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phospho-Cav-2 (pY19 and pY27).", "journal": "Biochemistry", "date": "2004", "authors": "Wang XB, Lee H, Capozza F, Marmon S, Sotgia F, Brooks JW, Campos-Gonzalez R, Lisanti MP", "reference": { "type": "PubMed", "id": "15504032", "url": "https://pubmed.ncbi.nlm.nih.gov/15504032" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q03135-1", "protein_name": "Caveolin-1", "gene_name": "CAV1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20936-1", "protein_name": "Ras GTPase-activating protein 1", "gene_name": "RASA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9WVC3-1", "protein_name": "Caveolin-2", "gene_name": "Cav2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P51636-1", "protein_name": "Caveolin-2", "gene_name": "CAV2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12931-1", "protein_name": "Proto-oncogene tyrosine-protein kinase Src", "gene_name": "SRC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16333-1", "protein_name": 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Completely eliminates Src-mediated tyrosine phosphorylation and binding to RASA1, SRC and NCK1; when associated with A-27.", "evidence": [ { "database": "UniProtKB", "id": "P51636", "url": "https://www.uniprot.org/uniprotkb/P51636" }, { "database": "PubMed", "id": "15504032", "url": "https://pubmed.ncbi.nlm.nih.gov/15504032" } ], "uniprot_canonical_ac": "P51636-1" }, { "start_pos": 27, "end_pos": 27, "sequence_org": "Y", "sequence_mut": "A", "comment": "Greatly reduced Src-mediated phosphorylation and binding of RASA1, SRC and NCK1. 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"BAIAP2L1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92608-1", "protein_name": "Dedicator of cytokinesis protein 2", "gene_name": "DOCK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H3Q1-1", "protein_name": "Cdc42 effector protein 4", "gene_name": "CDC42EP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14126-1", "protein_name": "Desmoglein-2", "gene_name": "DSG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NSV4-3", "protein_name": "Protein diaphanous homolog 3", "gene_name": "DIAPH3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86Y07-1", "protein_name": "Serine/threonine-protein kinase VRK2", "gene_name": "VRK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15080-1", "protein_name": "Neutrophil cytosol factor 4", "gene_name": "NCF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43121-1", "protein_name": "Cell surface glycoprotein MUC18", "gene_name": "MCAM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55160-1", "protein_name": "Nck-associated protein 1-like", "gene_name": "NCKAP1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15153-1", "protein_name": "Ras-related C3 botulinum toxin substrate 2", "gene_name": "RAC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WUW1-1", "protein_name": "Protein BRICK1", "gene_name": "BRK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNA1-1", "protein_name": "Rho GTPase-activating protein 26", "gene_name": "ARHGAP26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14739-1", "protein_name": "Delta(14)-sterol reductase LBR", "gene_name": "LBR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCU6-1", "protein_name": "Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein", "gene_name": "PREX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07960-1", "protein_name": "Rho GTPase-activating protein 1", "gene_name": "ARHGAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O96013-1", "protein_name": "Serine/threonine-protein kinase PAK 4", "gene_name": "PAK4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZD9-1", "protein_name": "Dedicator of cytokinesis protein 3", "gene_name": "DOCK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5T5U3-1", "protein_name": "Rho GTPase-activating protein 21", "gene_name": "ARHGAP21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19878-1", "protein_name": "Neutrophil cytosol factor 2", "gene_name": "NCF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2U8-1", "protein_name": "Inner nuclear membrane protein Man1", "gene_name": "LEMD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13505-1", "protein_name": "Metaxin-1", "gene_name": "MTX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RT1-1", "protein_name": "Erbin", "gene_name": "ERBIN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27986-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit alpha", "gene_name": "PIK3R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZP0-1", "protein_name": "Abl interactor 1", "gene_name": "ABI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "A7KAX9-1", "protein_name": "Rho GTPase-activating protein 32", "gene_name": "ARHGAP32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NYB9-1", "protein_name": "Abl interactor 2", "gene_name": "ABI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15498-1", "protein_name": "Proto-oncogene vav", "gene_name": "VAV1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q03135", "url": "https://www.uniprot.org/uniprotkb/Q03135" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15542837", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 88 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": 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"o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of a novel partner of duox: EFP1, a thioredoxin-related protein.", "journal": "The Journal of biological chemistry", "date": "2005", "authors": "Wang D, De Deken X, Milenkovic M, Song Y, Pirson I, Dumont JE, Miot F", "reference": { "type": "PubMed", "id": "15561711", "url": "https://pubmed.ncbi.nlm.nih.gov/15561711" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q03135-1", "protein_name": "Caveolin-1", "gene_name": "CAV1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q1HG43-1", "protein_name": "Dual oxidase maturation factor 1", "gene_name": "DUOXA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRD9-1", "protein_name": "Dual oxidase 1", "gene_name": "DUOX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q1HG44-1", "protein_name": "Dual oxidase maturation factor 2", "gene_name": "DUOXA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13498-1", "protein_name": "Cytochrome b-245 light chain", "gene_name": "CYBA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92911-1", "protein_name": "Sodium/iodide cotransporter", "gene_name": "SLC5A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01215-1", "protein_name": "Glycoprotein hormones alpha chain", "gene_name": "CGA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01222-1", "protein_name": "Thyrotropin subunit beta", "gene_name": "TSHB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07202-1", "protein_name": "Thyroid peroxidase", "gene_name": "TPO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PHW0-1", "protein_name": "Iodotyrosine deiodinase 1", "gene_name": "IYD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PKC3-1", "protein_name": "Thioredoxin domain-containing protein 11", "gene_name": "TXNDC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRD8-1", "protein_name": "Dual oxidase 2", "gene_name": "DUOX2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q03135", "url": "https://www.uniprot.org/uniprotkb/Q03135" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15561711", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 12 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Nitric oxide dioxygenase function and mechanism of flavohemoglobin, hemoglobin, myoglobin and their associated reductases.", "journal": "Journal of inorganic biochemistry", "date": "2005", "authors": "Gardner PR", "reference": { "type": "PubMed", "id": "15598505", "url": "https://pubmed.ncbi.nlm.nih.gov/15598505" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q03135-1", "protein_name": "Caveolin-1", "gene_name": "CAV1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60551-1", "protein_name": "Glycylpeptide N-tetradecanoyltransferase 2", "gene_name": "NMT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30419-1", "protein_name": "Glycylpeptide N-tetradecanoyltransferase 1", "gene_name": "NMT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DP23-1", "protein_name": "Calmodulin-1", "gene_name": "CALM1; CALM2; CALM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWM9-1", "protein_name": "Cytoglobin", "gene_name": "CYGB", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75608-1", "protein_name": "Acyl-protein thioesterase 1", "gene_name": "LYPLA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29474-1", "protein_name": "Nitric oxide synthase 3", "gene_name": "NOS3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07900-1", "protein_name": "Heat shock protein HSP 90-alpha", "gene_name": "HSP90AA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43169-1", "protein_name": "Cytochrome b5 type B", "gene_name": "CYB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IVQ6-1", "protein_name": "Palmitoyltransferase ZDHHC21", "gene_name": "ZDHHC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35270-1", "protein_name": "Sepiapterin reductase", "gene_name": "SPR", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94760-1", "protein_name": "N(G),N(G)-dimethylarginine dimethylaminohydrolase 1", "gene_name": "DDAH1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q03135", "url": "https://www.uniprot.org/uniprotkb/Q03135" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15598505", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 13 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { 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}, { "uniprot_canonical_ac": "Q8IZP0-1", "protein_name": "Abl interactor 1", "gene_name": "ABI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "A7KAX9-1", "protein_name": "Rho GTPase-activating protein 32", "gene_name": "ARHGAP32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NYB9-1", "protein_name": "Abl interactor 2", "gene_name": "ABI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15498-1", "protein_name": "Proto-oncogene vav", "gene_name": "VAV1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q03135", "url": "https://www.uniprot.org/uniprotkb/Q03135" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15814684", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 88 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { 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"table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 12 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": 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"journal": "Thyroid : official journal of the American Thyroid Association", "date": "2006", "authors": "Gnidehou S, Lacroix L, Sezan A, Ohayon R, Noel-Hudson MS, Morand S, Francon J, Courtin F, Virion A, Dupuy C", "reference": { "type": "PubMed", "id": "16910871", "url": "https://pubmed.ncbi.nlm.nih.gov/16910871" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q03135-1", "protein_name": "Caveolin-1", "gene_name": "CAV1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q1HG43-1", "protein_name": "Dual oxidase maturation factor 1", "gene_name": "DUOXA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRD9-1", "protein_name": "Dual oxidase 1", "gene_name": "DUOX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q1HG44-1", "protein_name": "Dual oxidase maturation factor 2", "gene_name": "DUOXA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92911-1", "protein_name": "Sodium/iodide cotransporter", "gene_name": "SLC5A5", "tax_name": "Human" 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"field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Wild-type APC regulates caveolin-1 expression in human colon adenocarcinoma cell lines via FOXO1a and C-myc.", "journal": "Molecular carcinogenesis", "date": "2008", "authors": "Roy UK, Henkhaus RS, Ignatenko NA, Mora J, Fultz KE, Gerner EW", "reference": { "type": "PubMed", "id": "18444242", "url": "https://pubmed.ncbi.nlm.nih.gov/18444242" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q03135-1", "protein_name": "Caveolin-1", "gene_name": "CAV1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13485-1", "protein_name": "SMAD family member 4", "gene_name": "SMAD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12778-1", "protein_name": "Forkhead box protein O1", "gene_name": "FOXO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15796-1", "protein_name": "SMAD family member 2", "gene_name": "SMAD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24522-1", "protein_name": "Growth arrest and DNA damage-inducible protein GADD45 alpha", "gene_name": "GADD45A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57723-1", "protein_name": "Poly(rC)-binding protein 4", "gene_name": "PCBP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16589-1", "protein_name": "Cyclin-G2", "gene_name": "CCNG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08999-1", "protein_name": "Retinoblastoma-like protein 2", "gene_name": "RBL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43524-1", "protein_name": "Forkhead box protein O3", "gene_name": "FOXO3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P98177-1", "protein_name": "Forkhead box protein O4", "gene_name": "FOXO4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P84022-1", "protein_name": "SMAD family member 3", "gene_name": "SMAD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43474-3", "protein_name": "Krueppel-like factor 4", "gene_name": "KLF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55316-1", "protein_name": "Forkhead box protein G1", "gene_name": "FOXG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46527-1", "protein_name": "Cyclin-dependent kinase inhibitor 1B", "gene_name": "CDKN1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14793-1", "protein_name": "Growth/differentiation factor 8", "gene_name": "MSTN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62324-1", "protein_name": "Protein BTG1", "gene_name": "BTG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38936-1", "protein_name": "Cyclin-dependent kinase inhibitor 1", "gene_name": "CDKN1A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q03135", "url": "https://www.uniprot.org/uniprotkb/Q03135" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.18444242", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 17 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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"Human" }, { "uniprot_canonical_ac": "P0DP23-1", "protein_name": "Calmodulin-1", "gene_name": "CALM1; CALM2; CALM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWM9-1", "protein_name": "Cytoglobin", "gene_name": "CYGB", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75608-1", "protein_name": "Acyl-protein thioesterase 1", "gene_name": "LYPLA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29474-1", "protein_name": "Nitric oxide synthase 3", "gene_name": "NOS3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07900-1", "protein_name": "Heat shock protein HSP 90-alpha", "gene_name": "HSP90AA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43169-1", "protein_name": "Cytochrome b5 type B", "gene_name": "CYB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IVQ6-1", "protein_name": "Palmitoyltransferase ZDHHC21", 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"gene_name": "DOCK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15173-1", "protein_name": "Membrane-associated progesterone receptor component 2", "gene_name": "PGRMC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46940-1", "protein_name": "Ras GTPase-activating-like protein IQGAP1", "gene_name": "IQGAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13153-1", "protein_name": "Serine/threonine-protein kinase PAK 1", "gene_name": "PAK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2X7-1", "protein_name": "ARF GTPase-activating protein GIT1", "gene_name": "GIT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13177-1", "protein_name": "Serine/threonine-protein kinase PAK 2", "gene_name": "PAK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86XL3-1", "protein_name": "Ankyrin repeat and LEM domain-containing protein 2", "gene_name": "ANKLE2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60890-1", "protein_name": "Oligophrenin-1", "gene_name": 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"uniprot_canonical_ac": "Q9C0H5-1", "protein_name": "Rho GTPase-activating protein 39", "gene_name": "ARHGAP39", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94991-1", "protein_name": "SLIT and NTRK-like protein 5", "gene_name": "SLITRK5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N1I0-1", "protein_name": "Dedicator of cytokinesis protein 4", "gene_name": "DOCK4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75962-1", "protein_name": "Triple functional domain protein", "gene_name": "TRIO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TAA9-1", "protein_name": "Vang-like protein 1", "gene_name": "VANGL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BY6-1", "protein_name": "Dedicator of cytokinesis protein 10", "gene_name": "DOCK10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UH62-1", "protein_name": "Armadillo repeat-containing X-linked protein 3", "gene_name": "ARMCX3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15836-1", "protein_name": "Vesicle-associated membrane protein 3", "gene_name": "VAMP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00587-1", "protein_name": "Cdc42 effector protein 1", "gene_name": "CDC42EP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11274-1", "protein_name": "Breakpoint cluster region protein", "gene_name": "BCR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L576-1", "protein_name": "Cytoplasmic FMR1-interacting protein 1", "gene_name": "CYFIP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29317-1", "protein_name": "Ephrin type-A receptor 2", "gene_name": "EPHA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04839-1", "protein_name": "NADPH oxidase 2", "gene_name": "CYBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10911-1", "protein_name": "Proto-oncogene DBL", "gene_name": "MCF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y512-1", "protein_name": "Sorting and assembly machinery component 50 homolog", "gene_name": 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"uniprot_canonical_ac": "P29317-1", "protein_name": "Ephrin type-A receptor 2", "gene_name": "EPHA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJF2-1", "protein_name": "Ras GTPase-activating protein nGAP", "gene_name": "RASAL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULH0-1", "protein_name": "Kinase D-interacting substrate of 220 kDa", "gene_name": "KIDINS220", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15058-1", "protein_name": "Kinesin-like protein KIF14", "gene_name": "KIF14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXS4-1", "protein_name": "Transmembrane protein 59", "gene_name": "TMEM59", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51648-1", "protein_name": "Aldehyde dehydrogenase family 3 member A2", "gene_name": "ALDH3A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00459-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit beta", "gene_name": "PIK3R2", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"protein_name": "Inner nuclear membrane protein Man1", "gene_name": "LEMD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27986-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit alpha", "gene_name": "PIK3R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5T124-1", "protein_name": "UBX domain-containing protein 11", "gene_name": "UBXN11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38159-1", "protein_name": "RNA-binding motif protein, X chromosome", "gene_name": "RBMX", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31948-1", "protein_name": "Stress-induced-phosphoprotein 1", "gene_name": "STIP1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q03135", "url": "https://www.uniprot.org/uniprotkb/Q03135" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 1150, "end_pos": 1150, "kinase_uniprot_canonical_ac": "Q13464-1", "kinase_gene_name": "ROCK1", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9NRY4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9NRY4" }, { "database": "PubMed", "id": "19103606", "url": "https://pubmed.ncbi.nlm.nih.gov/19103606" } ], "site_lbl": "Ser1150", "uniprot_canonical_ac": "Q9NRY4-1" }, { "start_pos": 1236, "end_pos": 1236, "kinase_uniprot_canonical_ac": "Q13464-1", "kinase_gene_name": "ROCK1", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9NRY4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9NRY4" }, { "database": "PubMed", "id": "19103606", "url": "https://pubmed.ncbi.nlm.nih.gov/19103606" } ], "site_lbl": "Ser1236", "uniprot_canonical_ac": "Q9NRY4-1" } ], "record_id": "pubmed.19103606", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Activation of dual oxidases Duox1 and Duox2: differential regulation mediated by camp-dependent protein kinase and protein kinase C-dependent phosphorylation.", "journal": "The Journal of biological chemistry", "date": "2009", "authors": "Rigutto S, Hoste C, Grasberger H, Milenkovic M, Communi D, Dumont JE, Corvilain B, Miot F, De Deken X", "reference": { "type": "PubMed", "id": "19144650", "url": "https://pubmed.ncbi.nlm.nih.gov/19144650" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q03135-1", "protein_name": "Caveolin-1", "gene_name": "CAV1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q1HG43-1", "protein_name": "Dual oxidase maturation factor 1", "gene_name": "DUOXA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRD9-1", "protein_name": "Dual oxidase 1", "gene_name": "DUOX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q1HG44-1", "protein_name": "Dual oxidase maturation factor 2", "gene_name": "DUOXA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92911-1", "protein_name": "Sodium/iodide cotransporter", "gene_name": "SLC5A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01215-1", "protein_name": "Glycoprotein hormones alpha chain", "gene_name": "CGA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01222-1", "protein_name": "Thyrotropin subunit beta", "gene_name": "TSHB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07202-1", "protein_name": "Thyroid peroxidase", "gene_name": "TPO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PHW0-1", "protein_name": "Iodotyrosine deiodinase 1", "gene_name": "IYD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PKC3-1", "protein_name": "Thioredoxin domain-containing protein 11", "gene_name": "TXNDC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRD8-1", "protein_name": "Dual oxidase 2", "gene_name": "DUOX2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q03135", "url": "https://www.uniprot.org/uniprotkb/Q03135" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 1217, "end_pos": 1217, "kinase_uniprot_canonical_ac": "P17612-1", "kinase_gene_name": "PRKACA", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9NRD9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9NRD9" }, { "database": "PubMed", "id": "19144650", "url": "https://pubmed.ncbi.nlm.nih.gov/19144650" } ], "site_lbl": "Ser1217", "uniprot_canonical_ac": "Q9NRD9-1" }, { "start_pos": 955, "end_pos": 955, "kinase_uniprot_canonical_ac": "P17612-1", "kinase_gene_name": "PRKACA", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9NRD9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9NRD9" }, { "database": "PubMed", "id": "19144650", "url": "https://pubmed.ncbi.nlm.nih.gov/19144650" } ], "site_lbl": "Ser955", "uniprot_canonical_ac": "Q9NRD9-1" } ], "record_id": "pubmed.19144650", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 11 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Cytoglobin is expressed in the vasculature and regulates cell respiration and proliferation via nitric oxide dioxygenation.", "journal": "The Journal of biological chemistry", "date": "2009", "authors": "Halligan KE, Jourd'heuil FL, Jourd'heuil D", "reference": { "type": "PubMed", "id": "19147491", "url": "https://pubmed.ncbi.nlm.nih.gov/19147491" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q03135-1", "protein_name": "Caveolin-1", "gene_name": "CAV1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60551-1", "protein_name": "Glycylpeptide N-tetradecanoyltransferase 2", "gene_name": "NMT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30419-1", "protein_name": "Glycylpeptide N-tetradecanoyltransferase 1", "gene_name": "NMT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DP23-1", "protein_name": "Calmodulin-1", "gene_name": "CALM1; CALM2; CALM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWM9-1", "protein_name": "Cytoglobin", "gene_name": "CYGB", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75608-1", "protein_name": "Acyl-protein thioesterase 1", "gene_name": "LYPLA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29474-1", "protein_name": "Nitric oxide synthase 3", "gene_name": "NOS3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07900-1", "protein_name": "Heat shock protein HSP 90-alpha", "gene_name": "HSP90AA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9CX80-1", "protein_name": "Cytoglobin", "gene_name": "Cygb", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O43169-1", "protein_name": "Cytochrome b5 type B", "gene_name": "CYB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IVQ6-1", "protein_name": "Palmitoyltransferase ZDHHC21", "gene_name": "ZDHHC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35270-1", "protein_name": "Sepiapterin reductase", "gene_name": "SPR", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94760-1", "protein_name": "N(G),N(G)-dimethylarginine dimethylaminohydrolase 1", "gene_name": "DDAH1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { 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{ "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Developing dual and specific inhibitors of dimethylarginine dimethylaminohydrolase-1 and nitric oxide synthase: toward a targeted polypharmacology to control nitric oxide.", "journal": 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"protein_name": "Caveolin-1", "gene_name": "CAV1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13485-1", "protein_name": "SMAD family member 4", "gene_name": "SMAD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62333-1", "protein_name": "26S proteasome regulatory subunit 10B", "gene_name": "PSMC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31947-1", "protein_name": "14-3-3 protein sigma", "gene_name": "SFN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63279-1", "protein_name": "SUMO-conjugating enzyme UBC9", "gene_name": "UBE2I", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09472-1", "protein_name": "Histone acetyltransferase p300", "gene_name": "EP300", "tax_name": "Human" }, { "uniprot_canonical_ac": "P84022-1", "protein_name": "SMAD family member 3", "gene_name": "SMAD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63104-1", "protein_name": "14-3-3 protein zeta/delta", "gene_name": "YWHAZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q04917-1", "protein_name": "14-3-3 protein eta", "gene_name": "YWHAH", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31946-1", "protein_name": "14-3-3 protein beta/alpha", "gene_name": "YWHAB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27348-1", "protein_name": "14-3-3 protein theta", "gene_name": "YWHAQ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61981-1", "protein_name": "14-3-3 protein gamma", "gene_name": "YWHAG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15530-1", "protein_name": "3-phosphoinositide-dependent protein kinase 1", "gene_name": "PDPK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08047-1", "protein_name": "Transcription factor Sp1", "gene_name": "SP1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q03135", "url": "https://www.uniprot.org/uniprotkb/Q03135" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.20478047", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 15 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Nitric-oxide dioxygenase function of human cytoglobin with cellular reductants and in rat hepatocytes.", "journal": "The Journal of biological chemistry", "date": "2010", "authors": "Gardner AM, Cook MR, Gardner PR", "reference": { "type": "PubMed", "id": "20511233", "url": "https://pubmed.ncbi.nlm.nih.gov/20511233" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q03135-1", "protein_name": "Caveolin-1", "gene_name": "CAV1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60551-1", "protein_name": "Glycylpeptide N-tetradecanoyltransferase 2", "gene_name": "NMT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30419-1", "protein_name": "Glycylpeptide N-tetradecanoyltransferase 1", "gene_name": "NMT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DP23-1", "protein_name": "Calmodulin-1", "gene_name": "CALM1; CALM2; CALM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWM9-1", "protein_name": "Cytoglobin", "gene_name": "CYGB", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75608-1", "protein_name": "Acyl-protein thioesterase 1", "gene_name": "LYPLA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00173-1", "protein_name": "Cytochrome b5", "gene_name": "Cyb5a", "tax_name": "Rat" }, { "uniprot_canonical_ac": "P29474-1", "protein_name": "Nitric oxide synthase 3", "gene_name": "NOS3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07900-1", "protein_name": "Heat shock protein HSP 90-alpha", "gene_name": "HSP90AA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43169-1", "protein_name": "Cytochrome b5 type B", "gene_name": "CYB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IVQ6-1", "protein_name": "Palmitoyltransferase ZDHHC21", "gene_name": "ZDHHC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35270-1", "protein_name": "Sepiapterin reductase", "gene_name": "SPR", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94760-1", "protein_name": "N(G),N(G)-dimethylarginine dimethylaminohydrolase 1", "gene_name": "DDAH1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q03135", "url": "https://www.uniprot.org/uniprotkb/Q03135" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.20511233", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 14 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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