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A", "date": "2018", "authors": "Hanson-Kahn A, Li B, Cohn DH, Nickerson DA, Bamshad MJ, Hudgins L", "reference": { "type": "PubMed", "id": "30450842", "url": "https://pubmed.ncbi.nlm.nih.gov/30450842" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q14050-1", "protein_name": "Collagen alpha-3(IX) chain", "gene_name": "COL9A3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q14050", "url": "https://www.uniprot.org/uniprotkb/Q14050" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.30450842", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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J.", "date": "1997", "authors": "Perala M, Savontaus M, Metsaranta M, Vuorio E", "reference": { "type": "PubMed", "id": "9164858", "url": "https://pubmed.ncbi.nlm.nih.gov/9164858" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q14050-1", "protein_name": "Collagen alpha-3(IX) chain", "gene_name": "COL9A3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q14050", "url": "https://www.uniprot.org/uniprotkb/Q14050" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9164858", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "hsa_circ_0072389, hsa_circ_0072386, hsa_circ_0008621, hsa_circ_0072387, and hsa_circ_0072391 aggravate glioma via miR-338-5p/IKBIP.", "journal": "Aging", "date": "2021", "authors": "Liang J, Li X, Xu J, Cai GM, Cao JX, Zhang B", "reference": { "type": "PubMed", "id": "34897031", "url": "https://pubmed.ncbi.nlm.nih.gov/34897031" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q70UQ0-1", "protein_name": "Inhibitor of nuclear factor kappa-B kinase-interacting protein", "gene_name": "IKBIP", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", 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[] } ] }, { "title": "IKBIP, a novel glioblastoma biomarker, maintains abnormal proliferation of tumor cells by inhibiting the ubiquitination and degradation of CDK4.", "journal": "Biochimica et biophysica acta. Molecular basis of disease", "date": "2023-01-01", "authors": "Li Kaishu, Huang Guanglong, Wang Ziyu, Yang Runwei, Zhang Wanghao, Ni Bowen, Guan Jingyu, Yi Guozhong, Li Zhiyong, Zhu Qihui, Peng Qian, Yang Lunhao, Qi Ling, Liu Yawei", "reference": { "type": "PubMed", "id": "36244542", "url": "https://pubmed.ncbi.nlm.nih.gov/36244542" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q70UQ0-1", "protein_name": "Inhibitor of nuclear factor kappa-B kinase-interacting protein", "gene_name": "IKBIP", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q70UQ0", "url": "https://www.uniprot.org/uniprotkb/Q70UQ0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.36244542", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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Nachnani R, Kalur A, Megahed H, Incecik F, Danda S, Alanay Y, Faqeih E, Melikishvili G, Mansour L, Miller I, Sukhudyan B, Chelly J, Dobyns WB, Bilguvar K, Jamra RA, Gunel M, Gleeson JG", "reference": { "type": "PubMed", "id": "30013181", "url": "https://pubmed.ncbi.nlm.nih.gov/30013181" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P26232-1", "protein_name": "Catenin alpha-2", "gene_name": "CTNNA2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P26232", "url": "https://www.uniprot.org/uniprotkb/P26232" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.30013181", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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maintaining translation of CDT1 and CDC6 in HaCaT cells.", "journal": "Biochem. Biophys. Res. 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[] } ] }, { "title": "Identification of a novel nuclear speckle-type protein, SPOP.", "journal": "FEBS Lett.", "date": "1997", "authors": "Nagai Y, Kojima T, Muro Y, Hachiya T, Nishizawa Y, Wakabayashi T, Hagiwara M", "reference": { "type": "PubMed", "id": "9414087", "url": "https://pubmed.ncbi.nlm.nih.gov/9414087" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O43791-1", "protein_name": "Speckle-type POZ protein", "gene_name": "SPOP", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O43791", "url": "https://www.uniprot.org/uniprotkb/O43791" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9414087", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 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Cancer Res.", "date": "2005", "authors": "Barbashina V, Salazar P, Holland EC, Rosenblum MK, Ladanyi M", "reference": { "type": "PubMed", "id": "15709179", "url": "https://pubmed.ncbi.nlm.nih.gov/15709179" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y6Y1-1", "protein_name": "Calmodulin-binding transcription activator 1", "gene_name": "CAMTA1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y6Y1", "url": "https://www.uniprot.org/uniprotkb/Q9Y6Y1" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15709179", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Intragenic CAMTA1 rearrangements cause non-progressive congenital ataxia with or without intellectual disability.", "journal": "J. 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experimental autoimmune encephalomyelitis with ordered peptides based on MHC-TCR binding motifs.", "journal": "Journal of immunology (Baltimore, Md. : 1950)", "date": "2001-09-01", "authors": "Ruiz P J, DeVoss J J, Nguyen L V, Fontoura P P, Hirschberg D L, Mitchell D J, Garcia K C, Steinman L", "reference": { "type": "PubMed", "id": "11509612", "url": "https://pubmed.ncbi.nlm.nih.gov/11509612" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P02686-1", "protein_name": "Myelin basic protein", "gene_name": "MBP", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P02686", "url": "https://www.uniprot.org/uniprotkb/P02686" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11509612", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { 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chain genes expressed by human T cells specific for similar myelin basic protein peptide/major histocompatibility complexes.", "journal": "European journal of immunology", "date": "1992-03", "authors": "Giegerich G, Pette M, Meinl E, Epplen J T, Wekerle H, Hinkkanen A", "reference": { "type": "PubMed", "id": "1372258", "url": "https://pubmed.ncbi.nlm.nih.gov/1372258" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P02686-1", "protein_name": "Myelin basic protein", "gene_name": "MBP", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P02686", "url": "https://www.uniprot.org/uniprotkb/P02686" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.1372258", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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"sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structure of a human autoimmune TCR bound to a myelin basic protein self-peptide and a multiple sclerosis-associated MHC class II molecule.", "journal": "EMBO J.", "date": "2005", "authors": "Li Yili, Huang Yuping, Lue Jessica, Quandt Jacqueline A, Martin Roland, Mariuzza Roy A", "reference": { "type": "PubMed", "id": "16079912", "url": "https://pubmed.ncbi.nlm.nih.gov/16079912" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P02686-1", "protein_name": "Myelin basic protein", "gene_name": "MBP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01848-1", "protein_name": "T cell receptor alpha chain constant", "gene_name": "TRAC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q30154-1", "protein_name": "HLA class II histocompatibility antigen, DR beta 5 chain", "gene_name": "HLA-DRB5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01903-1", "protein_name": "HLA class II histocompatibility antigen, DR alpha chain", "gene_name": "HLA-DRA", "tax_name": "Human" } ], "species": [ { "name": "Homo 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[] } ] }, { "title": "Effect of phosphorylation of myelin basic protein by MAPK on its interactions with actin and actin binding to a lipid membrane in vitro.", "journal": "Biochemistry", "date": "2006", "authors": "Boggs JM, Rangaraj G, Gao W, Heng YM", "reference": { "type": "PubMed", "id": "16401070", "url": "https://pubmed.ncbi.nlm.nih.gov/16401070" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P02686-1", "protein_name": "Myelin basic protein", "gene_name": "MBP", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P02686", "url": "https://www.uniprot.org/uniprotkb/P02686" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 232, "end_pos": 232, "kinase_uniprot_canonical_ac": "P27361-1", "kinase_gene_name": "MAPK3", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "P02686", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P02686" }, { "database": "PubMed", "id": "16401070", "url": "https://pubmed.ncbi.nlm.nih.gov/16401070" }, { "database": "PubMed", "id": "1939237", "url": "https://pubmed.ncbi.nlm.nih.gov/1939237" } ], "site_lbl": "Thr232", "uniprot_canonical_ac": "P02686-1" }, { "start_pos": 232, "end_pos": 232, "kinase_uniprot_canonical_ac": "P28482-1", "kinase_gene_name": "MAPK1", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "P02686", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P02686" }, { "database": "PubMed", "id": "12760422", "url": "https://pubmed.ncbi.nlm.nih.gov/12760422" }, { "database": "PubMed", "id": "16401070", "url": "https://pubmed.ncbi.nlm.nih.gov/16401070" }, { "database": "PubMed", "id": "1939237", "url": "https://pubmed.ncbi.nlm.nih.gov/1939237" } ], "site_lbl": "Thr232", "uniprot_canonical_ac": "P02686-1" }, { "start_pos": 299, "end_pos": 299, 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"count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": 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