gov/21783819" }, { "database": "PubMed", "id": "21878628", "url": "https://pubmed.ncbi.nlm.nih.gov/21878628" }, { "database": "PubMed", "id": "21992896", "url": "https://pubmed.ncbi.nlm.nih.gov/21992896" }, { "database": "PubMed", "id": "21999474", "url": "https://pubmed.ncbi.nlm.nih.gov/21999474" }, { "database": "PubMed", "id": "22110204", "url": "https://pubmed.ncbi.nlm.nih.gov/22110204" }, { "database": "PubMed", "id": "22126015", "url": "https://pubmed.ncbi.nlm.nih.gov/22126015" }, { "database": "PubMed", "id": "22435755", "url": "https://pubmed.ncbi.nlm.nih.gov/22435755" }, { "database": "PubMed", "id": "22823229", "url": "https://pubmed.ncbi.nlm.nih.gov/22823229" }, { "database": "PubMed", "id": "22920439", "url": "https://pubmed.ncbi.nlm.nih.gov/22920439" }, { "database": "PubMed", "id": "22996189", "url": "https://pubmed.ncbi.nlm.nih.gov/22996189" }, { "database": "PubMed", "id": "23013371", "url": "https://pubmed.ncbi.nlm.nih.gov/23013371" }, { "database": "PubMed", "id": "23349666", "url": "https://pubmed.ncbi.nlm.nih.gov/23349666" }, { "database": "PubMed", "id": "23352233", "url": "https://pubmed.ncbi.nlm.nih.gov/23352233" }, { "database": "PubMed", "id": "23449448", "url": "https://pubmed.ncbi.nlm.nih.gov/23449448" }, { "database": "PubMed", "id": "23597922", "url": "https://pubmed.ncbi.nlm.nih.gov/23597922" }, { "database": "PubMed", "id": "23637938", "url": "https://pubmed.ncbi.nlm.nih.gov/23637938" }, { "database": "PubMed", "id": "23760261", "url": "https://pubmed.ncbi.nlm.nih.gov/23760261" }, { "database": "PubMed", "id": "23825585", "url": "https://pubmed.ncbi.nlm.nih.gov/23825585" }, { "database": "PubMed", "id": "24449862", "url": "https://pubmed.ncbi.nlm.nih.gov/24449862" }, { "database": "PubMed", "id": "24699362", "url": "https://pubmed.ncbi.nlm.nih.gov/24699362" }, { "database": "PubMed", "id": "24725474", "url": "https://pubmed.ncbi.nlm.nih.gov/24725474" }, { "database": "PubMed", "id": "24788809", "url": "https://pubmed.ncbi.nlm.nih.gov/24788809" }, { "database": "PubMed", "id": "24838635", "url": "https://pubmed.ncbi.nlm.nih.gov/24838635" }, { "database": "PubMed", "id": "24911872", "url": "https://pubmed.ncbi.nlm.nih.gov/24911872" }, { "database": "PubMed", "id": "25226283", "url": "https://pubmed.ncbi.nlm.nih.gov/25226283" }, { "database": "PubMed", "id": "25340519", "url": "https://pubmed.ncbi.nlm.nih.gov/25340519" }, { "database": "PubMed", "id": "25535969", "url": "https://pubmed.ncbi.nlm.nih.gov/25535969" }, { "database": "PubMed", "id": "25686822", "url": "https://pubmed.ncbi.nlm.nih.gov/25686822" }, { "database": "PubMed", "id": "25753288", "url": "https://pubmed.ncbi.nlm.nih.gov/25753288" }, { "database": "PubMed", "id": "25941617", "url": "https://pubmed.ncbi.nlm.nih.gov/25941617" }, { "database": "PubMed", "id": "25950470", "url": "https://pubmed.ncbi.nlm.nih.gov/25950470" }, { "database": "PubMed", "id": "25995822", "url": "https://pubmed.ncbi.nlm.nih.gov/25995822" }, { "database": "PubMed", "id": "26113305", "url": "https://pubmed.ncbi.nlm.nih.gov/26113305" }, { "database": "PubMed", "id": "26141950", "url": "https://pubmed.ncbi.nlm.nih.gov/26141950" }, { "database": "PubMed", "id": "26735690", "url": "https://pubmed.ncbi.nlm.nih.gov/26735690" }, { "database": "PubMed", "id": "26783516", "url": "https://pubmed.ncbi.nlm.nih.gov/26783516" }, { "database": "PubMed", "id": "27074819", "url": "https://pubmed.ncbi.nlm.nih.gov/27074819" }, { "database": "PubMed", "id": "27387064", "url": "https://pubmed.ncbi.nlm.nih.gov/27387064" }, { "database": "PubMed", "id": "27434509", "url": "https://pubmed.ncbi.nlm.nih.gov/27434509" }, { "database": "PubMed", "id": "27791205", "url": "https://pubmed.ncbi.nlm.nih.gov/27791205" }, { "database": "PubMed", "id": "27862183", "url": "https://pubmed.ncbi.nlm.nih.gov/27862183" }, { "database": "PubMed", "id": "28086195", "url": "https://pubmed.ncbi.nlm.nih.gov/28086195" }, { "database": "PubMed", "id": "28262979", "url": "https://pubmed.ncbi.nlm.nih.gov/28262979" }, { "database": "PubMed", "id": "28422713", "url": "https://pubmed.ncbi.nlm.nih.gov/28422713" }, { "database": "PubMed", "id": "28431406", "url": "https://pubmed.ncbi.nlm.nih.gov/28431406" }, { "database": "PubMed", "id": "28471454", "url": "https://pubmed.ncbi.nlm.nih.gov/28471454" }, { "database": "PubMed", "id": "28542650", "url": "https://pubmed.ncbi.nlm.nih.gov/28542650" }, { "database": "PubMed", "id": "28550731", "url": "https://pubmed.ncbi.nlm.nih.gov/28550731" }, { "database": "PubMed", "id": "28560754", "url": "https://pubmed.ncbi.nlm.nih.gov/28560754" }, { "database": "PubMed", "id": "29239838", "url": "https://pubmed.ncbi.nlm.nih.gov/29239838" }, { "database": "PubMed", "id": "29374380", "url": "https://pubmed.ncbi.nlm.nih.gov/29374380" }, { "database": "PubMed", "id": "29751820", "url": "https://pubmed.ncbi.nlm.nih.gov/29751820" }, { "database": "PubMed", "id": "29796172", "url": "https://pubmed.ncbi.nlm.nih.gov/29796172" }, { "database": "PubMed", "id": "29855346", "url": "https://pubmed.ncbi.nlm.nih.gov/29855346" }, { "database": "PubMed", "id": "30007645", "url": "https://pubmed.ncbi.nlm.nih.gov/30007645" }, { "database": "PubMed", "id": "30687322", "url": "https://pubmed.ncbi.nlm.nih.gov/30687322" }, { "database": "PubMed", "id": "30724425", "url": "https://pubmed.ncbi.nlm.nih.gov/30724425" }, { "database": "PubMed", "id": "30886199", "url": "https://pubmed.ncbi.nlm.nih.gov/30886199" }, { "database": "PubMed", "id": "30967527", "url": "https://pubmed.ncbi.nlm.nih.gov/30967527" }, { "database": "PubMed", "id": "31196219", "url": "https://pubmed.ncbi.nlm.nih.gov/31196219" }, { "database": "PubMed", "id": "31408005", "url": "https://pubmed.ncbi.nlm.nih.gov/31408005" }, { "database": "PubMed", "id": "31653890", "url": "https://pubmed.ncbi.nlm.nih.gov/31653890" }, { "database": "PubMed", "id": "32183180", "url": "https://pubmed.ncbi.nlm.nih.gov/32183180" }, { "database": "PubMed", "id": "32319563", "url": "https://pubmed.ncbi.nlm.nih.gov/32319563" }, { "database": "PubMed", "id": "32358509", "url": "https://pubmed.ncbi.nlm.nih.gov/32358509" }, { "database": "PubMed", "id": "32642677", "url": "https://pubmed.ncbi.nlm.nih.gov/32642677" }, { "database": "PubMed", "id": "32731335", "url": "https://pubmed.ncbi.nlm.nih.gov/32731335" }, { "database": "PubMed", "id": "33391546", "url": "https://pubmed.ncbi.nlm.nih.gov/33391546" }, { "database": "PubMed", "id": "33519429", "url": "https://pubmed.ncbi.nlm.nih.gov/33519429" }, { "database": "PubMed", "id": "33692335", "url": "https://pubmed.ncbi.nlm.nih.gov/33692335" }, { "database": "PubMed", "id": "33747209", "url": "https://pubmed.ncbi.nlm.nih.gov/33747209" }, { "database": "PubMed", "id": "33779079", "url": "https://pubmed.ncbi.nlm.nih.gov/33779079" }, { "database": "PubMed", "id": "35712699", "url": "https://pubmed.ncbi.nlm.nih.gov/35712699" }, { "database": "PubMed", "id": "36154299", "url": "https://pubmed.ncbi.nlm.nih.gov/36154299" }, { "database": "PubMed", "id": "36342456", "url": "https://pubmed.ncbi.nlm.nih.gov/36342456" }, { "database": "PubMed", "id": "8523587", "url": "https://pubmed.ncbi.nlm.nih.gov/8523587" }, { "database": "PubMed", "id": "9353323", "url": "https://pubmed.ncbi.nlm.nih.gov/9353323" }, { "database": "PubMed", "id": "9399961", "url": "https://pubmed.ncbi.nlm.nih.gov/9399961" }, { "database": "PubMed", "id": "9649436", "url": "https://pubmed.ncbi.nlm.nih.gov/9649436" }, { "database": "PubMed", "id": "19690332", "url": "https://pubmed.ncbi.nlm.nih.gov/19690332" }, { "database": "PubMed", "id": "21135090", "url": "https://pubmed.ncbi.nlm.nih.gov/21135090" }, { "database": "PubMed", "id": "22065572", "url": "https://pubmed.ncbi.nlm.nih.gov/22065572" }, { "database": "PubMed", "id": "23186163", "url": "https://pubmed.ncbi.nlm.nih.gov/23186163" }, { "database": "PubMed", "id": "26479788", "url": "https://pubmed.ncbi.nlm.nih.gov/26479788" } ], "site_lbl": "Ser727", "uniprot_canonical_ac": "P42224-1" } ], "record_id": "pubmed.33692335", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Protein Kinase D3 Promotes the Reconstruction of OSCC Immune Escape Niche Via Regulating MHC-I and Immune Inhibit Molecules Expression.", "journal": "Journal of immunotherapy (Hagerstown, Md. : 1997)", "date": "2021", "authors": "Lv Die, Chen Jiao, Kang Yingzhu, Luo Min, Chen Hongli, Cui Bomiao, Wang Liwei, Wang Jingnan, Zhou Xuedong, Feng Yun, Huang Libin, Zhang Ping", "reference": { "type": "PubMed", "id": "34545012", "url": "https://pubmed.ncbi.nlm.nih.gov/34545012" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q14697-1", "protein_name": "Neutral alpha-glucosidase AB", "gene_name": "GANAB", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q14697", "url": "https://www.uniprot.org/uniprotkb/Q14697" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.34545012", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Glycoprotein alpha-Subunit of Glucosidase II (GIIalpha) is a novel prognostic biomarker correlated with unfavorable outcome of urothelial carcinoma.", "journal": "BMC cancer", "date": "2022", "authors": "Lin Q, Pei L, Zhao Z, Zhuang X, Qin H", "reference": { "type": "PubMed", "id": "35879690", "url": "https://pubmed.ncbi.nlm.nih.gov/35879690" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q14697-1", "protein_name": "Neutral alpha-glucosidase AB", "gene_name": "GANAB", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q14697", "url": "https://www.uniprot.org/uniprotkb/Q14697" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.35879690", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identity of neutral alpha-glucosidase AB and the glycoprotein processing enzyme glucosidase II. Biochemical and genetic studies.", "journal": "The Journal of biological chemistry", "date": "1985", "authors": "Martiniuk F, Ellenbogen A, Hirschhorn R", "reference": { "type": "PubMed", "id": "3881423", "url": "https://pubmed.ncbi.nlm.nih.gov/3881423" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q14697-1", "protein_name": "Neutral alpha-glucosidase AB", "gene_name": "GANAB", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q14697", "url": "https://www.uniprot.org/uniprotkb/Q14697" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported", "site_category_dict": { "reported": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 97, "start_aa": "Asn", "end_pos": 97, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn97", "evidence": [ { "id": "Q14697", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q14697#ptm_processing" }, { "id": "3881423", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/3881423" } ], "filter_code": "001000000000000000000.00010000000000.00.01001", "uniprot_canonical_ac": "Q14697-1" } ], "record_id": "pubmed.3881423", "abstract": "", "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 1 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_n_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl", "filter_code", "uniprot_canonical_ac" ] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 1 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_n_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl", "filter_code", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Sequence and chromosomal assignment of a novel cDNA identified by immunoscreening of a thyroid expression library: similarity to a family of mitochondrial solute carrier proteins.", "journal": "Mol. Endocrinol.", "date": "1989", "authors": "Zarrilli R, Oates EL, McBride OW, Lerman MI, Chan JY, Santisteban P, Ursini MV, Notkins AL, Kohn LD", "reference": { "type": "PubMed", "id": "2575220", "url": "https://pubmed.ncbi.nlm.nih.gov/2575220" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P16260-1", "protein_name": "Mitochondrial coenzyme A transporter SLC25A16", "gene_name": "SLC25A16", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16261-1", "protein_name": "Mitochondrial coenzyme A transporter SLC25A16", "gene_name": "Slc25a16", "tax_name": "Rat" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P16260", "url": "https://www.uniprot.org/uniprotkb/P16260" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.2575220", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A homozygous missense mutation in SLC25A16 associated with autosomal recessive isolated fingernail dysplasia in a Pakistani family.", "journal": "The British journal of dermatology", "date": "2018", "authors": "Khan S, Ansar M, Khan AK, Shah K, Muhammad N, Shahzad S, Nickerson DA, Bamshad MJ, Santos-Cortez RLP, Leal SM, Ahmad W", "reference": { "type": "PubMed", "id": "28504827", "url": "https://pubmed.ncbi.nlm.nih.gov/28504827" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P16260-1", "protein_name": "Mitochondrial coenzyme A transporter SLC25A16", "gene_name": "SLC25A16", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P16260", "url": "https://www.uniprot.org/uniprotkb/P16260" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.28504827", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Probing coenzyme A homeostasis with semisynthetic biosensors.", "journal": "Nature chemical biology", "date": "2023-03", "authors": "Xue Lin, Schnacke Paul, Frei Michelle S, Koch Birgit, Hiblot Julien, Wombacher Richard, Fabritz Sebastian, Johnsson Kai", "reference": { "type": "PubMed", "id": "36316571", "url": "https://pubmed.ncbi.nlm.nih.gov/36316571" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P16260-1", "protein_name": "Mitochondrial coenzyme A transporter SLC25A16", "gene_name": "SLC25A16", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P16260", "url": "https://www.uniprot.org/uniprotkb/P16260" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.36316571", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Prediction of the coding sequences of unidentified human genes. XXI. The complete sequences of 60 new cDNA clones from brain which code for large proteins.", "journal": "DNA research : an international journal for rapid publication of reports on genes and genomes", "date": "2001-08-31", "authors": "Nagase T, Kikuno R, Ohara O", "reference": { "type": "PubMed", "id": "11572484", "url": "https://pubmed.ncbi.nlm.nih.gov/11572484" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8IUC8-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 13", "gene_name": "GALNT13", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q8IUC8", "url": "https://www.uniprot.org/uniprotkb/Q8IUC8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11572484", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Genetic correlates of longevity and selected age-related phenotypes: a genome-wide association study in the Framingham Study.", "journal": "BMC medical genetics", "date": "2007-09-19", "authors": "Lunetta Kathryn L, D'Agostino Ralph B, Karasik David, Benjamin Emelia J, Guo Chao-Yu, Govindaraju Raju, Kiel Douglas P, Kelly-Hayes Margaret, Massaro Joseph M, Pencina Michael J, Seshadri Sudha, Murabito Joanne M", "reference": { "type": "PubMed", "id": "17903295", "url": "https://pubmed.ncbi.nlm.nih.gov/17903295" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8IUC8-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 13", "gene_name": "GALNT13", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q8IUC8", "url": "https://www.uniprot.org/uniprotkb/Q8IUC8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.17903295", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "GWAS for discovery and replication of genetic loci associated with sudden cardiac arrest in patients with coronary artery disease.", "journal": "BMC cardiovascular disorders", "date": "2011", "authors": "Aouizerat BE, Vittinghoff E, Musone SL, Pawlikowska L, Kwok PY, Olgin JE, Tseng ZH", "reference": { "type": "PubMed", "id": "21658281", "url": "https://pubmed.ncbi.nlm.nih.gov/21658281" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8IUC8-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 13", "gene_name": "GALNT13", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q8IUC8", "url": "https://www.uniprot.org/uniprotkb/Q8IUC8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.21658281", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "EMR-linked GWAS study: investigation of variation landscape of loci for body mass index in children.", "journal": "Frontiers in genetics", "date": "2013", "authors": "Namjou Bahram, Keddache Mehdi, Marsolo Keith, Wagner Michael, Lingren Todd, Cobb Beth, Perry Cassandra, Kennebeck Stephanie, Holm Ingrid A, Li Rongling, Crimmins Nancy A, Martin Lisa, Solti Imre, Kohane Isaac S, Harley John B", "reference": { "type": "PubMed", "id": "24348519", "url": "https://pubmed.ncbi.nlm.nih.gov/24348519" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8IUC8-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 13", "gene_name": "GALNT13", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q8IUC8", "url": "https://www.uniprot.org/uniprotkb/Q8IUC8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.24348519", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "MicroRNA-424 Predicts a Role for beta-1,4 Branched Glycosylation in Cell Cycle Progression.", "journal": "The Journal of biological chemistry", "date": "2016", "authors": "Vaiana CA, Kurcon T, Mahal LK", "reference": { "type": "PubMed", "id": "26589799", "url": "https://pubmed.ncbi.nlm.nih.gov/26589799" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8IUC8-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 13", "gene_name": "GALNT13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UM21-1", "protein_name": "Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A", "gene_name": "MGAT4A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q8IUC8", "url": "https://www.uniprot.org/uniprotkb/Q8IUC8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.26589799", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Increased expression levels of ppGalNAc-T13 in lung cancers: Significance in the prognostic diagnosis.", "journal": "International journal of oncology", "date": "2016", "authors": "Nogimori K, Hori T, Kawaguchi K, Fukui T, Mii S, Nakada H, Matsumoto Y, Yamauchi Y, Takahashi M, Furukawa K, Tetsuya O, Yokoi K, Hasegawa Y, Furukawa K", "reference": { "type": "PubMed", "id": "27499036", "url": "https://pubmed.ncbi.nlm.nih.gov/27499036" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8IUC8-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 13", "gene_name": "GALNT13", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q8IUC8", "url": "https://www.uniprot.org/uniprotkb/Q8IUC8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.27499036", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Revisiting the human polypeptide GalNAc-T1 and T13 paralogs.", "journal": "Glycobiology", "date": "2017", "authors": "Festari MF, Trajtenberg F, Berois N, Pantano S, Revoredo L, Kong Y, Solari-Saquieres P, Narimatsu Y, Freire T, Bay S, Robello C, Benard J, Gerken TA, Clausen H, Osinaga E", "reference": { "type": "PubMed", "id": "27913570", "url": "https://pubmed.ncbi.nlm.nih.gov/27913570" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8IUC8-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 13", "gene_name": "GALNT13", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q8IUC8", "url": "https://www.uniprot.org/uniprotkb/Q8IUC8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.27913570", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The orphan nuclear receptor ROR alpha is a negative regulator of the inflammatory response.", "journal": "EMBO reports", "date": "2001-01", "authors": "Delerive P, Mont\u00e9 D, Dubois G, Trottein F, Fruchart-Najib J, Mariani J, Fruchart J C, Staels B", "reference": { "type": "PubMed", "id": "11252722", "url": "https://pubmed.ncbi.nlm.nih.gov/11252722" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P35398-2", "protein_name": "Nuclear receptor ROR-alpha", "gene_name": "RORA", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11252722", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of a novel peroxisome proliferator-activated receptor (PPAR) gamma promoter in man and transactivation by the nuclear receptor RORalpha1.", "journal": "Biochemical and biophysical research communications", "date": "2001-09-21", "authors": "Sundvold H, Lien S", "reference": { "type": "PubMed", "id": "11554739", "url": "https://pubmed.ncbi.nlm.nih.gov/11554739" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P35398-2", "protein_name": "Nuclear receptor ROR-alpha", "gene_name": "RORA", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11554739", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "X-ray structure of the hRORalpha LBD at 1.63 A: structural and functional data that cholesterol or a cholesterol derivative is the natural ligand of RORalpha.", "journal": "Structure (London, England : 1993)", "date": "2002", "authors": "Kallen JA, Schlaeppi JM, Bitsch F, Geisse S, Geiser M, Delhon I, Fournier B", "reference": { "type": "PubMed", "id": "12467577", "url": "https://pubmed.ncbi.nlm.nih.gov/12467577" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P35398-2", "protein_name": "Nuclear receptor ROR-alpha", "gene_name": "RORA", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 323, "end_pos": 323, "sequence_org": "C", "sequence_mut": "L", "comment": "About 60% loss of transcriptional activity.", "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" }, { "database": "PubMed", "id": "12467577", "url": "https://pubmed.ncbi.nlm.nih.gov/12467577" }, { "database": "PubMed", "id": "14722075", "url": "https://pubmed.ncbi.nlm.nih.gov/14722075" } ], "uniprot_canonical_ac": "P35398-2" }, { "start_pos": 330, "end_pos": 330, "sequence_org": "A", "sequence_mut": "L", "comment": "About 80% loss of transcriptional activity.", "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" }, { "database": "PubMed", "id": "12467577", "url": "https://pubmed.ncbi.nlm.nih.gov/12467577" }, { "database": "PubMed", "id": "14722075", "url": "https://pubmed.ncbi.nlm.nih.gov/14722075" } ], "uniprot_canonical_ac": "P35398-2" }, { "start_pos": 371, "end_pos": 371, "sequence_org": "A", "sequence_mut": "Q", "comment": "Almost total loss of transcriptional activity.", "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" }, { "database": "PubMed", "id": "12467577", "url": "https://pubmed.ncbi.nlm.nih.gov/12467577" } ], "uniprot_canonical_ac": "P35398-2" }, { "start_pos": 399, "end_pos": 399, "sequence_org": "F", "sequence_mut": "W", "comment": "Slight loss of transcriptional activity.", "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" }, { "database": "PubMed", "id": "12467577", "url": "https://pubmed.ncbi.nlm.nih.gov/12467577" } ], "uniprot_canonical_ac": "P35398-2" }, { "start_pos": 484, "end_pos": 484, "sequence_org": "H", "sequence_mut": "W", "comment": "Almost total loss of transcriptional activity.", "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" }, { "database": "PubMed", "id": "12467577", "url": "https://pubmed.ncbi.nlm.nih.gov/12467577" } ], "uniprot_canonical_ac": "P35398-2" }, { "start_pos": 507, "end_pos": 507, "sequence_org": "Y", "sequence_mut": "A", "comment": "Complete loss of transcriptional activity; when associated with A-339.", "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" }, { "database": "PubMed", "id": "12467577", "url": "https://pubmed.ncbi.nlm.nih.gov/12467577" } ], "uniprot_canonical_ac": "P35398-2" }, { "start_pos": 507, "end_pos": 507, "sequence_org": "Y", "sequence_mut": "F", "comment": "About 40% loss of transcriptional activity.", "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" }, { "database": "PubMed", "id": "12467577", "url": "https://pubmed.ncbi.nlm.nih.gov/12467577" } ], "uniprot_canonical_ac": "P35398-2" } ], "record_id": "pubmed.12467577", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The co-repressor hairless protects RORalpha orphan nuclear receptor from proteasome-mediated degradation.", "journal": "The Journal of biological chemistry", "date": "2003", "authors": "Moraitis AN, Giguere V", "reference": { "type": "PubMed", "id": "14570920", "url": "https://pubmed.ncbi.nlm.nih.gov/14570920" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P35398-2", "protein_name": "Nuclear receptor ROR-alpha", "gene_name": "RORA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P97609-1", "protein_name": "Lysine-specific demethylase hairless", "gene_name": "Hr", "tax_name": "Rat" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 357, "end_pos": 357, "sequence_org": "K", "sequence_mut": "A", "comment": "Increased transcriptional activity. No effect on protein degradation.", "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" }, { "database": "PubMed", "id": "14570920", "url": "https://pubmed.ncbi.nlm.nih.gov/14570920" } ], "uniprot_canonical_ac": "P35398-2" }, { "start_pos": 361, "end_pos": 361, "sequence_org": "L", "sequence_mut": "F", "comment": "Small reduction in transcriptional activity. No protein degradation.", "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" }, { "database": "PubMed", "id": "14570920", "url": "https://pubmed.ncbi.nlm.nih.gov/14570920" } ], "uniprot_canonical_ac": "P35398-2" }, { "start_pos": 364, "end_pos": 364, "sequence_org": "V", "sequence_mut": "G", "comment": "Greatly reduced transcriptional activity. Protects from protein degradation.", "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" }, { "database": "PubMed", "id": "14570920", "url": "https://pubmed.ncbi.nlm.nih.gov/14570920" } ], "uniprot_canonical_ac": "P35398-2" }, { "start_pos": 509, "end_pos": 509, "sequence_org": "E", "sequence_mut": "K", "comment": "Abolishes transcriptional activity. Protects from protein degradation.", "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" }, { "database": "PubMed", "id": "14722075", "url": "https://pubmed.ncbi.nlm.nih.gov/14722075" }, { "database": "PubMed", "id": "14570920", "url": "https://pubmed.ncbi.nlm.nih.gov/14570920" } ], "uniprot_canonical_ac": "P35398-2" }, { "start_pos": 563, "end_pos": 564, "sequence_org": "LL", "sequence_mut": "AA", "comment": "Decreases RORA protein stability. Strongly decreases RORA protein stability; when associated with 752-L--A-756.", "evidence": [ { "database": "UniProtKB", "id": "P97609", "url": "https://www.uniprot.org/uniprotkb/P97609" }, { "database": "PubMed", "id": "14570920", "url": "https://pubmed.ncbi.nlm.nih.gov/14570920" } ], "uniprot_canonical_ac": "P97609-1" } ], "record_id": "pubmed.14570920", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Crystal structure of the human RORalpha Ligand binding domain in complex with cholesterol sulfate at 2.2 A.", "journal": "The Journal of biological chemistry", "date": "2004", "authors": "Kallen J, Schlaeppi JM, Bitsch F, Delhon I, Fournier B", "reference": { "type": "PubMed", "id": "14722075", "url": "https://pubmed.ncbi.nlm.nih.gov/14722075" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P35398-2", "protein_name": "Nuclear receptor ROR-alpha", "gene_name": "RORA", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 288, "end_pos": 288, "sequence_org": "C", "sequence_mut": "Q", "comment": "Less effect on transcriptional activity with cholesterol sulfate as substrate as compared to cholesterol as substrate.", "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" }, { "database": "PubMed", "id": "14722075", "url": "https://pubmed.ncbi.nlm.nih.gov/14722075" } ], "uniprot_canonical_ac": "P35398-2" }, { "start_pos": 323, "end_pos": 323, "sequence_org": "C", "sequence_mut": "L", "comment": "About 60% loss of transcriptional activity.", "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" }, { "database": "PubMed", "id": "12467577", "url": "https://pubmed.ncbi.nlm.nih.gov/12467577" }, { "database": "PubMed", "id": "14722075", "url": "https://pubmed.ncbi.nlm.nih.gov/14722075" } ], "uniprot_canonical_ac": "P35398-2" }, { "start_pos": 330, "end_pos": 330, "sequence_org": "A", "sequence_mut": "L", "comment": "About 80% loss of transcriptional activity.", "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" }, { "database": "PubMed", "id": "12467577", "url": "https://pubmed.ncbi.nlm.nih.gov/12467577" }, { "database": "PubMed", "id": "14722075", "url": "https://pubmed.ncbi.nlm.nih.gov/14722075" } ], "uniprot_canonical_ac": "P35398-2" }, { "start_pos": 339, "end_pos": 339, "sequence_org": "K", "sequence_mut": "A", "comment": "Complete loss of transcriptional activity; when associated with A-507.", "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" }, { "database": "PubMed", "id": "14722075", "url": "https://pubmed.ncbi.nlm.nih.gov/14722075" } ], "uniprot_canonical_ac": "P35398-2" }, { "start_pos": 509, "end_pos": 509, "sequence_org": "E", "sequence_mut": "K", "comment": "Abolishes transcriptional activity. Protects from protein degradation.", "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" }, { "database": "PubMed", "id": "14722075", "url": "https://pubmed.ncbi.nlm.nih.gov/14722075" }, { "database": "PubMed", "id": "14570920", "url": "https://pubmed.ncbi.nlm.nih.gov/14570920" } ], "uniprot_canonical_ac": "P35398-2" } ], "record_id": "pubmed.14722075", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Hypoxia-induced activation of the retinoic acid receptor-related orphan receptor alpha4 gene by an interaction between hypoxia-inducible factor-1 and Sp1.", "journal": "J. Biol. Chem.", "date": "2004", "authors": "Miki Naoki, Ikuta Megumi, Matsui Takashi", "reference": { "type": "PubMed", "id": "14742449", "url": "https://pubmed.ncbi.nlm.nih.gov/14742449" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P35398-2", "protein_name": "Nuclear receptor ROR-alpha", "gene_name": "RORA", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.14742449", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of the human ApoAV gene as a novel RORalpha target gene.", "journal": "Biochemical and biophysical research communications", "date": "2005-04-29", "authors": "Lind Ulrika, Nilsson Tina, McPheat Jane, Str\u00f6mstedt Per-Erik, Bamberg Krister, Balendran Clare, Kang Daiwu", "reference": { "type": "PubMed", "id": "15781255", "url": "https://pubmed.ncbi.nlm.nih.gov/15781255" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P35398-2", "protein_name": "Nuclear receptor ROR-alpha", "gene_name": "RORA", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15781255", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Transcriptional regulation of apolipoprotein A5 gene expression by the nuclear receptor RORalpha.", "journal": "Arteriosclerosis, thrombosis, and vascular biology", "date": "2005-06", "authors": "Genoux Annelise, Dehondt H\u00e9l\u00e8ne, Helleboid-Chapman Audrey, Duhem Christian, Hum Dean W, Martin Genevi\u00e8ve, Pennacchio Len A, Staels Bart, Fruchart-Najib Jamila, Fruchart Jean-Charles", "reference": { "type": "PubMed", "id": "15790933", "url": "https://pubmed.ncbi.nlm.nih.gov/15790933" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P35398-2", "protein_name": "Nuclear receptor ROR-alpha", "gene_name": "RORA", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15790933", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "RORA, a large common fragile site gene, is involved in cellular stress response.", "journal": "Oncogene", "date": "2006-05-11", "authors": "Zhu Y, McAvoy S, Kuhn R, Smith D I", "reference": { "type": "PubMed", "id": "16462772", "url": "https://pubmed.ncbi.nlm.nih.gov/16462772" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P35398-2", "protein_name": "Nuclear receptor ROR-alpha", "gene_name": "RORA", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.16462772", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Extracellular signal-regulated kinase-2 phosphorylates RORalpha4 in vitro.", "journal": "Biochemical and biophysical research communications", "date": "2007", "authors": "Lechtken A, Hornig M, Werz O, Corvey N, Zundorf I, Dingermann T, Brandes R, Steinhilber D", "reference": { "type": "PubMed", "id": "17512500", "url": "https://pubmed.ncbi.nlm.nih.gov/17512500" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P35398-2", "protein_name": "Nuclear receptor ROR-alpha", "gene_name": "RORA", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 183, "end_pos": 183, "sequence_org": "T", "sequence_mut": "A", "comment": "Greatly increased transcriptional activity. Decrease in repression by NR1D1.", "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" }, { "database": "PubMed", "id": "17512500", "url": "https://pubmed.ncbi.nlm.nih.gov/17512500" } ], "uniprot_canonical_ac": "P35398-2" }, { "start_pos": 183, "end_pos": 183, "sequence_org": "T", "sequence_mut": "D", "comment": "Some increase in transcriptional activity. No change in repression by NR1D1.", "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" }, { "database": "PubMed", "id": "17512500", "url": "https://pubmed.ncbi.nlm.nih.gov/17512500" } ], "uniprot_canonical_ac": "P35398-2" }, { "start_pos": 183, "end_pos": 183, "sequence_org": "T", "sequence_mut": "E", "comment": "Some increase in transcriptional activity. No change in repression by NR1D1.", "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" }, { "database": "PubMed", "id": "17512500", "url": "https://pubmed.ncbi.nlm.nih.gov/17512500" } ], "uniprot_canonical_ac": "P35398-2" }, { "start_pos": 183, "end_pos": 183, "sequence_org": "T", "sequence_mut": "I", "comment": "Some increase in transcriptional activity.", "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" }, { "database": "PubMed", "id": "17512500", "url": "https://pubmed.ncbi.nlm.nih.gov/17512500" } ], "uniprot_canonical_ac": "P35398-2" }, { "start_pos": 183, "end_pos": 183, "sequence_org": "T", "sequence_mut": "R", "comment": "Attenuates transcriptional activity.", "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" }, { "database": "PubMed", "id": "17512500", "url": "https://pubmed.ncbi.nlm.nih.gov/17512500" } ], "uniprot_canonical_ac": "P35398-2" }, { "start_pos": 183, "end_pos": 183, "sequence_org": "T", "sequence_mut": "V", "comment": "Some increase in transcriptional activity.", "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" }, { "database": "PubMed", "id": "17512500", "url": "https://pubmed.ncbi.nlm.nih.gov/17512500" } ], "uniprot_canonical_ac": "P35398-2" } ], "phosphorylation": [ { "start_pos": 183, "end_pos": 183, "kinase_uniprot_canonical_ac": "P28482-1", "kinase_gene_name": "MAPK1", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "P35398", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P35398" }, { "database": "PubMed", "id": "17512500", "url": "https://pubmed.ncbi.nlm.nih.gov/17512500" } ], "site_lbl": "Thr183", "uniprot_canonical_ac": "P35398-2" }, { "start_pos": 183, "end_pos": 183, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "Phosphothreonine; by MAPK1", "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" }, { "database": "iPTMnet", "id": "P35398", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P35398" }, { "database": "PubMed", "id": "17512500", "url": "https://pubmed.ncbi.nlm.nih.gov/17512500" } ], "site_lbl": "Thr183", "uniprot_canonical_ac": "P35398-2" } ], "record_id": "pubmed.17512500", "abstract": "", "glycosylation": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Phosphorylation and transcriptional activity regulation of retinoid-related orphan receptor alpha 1 by protein kinases C.", "journal": "Journal of neurochemistry", "date": "2008", "authors": "Duplus E, Gras C, Soubeyre V, Vodjdani G, Lemaigre-Dubreuil Y, Brugg B", "reference": { "type": "PubMed", "id": "18005000", "url": "https://pubmed.ncbi.nlm.nih.gov/18005000" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P35398-2", "protein_name": "Nuclear receptor ROR-alpha", "gene_name": "RORA", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.18005000", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "RORalpha attenuates Wnt/beta-catenin signaling by PKCalpha-dependent phosphorylation in colon cancer.", "journal": "Molecular cell", "date": "2010", "authors": "Lee JM, Kim IS, Kim H, Lee JS, Kim K, Yim HY, Jeong J, Kim JH, Kim JY, Lee H, Seo SB, Kim H, Rosenfeld MG, Kim KI, Baek SH", "reference": { "type": "PubMed", "id": "20122401", "url": "https://pubmed.ncbi.nlm.nih.gov/20122401" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P35398-2", "protein_name": "Nuclear receptor ROR-alpha", "gene_name": "RORA", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 35, "end_pos": 35, "kinase_uniprot_canonical_ac": "P17252-1", "kinase_gene_name": "PRKCA", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "P35398", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P35398" }, { "database": "PubMed", "id": "20122401", "url": "https://pubmed.ncbi.nlm.nih.gov/20122401" } ], "site_lbl": "Ser35", "uniprot_canonical_ac": "P35398-2" } ], "record_id": "pubmed.20122401", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "ROR\u03b1 phosphorylation by casein kinase 1\u03b1 as glucose signal to regulate estrogen sulfation in human liver cells.", "journal": "The Biochemical journal", "date": "2020-09-30", "authors": "Hu Hao, Negishi Masahiko", "reference": { "type": "PubMed", "id": "32686824", "url": "https://pubmed.ncbi.nlm.nih.gov/32686824" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P35398-2", "protein_name": "Nuclear receptor ROR-alpha", "gene_name": "RORA", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 100, "end_pos": 100, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "P35398", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P35398" }, { "database": "PubMed", "id": "32686824", "url": "https://pubmed.ncbi.nlm.nih.gov/32686824" } ], "site_lbl": "Ser100", "uniprot_canonical_ac": "P35398-2" } ], "record_id": "pubmed.32686824", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Novel Therapeutic Potential of Retinoid-Related Orphan Receptor \u03b1 in Cardiovascular Diseases.", "journal": "International journal of molecular sciences", "date": "2023-02-09", "authors": "Chen Yun, Zhang Shu-Ping, Gong Wei-Wei, Zheng Yang-Yang, Shen Jie-Ru, Liu Xiao, Gu Yun-Hui, Shi Jia-Hai, Meng Guo-Liang", "reference": { "type": "PubMed", "id": "36834872", "url": "https://pubmed.ncbi.nlm.nih.gov/36834872" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P35398-2", "protein_name": "Nuclear receptor ROR-alpha", "gene_name": "RORA", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.36834872", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The single-cell transcriptomic atlas and RORA-mediated 3D epigenomic remodeling in driving corneal epithelial differentiation.", "journal": "Nature communications", "date": "2024-01-04", "authors": "Li Mingsen, Guo Huizhen, Wang Bofeng, Han Zhuo, Wu Siqi, Liu Jiafeng, Huang Huaxing, Zhu Jin, An Fengjiao, Lin Zesong, Mo Kunlun, Tan Jieying, Liu Chunqiao, Wang Li, Deng Xin, Li Guigang, Ji Jianping, Ouyang Hong", "reference": { "type": "PubMed", "id": "38177186", "url": "https://pubmed.ncbi.nlm.nih.gov/38177186" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P35398-2", "protein_name": "Nuclear receptor ROR-alpha", "gene_name": "RORA", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.38177186", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Retinoic acid related orphan receptor \u03b1 is a genetic modifier that rescues retinal degeneration in a mouse model of Stargardt disease and Dry AMD.", "journal": "Gene therapy", "date": "2024-07", "authors": "Akula M, McNamee S M, Love Z, Nasraty N, Chan N P M, Whalen M, Avola M O, Olivares A M, Leehy B D, Jelcick A S, Singh P, Upadhyay A K, Chen D F, Haider N B", "reference": { "type": "PubMed", "id": "38755404", "url": "https://pubmed.ncbi.nlm.nih.gov/38755404" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P35398-2", "protein_name": "Nuclear receptor ROR-alpha", "gene_name": "RORA", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.38755404", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Tumoral periprostatic adipose tissue exovesicles-derived miR-20a-5p regulates prostate cancer cell proliferation and inflammation through the RORA gene.", "journal": "Journal of translational medicine", "date": "2024-07-15", "authors": "S\u00e1nchez-Martin Silvia, Altuna-Coy Antonio, Arreaza-Gil Ver\u00f3nica, Bernal-Escot\u00e9 Xana, Fontgivell Joan Francesc Garcia, Ascaso-Til Helena, Segarra-Tom\u00e1s Jos\u00e9, Ruiz-Plazas Xavier, Chac\u00f3n Matilde R", "reference": { "type": "PubMed", "id": "39010137", "url": "https://pubmed.ncbi.nlm.nih.gov/39010137" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P35398-2", "protein_name": "Nuclear receptor ROR-alpha", "gene_name": "RORA", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.39010137", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Retinoic acid receptor-related orphan receptor alpha and synthetic ROR\u03b1 agonist against invasion and metastasis in tongue squamous cell carcinoma.", "journal": "Biochemical and biophysical research communications", "date": "2024-11-12", "authors": "Wang Mohan, Zeng Ran, Zheng Shuang, Qian Yong", "reference": { "type": "PubMed", "id": "39047426", "url": "https://pubmed.ncbi.nlm.nih.gov/39047426" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P35398-2", "protein_name": "Nuclear receptor ROR-alpha", "gene_name": "RORA", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.39047426", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of nuclear receptor mRNAs by RT-PCR amplification of conserved zinc-finger motif sequences.", "journal": "Biochem. Biophys. Res. Commun.", "date": "1993", "authors": "Becker-Andre M, Andre E, DeLamarter JF", "reference": { "type": "PubMed", "id": "7916608", "url": "https://pubmed.ncbi.nlm.nih.gov/7916608" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P35398-2", "protein_name": "Nuclear receptor ROR-alpha", "gene_name": "RORA", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.7916608", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Isoform-specific amino-terminal domains dictate DNA-binding properties of ROR alpha, a novel family of orphan hormone nuclear receptors.", "journal": "Genes & development", "date": "1994", "authors": "Giguere V, Tini M, Flock G, Ong E, Evans RM, Otulakowski G", "reference": { "type": "PubMed", "id": "7926749", "url": "https://pubmed.ncbi.nlm.nih.gov/7926749" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P35398-2", "protein_name": "Nuclear receptor ROR-alpha", "gene_name": "RORA", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.7926749", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Transcriptional activation and repression by RORalpha, an orphan nuclear receptor required for cerebellar development.", "journal": "Molecular endocrinology (Baltimore, Md.)", "date": "1997-10", "authors": "Harding H P, Atkins G B, Jaffe A B, Seo W J, Lazar M A", "reference": { "type": "PubMed", "id": "9328355", "url": "https://pubmed.ncbi.nlm.nih.gov/9328355" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P35398-2", "protein_name": "Nuclear receptor ROR-alpha", "gene_name": "RORA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75376-1", "protein_name": "Nuclear receptor corepressor 1", "gene_name": "NCOR1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P35398", "url": "https://www.uniprot.org/uniprotkb/P35398" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9328355", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The c-Myc target gene PRDX3 is required for mitochondrial homeostasis and neoplastic transformation.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2002", "authors": "Wonsey DR, Zeller KI, Dang CV", "reference": { "type": "PubMed", "id": "12011429", "url": "https://pubmed.ncbi.nlm.nih.gov/12011429" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P30048-1", "protein_name": "Thioredoxin-dependent peroxide reductase, mitochondrial", "gene_name": "PRDX3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P30048", "url": "https://www.uniprot.org/uniprotkb/P30048" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12011429", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Redox potential and peroxide reactivity of human peroxiredoxin 3.", "journal": "Biochemistry", "date": "2009", "authors": "Cox Andrew G, Peskin Alexander V, Paton Louise N, Winterbourn Christine C, Hampton Mark B", "reference": { "type": "PubMed", "id": "19462976", "url": "https://pubmed.ncbi.nlm.nih.gov/19462976" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P30048-1", "protein_name": "Thioredoxin-dependent peroxide reductase, mitochondrial", "gene_name": "PRDX3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P30048", "url": "https://www.uniprot.org/uniprotkb/P30048" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.19462976", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Mutations in LRRK2 increase phosphorylation of peroxiredoxin 3 exacerbating oxidative stress-induced neuronal death.", "journal": "Human mutation", "date": "2011", "authors": "Angeles DC, Gan BH, Onstead L, Zhao Y, Lim KL, Dachsel J, Melrose H, Farrer M, Wszolek ZK, Dickson DW, Tan EK", "reference": { "type": "PubMed", "id": "21850687", "url": "https://pubmed.ncbi.nlm.nih.gov/21850687" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P30048-1", "protein_name": "Thioredoxin-dependent peroxide reductase, mitochondrial", "gene_name": "PRDX3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5S007-1", "protein_name": "Leucine-rich repeat serine/threonine-protein kinase 2", "gene_name": "LRRK2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P30048", "url": "https://www.uniprot.org/uniprotkb/P30048" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 146, "end_pos": 146, "sequence_org": "T", "sequence_mut": "A", "comment": "Impairs phosphorylation.", "evidence": [ { "database": "UniProtKB", "id": "P30048", "url": "https://www.uniprot.org/uniprotkb/P30048" }, { "database": "PubMed", "id": "21850687", "url": "https://pubmed.ncbi.nlm.nih.gov/21850687" } ], "uniprot_canonical_ac": "P30048-1" } ], "phosphorylation": [ { "start_pos": 146, "end_pos": 146, "kinase_uniprot_canonical_ac": "Q5S007-1", "kinase_gene_name": "LRRK2", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "P30048", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P30048" }, { "database": "PubMed", "id": "21850687", "url": "https://pubmed.ncbi.nlm.nih.gov/21850687" } ], "site_lbl": "Thr146", "uniprot_canonical_ac": "P30048-1" }, { "start_pos": 146, "end_pos": 146, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "Phosphothreonine", "evidence": [ { "database": "UniProtKB", "id": "P30048", "url": "https://www.uniprot.org/uniprotkb/P30048" }, { "database": "PubMed", "id": "21850687", "url": "https://pubmed.ncbi.nlm.nih.gov/21850687" }, { "database": "iPTMnet", "id": "P30048", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P30048" } ], "site_lbl": "Thr146", "uniprot_canonical_ac": "P30048-1" } ], "record_id": "pubmed.21850687", "abstract": "", "glycosylation": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structures of human peroxiredoxin 3 suggest self-chaperoning assembly that maintains catalytic state.", "journal": "Structure", "date": "2016", "authors": "Yewdall N Amy, Venugopal Hariprasad, Desfosses Ambroise, Abrishami Vahid, Yosaatmadja Yuliana, Hampton Mark B, Gerrard Juliet A, Goldstone David C, Mitra Alok K, Radjainia Mazdak", "reference": { "type": "PubMed", "id": "27238969", "url": "https://pubmed.ncbi.nlm.nih.gov/27238969" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P30048-1", "protein_name": "Thioredoxin-dependent peroxide reductase, mitochondrial", "gene_name": "PRDX3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P30048", "url": "https://www.uniprot.org/uniprotkb/P30048" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.27238969", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Quaternary structure influences the peroxidase activity of peroxiredoxin 3.", "journal": "Biochemical and biophysical research communications", "date": "2018", "authors": "Yewdall NA, Peskin AV, Hampton MB, Goldstone DC, Pearce FG, Gerrard JA", "reference": { "type": "PubMed", "id": "29438714", "url": "https://pubmed.ncbi.nlm.nih.gov/29438714" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P30048-1", "protein_name": "Thioredoxin-dependent peroxide reductase, mitochondrial", "gene_name": "PRDX3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P30048", "url": "https://www.uniprot.org/uniprotkb/P30048" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 136, "end_pos": 136, "sequence_org": "S", "sequence_mut": "E", "comment": "Forms obligate homodimers under reducing and oxidizing conditions; does not form dodecamer rings under reducing conditions.", "evidence": [ { "database": "UniProtKB", "id": "P30048", "url": "https://www.uniprot.org/uniprotkb/P30048" }, { "database": "PubMed", "id": "29438714", "url": "https://pubmed.ncbi.nlm.nih.gov/29438714" } ], "uniprot_canonical_ac": "P30048-1" }, { "start_pos": 139, "end_pos": 139, "sequence_org": "S", "sequence_mut": "C", "comment": "Forms predominantly dodecamer rings.", "evidence": [ { "database": "UniProtKB", "id": "P30048", "url": "https://www.uniprot.org/uniprotkb/P30048" }, { "database": "PubMed", "id": "29438714", "url": "https://pubmed.ncbi.nlm.nih.gov/29438714" } ], "uniprot_canonical_ac": "P30048-1" } ], "record_id": "pubmed.29438714", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Punctiform and Polychromatic Pre-Descemet Corneal Dystrophy: Clinical Evaluation and Identification of the Genetic Basis.", "journal": "American journal of ophthalmology", "date": "2020", "authors": "Alio Del Barrio JL, Chung DD, Al-Shymali O, Barrington A, Jatavallabhula K, Swamy VS, Yebana P, Angelica Henriquez-Recine M, Boto-de-Los-Bueis A, Alio JL, Aldave AJ", "reference": { "type": "PubMed", "id": "31782998", "url": "https://pubmed.ncbi.nlm.nih.gov/31782998" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P30048-1", "protein_name": "Thioredoxin-dependent peroxide reductase, mitochondrial", "gene_name": "PRDX3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P30048", "url": "https://www.uniprot.org/uniprotkb/P30048" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.31782998", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Confirmation of PRDX3 c.568G>C as the Genetic Basis of Punctiform and Polychromatic Pre-Descemet Corneal Dystrophy.", "journal": "Cornea", "date": "2022", "authors": "Choo CH, Boto de Los Bueis A, Chung DD, Aldave AJ", "reference": { "type": "PubMed", "id": "34369396", "url": "https://pubmed.ncbi.nlm.nih.gov/34369396" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P30048-1", "protein_name": "Thioredoxin-dependent peroxide reductase, mitochondrial", "gene_name": "PRDX3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P30048", "url": "https://www.uniprot.org/uniprotkb/P30048" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.34369396", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "PRDX3 promotes resistance to cisplatin in gastric cancer cells.", "journal": "Journal of cancer research and therapeutics", "date": "2022-12", "authors": "Yan Hao, Cai Xinyu, Fu Shanshan, Zhang Xiubin, Zhang Jianna", "reference": { "type": "PubMed", "id": "36647961", "url": "https://pubmed.ncbi.nlm.nih.gov/36647961" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P30048-1", "protein_name": "Thioredoxin-dependent peroxide reductase, mitochondrial", "gene_name": "PRDX3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P30048", "url": "https://www.uniprot.org/uniprotkb/P30048" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.36647961", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Knockdown of circSOD2 ameliorates osteoarthritis progression via the miR-224-5p/PRDX3 axis.", "journal": "Journal of orthopaedic surgery and research", "date": "2023-06-13", "authors": "Li Hao, Cao Yong, Chang Chongfei, Huang Wenping, Su Songchuan, Peng Zhenggang, Zhang Jiajin", "reference": { "type": "PubMed", "id": "37312219", "url": "https://pubmed.ncbi.nlm.nih.gov/37312219" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P30048-1", "protein_name": "Thioredoxin-dependent peroxide reductase, mitochondrial", "gene_name": "PRDX3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P30048", "url": "https://www.uniprot.org/uniprotkb/P30048" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.37312219", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "USP7-mediated ER\u03b2 stabilization mitigates ROS accumulation and promotes osimertinib resistance by suppressing PRDX3 SUMOylation in non-small cell lung carcinoma.", "journal": "Cancer letters", "date": "2024-02-01", "authors": "Meng Yunchong, Lin Wei, Wang Na, Wei Xiao, Mei Peiyuan, Wang Xiaojun, Zhang Chi, Huang Quanfu, Liao Yongde", "reference": { "type": "PubMed", "id": "38097136", "url": "https://pubmed.ncbi.nlm.nih.gov/38097136" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P30048-1", "protein_name": "Thioredoxin-dependent peroxide reductase, mitochondrial", "gene_name": "PRDX3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P30048", "url": "https://www.uniprot.org/uniprotkb/P30048" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.38097136", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Mammalian antioxidant protein complements alkylhydroperoxide reductase (ahpC) mutation in Escherichia coli.", "journal": "The Biochemical journal", "date": "1995", "authors": "Tsuji K, Copeland NG, Jenkins NA, Obinata M", "reference": { "type": "PubMed", "id": "7733872", "url": "https://pubmed.ncbi.nlm.nih.gov/7733872" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P30048-1", "protein_name": "Thioredoxin-dependent peroxide reductase, mitochondrial", "gene_name": "PRDX3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P30048", "url": "https://www.uniprot.org/uniprotkb/P30048" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.7733872", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structural insights into the dual nucleotide exchange and GDI displacement activity of SidM/DrrA.", "journal": "EMBO J.", "date": "2010", "authors": "Suh Hye-Young, Lee Dong-Won, Lee Kwang-Hoon, Ku Bonsu, Choi Sung-Jin, Woo Jae-Sung, Kim Yeon-Gil, Oh Byung-Ha", "reference": { "type": "PubMed", "id": "19942850", "url": "https://pubmed.ncbi.nlm.nih.gov/19942850" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P62820", "url": "https://www.uniprot.org/uniprotkb/P62820" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.19942850", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structural mechanism of host Rab1 activation by the bifunctional Legionella type IV effector SidM/DrrA.", "journal": "Proc. Natl. Acad. Sci. U.S.A.", "date": "2010", "authors": "Zhu Y, Hu L, Zhou Y, Yao Q, Liu L, Shao F", "reference": { "type": "PubMed", "id": "20176951", "url": "https://pubmed.ncbi.nlm.nih.gov/20176951" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P62820", "url": "https://www.uniprot.org/uniprotkb/P62820" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.20176951", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structural insights into a unique Legionella pneumophila effector LidA recognizing both GDP and GTP bound Rab1 in their active state.", "journal": "PLoS Pathog.", "date": "2012", "authors": "Cheng W, Yin K, Lu D, Li B, Zhu D, Chen Y, Zhang H, Xu S, Chai J, Gu L", "reference": { "type": "PubMed", "id": "22416225", "url": "https://pubmed.ncbi.nlm.nih.gov/22416225" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P62820", "url": "https://www.uniprot.org/uniprotkb/P62820" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.22416225", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structural analyses of Legionella LepB reveal a new GAP fold that catalytically mimics eukaryotic RasGAP.", "journal": "Cell Res.", "date": "2013", "authors": "Yu Q, Hu L, Yao Q, Zhu Y, Dong N, Wang DC, Shao F", "reference": { "type": "PubMed", "id": "23588383", "url": "https://pubmed.ncbi.nlm.nih.gov/23588383" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P62820", "url": "https://www.uniprot.org/uniprotkb/P62820" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.23588383", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The Legionella pneumophila GTPase activating protein LepB accelerates Rab1 deactivation by a non-canonical hydrolytic mechanism.", "journal": "J. Biol. Chem.", "date": "2013", "authors": "Mishra AK, Del Campo CM, Collins RE, Roy CR, Lambright DG", "reference": { "type": "PubMed", "id": "23821544", "url": "https://pubmed.ncbi.nlm.nih.gov/23821544" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P62820", "url": "https://www.uniprot.org/uniprotkb/P62820" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.23821544", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arginine GlcNAcylation of Rab small GTPases by the pathogen Salmonella Typhimurium.", "journal": "Communications biology", "date": "2020", "authors": "Meng K, Zhuang X, Peng T, Hu S, Yang J, Wang Z, Fu J, Xue J, Pan X, Lv J, Liu X, Shao F, Li S", "reference": { "type": "PubMed", "id": "32504010", "url": "https://pubmed.ncbi.nlm.nih.gov/32504010" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P62820", "url": "https://www.uniprot.org/uniprotkb/P62820" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 111, "end_pos": 111, "sequence_org": "R", "sequence_mut": "A", "comment": "Abolished arginine GlcNAcylation; when associated with A-74 and A-82. Abolished arginine GlcNAcylation; when associated with 72-A--A-74 and A-82.", "evidence": [ { "database": "UniProtKB", "id": "P62820", "url": "https://www.uniprot.org/uniprotkb/P62820" }, { "database": "PubMed", "id": "32504010", "url": "https://pubmed.ncbi.nlm.nih.gov/32504010" }, { "database": "PubMed", "id": "32974215", "url": "https://pubmed.ncbi.nlm.nih.gov/32974215" } ], "uniprot_canonical_ac": "P62820-1" }, { "start_pos": 72, "end_pos": 74, "sequence_org": "RFR", "sequence_mut": "AFA", "comment": "Abolished arginine GlcNAcylation; when associated with A-82 and A-111.", "evidence": [ { "database": "UniProtKB", "id": "P62820", "url": "https://www.uniprot.org/uniprotkb/P62820" }, { "database": "PubMed", "id": "32504010", "url": "https://pubmed.ncbi.nlm.nih.gov/32504010" } ], "uniprot_canonical_ac": "P62820-1" }, { "start_pos": 82, "end_pos": 82, "sequence_org": "R", "sequence_mut": "A", "comment": "Abolished arginine GlcNAcylation; when associated with A-74 and A-111. Abolished arginine GlcNAcylation; when associated with 72-A--A-74 and A-111.", "evidence": [ { "database": "UniProtKB", "id": "P62820", "url": "https://www.uniprot.org/uniprotkb/P62820" }, { "database": "PubMed", "id": "32504010", "url": "https://pubmed.ncbi.nlm.nih.gov/32504010" }, { "database": "PubMed", "id": "32974215", "url": "https://pubmed.ncbi.nlm.nih.gov/32974215" } ], "uniprot_canonical_ac": "P62820-1" } ], "record_id": "pubmed.32504010", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "SGOL2 promotes prostate cancer progression by inhibiting RAB1A ubiquitination.", "journal": "Aging", "date": "2022-12-23", "authors": "Lv Tingting, He Dongwei, Zhang Xiaokuan, Guo Xiaojin, Li Zijie, Zhang Aili, Fan Bo, Wang Zhiyu", "reference": { "type": "PubMed", "id": "36566018", "url": "https://pubmed.ncbi.nlm.nih.gov/36566018" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q562F6-1", "protein_name": "Shugoshin 2", "gene_name": "SGO2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P62820", "url": "https://www.uniprot.org/uniprotkb/P62820" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.36566018", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Subcellular Distribution of BALF2 and the Role of Rab1 in the Formation of Epstein-Barr Virus Cytoplasmic Assembly Compartment and Virion Release.", "journal": "Microbiology spectrum", "date": "2023-02-14", "authors": "Chao Tsung-Yu, Cheng Yi-Ying, Wang Zi-Yun, Fang Tien-Fang, Chang Yu-Ruei, Fuh Chi-Shane, Su Mei-Tzu, Su Yuan-Wei, Hsu Pang-Hung, Su Yu-Chen, Chang Yu-Ching, Lee Ting-Yau, Chou Wei-Han, Middeldorp Jaap M, Saraste Jaakko, Chen Mei-Ru", "reference": { "type": "PubMed", "id": "36602343", "url": "https://pubmed.ncbi.nlm.nih.gov/36602343" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P62820", "url": "https://www.uniprot.org/uniprotkb/P62820" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.36602343", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Prognosis value and positive association of Rab1A/IL4R\u03b1 aberrant expression in gastric cancer.", "journal": "Scientific reports", "date": "2023-04-28", "authors": "Li Haoran, Cheng Zhengwu, Jiang Bin, Shao Xinyu, Xu Menglin", "reference": { "type": "PubMed", "id": "37117331", "url": "https://pubmed.ncbi.nlm.nih.gov/37117331" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P62820", "url": "https://www.uniprot.org/uniprotkb/P62820" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.37117331", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "RAB1A haploinsufficiency phenocopies the 2p14-p15 microdeletion and is associated with impaired neuronal differentiation.", "journal": "American journal of human genetics", "date": "2023-12-07", "authors": "Rios Jonathan J, Li Yang, Paria Nandina, Bohlender Ryan J, Huff Chad, Rosenfeld Jill A, Liu Pengfei, Bi Weimin, Haga Kentaro, Fukuda Mitsunori, Vashisth Shayal, Kaur Kiran, Chahrour Maria H, Bober Michael B, Duker Angela L, Ladha Farah A, Hanchard Neil A, Atala Kristhen, Khanshour Anas M, Smith Linsley, Wise Carol A, Delgado Mauricio R", "reference": { "type": "PubMed", "id": "37924809", "url": "https://pubmed.ncbi.nlm.nih.gov/37924809" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P62820", "url": "https://www.uniprot.org/uniprotkb/P62820" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.37924809", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] } ]