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Biol.", "date": "1999", "authors": "Saiardi A, Erdjument-Bromage H, Snowman AM, Tempst P, Snyder SH", "reference": { "type": "PubMed", "id": "10574768", "url": "https://pubmed.ncbi.nlm.nih.gov/10574768" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q80V72-1", "protein_name": "Inositol hexakisphosphate kinase 2", "gene_name": "Ip6k2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q6PD10-1", "protein_name": "Inositol hexakisphosphate kinase 1", "gene_name": "Ip6k1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9UHH9-1", "protein_name": "Inositol hexakisphosphate kinase 2", "gene_name": "IP6K2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12494-1", "protein_name": "Inositol hexakisphosphate kinase 1", "gene_name": "KCS1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P07250-1", "protein_name": "Inositol polyphosphate multikinase", "gene_name": "ARG82", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Mus musculus", 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Signal.", "date": "2003", "authors": "Tu Zheng, Mooney Sharon M, Lee Frank S", "reference": { "type": "PubMed", "id": "12401521", "url": "https://pubmed.ncbi.nlm.nih.gov/12401521" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P47809-1", "protein_name": "Dual specificity mitogen-activated protein kinase kinase 4", "gene_name": "Map2k4", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P47809", "url": "https://www.uniprot.org/uniprotkb/P47809" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.12401521", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { 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Cell. 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Res.", "date": "2009", "authors": "Liu Wei, Zi Min, Jin Jiawei, Prehar Sukhpal, Oceandy Delvac, Kimura Tomomi E, Lei Ming, Neyses Ludwig, Weston Arthur H, Cartwright Elizabeth J, Wang Xin", "reference": { "type": "PubMed", "id": "19265040", "url": "https://pubmed.ncbi.nlm.nih.gov/19265040" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P47809-1", "protein_name": "Dual specificity mitogen-activated protein kinase kinase 4", "gene_name": "Map2k4", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P47809", "url": "https://www.uniprot.org/uniprotkb/P47809" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.19265040", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Diverse physiological functions of MKK4 and MKK7 during early embryogenesis.", "journal": "J. Biochem.", "date": "2010", "authors": "Asaoka Yoichi, Nishina Hiroshi", "reference": { "type": "PubMed", "id": "20801953", "url": "https://pubmed.ncbi.nlm.nih.gov/20801953" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P47809-1", "protein_name": "Dual specificity mitogen-activated protein kinase kinase 4", "gene_name": "Map2k4", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O14733-1", "protein_name": "Dual specificity mitogen-activated protein kinase kinase 7", "gene_name": "MAP2K7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45985-1", "protein_name": "Dual specificity mitogen-activated protein kinase kinase 4", "gene_name": "MAP2K4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8CE90-1", "protein_name": "Dual specificity mitogen-activated protein kinase kinase 7", "gene_name": "Map2k7", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q4KSH7-1", "protein_name": "Dual specificity mitogen-activated protein kinase kinase 7", "gene_name": "Map2k7", "tax_name": "Rat" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P47809", "url": "https://www.uniprot.org/uniprotkb/P47809" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.20801953", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The bottleneck of JNK signaling: molecular and functional characteristics of MKK4 and MKK7.", "journal": "Eur. J. Cell Biol.", "date": "2011", "authors": "Haeusgen Wiebke, Herdegen Thomas, Waetzig Vicki", "reference": { "type": "PubMed", "id": "21333379", "url": "https://pubmed.ncbi.nlm.nih.gov/21333379" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P47809-1", "protein_name": "Dual specificity mitogen-activated protein kinase kinase 4", "gene_name": "Map2k4", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O14733-1", "protein_name": "Dual specificity mitogen-activated protein kinase kinase 7", "gene_name": "MAP2K7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45985-1", "protein_name": "Dual specificity mitogen-activated protein kinase kinase 4", "gene_name": "MAP2K4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8CE90-1", "protein_name": "Dual specificity mitogen-activated protein kinase kinase 7", "gene_name": "Map2k7", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q4KSH7-1", "protein_name": "Dual specificity mitogen-activated protein kinase 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"field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The role of MKK4 in T-cell development and immunity to viral infections.", "journal": "Immunology and cell biology", "date": "2021", "authors": "Preston SP, Doerflinger M, Scott HW, Allison CC, Horton M, Cooney J, Pellegrini M", "reference": { "type": "PubMed", "id": "33175451", "url": "https://pubmed.ncbi.nlm.nih.gov/33175451" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P47809-1", "protein_name": "Dual specificity mitogen-activated protein kinase kinase 4", "gene_name": "Map2k4", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P47809", "url": "https://www.uniprot.org/uniprotkb/P47809" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.33175451", "abstract": "", 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high level of KLF12 causes folic acid-resistant neural tube defects by activating the Shh signaling pathway in micedagger.", "journal": "Biology of reproduction", "date": "2021", "authors": "Liu Y, Yuan Q, Wang Z, Ding L, Kong N, Liu J, Hu Y, Zhang Y, Li C, Yan G, Jiang Y, Sun H", "reference": { "type": "PubMed", "id": "34104947", "url": "https://pubmed.ncbi.nlm.nih.gov/34104947" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O35738-1", "protein_name": "Krueppel-like factor 12", "gene_name": "Klf12", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "O35738", "url": "https://www.uniprot.org/uniprotkb/O35738" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.34104947", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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Cell Genet.", "date": "2001", "authors": "Resch K, Jockusch H, Schmitt-John T", "reference": { "type": "PubMed", "id": "11306823", "url": "https://pubmed.ncbi.nlm.nih.gov/11306823" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8BST6-1", "protein_name": "E3 ubiquitin-protein ligase pellino homolog 2", "gene_name": "Peli2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q96FA3-1", "protein_name": "E3 ubiquitin-protein ligase pellino homolog 1", "gene_name": "PELI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAT8-1", "protein_name": "E3 ubiquitin-protein ligase pellino homolog 2", "gene_name": "PELI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8C669-1", "protein_name": "E3 ubiquitin-protein ligase pellino homolog 1", "gene_name": "Peli1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8BST6", "url": "https://www.uniprot.org/uniprotkb/Q8BST6" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.11306823", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", 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"glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Cutting edge: mouse pellino-2 modulates IL-1 and lipopolysaccharide signaling.", "journal": "Journal of immunology (Baltimore, Md. : 1950)", "date": "2002", "authors": "Yu KY, Kwon HJ, Norman DA, Vig E, Goebl MG, Harrington MA", "reference": { "type": "PubMed", "id": "12370331", "url": "https://pubmed.ncbi.nlm.nih.gov/12370331" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8BST6-1", "protein_name": "E3 ubiquitin-protein ligase pellino homolog 2", "gene_name": "Peli2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q62406-1", "protein_name": "Interleukin-1 receptor-associated kinase 1", "gene_name": "Irak1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8BST6", "url": "https://www.uniprot.org/uniprotkb/Q8BST6" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.12370331", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "BCL10 mediates lipopolysaccharide/toll-like receptor-4 signaling through interaction with Pellino2.", "journal": "J. Biol. Chem.", "date": "2004", "authors": "Liu Yingle, Dong Wei, Chen Lu, Xiang Rong, Xiao Huazhong, De Gejing, Wang Zhimin, Qi Yipeng", "reference": { "type": "PubMed", "id": "15213237", "url": "https://pubmed.ncbi.nlm.nih.gov/15213237" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8BST6-1", "protein_name": "E3 ubiquitin-protein ligase pellino homolog 2", "gene_name": "Peli2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9Z0H7-1", "protein_name": "B-cell lymphoma/leukemia 10", "gene_name": "Bcl10", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O35718-1", "protein_name": "Suppressor of cytokine signaling 3", "gene_name": "Socs3", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8BST6", "url": "https://www.uniprot.org/uniprotkb/Q8BST6" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.15213237", 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"n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Pellino 2 is critical for Toll-like receptor/interleukin-1 receptor (TLR/IL-1R)-mediated post-transcriptional control.", "journal": "The Journal of biological chemistry", "date": "2012", "authors": "Kim TW, Yu M, Zhou H, Cui W, Wang J, DiCorleto 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Biol. 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Chem.", "date": "2004", "authors": "Hardy MP, O'Neill LA", "reference": { "type": "PubMed", "id": "15082713", "url": "https://pubmed.ncbi.nlm.nih.gov/15082713" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8CFA1-1", "protein_name": "Interleukin-1 receptor-associated kinase-like 2", "gene_name": "Irak2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8CFA1", "url": "https://www.uniprot.org/uniprotkb/Q8CFA1" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.15082713", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "Surface translocation of pactolus is induced by cell activation and death, but is not required for neutrophil migration and function.", "journal": "J. Immunol.", "date": "2003", "authors": "Garrison S, Hojgaard A, Margraf R, Weis JJ, Weis JH", "reference": { "type": "PubMed", "id": "14662885", "url": "https://pubmed.ncbi.nlm.nih.gov/14662885" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q3UV74-1", "protein_name": "Integrin beta-2-like protein", "gene_name": "Itgb2l", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q3UV74", "url": "https://www.uniprot.org/uniprotkb/Q3UV74" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.14662885", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Altered localization of CXCL13 expressing cells in mice deficient in Pactolus following an inflammatory stimulus.", "journal": "Immunology", "date": "2006", "authors": "Hojgaard A, Close R, Dunn DM, Weiss RB, Weis JJ, Weis JH", "reference": { "type": "PubMed", "id": "16836649", "url": "https://pubmed.ncbi.nlm.nih.gov/16836649" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q3UV74-1", "protein_name": "Integrin beta-2-like protein", "gene_name": "Itgb2l", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q3UV74", "url": "https://www.uniprot.org/uniprotkb/Q3UV74" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.16836649", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], 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Biol. Chem.", "date": "1998", "authors": "Chen Y, Garrison S, Weis J J, Weis J H", "reference": { "type": "PubMed", "id": "9535848", "url": "https://pubmed.ncbi.nlm.nih.gov/9535848" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q3UV74-1", "protein_name": "Integrin beta-2-like protein", "gene_name": "Itgb2l", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q3UV74", "url": "https://www.uniprot.org/uniprotkb/Q3UV74" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.9535848", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Tom1, a VHS domain-containing protein, interacts with tollip, ubiquitin, and clathrin.", "journal": "The Journal of biological chemistry", "date": "2003", "authors": "Yamakami M, Yoshimori T, Yokosawa H", "reference": { "type": "PubMed", "id": "14563850", "url": "https://pubmed.ncbi.nlm.nih.gov/14563850" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9QZ06-1", "protein_name": "Toll-interacting protein", "gene_name": "Tollip", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O88746-1", "protein_name": "Target of Myb1 membrane trafficking protein", "gene_name": "Tom1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O60784-1", "protein_name": "Target of Myb1 membrane trafficking protein", "gene_name": "TOM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0E2-1", "protein_name": "Toll-interacting protein", "gene_name": "TOLLIP", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9QZ06", "url": "https://www.uniprot.org/uniprotkb/Q9QZ06" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 321, "end_pos": 325, "sequence_org": "DLIDM", "sequence_mut": "", "comment": "Fails to interact with clathrin heavy chain. 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0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Human Type 1 Iodothyronine Deiodinase (DIO1) Mutations Cause Abnormal Thyroid Hormone Metabolism.", "journal": "Thyroid : official journal of the American Thyroid Association", "date": "2021", "authors": "Franca MM, German A, Fernandes GW, Liao XH, Bianco AC, Refetoff S, Dumitrescu AM", "reference": { "type": "PubMed", "id": "32718224", "url": "https://pubmed.ncbi.nlm.nih.gov/32718224" }, "referenced_glycans": [], 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structural and functional differences in the dio1 gene in mice with inherited type 1 deiodinase deficiency.", "journal": "Mol. Endocrinol.", "date": "1995", "authors": "Maia AL, Berry MJ, Sabbag R, Harney JW, Larsen PR", "reference": { "type": "PubMed", "id": "7476994", "url": "https://pubmed.ncbi.nlm.nih.gov/7476994" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q61153-1", "protein_name": "Type I iodothyronine deiodinase", "gene_name": "Dio1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q61153", "url": "https://www.uniprot.org/uniprotkb/Q61153" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.7476994", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Cloning and characterization of the mouse interleukin enhancer binding factor 3 (Ilf3) homolog in a screen for RNA binding proteins.", "journal": "Mamm. Genome", "date": "1999", "authors": "Buaas F W, Lee K, Edelhoff S, Disteche C, Braun R E", "reference": { "type": "PubMed", "id": "10337617", "url": "https://pubmed.ncbi.nlm.nih.gov/10337617" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Z1X4-1", "protein_name": "Interleukin enhancer-binding factor 3", "gene_name": "Ilf3", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9Z1X4", "url": "https://www.uniprot.org/uniprotkb/Q9Z1X4" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.10337617", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Characterization of two evolutionarily conserved, alternatively spliced nuclear phosphoproteins, NFAR-1 and -2, that function in mRNA processing and interact with the double-stranded RNA-dependent protein kinase, PKR.", "journal": "The Journal of biological chemistry", "date": "2001", "authors": "Saunders LR, Perkins DJ, Balachandran S, Michaels R, Ford R, Mayeda A, Barber GN", "reference": { "type": "PubMed", "id": "11438536", "url": "https://pubmed.ncbi.nlm.nih.gov/11438536" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Z1X4-1", "protein_name": "Interleukin enhancer-binding factor 3", "gene_name": "Ilf3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q12906-1", "protein_name": "Interleukin enhancer-binding factor 3", "gene_name": "ILF3", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9Z1X4", "url": "https://www.uniprot.org/uniprotkb/Q9Z1X4" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.11438536", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Ilf3 and NF90 associate with the axonal targeting element of Tau mRNA.", "journal": "FASEB J.", "date": "2004", "authors": "Larcher Jean-Christophe, Gasmi Laila, Virana\u00efcken Wildriss, Edd\u00e9 Bernard, Bernard Rozenn, Ginzburg Irith, Denoulet Philippe", "reference": { "type": "PubMed", "id": "15364895", "url": "https://pubmed.ncbi.nlm.nih.gov/15364895" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Z1X4-1", "protein_name": "Interleukin enhancer-binding factor 3", "gene_name": "Ilf3", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9Z1X4", "url": "https://www.uniprot.org/uniprotkb/Q9Z1X4" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.15364895", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Phosphorylation of the NFAR proteins by the dsRNA-dependent protein kinase PKR constitutes a novel mechanism of translational regulation and cellular defense.", "journal": "Genes & development", "date": "2010", "authors": "Harashima A, Guettouche T, Barber GN", "reference": { "type": "PubMed", "id": "21123651", "url": "https://pubmed.ncbi.nlm.nih.gov/21123651" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Z1X4-1", "protein_name": "Interleukin enhancer-binding factor 3", "gene_name": "Ilf3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O75569-1", "protein_name": "Interferon-inducible double-stranded RNA-dependent protein kinase activator A", "gene_name": "PRKRA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4X5-1", "protein_name": "E3 ubiquitin-protein ligase ARIH1", "gene_name": "ARIH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15633-1", "protein_name": "RISC-loading complex subunit TARBP2", "gene_name": "TARBP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15111-1", "protein_name": "Inhibitor of nuclear factor kappa-B kinase subunit alpha", "gene_name": "CHUK", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14933-1", "protein_name": "Ubiquitin/ISG15-conjugating enzyme E2 L6", "gene_name": "UBE2L6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PEY2-1", "protein_name": "Tubulin alpha-3E chain", "gene_name": "TUBA3E", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52564-1", "protein_name": "Dual specificity mitogen-activated protein kinase kinase 6", "gene_name": "MAP2K6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12905-1", "protein_name": "Interleukin enhancer-binding factor 2", "gene_name": "ILF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N2Z9-1", "protein_name": "Centromere protein S", "gene_name": "CENPS-CORT; CENPS", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8MT69-1", "protein_name": "Centromere protein X", "gene_name": "CENPX", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14920-1", "protein_name": "Inhibitor of nuclear factor kappa-B kinase subunit beta", "gene_name": "IKBKB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62714-1", "protein_name": "Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform", "gene_name": "PPP2CB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14258-1", "protein_name": "E3 ubiquitin/ISG15 ligase TRIM25", "gene_name": "TRIM25", "tax_name": "Human" }, { "uniprot_canonical_ac": "P34931-1", "protein_name": "Heat shock 70 kDa protein 1-like", "gene_name": "HSPA1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54652-1", "protein_name": "Heat shock-related 70 kDa protein 2", "gene_name": "HSPA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20042-1", "protein_name": "Eukaryotic translation initiation factor 2 subunit 2", "gene_name": "EIF2S2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06493-1", "protein_name": "Cyclin-dependent kinase 1", "gene_name": "CDK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NYA1-1", "protein_name": "Sphingosine kinase 1", "gene_name": "SPHK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NNZ2-1", "protein_name": "Tubulin beta 8B", "gene_name": "TUBB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3ZCM7-1", "protein_name": "Tubulin beta-8 chain", "gene_name": "TUBB8", "tax_name": "Human" }, { 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Biol. Chem.", "date": "1994", "authors": "Kao PN, Chen L, Brock G, Ng J, Kenny J, Smith AJ, Corthesy B", "reference": { "type": "PubMed", "id": "7519613", "url": "https://pubmed.ncbi.nlm.nih.gov/7519613" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Z1X4-1", "protein_name": "Interleukin enhancer-binding factor 3", "gene_name": "Ilf3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9CXY6-1", "protein_name": "Interleukin enhancer-binding factor 2", "gene_name": "Ilf2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q12905-1", "protein_name": "Interleukin enhancer-binding factor 2", "gene_name": "ILF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12906-1", "protein_name": "Interleukin enhancer-binding factor 3", "gene_name": "ILF3", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9Z1X4", "url": "https://www.uniprot.org/uniprotkb/Q9Z1X4" } ], "common_name": "Mouse", 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systemic carnitine deficiency.", "journal": "Life sciences", "date": "1999", "authors": "Jalil A, Horiuchi M, Nomoto M, Kobayashi K, Saheki T", "reference": { "type": "PubMed", "id": "10210276", "url": "https://pubmed.ncbi.nlm.nih.gov/10210276" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O35594-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "Ift81", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "O35594", "url": "https://www.uniprot.org/uniprotkb/O35594" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.10210276", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Genomic organization and mapping of mouse CDV (carnitine deficiency-associated gene expressed in ventricle)-1 and its related CDV-1R gene.", "journal": "Mamm. Genome", "date": "2000", "authors": "Higashi M, Kobayashi K, Iijima M, Wakana S, Horiuchi M, Yasuda T, Yoshida G, Kanmura Y, Saheki T", "reference": { "type": "PubMed", "id": "11130971", "url": "https://pubmed.ncbi.nlm.nih.gov/11130971" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O35594-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "Ift81", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8WYA0-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "IFT81", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "O35594", "url": "https://www.uniprot.org/uniprotkb/O35594" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.11130971", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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Cell physiology", "date": "2020", "authors": "Qu W, Yuan S, Quan C, Huang Q, Zhou Q, Yap Y, Shi L, Zhang D, Guest T, Li W, Yee SP, Zhang L, Cazin C, Hess RA, Ray PF, Kherraf ZE, Zhang Z", "reference": { "type": "PubMed", "id": "32233951", "url": "https://pubmed.ncbi.nlm.nih.gov/32233951" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O35594-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "Ift81", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "O35594", "url": "https://www.uniprot.org/uniprotkb/O35594" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.32233951", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A silencing pathway to induce H3-K9 and H4-K20 trimethylation at constitutive heterochromatin.", "journal": "Genes & development", "date": "2004", "authors": "Schotta G, Lachner M, Sarma K, Ebert A, Sengupta R, Reuter G, Reinberg D, Jenuwein T", "reference": { "type": "PubMed", "id": "15145825", "url": "https://pubmed.ncbi.nlm.nih.gov/15145825" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q3U8K7-1", "protein_name": "Histone-lysine N-methyltransferase KMT5B", "gene_name": 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"KMT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15291-1", "protein_name": "Retinoblastoma-binding protein 5", "gene_name": "RBBP5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96L73-1", "protein_name": "Histone-lysine N-methyltransferase, H3 lysine-36 specific", "gene_name": "NSD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19838-1", "protein_name": "Nuclear factor NF-kappa-B p105 subunit", "gene_name": "NFKB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9W5E0-1", "protein_name": "Histone-lysine N-methyltransferase Suv4-20", "gene_name": "Hmt4-20", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P83917-1", "protein_name": "Chromobox protein homolog 1", "gene_name": "Cbx1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q61686-1", "protein_name": "Chromobox protein homolog 5", "gene_name": "Cbx5", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q16576-1", "protein_name": "Histone-binding protein RBBP7", "gene_name": "RBBP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAZ2-1", "protein_name": "Histone-lysine N-methyltransferase PRDM16", "gene_name": "PRDM16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPS6-1", "protein_name": "Histone-lysine N-methyltransferase SETD1B", "gene_name": "SETD1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBK2-1", "protein_name": "N-lysine methyltransferase SETD6", "gene_name": "SETD6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75530-1", "protein_name": "Polycomb protein EED", "gene_name": "EED", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86TU7-1", "protein_name": "Actin-histidine N-methyltransferase", "gene_name": "SETD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7B4-1", "protein_name": "Histone-lysine N-methyltransferase SMYD3", "gene_name": "SMYD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15910-1", "protein_name": "Histone-lysine N-methyltransferase EZH2", "gene_name": "EZH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BZ95-1", "protein_name": "Histone-lysine N-methyltransferase NSD3", "gene_name": "NSD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H5I1-1", "protein_name": "Histone-lysine N-methyltransferase SUV39H2", "gene_name": "SUV39H2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96KQ7-1", "protein_name": "Histone-lysine N-methyltransferase EHMT2", "gene_name": "EHMT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6VMQ6-1", "protein_name": "Activating transcription factor 7-interacting protein 1", "gene_name": "ATF7IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR48-1", "protein_name": "Histone-lysine N-methyltransferase ASH1L", "gene_name": "ASH1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43463-1", "protein_name": "Histone-lysine N-methyltransferase SUV39H1", "gene_name": "SUV39H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09028-1", "protein_name": "Histone-binding protein RBBP4", "gene_name": "RBBP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00653-1", "protein_name": "Nuclear factor NF-kappa-B p100 subunit", "gene_name": "NFKB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBL3-1", "protein_name": "Set1/Ash2 histone methyltransferase complex subunit ASH2", "gene_name": "ASH2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9C005-1", "protein_name": "Protein dpy-30 homolog", "gene_name": "DPY30", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61964-1", "protein_name": "WD repeat-containing protein 5", "gene_name": "WDR5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone H3.1", "gene_name": "H3C10; H3C11; H3C12; H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O96028-1", "protein_name": "Histone-lysine N-methyltransferase NSD2", "gene_name": "NSD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14686-1", "protein_name": "Histone-lysine N-methyltransferase 2D", "gene_name": "KMT2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q03164-1", "protein_name": "Histone-lysine N-methyltransferase 2A", "gene_name": "KMT2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96T68-1", "protein_name": "Histone-lysine N-methyltransferase SETDB2", "gene_name": "SETDB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62806-1", "protein_name": "Histone H4", "gene_name": "H4c11; H4c12; H4c14; H4c16; H4c1; H4c2; H4c3; H4c4; H4c6; H4c8; H4c9; Hist1h4m", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q03112-7", "protein_name": "Histone-lysine N-methyltransferase MECOM", "gene_name": "MECOM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9B1-1", "protein_name": "Histone-lysine N-methyltransferase EHMT1", "gene_name": "EHMT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQR1-1", "protein_name": "N-lysine methyltransferase KMT5A", "gene_name": "KMT5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4FZB7-1", "protein_name": "Histone-lysine N-methyltransferase KMT5B", "gene_name": "KMT5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRG4-1", "protein_name": "N-lysine methyltransferase SMYD2", "gene_name": "SMYD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQV7-1", "protein_name": "Histone-lysine N-methyltransferase PRDM9", "gene_name": "PRDM9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BYW2-1", "protein_name": "Histone-lysine N-methyltransferase SETD2", "gene_name": "SETD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23198-1", "protein_name": "Chromobox protein homolog 3", "gene_name": "Cbx3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q86Y97-1", "protein_name": "Histone-lysine N-methyltransferase KMT5C", "gene_name": "KMT5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WTS6-1", "protein_name": "Histone-lysine N-methyltransferase SETD7", "gene_name": "SETD7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15022-1", "protein_name": "Polycomb protein SUZ12", "gene_name": "SUZ12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q04206-1", "protein_name": "Transcription factor p65", "gene_name": "RELA", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q3U8K7", "url": "https://www.uniprot.org/uniprotkb/Q3U8K7" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.15145825", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 53 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Role of the RB1 family in stabilizing histone methylation at constitutive heterochromatin.", "journal": "Nature cell biology", "date": "2005", "authors": "Gonzalo S, Garcia-Cao M, Fraga MF, Schotta G, Peters AH, Cotter SE, Eguia R, Dean DC, Esteller M, Jenuwein T, Blasco MA", "reference": { "type": "PubMed", "id": "15750587", "url": "https://pubmed.ncbi.nlm.nih.gov/15750587" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q3U8K7-1", "protein_name": "Histone-lysine N-methyltransferase KMT5B", "gene_name": "Kmt5b", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q6Q783-1", "protein_name": "Histone-lysine N-methyltransferase KMT5C", "gene_name": "Kmt5c", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P06400-1", "protein_name": "Retinoblastoma-associated protein", "gene_name": "RB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13405-1", "protein_name": "Retinoblastoma-associated protein", "gene_name": "Rb1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q64701-1", "protein_name": "Retinoblastoma-like protein 1", "gene_name": "Rbl1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P53350-1", "protein_name": "Serine/threonine-protein kinase PLK1", "gene_name": "PLK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P84243-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A; H3-3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06493-1", "protein_name": "Cyclin-dependent kinase 1", "gene_name": "CDK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42695-1", "protein_name": "Condensin-2 complex subunit D3", "gene_name": "NCAPD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IBW4-1", "protein_name": "Condensin-2 complex subunit H2", "gene_name": "NCAPH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16695-1", "protein_name": "Histone H3.1t", "gene_name": "H3-4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone H3.1", "gene_name": "H3C10; H3C11; H3C12; H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16778-1", "protein_name": "Histone H2B type 2-E", "gene_name": "H2BC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62807-1", "protein_name": "Histone H2B type 1-C/E/F/G/I", "gene_name": "H2BC10; H2BC4; H2BC6; H2BC7; H2BC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q64700-1", "protein_name": "Retinoblastoma-like protein 2", "gene_name": "Rbl2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O95347-1", "protein_name": "Structural maintenance of chromosomes protein 2", "gene_name": "SMC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NTJ3-1", "protein_name": "Structural maintenance of chromosomes protein 4", "gene_name": "SMC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86XI2-1", "protein_name": "Condensin-2 complex subunit G2", "gene_name": "NCAPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16104-1", "protein_name": "Histone H2AX", "gene_name": "H2AX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEM0-1", "protein_name": "Microcephalin", "gene_name": "MCPH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 1-O", "gene_name": "H2BC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQR1-1", "protein_name": "N-lysine methyltransferase KMT5A", "gene_name": "KMT5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C5Y9-1", "protein_name": "Histone H2A-Bbd type 1", "gene_name": "H2AB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "F8VPQ2-1", "protein_name": "AT-rich interactive domain-containing protein 4A", "gene_name": "Arid4a", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9BTM1-1", "protein_name": "Histone H2A.J", "gene_name": "H2AJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14635-1", "protein_name": "G2/mitotic-specific cyclin-B1", "gene_name": "CCNB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01105-1", "protein_name": "Protein SET", "gene_name": "SET", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71UI9-1", "protein_name": "Histone H2A.V", "gene_name": "H2AZ2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57053-1", "protein_name": "Histone H2B type F-S", "gene_name": "H2BC12L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", 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}, { "uniprot_canonical_ac": "Q4FZB7-1", "protein_name": "Histone-lysine N-methyltransferase KMT5B", "gene_name": "KMT5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86Y97-1", "protein_name": "Histone-lysine N-methyltransferase KMT5C", "gene_name": "KMT5C", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q3U8K7", "url": "https://www.uniprot.org/uniprotkb/Q3U8K7" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.28114273", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { 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Cigdem, Lippa Natalie, Andrews Marisa, Baldridge Dustin, Constantino John, van Haeringen Arie, Snoeck-Streef Irina, Chow Penny, Hing Anne, Graham John M, Au Margaret, Faivre Laurence, Shen Wei, Mao Rong, Palumbos Janice, Viskochil David, Gahl William, Tifft Cynthia, Macnamara Ellen, Hauser Natalie, Miller Rebecca, Maffeo Jessica, Afenjar Alexandra, Doummar Diane, Keren Boris, Arn Pamela, Macklin-Mantia Sarah, Meerschaut Ilse, Callewaert Bert, Reis Andr\u00e9, Zweier Christiane, Brewer Carole, Saggar Anand, Smeland Marie F, Kumar Ajith, Elmslie Frances, Deshpande Charu, Nizon Mathilde, Cogne Benjamin, van Ierland Yvette, Wilke Martina, van Slegtenhorst Marjon, Koudijs Suzanne, Chen Jin Yun, Dredge David, Pier Danielle, Wortmann Saskia, Kamsteeg Erik-Jan, Koch Johannes, Haynes Devon, Pollack Lynda, Titheradge Hannah, Ranguin Kara, Denomm\u00e9-Pichon Anne-Sophie, Weber Sacha, P\u00e9rez de la Fuente Rub\u00e9n, S\u00e1nchez Del Pozo Jaime, Lezana Rosales Jose Miguel, Joset Pascal, Steindl Katharina, Rauch Anita, Mei Davide, Mari Francesco, Guerrini Renzo, Lespinasse James, Tran Mau-Them Fr\u00e9d\u00e9ric, Philippe Christophe, Dauriat Benjamin, Raymond Laure, Moutton S\u00e9bastien, Cueto-Gonz\u00e1lez Anna M, Tan Tiong Yang, Mignot Cyril, Grotto Sarah, Renaldo Florence, Drivas Theodore G, Hennessy Laura, Raper Anna, Parenti Ilaria, Kaiser Frank J, Kuechler Alma, Busk \u00d8yvind L, Islam Lily, Siedlik Jacob A, Henderson Lindsay B, Juusola Jane, Person Richard, Schnur Rhonda E, Vitobello Antonio, Banka Siddharth, Bhoj Elizabeth J, Stessman Holly A F", "reference": { "type": "PubMed", "id": "36897941", "url": "https://pubmed.ncbi.nlm.nih.gov/36897941" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q3U8K7-1", "protein_name": "Histone-lysine N-methyltransferase KMT5B", "gene_name": "Kmt5b", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q4FZB7-1", "protein_name": "Histone-lysine N-methyltransferase KMT5B", "gene_name": "KMT5B", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q3U8K7", "url": "https://www.uniprot.org/uniprotkb/Q3U8K7" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.36897941", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { 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"total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Male-enhanced antigen-1 gene flanked by two overlapping genes is expressed in late spermatogenesis.", "journal": "Biol. Reprod.", "date": "2002", "authors": "Ohinata Y, Sutou S, Kondo M, Takahashi T, Mitsui Y", "reference": { "type": "PubMed", "id": "12444059", "url": "https://pubmed.ncbi.nlm.nih.gov/12444059" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8VEM9-1", "protein_name": "Kelch domain-containing protein 3", "gene_name": "Klhdc3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q64327-1", "protein_name": "Male-enhanced antigen 1", "gene_name": "Mea1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8VEM9", "url": "https://www.uniprot.org/uniprotkb/Q8VEM9" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.12444059", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": 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testes.", "journal": "The Journal of biological chemistry", "date": "2011", "authors": "Lee B, Park I, Jin S, Choi H, Kwon JT, Kim J, Jeong J, Cho BN, Eddy EM, Cho C", "reference": { "type": "PubMed", "id": "21705336", "url": "https://pubmed.ncbi.nlm.nih.gov/21705336" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8BMY7-1", "protein_name": "Serine protease inhibitor Kazal-type 2", "gene_name": "Spink2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8BMY7", "url": "https://www.uniprot.org/uniprotkb/Q8BMY7" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.21705336", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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