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[] } ] }, { "title": "The role of DNA in the mechanism of NFkappaB dimer formation: crystal structures of the dimerization domains of the p50 and p65 subunits.", "journal": "Structure (London, England : 1993)", "date": "1997-11-15", "authors": "Huang D B, Huxford T, Chen Y Q, Ghosh G", "reference": { "type": "PubMed", "id": "9384558", "url": "https://pubmed.ncbi.nlm.nih.gov/9384558" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P25799-1", "protein_name": "Nuclear factor NF-kappa-B p105 subunit", "gene_name": "Nfkb1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P25799", "url": "https://www.uniprot.org/uniprotkb/P25799" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.9384558", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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Biol. Chem.", "date": "2002", "authors": "Makino Y, Kanopka A, Wilson WJ, Tanaka H, Poellinger L", "reference": { "type": "PubMed", "id": "12119283", "url": "https://pubmed.ncbi.nlm.nih.gov/12119283" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q0VBL6-1", "protein_name": "Hypoxia-inducible factor 3-alpha", "gene_name": "Hif3a", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q0VBL6", "url": "https://www.uniprot.org/uniprotkb/Q0VBL6" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.12119283", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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"reference": { "type": "PubMed", "id": "19101625", "url": "https://pubmed.ncbi.nlm.nih.gov/19101625" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9D5L7-1", "protein_name": "SPRY domain-containing SOCS box protein 1", "gene_name": "Spsb1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9D5L7", "url": "https://www.uniprot.org/uniprotkb/Q9D5L7" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.19101625", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], 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Transforming Growth Factor-beta Signaling Pathway Targeting the Type II Receptor.", "journal": "The Journal of biological chemistry", "date": "2015", "authors": "Liu S, Nheu T, Luwor R, Nicholson SE, Zhu HJ", "reference": { "type": "PubMed", "id": "26032413", "url": "https://pubmed.ncbi.nlm.nih.gov/26032413" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9D5L7-1", "protein_name": "SPRY domain-containing SOCS box protein 1", "gene_name": "Spsb1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9D5L7", "url": "https://www.uniprot.org/uniprotkb/Q9D5L7" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.26032413", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": 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Chem.", "date": "2001", "authors": "Zentner M D, Lin H H, Deng H T, Kim K J, Shih H M, Ann D K", "reference": { "type": "PubMed", "id": "11390395", "url": "https://pubmed.ncbi.nlm.nih.gov/11390395" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O54714-1", "protein_name": "E3 SUMO-protein ligase PIAS3", "gene_name": "Pias3", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "O54714", "url": "https://www.uniprot.org/uniprotkb/O54714" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.11390395", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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"database": "UniProtKB", "id": "Q8CBD1", "url": "https://www.uniprot.org/uniprotkb/Q8CBD1" }, { "database": "PubMed", "id": "15846843", "url": "https://pubmed.ncbi.nlm.nih.gov/15846843" }, { "database": "iPTMnet", "id": "Q8CBD1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q8CBD1" } ], "site_lbl": "Ser531", "uniprot_canonical_ac": "Q8CBD1-1" }, { "start_pos": 543, "end_pos": 543, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "Phosphoserine", "evidence": [ { "database": "UniProtKB", "id": "Q8CBD1", "url": "https://www.uniprot.org/uniprotkb/Q8CBD1" }, { "database": "PubMed", "id": "15846843", "url": "https://pubmed.ncbi.nlm.nih.gov/15846843" }, { "database": "iPTMnet", "id": "Q8CBD1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q8CBD1" } ], "site_lbl": "Ser543", "uniprot_canonical_ac": "Q8CBD1-1" }, { "start_pos": 672, "end_pos": 672, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "Phosphoserine", "evidence": [ { "database": "UniProtKB", "id": "Q8CBD1", "url": "https://www.uniprot.org/uniprotkb/Q8CBD1" }, { "database": "PubMed", "id": "15846843", "url": "https://pubmed.ncbi.nlm.nih.gov/15846843" }, { "database": "iPTMnet", "id": "Q8CBD1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q8CBD1" } ], "site_lbl": "Ser672", "uniprot_canonical_ac": "Q8CBD1-1" } ], "record_id": "pubmed.15846843", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 10 }, { "field": "total_sites", "count": 10 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Post-translational modification of nuclear co-repressor receptor-interacting protein 140 by acetylation.", "journal": "Molecular & cellular proteomics : MCP", "date": "2005", "authors": "Huq MD, Wei LN", "reference": { "type": "PubMed", "id": "15879431", "url": "https://pubmed.ncbi.nlm.nih.gov/15879431" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8CBD1-1", "protein_name": "Nuclear receptor-interacting protein 1", "gene_name": "Nrip1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8CBD1", "url": "https://www.uniprot.org/uniprotkb/Q8CBD1" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.15879431", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Multiple signaling defects in the absence of RIP140 impair both cumulus expansion and follicle rupture.", "journal": "Endocrinology", "date": "2005-09", "authors": "Tullet Jennifer M A, Pocock Victoria, Steel Jennifer H, White Roger, Milligan Stuart, Parker Malcolm G", "reference": { "type": "PubMed", "id": "15919748", "url": "https://pubmed.ncbi.nlm.nih.gov/15919748" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8CBD1-1", "protein_name": "Nuclear receptor-interacting protein 1", "gene_name": "Nrip1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8CBD1", "url": "https://www.uniprot.org/uniprotkb/Q8CBD1" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.15919748", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Retinoic acid-stimulated sequential phosphorylation, PML recruitment, and SUMOylation of nuclear receptor TR2 to suppress Oct4 expression.", "journal": "Proc. Natl. Acad. Sci. U.S.A.", "date": "2008", "authors": "Gupta P, Ho PC, Huq MM, Ha SG, Park SW, Khan AA, Tsai NP, Wei LN", "reference": { "type": "PubMed", "id": "18682553", "url": "https://pubmed.ncbi.nlm.nih.gov/18682553" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8CBD1-1", "protein_name": "Nuclear receptor-interacting protein 1", "gene_name": "Nrip1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q505F1-1", "protein_name": "Nuclear receptor subfamily 2 group C member 1", "gene_name": "Nr2c1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9JHD1-1", "protein_name": "Histone acetyltransferase KAT2B", "gene_name": "Kat2b", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8CBD1", "url": "https://www.uniprot.org/uniprotkb/Q8CBD1" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 170, "end_pos": 170, "sequence_org": "S", "sequence_mut": "A", "comment": "No effect on sumoylation nor on DNA-binding and little effect on binding KAT2B. Greatly reduced DNA-binding, binding to KAT2B and activation of the RARB promoter; when associated with A-185.", "evidence": [ { "database": "UniProtKB", "id": "Q505F1", "url": "https://www.uniprot.org/uniprotkb/Q505F1" }, { "database": "PubMed", "id": "18682553", "url": "https://pubmed.ncbi.nlm.nih.gov/18682553" }, { "database": "PubMed", "id": "16317770", "url": "https://pubmed.ncbi.nlm.nih.gov/16317770" } ], "uniprot_canonical_ac": "Q505F1-1" }, { "start_pos": 185, "end_pos": 185, "sequence_org": "S", "sequence_mut": "A", "comment": "No effect on sumoylation and little effect on binding KAT2B. Some reduced DNA-binding. Greatly reduced DNA-binding, binding to KAT2B and activation of the RARB promoter; when associated with A-170.", "evidence": [ { "database": "UniProtKB", "id": "Q505F1", "url": "https://www.uniprot.org/uniprotkb/Q505F1" }, { "database": "PubMed", "id": "18682553", "url": "https://pubmed.ncbi.nlm.nih.gov/18682553" }, { "database": "PubMed", "id": "16317770", "url": "https://pubmed.ncbi.nlm.nih.gov/16317770" } ], "uniprot_canonical_ac": "Q505F1-1" }, { "start_pos": 203, "end_pos": 203, "sequence_org": "S", "sequence_mut": "A", "comment": "No effect on sumoylation.", "evidence": [ { "database": "UniProtKB", "id": "Q505F1", "url": "https://www.uniprot.org/uniprotkb/Q505F1" }, { "database": "PubMed", "id": "18682553", "url": "https://pubmed.ncbi.nlm.nih.gov/18682553" } ], "uniprot_canonical_ac": "Q505F1-1" }, { "start_pos": 208, "end_pos": 208, "sequence_org": "T", "sequence_mut": "A", "comment": "No effect on sumoylation.", "evidence": [ { "database": "UniProtKB", "id": "Q505F1", "url": "https://www.uniprot.org/uniprotkb/Q505F1" }, { "database": "PubMed", "id": "18682553", "url": "https://pubmed.ncbi.nlm.nih.gov/18682553" } ], "uniprot_canonical_ac": "Q505F1-1" }, { "start_pos": 210, "end_pos": 210, "sequence_org": "T", "sequence_mut": "A", "comment": "Abolishes sumoylation. No repression of OCT4 gene expression with or without retinoic acid and enhanced interaction with KAT2B and HDAC3. Abolishes interaction with HDAC3 and PML association; when associated with R-238.", "evidence": [ { "database": "UniProtKB", "id": "Q505F1", "url": "https://www.uniprot.org/uniprotkb/Q505F1" }, { "database": "PubMed", "id": "18682553", "url": "https://pubmed.ncbi.nlm.nih.gov/18682553" } ], "uniprot_canonical_ac": "Q505F1-1" }, { "start_pos": 210, "end_pos": 210, "sequence_org": "T", "sequence_mut": "E", "comment": "Sumoylated. Repressed OCT4 gene expression. Enhanced interaction with KAT2B; when associated with R-238.", "evidence": [ { "database": "UniProtKB", "id": "Q505F1", "url": "https://www.uniprot.org/uniprotkb/Q505F1" }, { "database": "PubMed", "id": "18682553", "url": "https://pubmed.ncbi.nlm.nih.gov/18682553" } ], "uniprot_canonical_ac": "Q505F1-1" }, { "start_pos": 238, "end_pos": 238, "sequence_org": "K", "sequence_mut": "A", "comment": "Abolishes sumoylation. Strongly associated with PML nuclear bodies. No effect on activation of OCT4 but activation not suppressed by additional SUMO1. Increased binding to KAT2B and reduced binding to NRIP1. Abolishes PML association; when associated with A-210.", "evidence": [ { "database": "UniProtKB", "id": "Q505F1", "url": "https://www.uniprot.org/uniprotkb/Q505F1" }, { "database": "PubMed", "id": "18682553", "url": "https://pubmed.ncbi.nlm.nih.gov/18682553" }, { "database": "PubMed", "id": "17187077", "url": "https://pubmed.ncbi.nlm.nih.gov/17187077" } ], "uniprot_canonical_ac": "Q505F1-1" }, { "start_pos": 238, "end_pos": 238, "sequence_org": "K", "sequence_mut": "R", "comment": "Abolishes sumoylation. No effect on activation of OCT4 but activation not suppressed by additional SUMO1. Enhanced interaction with KAT2B; when associated with A-210 or E-210.", "evidence": [ { "database": "UniProtKB", "id": "Q505F1", "url": "https://www.uniprot.org/uniprotkb/Q505F1" }, { "database": "PubMed", "id": "18682553", "url": "https://pubmed.ncbi.nlm.nih.gov/18682553" }, { "database": "PubMed", "id": "17187077", "url": "https://pubmed.ncbi.nlm.nih.gov/17187077" } ], "uniprot_canonical_ac": "Q505F1-1" }, { "start_pos": 461, "end_pos": 461, "sequence_org": "S", "sequence_mut": "A", "comment": "Little effect on PKC-stimulated protein stability nor on activation of RARB reporter.", "evidence": [ { "database": "UniProtKB", "id": "Q505F1", "url": "https://www.uniprot.org/uniprotkb/Q505F1" }, { "database": "PubMed", "id": "18682553", "url": "https://pubmed.ncbi.nlm.nih.gov/18682553" } ], "uniprot_canonical_ac": "Q505F1-1" }, { "start_pos": 461, "end_pos": 461, "sequence_org": "S", "sequence_mut": "A", "comment": "No effect on sumoylation.", "evidence": [ { "database": "UniProtKB", "id": 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octanoyltransferase and molecular determinants of substrate selectivity.", "journal": "The Journal of biological chemistry", "date": "2005", "authors": "Jogl G, Hsiao YS, Tong L", "reference": { "type": "PubMed", "id": "15492013", "url": "https://pubmed.ncbi.nlm.nih.gov/15492013" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9DC50-1", "protein_name": "Peroxisomal carnitine O-octanoyltransferase", "gene_name": "Crot", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9DC50", "url": "https://www.uniprot.org/uniprotkb/Q9DC50" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 323, "end_pos": 323, "sequence_org": "C", "sequence_mut": "M", "comment": "Increases activity with octanoyl-CoA.", "evidence": [ { "database": "UniProtKB", "id": "Q9DC50", "url": "https://www.uniprot.org/uniprotkb/Q9DC50" 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