[ { "title": "The F-BAR domain protein PACSIN2 associates with Rac1 and regulates cell spreading and migration.", "journal": "Journal of cell science", "date": "2011-07-15", "authors": "de Kreuk Bart-Jan, Nethe Micha, Fernandez-Borja Mar, Anthony Eloise C, Hensbergen Paul J, Deelder Andre M, Plomann Markus, Hordijk Peter L", "reference": { "type": "PubMed", "id": "21693584", "url": "https://pubmed.ncbi.nlm.nih.gov/21693584" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UNF0-1", "protein_name": "Protein kinase C and casein kinase substrate in neurons protein 2", "gene_name": "PACSIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63000-1", "protein_name": "Ras-related C3 botulinum toxin substrate 1", "gene_name": "RAC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9WVE8-1", "protein_name": "Protein kinase C and casein kinase substrate in neurons protein 2", "gene_name": "Pacsin2", "tax_name": "Mouse" } ], "species": [ { "name": "Homo 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reveals role for clathrin-mediated endocytosis in development and function of T cells.", "journal": "Nat. Commun.", "date": "2020", "authors": "\u0141yszkiewicz Marcin, Zi\u0119tara Natalia, Frey Laura, Pannicke Ulrich, Stern Marcel, Liu Yanshan, Fan Yanxin, Pucha\u0142ka Jacek, Hollizeck Sebastian, Somekh Ido, Rohlfs Meino, Yilmaz Tu\u011fba, \u00dcnal Ekrem, Karakukcu Musa, Patiro\u011flu T\u00fcrkan, Kellerer Christina, Karasu Ebru, Sykora Karl-Walter, Lev Atar, Simon Amos, Somech Raz, Roesler Joachim, Hoenig Manfred, Keppler Oliver T, Schwarz Klaus, Klein Christoph", "reference": { "type": "PubMed", "id": "32312977", "url": "https://pubmed.ncbi.nlm.nih.gov/32312977" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O14526-1", "protein_name": "F-BAR domain only protein 1", "gene_name": "FCHO1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O14526", "url": "https://www.uniprot.org/uniprotkb/O14526" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo 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{ "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Inflammatory Bowel Disease and Guillain Barre Syndrome in FCHO1 Deficiency.", "journal": "Journal of clinical immunology", "date": "2021", "authors": "Aydemir S, Islek A, Nepesov S, Yaman Y, Baysoy G, Beser OF, Cokugras FC, Baris S, Karakoc-Aydiner E, Cokugras H, Hubrack SZ, Kendir Demirkol Y, Lo B, Kiykim A, Ozen A", "reference": { "type": "PubMed", "id": "33950325", "url": "https://pubmed.ncbi.nlm.nih.gov/33950325" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O14526-1", "protein_name": "F-BAR domain only protein 1", "gene_name": "FCHO1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O14526", "url": "https://www.uniprot.org/uniprotkb/O14526" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.33950325", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", 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"Functional recognition of 5' splice site by U4/U6.U5 tri-snRNP defines a novel ATP-dependent step in early spliceosome assembly.", "journal": "Mol. Cell", "date": "2000", "authors": "Maroney P A, Romfo C M, Nilsen T W", "reference": { "type": "PubMed", "id": "10983979", "url": "https://pubmed.ncbi.nlm.nih.gov/10983979" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q6P2Q9-1", "protein_name": "Pre-mRNA-processing-splicing factor 8", "gene_name": "PRPF8", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q6P2Q9", "url": "https://www.uniprot.org/uniprotkb/Q6P2Q9" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10983979", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A general approach for identification of RNA-protein cross-linking sites within native human spliceosomal small nuclear ribonucleoproteins (snRNPs). Analysis of RNA-protein contacts in native U1 and U4/U6.U5 snRNPs.", "journal": "J. Biol. Chem.", "date": "2000", "authors": "Urlaub H, Hartmuth K, Kostka S, Grelle G, L\u00fchrmann R", "reference": { "type": "PubMed", "id": "11006293", "url": "https://pubmed.ncbi.nlm.nih.gov/11006293" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q6P2Q9-1", "protein_name": "Pre-mRNA-processing-splicing factor 8", "gene_name": "PRPF8", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q6P2Q9", "url": "https://www.uniprot.org/uniprotkb/Q6P2Q9" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11006293", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { 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"count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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in the spliceosome: a potential homologue of the yeast PRP8 protein.", "journal": "Proc. Natl. Acad. Sci. U.S.A.", "date": "1990", "authors": "Garcia-Blanco MA, Anderson GJ, Beggs J, Sharp PA", "reference": { "type": "PubMed", "id": "2139226", "url": "https://pubmed.ncbi.nlm.nih.gov/2139226" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q6P2Q9-1", "protein_name": "Pre-mRNA-processing-splicing factor 8", "gene_name": "PRPF8", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q6P2Q9", "url": "https://www.uniprot.org/uniprotkb/Q6P2Q9" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.2139226", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The mammalian analogue of the yeast PRP8 splicing protein is present in the U4/5/6 small nuclear ribonucleoprotein particle and the spliceosome.", "journal": "Proc. 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"Crystallization and biochemical characterization of the human spliceosomal Aar2-Prp8(RNaseH) complex.", "journal": "Acta Crystallogr. 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Chem.", "date": "1996", "authors": "Hinz M, Moore M J, Bindereif A", "reference": { "type": "PubMed", "id": "8702566", "url": "https://pubmed.ncbi.nlm.nih.gov/8702566" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q6P2Q9-1", "protein_name": "Pre-mRNA-processing-splicing factor 8", "gene_name": "PRPF8", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q6P2Q9", "url": "https://www.uniprot.org/uniprotkb/Q6P2Q9" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8702566", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", 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properties of colorectal cancer cells via the mTOR signaling pathway.", "journal": "Cellular and molecular life sciences : CMLS", "date": "2023-06-20", "authors": "Garc\u00eda-Moreno Juan F, Lacerda Rafaela, da Costa Paulo J, Pereira Marcelo, Gama-Carvalho Margarida, Matos Paulo, Rom\u00e3o Lu\u00edsa", "reference": { "type": "PubMed", "id": "37340282", "url": "https://pubmed.ncbi.nlm.nih.gov/37340282" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8IYB7-1", "protein_name": "DIS3-like exonuclease 2", "gene_name": "DIS3L2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q8IYB7", "url": "https://www.uniprot.org/uniprotkb/Q8IYB7" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.37340282", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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Chem.", "date": "2005", "authors": "Girard M, Poupon V, Blondeau F, McPherson PS", "reference": { "type": "PubMed", "id": "16179350", "url": "https://pubmed.ncbi.nlm.nih.gov/16179350" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O75165-1", "protein_name": "DnaJ homolog subfamily C member 13", "gene_name": "DNAJC13", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O75165", "url": "https://www.uniprot.org/uniprotkb/O75165" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.16179350", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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Genet.", "date": "2016", "authors": "Deng HX, Shi Y, Yang Y, Ahmeti KB, Miller N, Huang C, Cheng L, Zhai H, Deng S, Nuytemans K, Corbett NJ, Kim MJ, Deng H, Tang B, Yang Z, Xu Y, Chan P, Huang B, Gao XP, Song Z, Liu Z, Fecto F, Siddique N, Foroud T, Jankovic J, Ghetti B, Nicholson DA, Krainc D, Melen O, Vance JM, Pericak-Vance MA, Ma YC, Rajput AH, Siddique T", "reference": { "type": "PubMed", "id": "27270108", "url": "https://pubmed.ncbi.nlm.nih.gov/27270108" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O75165-1", "protein_name": "DnaJ homolog subfamily C member 13", "gene_name": "DNAJC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5BJP5-1", "protein_name": "Transmembrane protein 230", "gene_name": "Tmem230", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q8CIB6-1", "protein_name": "Transmembrane protein 230", "gene_name": "Tmem230", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q96A57-1", "protein_name": "Transmembrane protein 230", 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differentiation of hematopoietic progenitor cells.", "journal": "Blood", "date": "2000", "authors": "Han W, Ye Q, Moore M A", "reference": { "type": "PubMed", "id": "10688816", "url": "https://pubmed.ncbi.nlm.nih.gov/10688816" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O00548-1", "protein_name": "Delta-like protein 1", "gene_name": "DLL1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O00548", "url": "https://www.uniprot.org/uniprotkb/O00548" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10688816", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, 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