[ { "title": "Intraflagellar transport motors in cilia: moving along the cell's antenna.", "journal": "The Journal of cell biology", "date": "2008", "authors": "Scholey JM", "reference": { "type": "PubMed", "id": "18180368", "url": "https://pubmed.ncbi.nlm.nih.gov/18180368" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15066-1", "protein_name": "Kinesin-like protein KIF3B", "gene_name": "KIF3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"protein_name": "Cytoplasmic dynein 2 intermediate chain 1", "gene_name": "DYNC2I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDR0-1", "protein_name": "TRAF3-interacting protein 1", "gene_name": "TRAF3IP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ1-1", "protein_name": "Clusterin-associated protein 1", "gene_name": "CLUAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCX1-1", "protein_name": "Cytoplasmic dynein 2 light intermediate chain 1", "gene_name": "DYNC2LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP97-1", "protein_name": "Dynein light chain roadblock-type 1", "gene_name": "DYNLRB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14782-1", "protein_name": "Kinesin-like protein KIF3C", "gene_name": "KIF3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92845-1", "protein_name": "Kinesin-associated protein 3", "gene_name": "KIFAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 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"Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport protein 70A", "gene_name": "IFT70A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", 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Drummond I, Besharse JC", "reference": { "type": "PubMed", "id": "18304522", "url": "https://pubmed.ncbi.nlm.nih.gov/18304522" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15066-1", "protein_name": "Kinesin-like protein KIF3B", "gene_name": "KIF3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "F1QV34-1", "protein_name": "Kinesin-like protein", "gene_name": "kif17", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9BW83-1", "protein_name": "Intraflagellar transport protein 27 homolog", "gene_name": "IFT27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2H3-1", "protein_name": "Intraflagellar transport protein 80 homolog", "gene_name": "IFT80", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVS4-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 1", "gene_name": "DYNC2I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDR0-1", "protein_name": "TRAF3-interacting protein 1", "gene_name": "TRAF3IP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ1-1", "protein_name": "Clusterin-associated protein 1", "gene_name": "CLUAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCX1-1", "protein_name": "Cytoplasmic dynein 2 light intermediate chain 1", "gene_name": "DYNC2LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP97-1", "protein_name": "Dynein light chain roadblock-type 1", "gene_name": "DYNLRB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14782-1", "protein_name": "Kinesin-like protein KIF3C", "gene_name": "KIF3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92845-1", "protein_name": "Kinesin-associated protein 3", "gene_name": "KIFAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 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"total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "THM1 negatively modulates mouse sonic hedgehog signal transduction and affects retrograde intraflagellar transport in cilia.", "journal": "Nature genetics", "date": "2008", "authors": "Tran PV, Haycraft CJ, Besschetnova TY, Turbe-Doan A, Stottmann RW, Herron BJ, Chesebro AL, Qiu H, Scherz PJ, Shah JV, Yoder BK, Beier DR", "reference": { "type": "PubMed", "id": "18327258", "url": "https://pubmed.ncbi.nlm.nih.gov/18327258" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22694-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit beta", "gene_name": "PRKACB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13635-1", "protein_name": "Protein patched homolog 1", "gene_name": "PTCH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5JWF2-1", "protein_name": "Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas", "gene_name": "GNAS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99835-1", "protein_name": "Protein smoothened", "gene_name": "SMO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULD6-1", "protein_name": "Protein inturned", "gene_name": "INTU", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit gamma", "gene_name": "PRKACG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2M1P5-1", "protein_name": "Kinesin-like protein KIF7", "gene_name": "KIF7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q0HA38-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "Ttc21b", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q68CZ1-1", "protein_name": "Protein fantom", "gene_name": "RPGRIP1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N6U8-1", "protein_name": "G protein-coupled receptor 161", "gene_name": "GPR161", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13861-1", "protein_name": "cAMP-dependent protein kinase type II-alpha regulatory subunit", "gene_name": "PRKAR2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08151-1", "protein_name": "Transcription activator GLI1", "gene_name": "GLI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit alpha", "gene_name": "PRKACA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75386-1", "protein_name": "Tubby-related protein 3", "gene_name": "TULP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95622-1", "protein_name": "Adenylate cyclase type 5", "gene_name": "ADCY5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08828-1", "protein_name": "Adenylate cyclase type 1", "gene_name": "ADCY1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40145-1", "protein_name": "Adenylate cyclase type 8", "gene_name": "ADCY8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60266-1", "protein_name": "Adenylate cyclase type 3", "gene_name": "ADCY3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFM4-1", "protein_name": "Adenylate cyclase type 4", "gene_name": "ADCY4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31323-1", "protein_name": "cAMP-dependent protein kinase type II-beta regulatory subunit", "gene_name": "PRKAR2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31321-1", "protein_name": "cAMP-dependent protein kinase type I-beta regulatory subunit", "gene_name": "PRKAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75665-1", "protein_name": "Centriole and centriolar satellite protein OFD1", "gene_name": "OFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BT04-1", "protein_name": "Protein fuzzy homolog", "gene_name": "FUZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10071-1", "protein_name": "Transcription activator GLI3", "gene_name": "GLI3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMX1-1", "protein_name": "Suppressor of fused homolog", "gene_name": "SUFU", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXB0-1", "protein_name": "Tectonic-like complex member MKS1", "gene_name": "MKS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10070-5", "protein_name": "Transcription activator GLI2", "gene_name": "GLI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60503-1", "protein_name": "Adenylate cyclase type 9", "gene_name": "ADCY9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PN6-1", "protein_name": "Adenylate cyclase type 10", "gene_name": "ADCY10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51828-1", "protein_name": "Adenylate cyclase type 7", "gene_name": "ADCY7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43306-1", "protein_name": "Adenylate cyclase type 6", "gene_name": "ADCY6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08462-1", "protein_name": "Adenylate cyclase type 2", "gene_name": "ADCY2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.18327258", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 57 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Elipsa is an early determinant of ciliogenesis that links the IFT particle to membrane-associated small GTPase Rab8.", "journal": "Nature cell biology", "date": "2008", "authors": "Omori Y, Zhao C, Saras A, Mukhopadhyay S, Kim W, Furukawa T, Sengupta P, Veraksa A, Malicki J", "reference": { "type": "PubMed", "id": "18364699", "url": "https://pubmed.ncbi.nlm.nih.gov/18364699" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15066-1", "protein_name": "Kinesin-like protein KIF3B", "gene_name": "KIF3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BW83-1", "protein_name": "Intraflagellar transport protein 27 homolog", "gene_name": "IFT27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2H3-1", "protein_name": "Intraflagellar transport protein 80 homolog", "gene_name": "IFT80", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVS4-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 1", "gene_name": "DYNC2I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0AB13A9T3-1", "protein_name": "Rab GTPase-binding effector protein 1 isoform 1", "gene_name": "rabep1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q8TDR0-1", "protein_name": "TRAF3-interacting protein 1", "gene_name": "TRAF3IP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ1-1", "protein_name": "Clusterin-associated protein 1", "gene_name": "CLUAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCX1-1", "protein_name": "Cytoplasmic dynein 2 light intermediate chain 1", "gene_name": "DYNC2LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP97-1", "protein_name": "Dynein light chain roadblock-type 1", "gene_name": "DYNLRB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14782-1", "protein_name": "Kinesin-like protein KIF3C", "gene_name": "KIF3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92845-1", "protein_name": "Kinesin-associated protein 3", "gene_name": "KIFAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0AVF1-1", "protein_name": "Intraflagellar transport protein 56", "gene_name": "IFT56", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WW35-1", "protein_name": "Dynein light chain Tctex-type protein 2B", "gene_name": "DYNLT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EX3-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 2", "gene_name": "DYNC2I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport protein 70A", "gene_name": "IFT70A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7X7-1", "protein_name": "Intraflagellar transport protein 22 homolog", "gene_name": "IFT22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y547-1", "protein_name": "Intraflagellar transport protein 25 homolog", "gene_name": "IFT25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYA0-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "IFT81", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N7M0-1", "protein_name": "Dynein light chain Tctex-type 5", "gene_name": "DYNLT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZS6-1", "protein_name": "Dynein light chain Tctex-type protein 2", "gene_name": "DYNLT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15643-1", "protein_name": "Thyroid receptor-interacting protein 11", "gene_name": "TRIP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY31-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "IFT20", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.18364699", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 55 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "An essential role for DYF-11/MIP-T3 in assembling functional intraflagellar transport complexes.", "journal": "PLoS genetics", "date": "2008", "authors": "Li C, Inglis PN, Leitch CC, Efimenko E, Zaghloul NA, Mok CA, Davis EE, Bialas NJ, Healey MP, Heon E, Zhen M, Swoboda P, Katsanis N, Leroux MR", "reference": { "type": "PubMed", "id": "18369462", "url": "https://pubmed.ncbi.nlm.nih.gov/18369462" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15066-1", "protein_name": "Kinesin-like protein KIF3B", "gene_name": "KIF3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BW83-1", "protein_name": "Intraflagellar transport protein 27 homolog", "gene_name": "IFT27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2H3-1", "protein_name": "Intraflagellar transport protein 80 homolog", "gene_name": "IFT80", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVS4-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 1", "gene_name": "DYNC2I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDR0-1", "protein_name": "TRAF3-interacting protein 1", "gene_name": "TRAF3IP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ1-1", "protein_name": "Clusterin-associated protein 1", "gene_name": "CLUAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCX1-1", "protein_name": "Cytoplasmic dynein 2 light intermediate chain 1", "gene_name": "DYNC2LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP97-1", "protein_name": "Dynein light chain roadblock-type 1", "gene_name": "DYNLRB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14782-1", "protein_name": "Kinesin-like protein KIF3C", "gene_name": "KIF3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92845-1", "protein_name": "Kinesin-associated protein 3", "gene_name": "KIFAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0AVF1-1", "protein_name": "Intraflagellar transport protein 56", "gene_name": "IFT56", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WW35-1", "protein_name": "Dynein light chain Tctex-type protein 2B", "gene_name": "DYNLT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EX3-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 2", "gene_name": "DYNC2I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport protein 70A", "gene_name": "IFT70A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7X7-1", "protein_name": "Intraflagellar transport protein 22 homolog", "gene_name": "IFT22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y547-1", "protein_name": "Intraflagellar transport protein 25 homolog", "gene_name": "IFT25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYA0-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "IFT81", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N7M0-1", "protein_name": "Dynein light chain Tctex-type 5", "gene_name": "DYNLT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZS6-1", "protein_name": "Dynein light chain Tctex-type protein 2", "gene_name": "DYNLT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15643-1", "protein_name": "Thyroid receptor-interacting protein 11", "gene_name": "TRIP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY31-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "IFT20", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.18369462", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 54 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "ODA16 aids axonemal outer row dynein assembly through an interaction with the intraflagellar transport machinery.", "journal": "The Journal of cell biology", "date": "2008", "authors": "Ahmed NT, Gao C, Lucker BF, Cole DG, Mitchell DR", "reference": { "type": "PubMed", "id": "18852297", "url": "https://pubmed.ncbi.nlm.nih.gov/18852297" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15066-1", "protein_name": "Kinesin-like protein KIF3B", "gene_name": "KIF3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BW83-1", "protein_name": "Intraflagellar transport protein 27 homolog", "gene_name": "IFT27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2H3-1", "protein_name": "Intraflagellar transport protein 80 homolog", "gene_name": "IFT80", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVS4-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 1", "gene_name": "DYNC2I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDR0-1", "protein_name": "TRAF3-interacting protein 1", "gene_name": "TRAF3IP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ1-1", "protein_name": "Clusterin-associated protein 1", "gene_name": "CLUAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCX1-1", "protein_name": "Cytoplasmic dynein 2 light intermediate chain 1", "gene_name": "DYNC2LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP97-1", "protein_name": "Dynein light chain roadblock-type 1", "gene_name": "DYNLRB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14782-1", "protein_name": "Kinesin-like protein KIF3C", "gene_name": "KIF3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92845-1", "protein_name": "Kinesin-associated protein 3", "gene_name": "KIFAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0AVF1-1", "protein_name": "Intraflagellar transport protein 56", "gene_name": "IFT56", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WW35-1", "protein_name": "Dynein light chain Tctex-type protein 2B", "gene_name": "DYNLT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9DB07-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "Ift46", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q96EX3-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 2", "gene_name": "DYNC2I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport protein 70A", "gene_name": "IFT70A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N136-1", "protein_name": "Dynein assembly factor with WD repeat domains 1", "gene_name": "DAW1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7X7-1", "protein_name": "Intraflagellar transport protein 22 homolog", "gene_name": "IFT22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y547-1", "protein_name": "Intraflagellar transport protein 25 homolog", "gene_name": "IFT25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYA0-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "IFT81", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N7M0-1", "protein_name": "Dynein light chain Tctex-type 5", "gene_name": "DYNLT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZS6-1", "protein_name": "Dynein light chain Tctex-type protein 2", "gene_name": "DYNLT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15643-1", "protein_name": "Thyroid receptor-interacting protein 11", "gene_name": "TRIP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY31-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "IFT20", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.18852297", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 56 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Defective ciliogenesis, embryonic lethality and severe impairment of the Sonic Hedgehog pathway caused by inactivation of the mouse complex A intraflagellar transport gene Ift122/Wdr10, partially overlapping with the DNA repair gene Med1/Mbd4.", "journal": "Developmental biology", "date": "2009", "authors": "Cortellino S, Wang C, Wang B, Bassi MR, Caretti E, Champeval D, Calmont A, Jarnik M, Burch J, Zaret KS, Larue L, Bellacosa A", "reference": { "type": "PubMed", "id": "19000668", "url": "https://pubmed.ncbi.nlm.nih.gov/19000668" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22694-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit beta", "gene_name": "PRKACB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13635-1", "protein_name": "Protein patched homolog 1", "gene_name": "PTCH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5JWF2-1", "protein_name": "Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas", "gene_name": "GNAS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99835-1", "protein_name": "Protein smoothened", "gene_name": "SMO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULD6-1", "protein_name": "Protein inturned", "gene_name": "INTU", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit gamma", "gene_name": "PRKACG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2M1P5-1", "protein_name": "Kinesin-like protein KIF7", "gene_name": "KIF7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68CZ1-1", "protein_name": "Protein fantom", "gene_name": "RPGRIP1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N6U8-1", "protein_name": "G protein-coupled receptor 161", "gene_name": "GPR161", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13861-1", "protein_name": "cAMP-dependent protein kinase type II-alpha regulatory subunit", "gene_name": "PRKAR2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08151-1", "protein_name": "Transcription activator GLI1", "gene_name": "GLI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit alpha", "gene_name": "PRKACA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75386-1", "protein_name": "Tubby-related protein 3", "gene_name": "TULP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95622-1", "protein_name": "Adenylate cyclase type 5", "gene_name": "ADCY5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08828-1", "protein_name": "Adenylate cyclase type 1", "gene_name": "ADCY1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40145-1", "protein_name": "Adenylate cyclase type 8", "gene_name": "ADCY8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60266-1", "protein_name": "Adenylate cyclase type 3", "gene_name": "ADCY3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFM4-1", "protein_name": "Adenylate cyclase type 4", "gene_name": "ADCY4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31323-1", "protein_name": "cAMP-dependent protein kinase type II-beta regulatory subunit", "gene_name": "PRKAR2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31321-1", "protein_name": "cAMP-dependent protein kinase type I-beta regulatory subunit", "gene_name": "PRKAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75665-1", "protein_name": "Centriole and centriolar satellite protein OFD1", "gene_name": "OFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6NWV3-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "Ift122", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BT04-1", "protein_name": "Protein fuzzy homolog", "gene_name": "FUZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10071-1", "protein_name": "Transcription activator GLI3", "gene_name": "GLI3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMX1-1", "protein_name": "Suppressor of fused homolog", "gene_name": "SUFU", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXB0-1", "protein_name": "Tectonic-like complex member MKS1", "gene_name": "MKS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10070-5", "protein_name": "Transcription activator GLI2", "gene_name": "GLI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60503-1", "protein_name": "Adenylate cyclase type 9", "gene_name": "ADCY9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PN6-1", "protein_name": "Adenylate cyclase type 10", "gene_name": "ADCY10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51828-1", "protein_name": "Adenylate cyclase type 7", "gene_name": "ADCY7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43306-1", "protein_name": "Adenylate cyclase type 6", "gene_name": "ADCY6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08462-1", "protein_name": "Adenylate cyclase type 2", "gene_name": "ADCY2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.19000668", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 57 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The Golgin GMAP210/TRIP11 anchors IFT20 to the Golgi complex.", "journal": "PLoS genetics", "date": "2008", "authors": "Follit JA, San Agustin JT, Xu F, Jonassen JA, Samtani R, Lo CW, Pazour GJ", "reference": { "type": "PubMed", "id": "19112494", "url": "https://pubmed.ncbi.nlm.nih.gov/19112494" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15066-1", "protein_name": "Kinesin-like protein KIF3B", "gene_name": "KIF3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BW83-1", "protein_name": "Intraflagellar transport protein 27 homolog", "gene_name": "IFT27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2H3-1", "protein_name": "Intraflagellar transport protein 80 homolog", "gene_name": "IFT80", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVS4-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 1", "gene_name": "DYNC2I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDR0-1", "protein_name": "TRAF3-interacting protein 1", "gene_name": "TRAF3IP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ1-1", "protein_name": "Clusterin-associated protein 1", "gene_name": "CLUAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCX1-1", "protein_name": "Cytoplasmic dynein 2 light intermediate chain 1", "gene_name": "DYNC2LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP97-1", "protein_name": "Dynein light chain roadblock-type 1", "gene_name": "DYNLRB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14782-1", "protein_name": "Kinesin-like protein KIF3C", "gene_name": "KIF3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92845-1", "protein_name": "Kinesin-associated protein 3", "gene_name": "KIFAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0AVF1-1", "protein_name": "Intraflagellar transport protein 56", "gene_name": "IFT56", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WW35-1", "protein_name": "Dynein light chain Tctex-type protein 2B", "gene_name": "DYNLT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q61025-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "Ift20", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q96EX3-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 2", "gene_name": "DYNC2I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport protein 70A", "gene_name": "IFT70A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7X7-1", "protein_name": "Intraflagellar transport protein 22 homolog", "gene_name": "IFT22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y547-1", "protein_name": "Intraflagellar transport protein 25 homolog", "gene_name": "IFT25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "E9Q512-1", "protein_name": "Thyroid hormone receptor interactor 11", "gene_name": "Trip11", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYA0-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "IFT81", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N7M0-1", "protein_name": "Dynein light chain Tctex-type 5", "gene_name": "DYNLT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZS6-1", "protein_name": "Dynein light chain Tctex-type protein 2", "gene_name": "DYNLT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15643-1", "protein_name": "Thyroid receptor-interacting protein 11", "gene_name": "TRIP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY31-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "IFT20", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.19112494", "abstract": 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"n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Intraflagellar transport (IFT) role in ciliary assembly, resorption and signalling.", "journal": "Current topics in developmental biology", "date": "2008", "authors": "Pedersen LB, Rosenbaum JL", "reference": { "type": "PubMed", "id": "19147001", "url": "https://pubmed.ncbi.nlm.nih.gov/19147001" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15066-1", "protein_name": "Kinesin-like protein KIF3B", "gene_name": "KIF3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BW83-1", "protein_name": "Intraflagellar transport protein 27 homolog", "gene_name": "IFT27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2H3-1", "protein_name": "Intraflagellar transport protein 80 homolog", "gene_name": "IFT80", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVS4-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 1", "gene_name": "DYNC2I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDR0-1", "protein_name": "TRAF3-interacting protein 1", "gene_name": "TRAF3IP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ1-1", "protein_name": "Clusterin-associated protein 1", "gene_name": "CLUAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCX1-1", "protein_name": "Cytoplasmic dynein 2 light intermediate chain 1", "gene_name": "DYNC2LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP97-1", "protein_name": "Dynein light chain roadblock-type 1", "gene_name": "DYNLRB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14782-1", "protein_name": "Kinesin-like protein KIF3C", "gene_name": "KIF3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92845-1", "protein_name": "Kinesin-associated protein 3", "gene_name": "KIFAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0AVF1-1", "protein_name": "Intraflagellar transport protein 56", "gene_name": "IFT56", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WW35-1", "protein_name": "Dynein light chain Tctex-type protein 2B", "gene_name": "DYNLT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EX3-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 2", "gene_name": "DYNC2I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport protein 70A", "gene_name": "IFT70A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7X7-1", "protein_name": "Intraflagellar transport protein 22 homolog", "gene_name": "IFT22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y547-1", "protein_name": "Intraflagellar transport protein 25 homolog", "gene_name": "IFT25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYA0-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "IFT81", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N7M0-1", "protein_name": "Dynein light chain Tctex-type 5", "gene_name": "DYNLT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZS6-1", "protein_name": "Dynein light chain Tctex-type protein 2", "gene_name": "DYNLT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15643-1", "protein_name": "Thyroid receptor-interacting protein 11", "gene_name": "TRIP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY31-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "IFT20", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.19147001", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 54 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Mouse hitchhiker mutants have spina bifida, dorso-ventral patterning defects and polydactyly: identification of Tulp3 as a novel negative regulator of the Sonic hedgehog pathway.", "journal": "Human molecular genetics", "date": "2009", "authors": "Patterson VL, Damrau C, Paudyal A, Reeve B, Grimes DT, Stewart ME, Williams DJ, Siggers P, Greenfield A, Murdoch JN", "reference": { "type": "PubMed", "id": "19223390", "url": "https://pubmed.ncbi.nlm.nih.gov/19223390" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22694-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit beta", "gene_name": "PRKACB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13635-1", "protein_name": "Protein patched homolog 1", "gene_name": "PTCH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5JWF2-1", "protein_name": "Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas", "gene_name": "GNAS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99835-1", "protein_name": "Protein smoothened", "gene_name": "SMO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULD6-1", "protein_name": "Protein inturned", "gene_name": "INTU", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit gamma", "gene_name": "PRKACG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2M1P5-1", "protein_name": "Kinesin-like protein KIF7", "gene_name": "KIF7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O88413-1", "protein_name": "Tubby-related protein 3", "gene_name": "Tulp3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q68CZ1-1", "protein_name": "Protein fantom", "gene_name": "RPGRIP1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N6U8-1", "protein_name": "G protein-coupled receptor 161", "gene_name": "GPR161", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13861-1", "protein_name": "cAMP-dependent protein kinase type II-alpha regulatory subunit", "gene_name": "PRKAR2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08151-1", "protein_name": "Transcription activator GLI1", "gene_name": "GLI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit alpha", "gene_name": "PRKACA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75386-1", "protein_name": "Tubby-related protein 3", "gene_name": "TULP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95622-1", "protein_name": "Adenylate cyclase type 5", "gene_name": "ADCY5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08828-1", "protein_name": "Adenylate cyclase type 1", "gene_name": "ADCY1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40145-1", "protein_name": "Adenylate cyclase type 8", "gene_name": "ADCY8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60266-1", "protein_name": "Adenylate cyclase type 3", "gene_name": "ADCY3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFM4-1", "protein_name": "Adenylate cyclase type 4", "gene_name": "ADCY4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31323-1", "protein_name": "cAMP-dependent protein kinase type II-beta regulatory subunit", "gene_name": "PRKAR2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31321-1", "protein_name": "cAMP-dependent protein kinase type I-beta regulatory subunit", "gene_name": "PRKAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75665-1", "protein_name": "Centriole and centriolar satellite protein OFD1", "gene_name": "OFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BT04-1", "protein_name": "Protein fuzzy homolog", "gene_name": "FUZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10071-1", "protein_name": "Transcription activator GLI3", "gene_name": "GLI3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMX1-1", "protein_name": "Suppressor of fused homolog", "gene_name": "SUFU", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXB0-1", "protein_name": "Tectonic-like complex member MKS1", "gene_name": "MKS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10070-5", "protein_name": "Transcription activator GLI2", "gene_name": "GLI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60503-1", "protein_name": "Adenylate cyclase type 9", "gene_name": "ADCY9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PN6-1", "protein_name": "Adenylate cyclase type 10", "gene_name": "ADCY10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51828-1", "protein_name": "Adenylate cyclase type 7", "gene_name": "ADCY7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43306-1", "protein_name": "Adenylate cyclase type 6", "gene_name": "ADCY6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08462-1", "protein_name": "Adenylate cyclase type 2", "gene_name": "ADCY2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.19223390", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 57 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Characterization of mouse IFT complex B.", "journal": "Cell motility and the cytoskeleton", "date": "2009", "authors": "Follit JA, Xu F, Keady BT, Pazour GJ", "reference": { "type": "PubMed", "id": "19253336", "url": "https://pubmed.ncbi.nlm.nih.gov/19253336" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9D0P8-1", "protein_name": "Intraflagellar transport protein 27 homolog", "gene_name": "Ift27", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q62559-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "Ift52", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O35594-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "Ift81", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9DAI2-1", "protein_name": "Intraflagellar transport protein 22 homolog", "gene_name": "Ift22", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D6H2-1", "protein_name": "Intraflagellar transport protein 25 homolog", "gene_name": "Ift25", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8K057-1", "protein_name": "Intraflagellar transport protein 80 homolog", "gene_name": "Ift80", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15066-1", "protein_name": "Kinesin-like protein KIF3B", "gene_name": "KIF3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BW83-1", "protein_name": "Intraflagellar transport protein 27 homolog", "gene_name": "IFT27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2H3-1", "protein_name": "Intraflagellar transport protein 80 homolog", "gene_name": "IFT80", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVS4-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 1", "gene_name": "DYNC2I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q149C2-1", "protein_name": "TRAF3-interacting protein 1", "gene_name": "Traf3ip1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8TDR0-1", "protein_name": "TRAF3-interacting protein 1", "gene_name": "TRAF3IP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ1-1", "protein_name": "Clusterin-associated protein 1", "gene_name": "CLUAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCX1-1", "protein_name": "Cytoplasmic dynein 2 light intermediate chain 1", "gene_name": "DYNC2LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP97-1", "protein_name": "Dynein light chain roadblock-type 1", "gene_name": "DYNLRB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14782-1", "protein_name": "Kinesin-like protein KIF3C", "gene_name": "KIF3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92845-1", "protein_name": "Kinesin-associated protein 3", "gene_name": "KIFAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q61371-1", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "Ift88", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0AVF1-1", "protein_name": "Intraflagellar transport protein 56", "gene_name": "IFT56", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WW35-1", "protein_name": "Dynein light chain Tctex-type protein 2B", "gene_name": "DYNLT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q61025-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "Ift20", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9DB07-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "Ift46", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q96EX3-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 2", "gene_name": "DYNC2I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport protein 70A", "gene_name": "IFT70A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7X7-1", "protein_name": "Intraflagellar transport protein 22 homolog", "gene_name": "IFT22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8BXG3-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "Ift57", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9Y547-1", "protein_name": "Intraflagellar transport protein 25 homolog", "gene_name": "IFT25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYA0-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "IFT81", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N7M0-1", "protein_name": "Dynein light chain Tctex-type 5", "gene_name": "DYNLT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZS6-1", "protein_name": "Dynein light chain Tctex-type protein 2", "gene_name": "DYNLT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15643-1", "protein_name": "Thyroid receptor-interacting protein 11", "gene_name": "TRIP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY31-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "IFT20", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.19253336", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 65 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Tubby-like protein 3 (TULP3) regulates patterning in the mouse embryo through inhibition of Hedgehog signaling.", "journal": "Human molecular genetics", "date": "2009", "authors": "Norman RX, Ko HW, Huang V, Eun CM, Abler LL, Zhang Z, Sun X, Eggenschwiler JT", "reference": { "type": "PubMed", "id": "19286674", "url": "https://pubmed.ncbi.nlm.nih.gov/19286674" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22694-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit beta", "gene_name": "PRKACB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13635-1", "protein_name": "Protein patched homolog 1", "gene_name": "PTCH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5JWF2-1", "protein_name": "Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas", "gene_name": "GNAS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99835-1", "protein_name": "Protein smoothened", "gene_name": "SMO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULD6-1", "protein_name": "Protein inturned", "gene_name": "INTU", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit gamma", "gene_name": "PRKACG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2M1P5-1", "protein_name": "Kinesin-like protein KIF7", "gene_name": "KIF7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O88413-1", "protein_name": "Tubby-related protein 3", "gene_name": "Tulp3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q68CZ1-1", "protein_name": "Protein fantom", "gene_name": "RPGRIP1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N6U8-1", "protein_name": "G protein-coupled receptor 161", "gene_name": "GPR161", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13861-1", "protein_name": "cAMP-dependent protein kinase type II-alpha regulatory subunit", "gene_name": "PRKAR2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08151-1", "protein_name": "Transcription activator GLI1", "gene_name": "GLI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit alpha", "gene_name": "PRKACA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75386-1", "protein_name": "Tubby-related protein 3", "gene_name": "TULP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95622-1", "protein_name": "Adenylate cyclase type 5", "gene_name": "ADCY5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08828-1", "protein_name": "Adenylate cyclase type 1", "gene_name": "ADCY1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40145-1", "protein_name": "Adenylate cyclase type 8", "gene_name": "ADCY8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60266-1", "protein_name": "Adenylate cyclase type 3", "gene_name": "ADCY3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFM4-1", "protein_name": "Adenylate cyclase type 4", "gene_name": "ADCY4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31323-1", "protein_name": "cAMP-dependent protein kinase type II-beta regulatory subunit", "gene_name": "PRKAR2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31321-1", "protein_name": "cAMP-dependent protein kinase type I-beta regulatory subunit", "gene_name": "PRKAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75665-1", "protein_name": "Centriole and centriolar satellite protein OFD1", "gene_name": "OFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BT04-1", "protein_name": "Protein fuzzy homolog", "gene_name": "FUZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10071-1", "protein_name": "Transcription activator GLI3", "gene_name": "GLI3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMX1-1", "protein_name": "Suppressor of fused homolog", "gene_name": "SUFU", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXB0-1", "protein_name": "Tectonic-like complex member MKS1", "gene_name": "MKS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10070-5", "protein_name": "Transcription activator GLI2", "gene_name": "GLI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60503-1", "protein_name": "Adenylate cyclase type 9", "gene_name": "ADCY9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PN6-1", "protein_name": "Adenylate cyclase type 10", "gene_name": "ADCY10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51828-1", "protein_name": "Adenylate cyclase type 7", "gene_name": "ADCY7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43306-1", "protein_name": "Adenylate cyclase type 6", "gene_name": "ADCY6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08462-1", "protein_name": "Adenylate cyclase type 2", "gene_name": "ADCY2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.19286674", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 57 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Different roles for KIF17 and kinesin II in photoreceptor development and maintenance.", "journal": "Developmental dynamics : an official publication of the American Association of Anatomists", "date": "2009", "authors": "Insinna C, Humby M, Sedmak T, Wolfrum U, Besharse JC", "reference": { "type": "PubMed", "id": "19384852", "url": "https://pubmed.ncbi.nlm.nih.gov/19384852" }, "referenced_glycans": [], "referenced_proteins": [ { 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"tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9BW83-1", "protein_name": "Intraflagellar transport protein 27 homolog", "gene_name": "IFT27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2H3-1", "protein_name": "Intraflagellar transport protein 80 homolog", "gene_name": "IFT80", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVS4-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 1", "gene_name": "DYNC2I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "F1QN54-1", "protein_name": "Kinesin-like protein KIF3B", "gene_name": "kif3b", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q8TDR0-1", "protein_name": "TRAF3-interacting protein 1", "gene_name": "TRAF3IP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ1-1", "protein_name": "Clusterin-associated protein 1", "gene_name": "CLUAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCX1-1", "protein_name": "Cytoplasmic dynein 2 light intermediate chain 1", "gene_name": "DYNC2LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP97-1", "protein_name": "Dynein light chain roadblock-type 1", "gene_name": "DYNLRB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14782-1", "protein_name": "Kinesin-like protein KIF3C", "gene_name": "KIF3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92845-1", "protein_name": "Kinesin-associated protein 3", "gene_name": "KIFAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0AVF1-1", "protein_name": "Intraflagellar transport protein 56", "gene_name": "IFT56", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WW35-1", "protein_name": "Dynein light chain Tctex-type protein 2B", "gene_name": "DYNLT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EX3-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 2", "gene_name": "DYNC2I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport protein 70A", "gene_name": "IFT70A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7X7-1", "protein_name": "Intraflagellar transport protein 22 homolog", "gene_name": "IFT22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y547-1", "protein_name": "Intraflagellar transport protein 25 homolog", "gene_name": "IFT25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYA0-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "IFT81", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N7M0-1", "protein_name": "Dynein light chain Tctex-type 5", "gene_name": "DYNLT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZS6-1", "protein_name": "Dynein light chain Tctex-type protein 2", "gene_name": "DYNLT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15643-1", "protein_name": "Thyroid receptor-interacting protein 11", "gene_name": "TRIP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY31-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "IFT20", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "SnapShot: Intraflagellar transport.", "journal": "Cell", "date": "2009", "authors": "Cole DG, Snell WJ", "reference": { "type": "PubMed", "id": "19450523", "url": "https://pubmed.ncbi.nlm.nih.gov/19450523" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15066-1", "protein_name": "Kinesin-like protein KIF3B", "gene_name": "KIF3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BW83-1", "protein_name": "Intraflagellar transport protein 27 homolog", "gene_name": 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"TRAF3IP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ1-1", "protein_name": "Clusterin-associated protein 1", "gene_name": "CLUAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCX1-1", "protein_name": "Cytoplasmic dynein 2 light intermediate chain 1", "gene_name": "DYNC2LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP97-1", "protein_name": "Dynein light chain roadblock-type 1", "gene_name": "DYNLRB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14782-1", "protein_name": "Kinesin-like protein KIF3C", "gene_name": "KIF3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92845-1", "protein_name": "Kinesin-associated protein 3", "gene_name": "KIFAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0AVF1-1", "protein_name": "Intraflagellar transport protein 56", "gene_name": "IFT56", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WW35-1", "protein_name": "Dynein light chain Tctex-type protein 2B", "gene_name": "DYNLT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EX3-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 2", "gene_name": "DYNC2I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport protein 70A", "gene_name": "IFT70A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7X7-1", "protein_name": "Intraflagellar transport protein 22 homolog", "gene_name": "IFT22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y547-1", "protein_name": "Intraflagellar transport protein 25 homolog", "gene_name": "IFT25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYA0-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "IFT81", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N7M0-1", "protein_name": "Dynein light chain Tctex-type 5", "gene_name": "DYNLT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZS6-1", "protein_name": "Dynein light chain Tctex-type protein 2", "gene_name": "DYNLT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15643-1", "protein_name": "Thyroid receptor-interacting protein 11", "gene_name": "TRIP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY31-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "IFT20", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.19450523", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 54 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Retrograde intraflagellar transport mutants identify complex A proteins with multiple genetic interactions in Chlamydomonas reinhardtii.", "journal": "Genetics", "date": "2009", "authors": "Iomini C, Li L, Esparza JM, Dutcher SK", "reference": { "type": "PubMed", "id": "19720863", "url": "https://pubmed.ncbi.nlm.nih.gov/19720863" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15066-1", "protein_name": "Kinesin-like protein KIF3B", "gene_name": "KIF3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BW83-1", "protein_name": "Intraflagellar transport protein 27 homolog", "gene_name": "IFT27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2H3-1", "protein_name": "Intraflagellar transport protein 80 homolog", "gene_name": "IFT80", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVS4-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 1", "gene_name": "DYNC2I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDR0-1", "protein_name": "TRAF3-interacting protein 1", "gene_name": "TRAF3IP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ1-1", "protein_name": "Clusterin-associated protein 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"uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WW35-1", "protein_name": "Dynein light chain Tctex-type protein 2B", "gene_name": "DYNLT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EX3-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 2", "gene_name": "DYNC2I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport protein 70A", "gene_name": "IFT70A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7X7-1", "protein_name": "Intraflagellar transport protein 22 homolog", "gene_name": "IFT22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y547-1", "protein_name": "Intraflagellar transport protein 25 homolog", "gene_name": "IFT25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYA0-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "IFT81", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N7M0-1", "protein_name": "Dynein light chain Tctex-type 5", "gene_name": "DYNLT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZS6-1", "protein_name": "Dynein light chain Tctex-type protein 2", "gene_name": "DYNLT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15643-1", "protein_name": "Thyroid receptor-interacting protein 11", "gene_name": "TRIP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY31-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "IFT20", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.19720863", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 54 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { 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"gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99835-1", "protein_name": "Protein smoothened", "gene_name": "SMO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULD6-1", "protein_name": "Protein inturned", "gene_name": "INTU", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit gamma", "gene_name": "PRKACG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2M1P5-1", "protein_name": "Kinesin-like protein KIF7", "gene_name": "KIF7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3UYI6-1", "protein_name": "Protein fuzzy homolog", "gene_name": "Fuz", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q68CZ1-1", "protein_name": "Protein fantom", "gene_name": "RPGRIP1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N6U8-1", "protein_name": "G protein-coupled receptor 161", "gene_name": "GPR161", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13861-1", "protein_name": "cAMP-dependent protein kinase type II-alpha 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"uniprot_canonical_ac": "O60266-1", "protein_name": "Adenylate cyclase type 3", "gene_name": "ADCY3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFM4-1", "protein_name": "Adenylate cyclase type 4", "gene_name": "ADCY4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31323-1", "protein_name": "cAMP-dependent protein kinase type II-beta regulatory subunit", "gene_name": "PRKAR2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31321-1", "protein_name": "cAMP-dependent protein kinase type I-beta regulatory subunit", "gene_name": "PRKAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75665-1", "protein_name": "Centriole and centriolar satellite protein OFD1", "gene_name": "OFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BT04-1", "protein_name": "Protein fuzzy homolog", "gene_name": "FUZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10071-1", "protein_name": "Transcription activator GLI3", "gene_name": "GLI3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMX1-1", "protein_name": "Suppressor of fused homolog", "gene_name": "SUFU", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXB0-1", "protein_name": "Tectonic-like complex member MKS1", "gene_name": "MKS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10070-5", "protein_name": "Transcription activator GLI2", "gene_name": "GLI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60503-1", "protein_name": "Adenylate cyclase type 9", "gene_name": "ADCY9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PN6-1", "protein_name": "Adenylate cyclase type 10", "gene_name": "ADCY10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51828-1", "protein_name": "Adenylate cyclase type 7", "gene_name": "ADCY7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43306-1", "protein_name": "Adenylate cyclase type 6", "gene_name": "ADCY6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08462-1", "protein_name": "Adenylate cyclase type 2", "gene_name": "ADCY2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.19767740", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 57 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A mouse model for Meckel syndrome reveals Mks1 is required for ciliogenesis and Hedgehog signaling.", "journal": "Human molecular genetics", "date": "2009", "authors": "Weatherbee SD, Niswander LA, Anderson KV", "reference": { "type": "PubMed", "id": "19776033", "url": "https://pubmed.ncbi.nlm.nih.gov/19776033" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22694-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit beta", "gene_name": "PRKACB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13635-1", "protein_name": "Protein patched homolog 1", "gene_name": "PTCH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5JWF2-1", "protein_name": "Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas", "gene_name": "GNAS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99835-1", "protein_name": "Protein smoothened", "gene_name": "SMO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULD6-1", "protein_name": "Protein inturned", "gene_name": "INTU", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit gamma", "gene_name": "PRKACG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2M1P5-1", "protein_name": "Kinesin-like protein KIF7", "gene_name": "KIF7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68CZ1-1", "protein_name": "Protein fantom", "gene_name": "RPGRIP1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N6U8-1", "protein_name": "G protein-coupled receptor 161", "gene_name": "GPR161", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13861-1", "protein_name": "cAMP-dependent protein kinase type II-alpha regulatory subunit", "gene_name": "PRKAR2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08151-1", "protein_name": "Transcription activator GLI1", "gene_name": "GLI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit alpha", "gene_name": "PRKACA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75386-1", "protein_name": "Tubby-related protein 3", "gene_name": "TULP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95622-1", "protein_name": "Adenylate cyclase type 5", "gene_name": "ADCY5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08828-1", "protein_name": "Adenylate cyclase type 1", "gene_name": "ADCY1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40145-1", "protein_name": "Adenylate cyclase type 8", "gene_name": "ADCY8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60266-1", "protein_name": "Adenylate cyclase type 3", "gene_name": "ADCY3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFM4-1", "protein_name": "Adenylate cyclase type 4", "gene_name": "ADCY4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31323-1", "protein_name": "cAMP-dependent protein kinase type II-beta regulatory subunit", "gene_name": "PRKAR2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31321-1", "protein_name": "cAMP-dependent protein kinase type I-beta regulatory subunit", "gene_name": "PRKAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75665-1", "protein_name": "Centriole and centriolar satellite protein OFD1", "gene_name": "OFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5SW45-1", "protein_name": "Tectonic-like complex member MKS1", "gene_name": "Mks1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BT04-1", "protein_name": "Protein fuzzy homolog", "gene_name": "FUZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10071-1", "protein_name": "Transcription activator GLI3", "gene_name": "GLI3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMX1-1", "protein_name": "Suppressor of fused homolog", "gene_name": "SUFU", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXB0-1", "protein_name": "Tectonic-like complex member MKS1", "gene_name": "MKS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10070-5", "protein_name": "Transcription activator GLI2", "gene_name": "GLI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60503-1", "protein_name": "Adenylate cyclase type 9", "gene_name": "ADCY9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PN6-1", "protein_name": "Adenylate cyclase type 10", "gene_name": "ADCY10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51828-1", "protein_name": "Adenylate cyclase type 7", "gene_name": "ADCY7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43306-1", "protein_name": "Adenylate cyclase type 6", "gene_name": "ADCY6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08462-1", "protein_name": "Adenylate cyclase type 2", "gene_name": "ADCY2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.19776033", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 57 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Electron-tomographic analysis of intraflagellar transport particle trains in situ.", "journal": "The Journal of cell biology", "date": "2009", "authors": "Pigino G, Geimer S, Lanzavecchia S, Paccagnini E, Cantele F, Diener DR, Rosenbaum JL, Lupetti P", "reference": { "type": "PubMed", "id": "19805633", "url": "https://pubmed.ncbi.nlm.nih.gov/19805633" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15066-1", "protein_name": "Kinesin-like protein KIF3B", "gene_name": "KIF3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BW83-1", "protein_name": "Intraflagellar transport protein 27 homolog", "gene_name": "IFT27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2H3-1", "protein_name": "Intraflagellar transport protein 80 homolog", "gene_name": "IFT80", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVS4-1", "protein_name": "Cytoplasmic dynein 2 intermediate 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{ "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0AVF1-1", "protein_name": "Intraflagellar transport protein 56", "gene_name": "IFT56", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WW35-1", "protein_name": "Dynein light chain Tctex-type protein 2B", "gene_name": "DYNLT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EX3-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 2", "gene_name": "DYNC2I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport protein 70A", "gene_name": "IFT70A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", 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"tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYA0-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "IFT81", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N7M0-1", "protein_name": "Dynein light chain Tctex-type 5", "gene_name": "DYNLT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZS6-1", "protein_name": "Dynein light chain Tctex-type protein 2", "gene_name": "DYNLT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15643-1", "protein_name": "Thyroid receptor-interacting protein 11", "gene_name": "TRIP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY31-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "IFT20", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.19805633", "abstract": 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"n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Planar cell polarity effector gene Fuzzy regulates cilia formation and Hedgehog signal transduction in mouse.", "journal": "Developmental dynamics : an official publication of the American Association of Anatomists", "date": "2009", "authors": "Heydeck W, Zeng H, Liu A", "reference": { "type": "PubMed", "id": "19877275", "url": "https://pubmed.ncbi.nlm.nih.gov/19877275" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22694-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit beta", "gene_name": "PRKACB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13635-1", "protein_name": "Protein patched homolog 1", "gene_name": "PTCH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5JWF2-1", "protein_name": "Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas", "gene_name": "GNAS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": 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"Q9ULD6-1", "protein_name": "Protein inturned", "gene_name": "INTU", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit gamma", "gene_name": "PRKACG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2M1P5-1", "protein_name": "Kinesin-like protein KIF7", "gene_name": "KIF7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3UYI6-1", "protein_name": "Protein fuzzy homolog", "gene_name": "Fuz", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q68CZ1-1", "protein_name": "Protein fantom", "gene_name": "RPGRIP1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N6U8-1", "protein_name": "G protein-coupled receptor 161", "gene_name": "GPR161", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13861-1", "protein_name": "cAMP-dependent protein kinase type II-alpha regulatory subunit", "gene_name": "PRKAR2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08151-1", "protein_name": "Transcription activator GLI1", "gene_name": "GLI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit alpha", "gene_name": "PRKACA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75386-1", "protein_name": "Tubby-related protein 3", "gene_name": "TULP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95622-1", "protein_name": "Adenylate cyclase type 5", "gene_name": "ADCY5", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.19877275", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 57 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Patched regulates Smoothened trafficking using lipoprotein-derived lipids.", "journal": "Development (Cambridge, England)", "date": "2009", "authors": "Khaliullina H, Panakova D, Eugster C, Riedel F, Carvalho M, Eaton S", "reference": { "type": "PubMed", "id": "19906846", "url": "https://pubmed.ncbi.nlm.nih.gov/19906846" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22694-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit beta", "gene_name": "PRKACB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13635-1", "protein_name": "Protein patched homolog 1", "gene_name": "PTCH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5JWF2-1", "protein_name": "Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas", "gene_name": "GNAS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99835-1", "protein_name": "Protein smoothened", "gene_name": "SMO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULD6-1", "protein_name": "Protein inturned", "gene_name": "INTU", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit gamma", "gene_name": "PRKACG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2M1P5-1", "protein_name": "Kinesin-like protein KIF7", "gene_name": "KIF7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68CZ1-1", "protein_name": "Protein fantom", "gene_name": "RPGRIP1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N6U8-1", "protein_name": "G protein-coupled receptor 161", "gene_name": "GPR161", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13861-1", "protein_name": "cAMP-dependent protein kinase type II-alpha regulatory subunit", "gene_name": "PRKAR2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08151-1", "protein_name": "Transcription activator GLI1", "gene_name": "GLI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit alpha", "gene_name": "PRKACA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75386-1", "protein_name": "Tubby-related protein 3", "gene_name": "TULP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95622-1", "protein_name": "Adenylate cyclase type 5", "gene_name": "ADCY5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08828-1", "protein_name": "Adenylate cyclase type 1", "gene_name": "ADCY1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40145-1", "protein_name": "Adenylate cyclase type 8", "gene_name": "ADCY8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60266-1", "protein_name": "Adenylate cyclase type 3", "gene_name": "ADCY3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFM4-1", "protein_name": "Adenylate cyclase type 4", "gene_name": "ADCY4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31323-1", "protein_name": "cAMP-dependent protein kinase type II-beta regulatory subunit", "gene_name": "PRKAR2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31321-1", "protein_name": "cAMP-dependent protein kinase type I-beta regulatory subunit", "gene_name": "PRKAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75665-1", "protein_name": "Centriole and centriolar satellite protein OFD1", "gene_name": "OFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BT04-1", "protein_name": "Protein fuzzy homolog", "gene_name": "FUZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10071-1", "protein_name": "Transcription activator GLI3", "gene_name": "GLI3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMX1-1", "protein_name": "Suppressor of fused homolog", "gene_name": "SUFU", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXB0-1", "protein_name": "Tectonic-like complex member MKS1", "gene_name": "MKS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10070-5", "protein_name": "Transcription activator GLI2", "gene_name": "GLI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60503-1", "protein_name": "Adenylate cyclase type 9", "gene_name": "ADCY9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PN6-1", "protein_name": "Adenylate cyclase type 10", "gene_name": "ADCY10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51828-1", "protein_name": "Adenylate cyclase type 7", "gene_name": "ADCY7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43306-1", "protein_name": "Adenylate cyclase type 6", "gene_name": "ADCY6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08462-1", "protein_name": "Adenylate cyclase type 2", "gene_name": "ADCY2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.19906846", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 56 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "PCP effector gene Inturned is an important regulator of cilia formation and embryonic development in mammals.", "journal": "Developmental biology", "date": "2010", "authors": "Zeng H, Hoover AN, Liu A", "reference": { "type": "PubMed", "id": "20067783", "url": "https://pubmed.ncbi.nlm.nih.gov/20067783" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22694-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit beta", "gene_name": "PRKACB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13635-1", "protein_name": "Protein patched homolog 1", "gene_name": "PTCH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5JWF2-1", "protein_name": "Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas", "gene_name": "GNAS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99835-1", "protein_name": "Protein smoothened", "gene_name": "SMO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULD6-1", "protein_name": "Protein inturned", "gene_name": "INTU", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit gamma", "gene_name": "PRKACG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2M1P5-1", "protein_name": "Kinesin-like protein KIF7", "gene_name": "KIF7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68CZ1-1", "protein_name": "Protein fantom", "gene_name": "RPGRIP1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N6U8-1", "protein_name": "G protein-coupled receptor 161", "gene_name": "GPR161", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13861-1", "protein_name": "cAMP-dependent protein kinase type II-alpha regulatory subunit", "gene_name": "PRKAR2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08151-1", "protein_name": "Transcription activator GLI1", "gene_name": "GLI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit alpha", "gene_name": "PRKACA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75386-1", "protein_name": "Tubby-related protein 3", "gene_name": "TULP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95622-1", "protein_name": "Adenylate cyclase type 5", "gene_name": "ADCY5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08828-1", "protein_name": "Adenylate cyclase type 1", "gene_name": "ADCY1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40145-1", "protein_name": "Adenylate cyclase type 8", "gene_name": "ADCY8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60266-1", "protein_name": "Adenylate cyclase type 3", "gene_name": "ADCY3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFM4-1", "protein_name": "Adenylate cyclase type 4", "gene_name": "ADCY4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31323-1", "protein_name": "cAMP-dependent protein kinase type II-beta regulatory subunit", "gene_name": "PRKAR2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31321-1", "protein_name": "cAMP-dependent protein kinase type I-beta regulatory subunit", "gene_name": "PRKAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75665-1", "protein_name": "Centriole and centriolar satellite protein OFD1", "gene_name": "OFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BT04-1", "protein_name": "Protein fuzzy homolog", "gene_name": "FUZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10071-1", "protein_name": "Transcription activator GLI3", "gene_name": "GLI3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMX1-1", "protein_name": "Suppressor of fused homolog", "gene_name": "SUFU", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXB0-1", "protein_name": "Tectonic-like complex member MKS1", "gene_name": "MKS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10070-5", "protein_name": "Transcription activator GLI2", "gene_name": "GLI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q059U7-1", "protein_name": "Protein inturned", "gene_name": "Intu", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60503-1", "protein_name": "Adenylate cyclase type 9", "gene_name": "ADCY9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PN6-1", "protein_name": "Adenylate cyclase type 10", "gene_name": "ADCY10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51828-1", "protein_name": "Adenylate cyclase type 7", "gene_name": "ADCY7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43306-1", "protein_name": "Adenylate cyclase type 6", "gene_name": "ADCY6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08462-1", "protein_name": "Adenylate cyclase type 2", "gene_name": "ADCY2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.20067783", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 57 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", 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"n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Naofen, a novel WD40-repeat protein, mediates spontaneous and tumor necrosis factor-induced apoptosis.", "journal": "Biochemical and biophysical research communications", "date": "2010", "authors": "Feng GG, Li C, Huang L, Tsunekawa K, Sato Y, Fujiwara Y, Komatsu T, Honda T, Fan JH, Goto H, Koide T, Hasegawa T, Ishikawa N", "reference": { "type": "PubMed", "id": "20193664", "url": "https://pubmed.ncbi.nlm.nih.gov/20193664" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6N6J5-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "Wdr35", "tax_name": "Rat" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": 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"sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Evaluating Smoothened as a G-protein-coupled receptor for Hedgehog signalling.", "journal": "Trends in cell biology", "date": "2010", "authors": "Ayers KL, Therond PP", "reference": { "type": "PubMed", "id": "20207148", "url": "https://pubmed.ncbi.nlm.nih.gov/20207148" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22694-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit beta", "gene_name": "PRKACB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13635-1", "protein_name": "Protein patched homolog 1", "gene_name": "PTCH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5JWF2-1", "protein_name": "Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas", "gene_name": "GNAS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99835-1", "protein_name": "Protein smoothened", "gene_name": "SMO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULD6-1", "protein_name": "Protein inturned", "gene_name": "INTU", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit gamma", "gene_name": "PRKACG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2M1P5-1", "protein_name": "Kinesin-like protein KIF7", "gene_name": "KIF7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68CZ1-1", "protein_name": "Protein fantom", "gene_name": "RPGRIP1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N6U8-1", "protein_name": "G protein-coupled receptor 161", "gene_name": "GPR161", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13861-1", "protein_name": "cAMP-dependent protein kinase type II-alpha regulatory subunit", "gene_name": "PRKAR2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08151-1", "protein_name": "Transcription activator GLI1", "gene_name": "GLI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit alpha", "gene_name": "PRKACA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75386-1", "protein_name": "Tubby-related protein 3", "gene_name": "TULP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95622-1", "protein_name": "Adenylate cyclase type 5", "gene_name": "ADCY5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08828-1", "protein_name": "Adenylate cyclase type 1", "gene_name": "ADCY1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40145-1", "protein_name": "Adenylate cyclase type 8", "gene_name": "ADCY8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60266-1", "protein_name": "Adenylate cyclase type 3", "gene_name": "ADCY3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFM4-1", "protein_name": "Adenylate cyclase type 4", "gene_name": "ADCY4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31323-1", "protein_name": "cAMP-dependent protein kinase type II-beta regulatory subunit", "gene_name": "PRKAR2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31321-1", "protein_name": "cAMP-dependent protein kinase type I-beta regulatory subunit", "gene_name": "PRKAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75665-1", "protein_name": "Centriole and centriolar satellite protein OFD1", "gene_name": "OFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": 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"protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60503-1", "protein_name": "Adenylate cyclase type 9", "gene_name": "ADCY9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PN6-1", "protein_name": "Adenylate cyclase type 10", "gene_name": "ADCY10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51828-1", "protein_name": "Adenylate cyclase type 7", "gene_name": "ADCY7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43306-1", "protein_name": "Adenylate cyclase type 6", "gene_name": "ADCY6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08462-1", "protein_name": "Adenylate cyclase type 2", "gene_name": "ADCY2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": 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"sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The primary cilium: a signalling centre during vertebrate development.", "journal": "Nature reviews. Genetics", "date": "2010", "authors": "Goetz SC, Anderson KV", "reference": { "type": "PubMed", "id": "20395968", "url": "https://pubmed.ncbi.nlm.nih.gov/20395968" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22694-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit beta", "gene_name": "PRKACB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13635-1", "protein_name": "Protein patched homolog 1", "gene_name": "PTCH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5JWF2-1", "protein_name": "Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas", "gene_name": "GNAS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin 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"Human" }, { "uniprot_canonical_ac": "P40145-1", "protein_name": "Adenylate cyclase type 8", "gene_name": "ADCY8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60266-1", "protein_name": "Adenylate cyclase type 3", "gene_name": "ADCY3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFM4-1", "protein_name": "Adenylate cyclase type 4", "gene_name": "ADCY4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31323-1", "protein_name": "cAMP-dependent protein kinase type II-beta regulatory subunit", "gene_name": "PRKAR2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31321-1", "protein_name": "cAMP-dependent protein kinase type I-beta regulatory subunit", "gene_name": "PRKAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75665-1", "protein_name": "Centriole and centriolar satellite protein OFD1", "gene_name": "OFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BT04-1", "protein_name": "Protein fuzzy homolog", "gene_name": "FUZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10071-1", "protein_name": "Transcription activator GLI3", "gene_name": "GLI3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMX1-1", "protein_name": "Suppressor of fused homolog", "gene_name": "SUFU", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXB0-1", "protein_name": "Tectonic-like complex member MKS1", "gene_name": "MKS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10070-5", "protein_name": "Transcription activator GLI2", "gene_name": "GLI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", 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"authors": "Mas C, Ruiz i Altaba A", "reference": { "type": "PubMed", "id": "20412786", "url": "https://pubmed.ncbi.nlm.nih.gov/20412786" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22694-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit beta", "gene_name": "PRKACB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13635-1", "protein_name": "Protein patched homolog 1", "gene_name": "PTCH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5JWF2-1", "protein_name": "Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas", "gene_name": "GNAS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": 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"uniprot_canonical_ac": "P40145-1", "protein_name": "Adenylate cyclase type 8", "gene_name": "ADCY8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60266-1", "protein_name": "Adenylate cyclase type 3", "gene_name": "ADCY3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFM4-1", "protein_name": "Adenylate cyclase type 4", "gene_name": "ADCY4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31323-1", "protein_name": "cAMP-dependent protein kinase type II-beta regulatory subunit", "gene_name": "PRKAR2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31321-1", "protein_name": "cAMP-dependent protein kinase type I-beta regulatory subunit", "gene_name": "PRKAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75665-1", "protein_name": "Centriole and centriolar satellite protein OFD1", "gene_name": "OFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": 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"tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60503-1", "protein_name": "Adenylate cyclase type 9", "gene_name": "ADCY9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PN6-1", "protein_name": "Adenylate cyclase type 10", "gene_name": "ADCY10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51828-1", "protein_name": "Adenylate cyclase type 7", "gene_name": "ADCY7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43306-1", "protein_name": "Adenylate cyclase type 6", "gene_name": "ADCY6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08462-1", "protein_name": "Adenylate cyclase type 2", "gene_name": "ADCY2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.20412786", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 56 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Direct interactions of intraflagellar transport complex B proteins IFT88, IFT52, and IFT46.", "journal": "The Journal of biological chemistry", "date": "2010", "authors": "Lucker BF, Miller MS, Dziedzic SA, Blackmarr PT, Cole DG", "reference": { "type": "PubMed", "id": "20435895", "url": "https://pubmed.ncbi.nlm.nih.gov/20435895" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15066-1", "protein_name": "Kinesin-like protein KIF3B", "gene_name": "KIF3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BW83-1", "protein_name": "Intraflagellar transport protein 27 homolog", "gene_name": "IFT27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2H3-1", "protein_name": "Intraflagellar transport protein 80 homolog", "gene_name": "IFT80", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVS4-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 1", "gene_name": "DYNC2I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDR0-1", "protein_name": "TRAF3-interacting protein 1", "gene_name": "TRAF3IP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ1-1", "protein_name": "Clusterin-associated protein 1", "gene_name": "CLUAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCX1-1", "protein_name": "Cytoplasmic dynein 2 light intermediate chain 1", "gene_name": "DYNC2LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP97-1", "protein_name": "Dynein light chain roadblock-type 1", "gene_name": "DYNLRB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14782-1", "protein_name": "Kinesin-like protein KIF3C", "gene_name": "KIF3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92845-1", "protein_name": "Kinesin-associated protein 3", "gene_name": "KIFAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0AVF1-1", "protein_name": "Intraflagellar transport protein 56", "gene_name": "IFT56", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WW35-1", "protein_name": "Dynein light chain Tctex-type protein 2B", "gene_name": "DYNLT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EX3-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 2", "gene_name": "DYNC2I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport protein 70A", "gene_name": "IFT70A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7X7-1", "protein_name": "Intraflagellar transport protein 22 homolog", "gene_name": "IFT22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y547-1", "protein_name": "Intraflagellar transport protein 25 homolog", "gene_name": "IFT25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYA0-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "IFT81", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N7M0-1", "protein_name": "Dynein light chain Tctex-type 5", "gene_name": "DYNLT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZS6-1", "protein_name": "Dynein light chain Tctex-type protein 2", "gene_name": "DYNLT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15643-1", "protein_name": "Thyroid receptor-interacting protein 11", "gene_name": "TRIP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY31-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "IFT20", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.20435895", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 54 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ 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"o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Nuclear transport receptor goes moonlighting.", "journal": "Nature cell biology", "date": "2010", "authors": "Gruss OJ", "reference": { "type": "PubMed", "id": "20526327", "url": "https://pubmed.ncbi.nlm.nih.gov/20526327" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15066-1", "protein_name": "Kinesin-like protein KIF3B", "gene_name": "KIF3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BW83-1", "protein_name": "Intraflagellar transport protein 27 homolog", "gene_name": "IFT27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2H3-1", "protein_name": "Intraflagellar transport protein 80 homolog", "gene_name": "IFT80", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVS4-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 1", "gene_name": "DYNC2I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDR0-1", "protein_name": "TRAF3-interacting protein 1", "gene_name": "TRAF3IP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ1-1", "protein_name": "Clusterin-associated protein 1", "gene_name": "CLUAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCX1-1", "protein_name": "Cytoplasmic dynein 2 light intermediate chain 1", "gene_name": "DYNC2LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP97-1", "protein_name": "Dynein light chain roadblock-type 1", "gene_name": "DYNLRB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14782-1", "protein_name": "Kinesin-like protein KIF3C", "gene_name": "KIF3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92845-1", "protein_name": "Kinesin-associated protein 3", "gene_name": "KIFAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0AVF1-1", "protein_name": "Intraflagellar transport protein 56", "gene_name": "IFT56", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WW35-1", "protein_name": "Dynein light chain Tctex-type protein 2B", "gene_name": "DYNLT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EX3-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 2", "gene_name": "DYNC2I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport protein 70A", "gene_name": "IFT70A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7X7-1", "protein_name": "Intraflagellar transport protein 22 homolog", "gene_name": "IFT22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y547-1", "protein_name": "Intraflagellar transport protein 25 homolog", "gene_name": "IFT25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYA0-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "IFT81", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N7M0-1", "protein_name": "Dynein light chain Tctex-type 5", "gene_name": "DYNLT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZS6-1", "protein_name": "Dynein light chain Tctex-type protein 2", "gene_name": "DYNLT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15643-1", "protein_name": "Thyroid receptor-interacting protein 11", "gene_name": "TRIP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY31-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "IFT20", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.20526327", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 54 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Ciliary entry of the kinesin-2 motor KIF17 is regulated by importin-beta2 and RanGTP.", "journal": "Nature cell biology", "date": "2010", "authors": "Dishinger JF, Kee HL, Jenkins PM, Fan S, Hurd TW, Hammond JW, Truong YN, Margolis B, Martens JR, Verhey KJ", "reference": { "type": "PubMed", "id": "20526328", "url": "https://pubmed.ncbi.nlm.nih.gov/20526328" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15066-1", "protein_name": "Kinesin-like protein KIF3B", "gene_name": "KIF3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BW83-1", "protein_name": "Intraflagellar transport protein 27 homolog", "gene_name": "IFT27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2H3-1", "protein_name": "Intraflagellar transport protein 80 homolog", "gene_name": "IFT80", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVS4-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 1", "gene_name": "DYNC2I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDR0-1", "protein_name": "TRAF3-interacting protein 1", "gene_name": "TRAF3IP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ1-1", "protein_name": "Clusterin-associated protein 1", "gene_name": "CLUAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCX1-1", "protein_name": "Cytoplasmic dynein 2 light intermediate chain 1", "gene_name": "DYNC2LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP97-1", "protein_name": "Dynein light chain roadblock-type 1", "gene_name": "DYNLRB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14782-1", "protein_name": "Kinesin-like protein KIF3C", "gene_name": "KIF3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92845-1", "protein_name": "Kinesin-associated protein 3", "gene_name": "KIFAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0AVF1-1", "protein_name": "Intraflagellar transport protein 56", "gene_name": "IFT56", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WW35-1", "protein_name": "Dynein light chain Tctex-type protein 2B", "gene_name": "DYNLT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EX3-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 2", "gene_name": "DYNC2I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport protein 70A", "gene_name": "IFT70A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7X7-1", "protein_name": "Intraflagellar transport protein 22 homolog", "gene_name": "IFT22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y547-1", "protein_name": "Intraflagellar transport protein 25 homolog", "gene_name": "IFT25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYA0-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "IFT81", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N7M0-1", "protein_name": "Dynein light chain Tctex-type 5", "gene_name": "DYNLT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZS6-1", "protein_name": "Dynein light chain Tctex-type protein 2", "gene_name": "DYNLT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15643-1", "protein_name": "Thyroid receptor-interacting protein 11", "gene_name": "TRIP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY31-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "IFT20", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.20526328", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 54 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The small GTPases ARL-13 and ARL-3 coordinate intraflagellar transport and ciliogenesis.", "journal": "The Journal of cell biology", "date": "2010", "authors": "Li Y, Wei Q, Zhang Y, Ling K, Hu J", "reference": { "type": "PubMed", "id": "20530210", "url": "https://pubmed.ncbi.nlm.nih.gov/20530210" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15066-1", "protein_name": "Kinesin-like protein KIF3B", "gene_name": "KIF3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BW83-1", "protein_name": "Intraflagellar transport protein 27 homolog", "gene_name": "IFT27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2H3-1", "protein_name": "Intraflagellar transport protein 80 homolog", "gene_name": "IFT80", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVS4-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 1", "gene_name": "DYNC2I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDR0-1", "protein_name": "TRAF3-interacting protein 1", "gene_name": "TRAF3IP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ1-1", "protein_name": "Clusterin-associated protein 1", "gene_name": "CLUAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCX1-1", "protein_name": "Cytoplasmic dynein 2 light intermediate chain 1", "gene_name": "DYNC2LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP97-1", "protein_name": "Dynein light chain roadblock-type 1", "gene_name": "DYNLRB1", 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light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WW35-1", "protein_name": "Dynein light chain Tctex-type protein 2B", "gene_name": "DYNLT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EX3-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 2", "gene_name": "DYNC2I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport protein 70A", "gene_name": "IFT70A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7X7-1", "protein_name": "Intraflagellar transport protein 22 homolog", "gene_name": "IFT22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y547-1", "protein_name": "Intraflagellar transport protein 25 homolog", "gene_name": "IFT25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYA0-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "IFT81", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N7M0-1", "protein_name": "Dynein light chain Tctex-type 5", "gene_name": "DYNLT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZS6-1", "protein_name": "Dynein light chain Tctex-type protein 2", "gene_name": "DYNLT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15643-1", "protein_name": "Thyroid receptor-interacting protein 11", "gene_name": "TRIP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY31-1", "protein_name": 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Exome sequencing identifies WDR35 variants involved in Sensenbrenner syndrome.", "journal": "American journal of human genetics", "date": "2010", "authors": "Gilissen C, Arts HH, Hoischen A, Spruijt L, Mans DA, Arts P, van Lier B, Steehouwer M, van Reeuwijk J, Kant SG, Roepman R, Knoers NV, Veltman JA, Brunner HG", "reference": { "type": "PubMed", "id": "20817137", "url": "https://pubmed.ncbi.nlm.nih.gov/20817137" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.20817137", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } 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"Homo sapiens [9606]" } ], "record_id": "pubmed.2105456", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 56 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Intraflagellar transport protein 122 antagonizes Sonic Hedgehog signaling and controls ciliary localization of pathway components.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2011", "authors": "Qin J, Lin Y, Norman RX, Ko HW, Eggenschwiler JT", "reference": { "type": "PubMed", "id": "21209331", "url": "https://pubmed.ncbi.nlm.nih.gov/21209331" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22694-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit beta", "gene_name": "PRKACB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13635-1", "protein_name": "Protein patched homolog 1", "gene_name": "PTCH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5JWF2-1", "protein_name": "Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas", "gene_name": "GNAS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99835-1", "protein_name": "Protein smoothened", "gene_name": "SMO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULD6-1", "protein_name": "Protein inturned", "gene_name": "INTU", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit gamma", "gene_name": "PRKACG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2M1P5-1", "protein_name": "Kinesin-like protein KIF7", "gene_name": "KIF7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O88413-1", "protein_name": "Tubby-related protein 3", "gene_name": "Tulp3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q68CZ1-1", "protein_name": "Protein fantom", "gene_name": "RPGRIP1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N6U8-1", "protein_name": "G protein-coupled receptor 161", "gene_name": "GPR161", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13861-1", "protein_name": "cAMP-dependent protein kinase type II-alpha regulatory subunit", "gene_name": "PRKAR2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08151-1", "protein_name": "Transcription activator GLI1", "gene_name": "GLI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit alpha", "gene_name": "PRKACA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75386-1", "protein_name": "Tubby-related protein 3", "gene_name": "TULP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95622-1", "protein_name": "Adenylate cyclase type 5", "gene_name": "ADCY5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08828-1", "protein_name": "Adenylate cyclase type 1", "gene_name": "ADCY1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40145-1", "protein_name": "Adenylate cyclase type 8", "gene_name": "ADCY8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60266-1", "protein_name": "Adenylate cyclase type 3", "gene_name": "ADCY3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFM4-1", "protein_name": "Adenylate cyclase type 4", "gene_name": "ADCY4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31323-1", "protein_name": "cAMP-dependent protein kinase type II-beta regulatory subunit", "gene_name": "PRKAR2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31321-1", "protein_name": "cAMP-dependent protein kinase type I-beta regulatory subunit", "gene_name": "PRKAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75665-1", "protein_name": "Centriole and centriolar satellite protein OFD1", "gene_name": "OFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6NWV3-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "Ift122", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BT04-1", "protein_name": "Protein fuzzy homolog", "gene_name": "FUZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10071-1", "protein_name": "Transcription activator GLI3", "gene_name": "GLI3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMX1-1", "protein_name": "Suppressor of fused homolog", "gene_name": "SUFU", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXB0-1", "protein_name": "Tectonic-like complex member MKS1", "gene_name": "MKS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10070-5", "protein_name": "Transcription activator GLI2", "gene_name": "GLI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60503-1", "protein_name": "Adenylate cyclase type 9", "gene_name": "ADCY9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PN6-1", "protein_name": "Adenylate cyclase type 10", "gene_name": "ADCY10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51828-1", "protein_name": "Adenylate cyclase type 7", "gene_name": "ADCY7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43306-1", "protein_name": "Adenylate cyclase type 6", "gene_name": "ADCY6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08462-1", "protein_name": "Adenylate cyclase type 2", "gene_name": "ADCY2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.21209331", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 58 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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"count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Ciliogenesis: building the cell's antenna.", "journal": "Nature reviews. Molecular cell biology", "date": "2011", "authors": "Ishikawa H, Marshall WF", "reference": { "type": "PubMed", "id": "21427764", "url": "https://pubmed.ncbi.nlm.nih.gov/21427764" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15066-1", "protein_name": "Kinesin-like protein KIF3B", "gene_name": "KIF3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BW83-1", "protein_name": "Intraflagellar transport protein 27 homolog", "gene_name": "IFT27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49368-1", "protein_name": "T-complex protein 1 subunit gamma", "gene_name": "CCT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2H3-1", "protein_name": "Intraflagellar transport protein 80 homolog", "gene_name": "IFT80", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50991-1", "protein_name": "T-complex protein 1 subunit delta", "gene_name": "CCT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVS4-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 1", "gene_name": "DYNC2I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32745-1", "protein_name": "Somatostatin receptor type 3", "gene_name": "SSTR3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99835-1", "protein_name": "Protein smoothened", "gene_name": "SMO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3SYG4-1", "protein_name": "Protein PTHB1", "gene_name": "BBS9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N3I7-1", "protein_name": "BBSome complex member BBS5", "gene_name": "BBS5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDR0-1", "protein_name": "TRAF3-interacting protein 1", "gene_name": "TRAF3IP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0F7-1", "protein_name": "ADP-ribosylation factor-like protein 6", "gene_name": "ARL6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ1-1", "protein_name": "Clusterin-associated protein 1", "gene_name": "CLUAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCX1-1", "protein_name": "Cytoplasmic dynein 2 light intermediate chain 1", "gene_name": "DYNC2LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP97-1", "protein_name": "Dynein light chain roadblock-type 1", "gene_name": "DYNLRB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14782-1", "protein_name": "Kinesin-like protein KIF3C", "gene_name": "KIF3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TAM2-1", "protein_name": "Tetratricopeptide repeat protein 8", "gene_name": "TTC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92845-1", "protein_name": "Kinesin-associated protein 3", "gene_name": "KIFAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17987-1", "protein_name": "T-complex protein 1 subunit alpha", "gene_name": "TCP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0AVF1-1", "protein_name": "Intraflagellar transport protein 56", "gene_name": "IFT56", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFJ9-1", "protein_name": "BBSome complex 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"Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7X7-1", "protein_name": "Intraflagellar transport protein 22 homolog", "gene_name": "IFT22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y547-1", "protein_name": 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Hall EA, Reijns MA, Keighren M, Bahlo M, Bromhead CJ, Budd P, Aftimos S, Delatycki MB, Savarirayan R, Jackson IJ, Amor DJ", "reference": { "type": "PubMed", "id": "21473986", "url": "https://pubmed.ncbi.nlm.nih.gov/21473986" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8BND3-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "Wdr35", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.21473986", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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"tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": 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"Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYA0-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "IFT81", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N7M0-1", "protein_name": "Dynein light chain Tctex-type 5", "gene_name": "DYNLT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZS6-1", "protein_name": "Dynein light chain Tctex-type protein 2", "gene_name": "DYNLT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15643-1", "protein_name": "Thyroid receptor-interacting protein 11", "gene_name": "TRIP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY31-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "IFT20", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.21936775", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 54 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Architecture and function of IFT complex proteins in ciliogenesis.", "journal": "Differentiation; research in biological diversity", "date": "2012", "authors": "Taschner M, Bhogaraju S, Lorentzen E", "reference": { "type": "PubMed", "id": "22118932", "url": "https://pubmed.ncbi.nlm.nih.gov/22118932" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15066-1", "protein_name": "Kinesin-like protein KIF3B", "gene_name": "KIF3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BW83-1", "protein_name": "Intraflagellar transport protein 27 homolog", "gene_name": "IFT27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2H3-1", "protein_name": "Intraflagellar transport protein 80 homolog", "gene_name": "IFT80", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVS4-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 1", "gene_name": "DYNC2I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDR0-1", "protein_name": "TRAF3-interacting protein 1", "gene_name": "TRAF3IP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ1-1", "protein_name": "Clusterin-associated protein 1", "gene_name": "CLUAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCX1-1", "protein_name": "Cytoplasmic dynein 2 light intermediate chain 1", "gene_name": "DYNC2LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP97-1", "protein_name": "Dynein light chain roadblock-type 1", "gene_name": "DYNLRB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14782-1", "protein_name": "Kinesin-like protein KIF3C", "gene_name": "KIF3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92845-1", "protein_name": "Kinesin-associated protein 3", "gene_name": "KIFAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0AVF1-1", "protein_name": "Intraflagellar transport protein 56", "gene_name": "IFT56", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WW35-1", "protein_name": "Dynein light chain Tctex-type protein 2B", "gene_name": "DYNLT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EX3-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 2", "gene_name": "DYNC2I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport protein 70A", "gene_name": "IFT70A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7X7-1", "protein_name": "Intraflagellar transport protein 22 homolog", "gene_name": "IFT22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y547-1", "protein_name": "Intraflagellar transport protein 25 homolog", "gene_name": "IFT25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYA0-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "IFT81", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N7M0-1", "protein_name": "Dynein light chain Tctex-type 5", "gene_name": "DYNLT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZS6-1", "protein_name": "Dynein light chain Tctex-type protein 2", "gene_name": "DYNLT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15643-1", "protein_name": "Thyroid receptor-interacting protein 11", "gene_name": "TRIP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY31-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "IFT20", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.22118932", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 54 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { 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"total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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patched homolog 1", "gene_name": "PTCH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5JWF2-1", "protein_name": "Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas", "gene_name": "GNAS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99835-1", "protein_name": "Protein smoothened", "gene_name": "SMO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULD6-1", "protein_name": "Protein inturned", "gene_name": "INTU", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit gamma", "gene_name": "PRKACG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2M1P5-1", "protein_name": "Kinesin-like protein KIF7", "gene_name": "KIF7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68CZ1-1", "protein_name": "Protein fantom", "gene_name": "RPGRIP1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N6U8-1", "protein_name": "G protein-coupled receptor 161", "gene_name": "GPR161", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13861-1", "protein_name": "cAMP-dependent protein kinase type II-alpha regulatory subunit", "gene_name": "PRKAR2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08151-1", "protein_name": "Transcription activator GLI1", "gene_name": "GLI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17612-1", "protein_name": "cAMP-dependent protein kinase catalytic 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"uniprot_canonical_ac": "P31323-1", "protein_name": "cAMP-dependent protein kinase type II-beta regulatory subunit", "gene_name": "PRKAR2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56726-1", "protein_name": "Protein smoothened", "gene_name": "Smo", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31321-1", "protein_name": "cAMP-dependent protein kinase type I-beta regulatory subunit", "gene_name": "PRKAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75665-1", "protein_name": "Centriole and centriolar satellite protein OFD1", "gene_name": "OFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BT04-1", "protein_name": "Protein fuzzy homolog", "gene_name": "FUZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10071-1", "protein_name": "Transcription activator GLI3", "gene_name": "GLI3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMX1-1", "protein_name": "Suppressor of fused homolog", "gene_name": "SUFU", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXB0-1", "protein_name": "Tectonic-like complex member MKS1", "gene_name": "MKS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10070-5", "protein_name": "Transcription activator GLI2", "gene_name": "GLI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60503-1", "protein_name": "Adenylate cyclase type 9", "gene_name": "ADCY9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PN6-1", "protein_name": "Adenylate cyclase type 10", "gene_name": "ADCY10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51828-1", "protein_name": "Adenylate cyclase type 7", "gene_name": "ADCY7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43306-1", "protein_name": "Adenylate cyclase type 6", "gene_name": "ADCY6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08462-1", "protein_name": "Adenylate cyclase type 2", "gene_name": "ADCY2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.22231273", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 57 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Gli protein nuclear localization signal.", "journal": "Vitamins and hormones", "date": "2012", "authors": "Hatayama M, Aruga J", "reference": { "type": "PubMed", "id": "22391300", "url": "https://pubmed.ncbi.nlm.nih.gov/22391300" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22694-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit beta", "gene_name": "PRKACB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13635-1", "protein_name": "Protein patched homolog 1", "gene_name": "PTCH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5JWF2-1", "protein_name": "Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas", "gene_name": "GNAS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99835-1", "protein_name": "Protein smoothened", "gene_name": "SMO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULD6-1", "protein_name": "Protein inturned", "gene_name": "INTU", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit gamma", "gene_name": "PRKACG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2M1P5-1", "protein_name": "Kinesin-like protein KIF7", "gene_name": "KIF7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68CZ1-1", "protein_name": "Protein fantom", "gene_name": "RPGRIP1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N6U8-1", "protein_name": "G protein-coupled receptor 161", "gene_name": "GPR161", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13861-1", "protein_name": "cAMP-dependent protein kinase type II-alpha regulatory subunit", "gene_name": "PRKAR2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08151-1", "protein_name": "Transcription activator GLI1", "gene_name": "GLI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit alpha", "gene_name": "PRKACA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75386-1", "protein_name": "Tubby-related protein 3", "gene_name": "TULP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95622-1", "protein_name": "Adenylate cyclase type 5", "gene_name": "ADCY5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08828-1", "protein_name": "Adenylate cyclase type 1", "gene_name": "ADCY1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40145-1", "protein_name": "Adenylate cyclase type 8", "gene_name": "ADCY8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60266-1", "protein_name": "Adenylate cyclase type 3", "gene_name": "ADCY3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFM4-1", "protein_name": "Adenylate cyclase type 4", "gene_name": "ADCY4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31323-1", "protein_name": "cAMP-dependent protein kinase type II-beta regulatory subunit", "gene_name": "PRKAR2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31321-1", "protein_name": "cAMP-dependent protein kinase type I-beta regulatory subunit", "gene_name": "PRKAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75665-1", "protein_name": "Centriole and centriolar satellite protein OFD1", "gene_name": "OFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BT04-1", "protein_name": "Protein fuzzy homolog", "gene_name": "FUZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10071-1", "protein_name": "Transcription activator GLI3", "gene_name": "GLI3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMX1-1", "protein_name": "Suppressor of fused homolog", "gene_name": "SUFU", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXB0-1", "protein_name": "Tectonic-like complex member MKS1", "gene_name": "MKS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10070-5", "protein_name": "Transcription activator GLI2", "gene_name": "GLI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60503-1", "protein_name": "Adenylate cyclase type 9", "gene_name": "ADCY9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PN6-1", "protein_name": "Adenylate cyclase type 10", "gene_name": "ADCY10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51828-1", "protein_name": "Adenylate cyclase type 7", "gene_name": "ADCY7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43306-1", "protein_name": "Adenylate cyclase type 6", "gene_name": "ADCY6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08462-1", "protein_name": "Adenylate cyclase type 2", "gene_name": "ADCY2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.22391300", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 56 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { 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"uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYA0-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "IFT81", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N7M0-1", "protein_name": "Dynein light chain Tctex-type 5", "gene_name": "DYNLT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZS6-1", "protein_name": "Dynein light chain Tctex-type protein 2", "gene_name": "DYNLT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15643-1", "protein_name": "Thyroid receptor-interacting protein 11", "gene_name": "TRIP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY31-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "IFT20", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.22992454", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 54 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The cyclic AMP pathway.", "journal": "Cold Spring Harbor perspectives in biology", "date": "2012", "authors": "Sassone-Corsi P", "reference": { "type": "PubMed", "id": "23209152", "url": "https://pubmed.ncbi.nlm.nih.gov/23209152" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22694-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit beta", "gene_name": "PRKACB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13635-1", "protein_name": "Protein patched homolog 1", "gene_name": "PTCH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5JWF2-1", "protein_name": "Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas", "gene_name": "GNAS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99835-1", "protein_name": "Protein smoothened", "gene_name": "SMO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULD6-1", "protein_name": "Protein inturned", "gene_name": "INTU", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit gamma", "gene_name": "PRKACG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2M1P5-1", "protein_name": "Kinesin-like protein KIF7", "gene_name": "KIF7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68CZ1-1", "protein_name": "Protein fantom", "gene_name": "RPGRIP1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N6U8-1", "protein_name": "G protein-coupled receptor 161", "gene_name": "GPR161", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13861-1", "protein_name": "cAMP-dependent protein kinase type II-alpha regulatory subunit", "gene_name": "PRKAR2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08151-1", "protein_name": "Transcription activator GLI1", "gene_name": "GLI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit alpha", "gene_name": "PRKACA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75386-1", "protein_name": "Tubby-related protein 3", "gene_name": "TULP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95622-1", "protein_name": "Adenylate cyclase type 5", "gene_name": "ADCY5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08828-1", "protein_name": "Adenylate cyclase type 1", "gene_name": "ADCY1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40145-1", "protein_name": "Adenylate cyclase type 8", "gene_name": "ADCY8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60266-1", "protein_name": "Adenylate cyclase type 3", "gene_name": "ADCY3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFM4-1", "protein_name": "Adenylate cyclase type 4", "gene_name": "ADCY4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31323-1", "protein_name": "cAMP-dependent protein kinase type II-beta regulatory subunit", "gene_name": "PRKAR2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31321-1", "protein_name": "cAMP-dependent protein kinase type I-beta regulatory subunit", "gene_name": "PRKAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75665-1", "protein_name": "Centriole and centriolar satellite protein OFD1", "gene_name": "OFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BT04-1", "protein_name": "Protein fuzzy homolog", "gene_name": "FUZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10071-1", "protein_name": "Transcription activator GLI3", "gene_name": "GLI3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMX1-1", "protein_name": "Suppressor of fused homolog", "gene_name": "SUFU", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXB0-1", "protein_name": "Tectonic-like complex member MKS1", "gene_name": "MKS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10070-5", "protein_name": "Transcription activator GLI2", "gene_name": "GLI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60503-1", "protein_name": "Adenylate cyclase type 9", "gene_name": "ADCY9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PN6-1", "protein_name": "Adenylate cyclase type 10", "gene_name": "ADCY10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51828-1", "protein_name": "Adenylate cyclase type 7", "gene_name": "ADCY7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43306-1", "protein_name": "Adenylate cyclase type 6", "gene_name": "ADCY6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08462-1", "protein_name": "Adenylate cyclase type 2", "gene_name": "ADCY2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.23209152", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 56 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", 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"n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Intraflagellar transport complex structure and cargo interactions.", "journal": "Cilia", "date": "2013", "authors": "Bhogaraju S, Engel BD, Lorentzen E", "reference": { "type": "PubMed", "id": "23945166", "url": "https://pubmed.ncbi.nlm.nih.gov/23945166" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15066-1", "protein_name": "Kinesin-like protein KIF3B", "gene_name": "KIF3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULH1-1", "protein_name": "Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1", "gene_name": "ASAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00471-1", "protein_name": "Exocyst complex component 5", "gene_name": "EXOC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96KP1-1", "protein_name": "Exocyst complex component 2", "gene_name": "EXOC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BW83-1", "protein_name": "Intraflagellar transport protein 27 homolog", "gene_name": "IFT27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13563-1", "protein_name": "Polycystin-2", "gene_name": "PKD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62491-1", "protein_name": "Ras-related protein Rab-11A", "gene_name": "RAB11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV77-1", "protein_name": "Cyclic nucleotide-gated channel alpha-4", "gene_name": "CNGA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08100-1", "protein_name": "Rhodopsin", "gene_name": "RHO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2H3-1", "protein_name": "Intraflagellar transport protein 80 homolog", "gene_name": "IFT80", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVS4-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 1", "gene_name": "DYNC2I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75154-1", "protein_name": "Rab11 family-interacting protein 3", "gene_name": "RAB11FIP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDR0-1", "protein_name": "TRAF3-interacting protein 1", "gene_name": "TRAF3IP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ1-1", "protein_name": "Clusterin-associated protein 1", "gene_name": "CLUAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14028-1", "protein_name": "Cyclic nucleotide-gated channel beta-1", "gene_name": "CNGB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCX1-1", "protein_name": "Cytoplasmic dynein 2 light intermediate chain 1", "gene_name": "DYNC2LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP97-1", "protein_name": "Dynein light chain roadblock-type 1", "gene_name": "DYNLRB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14782-1", "protein_name": "Kinesin-like protein KIF3C", "gene_name": "KIF3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92845-1", "protein_name": "Kinesin-associated protein 3", "gene_name": "KIFAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0AVF1-1", "protein_name": "Intraflagellar transport protein 56", "gene_name": "IFT56", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18085-1", "protein_name": "ADP-ribosylation factor 4", "gene_name": "ARF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WW35-1", "protein_name": "Dynein light chain Tctex-type protein 2B", "gene_name": 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"tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IYI6-1", "protein_name": "Exocyst complex component 8", "gene_name": "EXOC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A65-1", "protein_name": "Exocyst complex component 4", "gene_name": "EXOC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { 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"protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P98161-1", "protein_name": "Polycystin-1", "gene_name": "PKD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60645-1", "protein_name": "Exocyst complex component 3", "gene_name": "EXOC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPT5-3", "protein_name": "Exocyst complex component 7", "gene_name": "EXOC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NV70-1", "protein_name": "Exocyst complex component 1", "gene_name": "EXOC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYA0-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "IFT81", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TAG9-1", "protein_name": "Exocyst complex component 6", "gene_name": "EXOC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N7M0-1", "protein_name": "Dynein light chain Tctex-type 5", "gene_name": "DYNLT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZS6-1", "protein_name": "Dynein light chain Tctex-type protein 2", "gene_name": "DYNLT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15643-1", "protein_name": "Thyroid receptor-interacting protein 11", "gene_name": "TRIP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY31-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "IFT20", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.23945166", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 75 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"KIF3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BW83-1", "protein_name": "Intraflagellar transport protein 27 homolog", "gene_name": "IFT27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2H3-1", "protein_name": "Intraflagellar transport protein 80 homolog", "gene_name": "IFT80", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVS4-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 1", "gene_name": "DYNC2I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDR0-1", "protein_name": "TRAF3-interacting protein 1", "gene_name": "TRAF3IP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ1-1", "protein_name": "Clusterin-associated protein 1", "gene_name": "CLUAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCX1-1", "protein_name": "Cytoplasmic dynein 2 light intermediate chain 1", "gene_name": "DYNC2LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP97-1", "protein_name": "Dynein light chain roadblock-type 1", "gene_name": "DYNLRB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14782-1", "protein_name": "Kinesin-like protein KIF3C", "gene_name": "KIF3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92845-1", "protein_name": "Kinesin-associated protein 3", "gene_name": "KIFAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0AVF1-1", "protein_name": "Intraflagellar transport protein 56", "gene_name": "IFT56", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WW35-1", "protein_name": "Dynein light chain Tctex-type protein 2B", "gene_name": "DYNLT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EX3-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 2", "gene_name": "DYNC2I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport protein 70A", "gene_name": "IFT70A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7X7-1", "protein_name": "Intraflagellar transport protein 22 homolog", "gene_name": "IFT22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y547-1", "protein_name": "Intraflagellar transport protein 25 homolog", "gene_name": "IFT25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Defects in the IFT-B component IFT172 cause Jeune and Mainzer-Saldino syndromes in humans.", "journal": "American journal of human genetics", "date": "2013", "authors": "Halbritter J, Bizet AA, Schmidts M, Porath JD, Braun DA, Gee HY, McInerney-Leo AM, Krug P, Filhol E, Davis EE, Airik R, Czarnecki PG, Lehman AM, Trnka P, Nitschke P, Bole-Feysot C, Schueler M, Knebelmann B, Burtey S, Szabo AJ, Tory K, Leo PJ, Gardiner B, McKenzie FA, Zankl A, Brown MA, Hartley JL, Maher ER, Li C, Leroux MR, Scambler PJ, Zhan SH, Jones SJ, Kayserili H, Tuysuz B, Moorani KN, Constantinescu A, Krantz ID, Kaplan BS, Shah JV, Hurd TW, Doherty D, Katsanis N, Duncan EL, Otto EA, Beales PL, Mitchison HM, Saunier S, Hildebrandt F", "reference": { "type": "PubMed", "id": "24140113", "url": "https://pubmed.ncbi.nlm.nih.gov/24140113" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15066-1", "protein_name": "Kinesin-like protein KIF3B", "gene_name": "KIF3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5RHH4-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "ift172", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9BW83-1", "protein_name": "Intraflagellar transport protein 27 homolog", "gene_name": "IFT27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2H3-1", "protein_name": "Intraflagellar transport protein 80 homolog", "gene_name": "IFT80", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVS4-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 1", "gene_name": "DYNC2I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDR0-1", "protein_name": "TRAF3-interacting protein 1", "gene_name": "TRAF3IP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ1-1", "protein_name": "Clusterin-associated protein 1", "gene_name": "CLUAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCX1-1", "protein_name": "Cytoplasmic dynein 2 light intermediate chain 1", "gene_name": "DYNC2LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP97-1", "protein_name": "Dynein light chain roadblock-type 1", "gene_name": "DYNLRB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14782-1", "protein_name": "Kinesin-like protein KIF3C", "gene_name": "KIF3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92845-1", "protein_name": "Kinesin-associated protein 3", "gene_name": "KIFAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0AVF1-1", "protein_name": "Intraflagellar transport protein 56", "gene_name": "IFT56", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WW35-1", "protein_name": "Dynein light chain Tctex-type protein 2B", "gene_name": "DYNLT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EX3-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 2", "gene_name": "DYNC2I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport protein 70A", "gene_name": "IFT70A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7X7-1", "protein_name": "Intraflagellar transport protein 22 homolog", "gene_name": "IFT22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y547-1", "protein_name": "Intraflagellar transport protein 25 homolog", "gene_name": "IFT25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYA0-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "IFT81", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N7M0-1", "protein_name": "Dynein light chain Tctex-type 5", "gene_name": "DYNLT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZS6-1", "protein_name": "Dynein light chain Tctex-type protein 2", "gene_name": "DYNLT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15643-1", "protein_name": "Thyroid receptor-interacting protein 11", "gene_name": "TRIP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY31-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "IFT20", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.24140113", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 55 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { 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"glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Positive and negative regulation of Gli activity by Kif7 in the zebrafish embryo.", "journal": "PLoS genetics", "date": "2013", "authors": "Maurya AK, Ben J, Zhao Z, Lee RT, Niah W, Ng AS, Iyu A, Yu W, Elworthy S, van Eeden FJ, Ingham PW", "reference": { "type": "PubMed", "id": "24339784", "url": "https://pubmed.ncbi.nlm.nih.gov/24339784" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22694-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit beta", "gene_name": "PRKACB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13635-1", "protein_name": "Protein patched homolog 1", "gene_name": "PTCH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5JWF2-1", "protein_name": "Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas", "gene_name": "GNAS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q58G59-1", "protein_name": "Kinesin-like protein kif7", "gene_name": "kif7", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q99835-1", "protein_name": "Protein smoothened", "gene_name": "SMO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULD6-1", "protein_name": "Protein inturned", "gene_name": "INTU", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit gamma", "gene_name": "PRKACG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2M1P5-1", "protein_name": "Kinesin-like protein KIF7", "gene_name": "KIF7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68CZ1-1", "protein_name": "Protein fantom", "gene_name": "RPGRIP1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N6U8-1", "protein_name": "G protein-coupled receptor 161", "gene_name": "GPR161", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13861-1", "protein_name": "cAMP-dependent protein kinase type II-alpha regulatory subunit", "gene_name": "PRKAR2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08151-1", "protein_name": "Transcription activator GLI1", "gene_name": "GLI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit alpha", "gene_name": "PRKACA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75386-1", "protein_name": "Tubby-related protein 3", "gene_name": "TULP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95622-1", "protein_name": "Adenylate cyclase type 5", "gene_name": "ADCY5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08828-1", "protein_name": "Adenylate cyclase type 1", "gene_name": "ADCY1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40145-1", "protein_name": "Adenylate cyclase type 8", "gene_name": "ADCY8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60266-1", "protein_name": "Adenylate cyclase type 3", "gene_name": "ADCY3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFM4-1", "protein_name": "Adenylate cyclase type 4", "gene_name": "ADCY4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31323-1", "protein_name": "cAMP-dependent protein kinase type II-beta regulatory subunit", "gene_name": "PRKAR2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31321-1", "protein_name": "cAMP-dependent protein kinase type I-beta regulatory subunit", "gene_name": "PRKAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75665-1", "protein_name": "Centriole and centriolar satellite protein OFD1", "gene_name": "OFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BT04-1", "protein_name": "Protein fuzzy homolog", "gene_name": "FUZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10071-1", "protein_name": "Transcription activator GLI3", "gene_name": "GLI3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMX1-1", "protein_name": "Suppressor of fused homolog", "gene_name": "SUFU", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXB0-1", "protein_name": "Tectonic-like complex member MKS1", "gene_name": "MKS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10070-5", "protein_name": "Transcription activator GLI2", "gene_name": "GLI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60503-1", "protein_name": "Adenylate cyclase 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "TTC26/DYF13 is an intraflagellar transport protein required for transport of motility-related proteins into flagella.", "journal": "eLife", "date": "2014", "authors": "Ishikawa H, Ide T, Yagi T, Jiang X, Hirono M, Sasaki H, Yanagisawa H, Wemmer KA, Stainier DY, Qin H, Kamiya R, Marshall WF", "reference": { "type": "PubMed", "id": "24596149", "url": 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"tax_name": "Human" }, { "uniprot_canonical_ac": "Q5PR66-1", "protein_name": "Intraflagellar transport protein 56", "gene_name": "ift56", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q8TDR0-1", "protein_name": "TRAF3-interacting protein 1", "gene_name": "TRAF3IP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ1-1", "protein_name": "Clusterin-associated protein 1", "gene_name": "CLUAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCX1-1", "protein_name": "Cytoplasmic dynein 2 light intermediate chain 1", "gene_name": "DYNC2LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP97-1", "protein_name": "Dynein light chain roadblock-type 1", "gene_name": "DYNLRB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14782-1", "protein_name": "Kinesin-like protein KIF3C", "gene_name": "KIF3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92845-1", "protein_name": "Kinesin-associated protein 3", "gene_name": "KIFAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0AVF1-1", "protein_name": "Intraflagellar transport protein 56", "gene_name": "IFT56", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WW35-1", "protein_name": "Dynein light chain Tctex-type protein 2B", "gene_name": "DYNLT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EX3-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 2", "gene_name": "DYNC2I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport protein 70A", "gene_name": "IFT70A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7X7-1", "protein_name": "Intraflagellar transport protein 22 homolog", "gene_name": "IFT22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y547-1", "protein_name": "Intraflagellar transport protein 25 homolog", "gene_name": "IFT25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYA0-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "IFT81", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N7M0-1", "protein_name": "Dynein light chain Tctex-type 5", "gene_name": "DYNLT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZS6-1", "protein_name": "Dynein light chain Tctex-type protein 2", "gene_name": "DYNLT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15643-1", "protein_name": "Thyroid receptor-interacting protein 11", "gene_name": "TRIP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY31-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "IFT20", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": 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in molecular, cellular and developmental biology", "date": "2014", "authors": "Bhogaraju S, Weber K, Engel BD, Lechtreck KF, Lorentzen E", "reference": { "type": "PubMed", "id": "24616010", "url": "https://pubmed.ncbi.nlm.nih.gov/24616010" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15066-1", "protein_name": "Kinesin-like protein KIF3B", "gene_name": "KIF3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BW83-1", "protein_name": "Intraflagellar transport protein 27 homolog", "gene_name": "IFT27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2H3-1", "protein_name": "Intraflagellar transport protein 80 homolog", "gene_name": "IFT80", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVS4-1", "protein_name": "Cytoplasmic dynein 2 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"tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0AVF1-1", "protein_name": "Intraflagellar transport protein 56", "gene_name": "IFT56", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WW35-1", "protein_name": "Dynein light chain Tctex-type protein 2B", "gene_name": "DYNLT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EX3-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 2", "gene_name": "DYNC2I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport protein 70A", "gene_name": "IFT70A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7X7-1", "protein_name": "Intraflagellar transport protein 22 homolog", "gene_name": "IFT22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y547-1", "protein_name": "Intraflagellar transport protein 25 homolog", "gene_name": "IFT25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYA0-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "IFT81", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N7M0-1", "protein_name": "Dynein light chain Tctex-type 5", "gene_name": "DYNLT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZS6-1", "protein_name": "Dynein light chain Tctex-type protein 2", "gene_name": "DYNLT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15643-1", "protein_name": "Thyroid receptor-interacting protein 11", "gene_name": "TRIP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY31-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "IFT20", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.24616010", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 54 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Primary cilium and sonic hedgehog signaling during neural tube patterning: role of GPCRs and second messengers.", "journal": "Developmental neurobiology", "date": "2015", "authors": "Pal K, Mukhopadhyay S", "reference": { "type": "PubMed", "id": "24863049", "url": "https://pubmed.ncbi.nlm.nih.gov/24863049" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22694-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit beta", "gene_name": "PRKACB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13635-1", "protein_name": "Protein patched homolog 1", "gene_name": "PTCH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5JWF2-1", "protein_name": "Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas", "gene_name": "GNAS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15465-1", "protein_name": "Sonic hedgehog protein", "gene_name": "SHH", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99835-1", "protein_name": "Protein smoothened", "gene_name": "SMO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULD6-1", "protein_name": "Protein inturned", "gene_name": "INTU", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit gamma", "gene_name": "PRKACG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2M1P5-1", "protein_name": "Kinesin-like protein KIF7", "gene_name": "KIF7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q62226-1", "protein_name": "Sonic hedgehog protein", "gene_name": "Shh", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q68CZ1-1", "protein_name": "Protein fantom", "gene_name": "RPGRIP1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N6U8-1", "protein_name": "G protein-coupled receptor 161", "gene_name": "GPR161", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13861-1", "protein_name": "cAMP-dependent protein kinase type II-alpha regulatory subunit", "gene_name": "PRKAR2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08151-1", "protein_name": "Transcription activator GLI1", "gene_name": "GLI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit alpha", "gene_name": "PRKACA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75386-1", "protein_name": "Tubby-related protein 3", "gene_name": "TULP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95622-1", "protein_name": "Adenylate cyclase type 5", "gene_name": "ADCY5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08828-1", "protein_name": "Adenylate cyclase type 1", "gene_name": "ADCY1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40145-1", "protein_name": "Adenylate cyclase type 8", "gene_name": "ADCY8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60266-1", "protein_name": "Adenylate cyclase type 3", "gene_name": "ADCY3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFM4-1", "protein_name": "Adenylate cyclase type 4", "gene_name": "ADCY4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31323-1", "protein_name": "cAMP-dependent protein kinase type II-beta regulatory subunit", "gene_name": "PRKAR2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31321-1", "protein_name": "cAMP-dependent protein kinase type I-beta regulatory subunit", "gene_name": "PRKAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75665-1", "protein_name": "Centriole and centriolar satellite protein OFD1", "gene_name": "OFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BT04-1", "protein_name": "Protein fuzzy homolog", "gene_name": "FUZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10071-1", "protein_name": "Transcription activator GLI3", "gene_name": "GLI3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMX1-1", "protein_name": "Suppressor of fused homolog", "gene_name": "SUFU", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXB0-1", "protein_name": "Tectonic-like complex member MKS1", "gene_name": "MKS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10070-5", "protein_name": 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"Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.24863049", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 58 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "G-protein-coupled receptors and localized signaling in the primary cilium during ventral neural tube patterning.", "journal": "Birth defects research. Part A, Clinical and molecular teratology", "date": "2015", "authors": "Hwang SH, Mukhopadhyay S", "reference": { "type": "PubMed", "id": "24917297", "url": "https://pubmed.ncbi.nlm.nih.gov/24917297" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22694-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit beta", "gene_name": "PRKACB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13635-1", "protein_name": "Protein patched homolog 1", "gene_name": "PTCH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5JWF2-1", "protein_name": "Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas", "gene_name": "GNAS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99835-1", "protein_name": "Protein smoothened", "gene_name": "SMO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULD6-1", "protein_name": "Protein inturned", "gene_name": "INTU", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit gamma", "gene_name": "PRKACG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2M1P5-1", "protein_name": "Kinesin-like protein KIF7", "gene_name": "KIF7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68CZ1-1", "protein_name": "Protein fantom", "gene_name": "RPGRIP1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N6U8-1", "protein_name": "G protein-coupled receptor 161", "gene_name": "GPR161", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": 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"gene_name": "ADCY1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40145-1", "protein_name": "Adenylate cyclase type 8", "gene_name": "ADCY8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60266-1", "protein_name": "Adenylate cyclase type 3", "gene_name": "ADCY3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFM4-1", "protein_name": "Adenylate cyclase type 4", "gene_name": "ADCY4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31323-1", "protein_name": "cAMP-dependent protein kinase type II-beta regulatory subunit", "gene_name": "PRKAR2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31321-1", "protein_name": "cAMP-dependent protein kinase type I-beta regulatory 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"uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BT04-1", "protein_name": "Protein fuzzy homolog", "gene_name": "FUZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10071-1", "protein_name": "Transcription activator GLI3", "gene_name": "GLI3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMX1-1", "protein_name": "Suppressor of fused homolog", "gene_name": "SUFU", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXB0-1", "protein_name": "Tectonic-like complex member MKS1", "gene_name": "MKS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10070-5", "protein_name": "Transcription activator GLI2", "gene_name": "GLI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60503-1", "protein_name": "Adenylate cyclase type 9", "gene_name": "ADCY9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PN6-1", "protein_name": "Adenylate cyclase type 10", "gene_name": "ADCY10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51828-1", "protein_name": "Adenylate cyclase type 7", "gene_name": "ADCY7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43306-1", "protein_name": "Adenylate cyclase type 6", "gene_name": "ADCY6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08462-1", "protein_name": "Adenylate cyclase type 2", "gene_name": "ADCY2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": 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"sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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Hedgehog signalling by organizing the cilium tip compartment.", "journal": "Nature cell biology", "date": "2014", "authors": "He M, Subramanian R, Bangs F, Omelchenko T, Liem KF Jr, Kapoor TM, Anderson KV", "reference": { "type": "PubMed", "id": "24952464", "url": "https://pubmed.ncbi.nlm.nih.gov/24952464" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22694-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit beta", "gene_name": "PRKACB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13635-1", "protein_name": "Protein patched homolog 1", "gene_name": "PTCH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5JWF2-1", "protein_name": "Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas", "gene_name": "GNAS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99835-1", "protein_name": "Protein smoothened", "gene_name": "SMO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULD6-1", "protein_name": "Protein inturned", "gene_name": "INTU", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit gamma", "gene_name": "PRKACG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2M1P5-1", "protein_name": "Kinesin-like protein KIF7", "gene_name": "KIF7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68CZ1-1", "protein_name": "Protein fantom", "gene_name": "RPGRIP1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N6U8-1", "protein_name": "G protein-coupled 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"ADCY5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08828-1", "protein_name": "Adenylate cyclase type 1", "gene_name": "ADCY1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40145-1", "protein_name": "Adenylate cyclase type 8", "gene_name": "ADCY8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60266-1", "protein_name": "Adenylate cyclase type 3", "gene_name": "ADCY3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFM4-1", "protein_name": "Adenylate cyclase type 4", "gene_name": "ADCY4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31323-1", "protein_name": "cAMP-dependent protein kinase type II-beta regulatory subunit", "gene_name": "PRKAR2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31321-1", "protein_name": "cAMP-dependent protein kinase type I-beta regulatory subunit", "gene_name": "PRKAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75665-1", "protein_name": "Centriole and centriolar satellite protein OFD1", "gene_name": "OFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BT04-1", "protein_name": "Protein fuzzy homolog", "gene_name": "FUZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10071-1", "protein_name": "Transcription activator GLI3", "gene_name": "GLI3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMX1-1", "protein_name": "Suppressor of fused homolog", "gene_name": "SUFU", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXB0-1", "protein_name": "Tectonic-like complex member MKS1", "gene_name": "MKS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10070-5", "protein_name": "Transcription activator GLI2", "gene_name": "GLI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "B7ZNG0-1", "protein_name": "Kinesin-like protein KIF7", "gene_name": "Kif7", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60503-1", "protein_name": "Adenylate cyclase type 9", "gene_name": "ADCY9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PN6-1", "protein_name": "Adenylate cyclase type 10", "gene_name": "ADCY10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51828-1", "protein_name": "Adenylate cyclase type 7", "gene_name": "ADCY7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43306-1", "protein_name": "Adenylate cyclase type 6", "gene_name": "ADCY6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08462-1", "protein_name": "Adenylate cyclase type 2", "gene_name": "ADCY2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.24952464", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 57 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Subunit composition of the human cytoplasmic dynein-2 complex.", "journal": "Journal of cell science", "date": "2014", "authors": "Asante D, Stevenson NL, Stephens DJ", "reference": { "type": "PubMed", "id": "25205765", "url": "https://pubmed.ncbi.nlm.nih.gov/25205765" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15066-1", "protein_name": "Kinesin-like protein KIF3B", "gene_name": "KIF3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BW83-1", "protein_name": "Intraflagellar transport protein 27 homolog", "gene_name": "IFT27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2H3-1", "protein_name": "Intraflagellar transport protein 80 homolog", "gene_name": "IFT80", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVS4-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 1", "gene_name": "DYNC2I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDR0-1", "protein_name": "TRAF3-interacting protein 1", "gene_name": "TRAF3IP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ1-1", "protein_name": "Clusterin-associated protein 1", "gene_name": "CLUAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCX1-1", "protein_name": "Cytoplasmic dynein 2 light intermediate chain 1", "gene_name": "DYNC2LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP97-1", "protein_name": "Dynein light chain roadblock-type 1", "gene_name": "DYNLRB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14782-1", "protein_name": "Kinesin-like protein KIF3C", "gene_name": "KIF3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92845-1", "protein_name": "Kinesin-associated protein 3", "gene_name": "KIFAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0AVF1-1", "protein_name": "Intraflagellar transport protein 56", "gene_name": "IFT56", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WW35-1", "protein_name": "Dynein light chain Tctex-type protein 2B", "gene_name": "DYNLT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EX3-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 2", "gene_name": "DYNC2I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport protein 70A", "gene_name": "IFT70A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7X7-1", "protein_name": "Intraflagellar transport protein 22 homolog", "gene_name": "IFT22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y547-1", "protein_name": "Intraflagellar transport protein 25 homolog", "gene_name": "IFT25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYA0-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "IFT81", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N7M0-1", "protein_name": "Dynein light chain Tctex-type 5", "gene_name": "DYNLT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZS6-1", "protein_name": "Dynein light chain Tctex-type protein 2", "gene_name": "DYNLT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15643-1", "protein_name": "Thyroid receptor-interacting protein 11", "gene_name": "TRIP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY31-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "IFT20", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.25205765", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 54 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Crystal structures of IFT70/52 and IFT52/46 provide insight into intraflagellar transport B core complex assembly.", "journal": "The Journal of cell biology", "date": "2014", "authors": "Taschner M, Kotsis F, Braeuer P, Kuehn EW, Lorentzen E", "reference": { "type": "PubMed", "id": "25349261", "url": "https://pubmed.ncbi.nlm.nih.gov/25349261" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15066-1", "protein_name": "Kinesin-like protein KIF3B", "gene_name": "KIF3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BW83-1", "protein_name": "Intraflagellar transport protein 27 homolog", "gene_name": "IFT27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2H3-1", "protein_name": "Intraflagellar transport protein 80 homolog", "gene_name": "IFT80", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVS4-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 1", "gene_name": "DYNC2I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDR0-1", "protein_name": "TRAF3-interacting protein 1", "gene_name": "TRAF3IP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ1-1", "protein_name": "Clusterin-associated protein 1", "gene_name": "CLUAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCX1-1", "protein_name": "Cytoplasmic dynein 2 light intermediate chain 1", "gene_name": "DYNC2LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP97-1", "protein_name": "Dynein light chain roadblock-type 1", "gene_name": "DYNLRB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14782-1", "protein_name": "Kinesin-like protein KIF3C", "gene_name": "KIF3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92845-1", "protein_name": "Kinesin-associated protein 3", "gene_name": "KIFAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0AVF1-1", "protein_name": "Intraflagellar transport protein 56", "gene_name": "IFT56", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WW35-1", "protein_name": "Dynein light chain Tctex-type protein 2B", "gene_name": "DYNLT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EX3-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 2", "gene_name": "DYNC2I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport protein 70A", "gene_name": "IFT70A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7X7-1", "protein_name": "Intraflagellar transport protein 22 homolog", "gene_name": "IFT22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y547-1", "protein_name": "Intraflagellar transport protein 25 homolog", "gene_name": "IFT25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYA0-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "IFT81", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N7M0-1", "protein_name": "Dynein light chain Tctex-type 5", "gene_name": "DYNLT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZS6-1", "protein_name": "Dynein light chain Tctex-type protein 2", "gene_name": "DYNLT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15643-1", "protein_name": "Thyroid receptor-interacting protein 11", "gene_name": "TRIP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY31-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "IFT20", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.25349261", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 54 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The intraflagellar transport protein IFT27 promotes BBSome exit from cilia through the GTPase ARL6/BBS3.", "journal": "Developmental cell", "date": "2014", "authors": "Liew GM, Ye F, Nager AR, Murphy JP, Lee JS, Aguiar M, Breslow DK, Gygi SP, Nachury MV", "reference": { "type": "PubMed", "id": "25443296", "url": "https://pubmed.ncbi.nlm.nih.gov/25443296" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15066-1", "protein_name": "Kinesin-like protein KIF3B", "gene_name": "KIF3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BW83-1", "protein_name": "Intraflagellar transport protein 27 homolog", "gene_name": "IFT27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49368-1", "protein_name": "T-complex protein 1 subunit gamma", "gene_name": "CCT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2H3-1", "protein_name": "Intraflagellar transport protein 80 homolog", "gene_name": "IFT80", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50991-1", "protein_name": "T-complex protein 1 subunit delta", "gene_name": "CCT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVS4-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 1", "gene_name": "DYNC2I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32745-1", "protein_name": "Somatostatin receptor type 3", "gene_name": "SSTR3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99835-1", "protein_name": "Protein smoothened", "gene_name": "SMO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3SYG4-1", "protein_name": "Protein PTHB1", "gene_name": "BBS9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N3I7-1", "protein_name": "BBSome complex member BBS5", "gene_name": "BBS5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDR0-1", "protein_name": "TRAF3-interacting protein 1", "gene_name": "TRAF3IP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0F7-1", "protein_name": "ADP-ribosylation factor-like protein 6", "gene_name": "ARL6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ1-1", "protein_name": "Clusterin-associated protein 1", "gene_name": "CLUAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCX1-1", "protein_name": "Cytoplasmic dynein 2 light intermediate chain 1", "gene_name": "DYNC2LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP97-1", "protein_name": "Dynein light chain roadblock-type 1", "gene_name": "DYNLRB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14782-1", "protein_name": "Kinesin-like protein KIF3C", "gene_name": "KIF3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TAM2-1", "protein_name": "Tetratricopeptide repeat protein 8", "gene_name": "TTC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92845-1", "protein_name": "Kinesin-associated protein 3", "gene_name": "KIFAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17987-1", "protein_name": "T-complex protein 1 subunit alpha", "gene_name": "TCP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0AVF1-1", "protein_name": "Intraflagellar transport protein 56", "gene_name": "IFT56", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFJ9-1", "protein_name": "BBSome complex member BBS1", "gene_name": "BBS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WW35-1", "protein_name": "Dynein light chain Tctex-type protein 2B", "gene_name": "DYNLT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWZ6-1", "protein_name": "BBSome complex member BBS7", "gene_name": "BBS7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RK4-1", "protein_name": "BBSome complex member BBS4", "gene_name": "BBS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXC9-1", "protein_name": "BBSome complex member BBS2", "gene_name": "BBS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EX3-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 2", "gene_name": "DYNC2I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport 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}, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7X7-1", "protein_name": "Intraflagellar transport protein 22 homolog", "gene_name": "IFT22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y547-1", "protein_name": "Intraflagellar transport protein 25 homolog", "gene_name": "IFT25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48643-1", "protein_name": "T-complex protein 1 subunit epsilon", "gene_name": "CCT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide 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Hildebrandt F, Thauvin-Robinet C, Krakow D, Jackson PK, Wallingford JB", "reference": { "type": "PubMed", "id": "27158779", "url": "https://pubmed.ncbi.nlm.nih.gov/27158779" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8C456-1", "protein_name": "WD repeat-containing and planar cell polarity effector protein fritz homolog", "gene_name": "Wdpcp", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9ULD6-1", "protein_name": "Protein inturned", "gene_name": "INTU", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3UYI6-1", "protein_name": "Protein fuzzy homolog", "gene_name": "Fuz", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O95876-1", "protein_name": "WD repeat-containing and planar cell polarity effector protein fritz homolog", "gene_name": "WDPCP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8CE72-1", 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", 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Biol. Cell", "date": "2017", "authors": "Hirano T, Katoh Y, Nakayama K", "reference": { "type": "PubMed", "id": "27932497", "url": "https://pubmed.ncbi.nlm.nih.gov/27932497" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75386-1", "protein_name": "Tubby-related protein 3", "gene_name": "TULP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Ciliopathy-associated mutations of IFT122 impair ciliary protein trafficking but not ciliogenesis.", "journal": "Human molecular genetics", "date": "2018", "authors": "Takahara M, Katoh Y, Nakamura K, Hirano T, Sugawa M, Tsurumi Y, Nakayama K", "reference": { "type": "PubMed", "id": "29220510", "url": "https://pubmed.ncbi.nlm.nih.gov/29220510" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 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"tax_name": "Human" }, { "uniprot_canonical_ac": "O14782-1", "protein_name": "Kinesin-like protein KIF3C", "gene_name": "KIF3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92845-1", "protein_name": "Kinesin-associated protein 3", "gene_name": "KIFAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0AVF1-1", "protein_name": "Intraflagellar transport protein 56", "gene_name": "IFT56", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WW35-1", "protein_name": "Dynein light chain Tctex-type protein 2B", "gene_name": "DYNLT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EX3-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 2", "gene_name": "DYNC2I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport protein 70A", "gene_name": "IFT70A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": 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"IFT25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYA0-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "IFT81", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N7M0-1", "protein_name": "Dynein light chain Tctex-type 5", "gene_name": "DYNLT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZS6-1", "protein_name": "Dynein light chain Tctex-type protein 2", "gene_name": "DYNLT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15643-1", "protein_name": "Thyroid receptor-interacting protein 11", "gene_name": "TRIP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY31-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "IFT20", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8516294", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 54 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The Chlamydomonas kinesin-like protein FLA10 is involved in motility associated with the flagellar membrane.", "journal": "The Journal of cell biology", "date": "1995", "authors": "Kozminski KG, Beech PL, Rosenbaum JL", "reference": { "type": "PubMed", "id": "8522608", "url": "https://pubmed.ncbi.nlm.nih.gov/8522608" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15066-1", "protein_name": "Kinesin-like protein KIF3B", "gene_name": "KIF3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": 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{ "uniprot_canonical_ac": "Q9P2H3-1", "protein_name": "Intraflagellar transport protein 80 homolog", "gene_name": "IFT80", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVS4-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 1", "gene_name": "DYNC2I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDR0-1", "protein_name": "TRAF3-interacting protein 1", "gene_name": "TRAF3IP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ1-1", "protein_name": "Clusterin-associated protein 1", "gene_name": "CLUAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCX1-1", "protein_name": "Cytoplasmic dynein 2 light intermediate chain 1", "gene_name": "DYNC2LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP97-1", "protein_name": "Dynein light chain roadblock-type 1", "gene_name": "DYNLRB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14782-1", "protein_name": "Kinesin-like protein KIF3C", "gene_name": "KIF3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92845-1", "protein_name": "Kinesin-associated protein 3", "gene_name": "KIFAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0AVF1-1", "protein_name": "Intraflagellar transport protein 56", "gene_name": "IFT56", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WW35-1", "protein_name": "Dynein light chain 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"tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7X7-1", "protein_name": "Intraflagellar transport protein 22 homolog", "gene_name": "IFT22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y547-1", "protein_name": "Intraflagellar transport protein 25 homolog", "gene_name": "IFT25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYA0-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "IFT81", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N7M0-1", "protein_name": "Dynein light chain Tctex-type 5", "gene_name": "DYNLT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZS6-1", "protein_name": "Dynein light chain Tctex-type protein 2", "gene_name": "DYNLT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15643-1", "protein_name": "Thyroid receptor-interacting protein 11", "gene_name": "TRIP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY31-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "IFT20", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8522608", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 54 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Transport of a novel complex in the cytoplasmic matrix of Chlamydomonas flagella.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "1997", "authors": "Piperno G, Mead K", "reference": { "type": "PubMed", "id": "9114011", "url": "https://pubmed.ncbi.nlm.nih.gov/9114011" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15066-1", "protein_name": "Kinesin-like protein KIF3B", "gene_name": "KIF3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BW83-1", "protein_name": "Intraflagellar transport protein 27 homolog", "gene_name": "IFT27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2H3-1", "protein_name": "Intraflagellar transport protein 80 homolog", "gene_name": "IFT80", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVS4-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 1", "gene_name": "DYNC2I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDR0-1", "protein_name": "TRAF3-interacting protein 1", "gene_name": "TRAF3IP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ1-1", "protein_name": "Clusterin-associated protein 1", "gene_name": "CLUAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCX1-1", "protein_name": "Cytoplasmic dynein 2 light intermediate chain 1", "gene_name": "DYNC2LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP97-1", "protein_name": "Dynein light chain roadblock-type 1", "gene_name": "DYNLRB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14782-1", "protein_name": "Kinesin-like protein KIF3C", "gene_name": "KIF3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92845-1", "protein_name": "Kinesin-associated protein 3", "gene_name": "KIFAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0AVF1-1", "protein_name": "Intraflagellar transport protein 56", "gene_name": "IFT56", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WW35-1", "protein_name": "Dynein light chain Tctex-type protein 2B", "gene_name": "DYNLT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EX3-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 2", "gene_name": "DYNC2I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport protein 70A", "gene_name": "IFT70A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7X7-1", "protein_name": "Intraflagellar transport protein 22 homolog", "gene_name": "IFT22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y547-1", "protein_name": "Intraflagellar transport protein 25 homolog", "gene_name": "IFT25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYA0-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "IFT81", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N7M0-1", "protein_name": "Dynein light chain Tctex-type 5", "gene_name": "DYNLT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZS6-1", "protein_name": "Dynein light chain Tctex-type protein 2", "gene_name": "DYNLT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15643-1", "protein_name": "Thyroid receptor-interacting protein 11", "gene_name": "TRIP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY31-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "IFT20", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9114011", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 54 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A dynein light chain is essential for the retrograde particle movement of intraflagellar transport (IFT).", "journal": "The Journal of cell biology", "date": "1998", "authors": "Pazour GJ, Wilkerson CG, Witman GB", "reference": { "type": "PubMed", "id": "9585416", "url": "https://pubmed.ncbi.nlm.nih.gov/9585416" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15066-1", "protein_name": "Kinesin-like protein KIF3B", "gene_name": "KIF3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BW83-1", "protein_name": "Intraflagellar transport protein 27 homolog", "gene_name": "IFT27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2H3-1", "protein_name": "Intraflagellar transport protein 80 homolog", "gene_name": "IFT80", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVS4-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 1", "gene_name": "DYNC2I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDR0-1", "protein_name": "TRAF3-interacting protein 1", "gene_name": "TRAF3IP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ1-1", "protein_name": "Clusterin-associated protein 1", "gene_name": "CLUAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCX1-1", "protein_name": "Cytoplasmic dynein 2 light intermediate chain 1", "gene_name": "DYNC2LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP97-1", "protein_name": "Dynein light chain roadblock-type 1", "gene_name": "DYNLRB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14782-1", "protein_name": "Kinesin-like protein KIF3C", "gene_name": "KIF3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92845-1", "protein_name": "Kinesin-associated protein 3", "gene_name": "KIFAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", 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"TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport protein 70A", "gene_name": "IFT70A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7X7-1", "protein_name": "Intraflagellar transport protein 22 homolog", "gene_name": "IFT22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y547-1", "protein_name": "Intraflagellar transport protein 25 homolog", "gene_name": "IFT25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYA0-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "IFT81", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N7M0-1", "protein_name": "Dynein light chain Tctex-type 5", "gene_name": "DYNLT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZS6-1", "protein_name": "Dynein light chain Tctex-type protein 2", "gene_name": "DYNLT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15643-1", "protein_name": "Thyroid receptor-interacting protein 11", "gene_name": "TRIP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY31-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "IFT20", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9585416", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 54 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": 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Fuster JC, Rosenbaum JL", "reference": { "type": "PubMed", "id": "9585417", "url": "https://pubmed.ncbi.nlm.nih.gov/9585417" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15066-1", "protein_name": "Kinesin-like protein KIF3B", "gene_name": "KIF3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BW83-1", "protein_name": "Intraflagellar transport protein 27 homolog", "gene_name": "IFT27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2H3-1", "protein_name": "Intraflagellar transport protein 80 homolog", "gene_name": "IFT80", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVS4-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 1", "gene_name": "DYNC2I1", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0AVF1-1", "protein_name": "Intraflagellar transport protein 56", "gene_name": "IFT56", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WW35-1", "protein_name": "Dynein light chain Tctex-type protein 2B", "gene_name": "DYNLT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EX3-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 2", "gene_name": "DYNC2I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport protein 70A", "gene_name": "IFT70A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7X7-1", "protein_name": "Intraflagellar transport protein 22 homolog", "gene_name": "IFT22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y547-1", "protein_name": "Intraflagellar transport protein 25 homolog", "gene_name": "IFT25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": 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"Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2H3-1", "protein_name": "Intraflagellar transport protein 80 homolog", "gene_name": "IFT80", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVS4-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 1", "gene_name": "DYNC2I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDR0-1", "protein_name": "TRAF3-interacting protein 1", "gene_name": "TRAF3IP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ1-1", "protein_name": "Clusterin-associated protein 1", "gene_name": "CLUAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCX1-1", "protein_name": "Cytoplasmic dynein 2 light intermediate chain 1", "gene_name": "DYNC2LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP97-1", "protein_name": "Dynein light chain roadblock-type 1", "gene_name": "DYNLRB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14782-1", "protein_name": "Kinesin-like protein KIF3C", "gene_name": "KIF3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92845-1", "protein_name": "Kinesin-associated protein 3", "gene_name": "KIFAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0AVF1-1", "protein_name": "Intraflagellar transport protein 56", "gene_name": "IFT56", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WW35-1", "protein_name": "Dynein light chain Tctex-type protein 2B", "gene_name": "DYNLT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EX3-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 2", "gene_name": "DYNC2I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport protein 70A", "gene_name": "IFT70A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7X7-1", "protein_name": "Intraflagellar transport protein 22 homolog", "gene_name": "IFT22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y547-1", "protein_name": "Intraflagellar transport protein 25 homolog", "gene_name": "IFT25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYA0-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "IFT81", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N7M0-1", "protein_name": "Dynein light chain Tctex-type 5", "gene_name": "DYNLT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZS6-1", "protein_name": "Dynein light chain Tctex-type protein 2", "gene_name": "DYNLT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15643-1", "protein_name": "Thyroid receptor-interacting protein 11", "gene_name": "TRIP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY31-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "IFT20", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9852153", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 54 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The B-subdomain of the Xenopus laevis XFIN KRAB-AB domain is responsible for its weaker transcriptional repressor activity compared to human ZNF10/Kox1.", "journal": "PloS one", "date": "2014", "authors": "Born N, Thiesen HJ, Lorenz P", "reference": { "type": "PubMed", "id": "24498343", "url": "https://pubmed.ncbi.nlm.nih.gov/24498343" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P21506-1", "protein_name": "Zinc finger protein 10", "gene_name": "ZNF10", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P21506", "url": "https://www.uniprot.org/uniprotkb/P21506" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.24498343", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "ZNF10 inhibits HIV-1 LTR activity through interaction with NF-kappaB and Sp1 binding motifs.", "journal": "FEBS letters", "date": "2015", "authors": "Nishitsuji H, Sawada L, Sugiyama R, Takaku H", "reference": { "type": "PubMed", "id": "26096782", "url": "https://pubmed.ncbi.nlm.nih.gov/26096782" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P21506-1", "protein_name": "Zinc finger protein 10", "gene_name": "ZNF10", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P21506", "url": "https://www.uniprot.org/uniprotkb/P21506" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.26096782", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": 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"field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The KRAB Domain of ZNF10 Guides the Identification of Specific Amino Acids That Transform the Ancestral KRAB-A-Related Domain Present in Human PRDM9 into a Canonical Modern KRAB-A Domain.", "journal": "International journal of molecular sciences", "date": "2022", "authors": "Lorenz P, Steinbeck F, Krause L, Thiesen HJ", "reference": { "type": "PubMed", "id": "35162997", 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "YTHDF3 facilitates translation and decay of N(6)-methyladenosine-modified RNA.", "journal": "Cell research", "date": "2017", "authors": "Shi H, Wang X, Lu Z, Zhao BS, Ma H, Hsu PJ, Liu C, He C", "reference": { "type": "PubMed", "id": "28106072", "url": "https://pubmed.ncbi.nlm.nih.gov/28106072" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q7Z739-1", "protein_name": "YTH domain-containing family protein 3", "gene_name": "YTHDF3", "tax_name": "Human" }, { 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"total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Cytoplasmic m(6)A reader YTHDF3 promotes mRNA translation.", "journal": "Cell research", "date": "2017", "authors": "Li A, Chen YS, Ping XL, Yang X, Xiao W, Yang Y, Sun HY, Zhu Q, Baidya P, Wang X, Bhattarai DP, Zhao YL, Sun BF, Yang YG", "reference": { "type": "PubMed", "id": "28106076", "url": "https://pubmed.ncbi.nlm.nih.gov/28106076" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q7Z739-1", "protein_name": "YTH domain-containing family protein 3", "gene_name": "YTHDF3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q7Z739", "url": 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by N6-methyladenosine.", "journal": "Cell research", "date": "2017-05", "authors": "Yang Yun, Fan Xiaojuan, Mao Miaowei, Song Xiaowei, Wu Ping, Zhang Yang, Jin Yongfeng, Yang Yi, Chen Ling-Ling, Wang Yang, Wong Catherine Cl, Xiao Xinshu, Wang Zefeng", "reference": { "type": "PubMed", "id": "28281539", "url": "https://pubmed.ncbi.nlm.nih.gov/28281539" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q7Z739-1", "protein_name": "YTH domain-containing family protein 3", "gene_name": "YTHDF3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q7Z739", "url": "https://www.uniprot.org/uniprotkb/Q7Z739" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.28281539", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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"Torrents D, Mykkanen J, Pineda M, Feliubadalo L, Estevez R, de Cid R, Sanjurjo P, Zorzano A, Nunes V, Huoponen K, Reinikainen A, Simell O, Savontaus ML, Aula P, Palacin M", "reference": { "type": "PubMed", "id": "10080182", "url": "https://pubmed.ncbi.nlm.nih.gov/10080182" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UM01-1", "protein_name": "Y+L amino acid transporter 1", "gene_name": "SLC7A7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08195-2", "protein_name": "Amino acid transporter heavy chain SLC3A2", "gene_name": "SLC3A2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UM01", "url": "https://www.uniprot.org/uniprotkb/Q9UM01" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10080182", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], 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Genet.", "date": "1999", "authors": "Borsani G, Bassi MT, Sperandeo MP, De Grandi A, Buoninconti A, Riboni M, Manzoni M, Incerti B, Pepe A, Andria G, Ballabio A, Sebastio G", "reference": { "type": "PubMed", "id": "10080183", "url": "https://pubmed.ncbi.nlm.nih.gov/10080183" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UM01-1", "protein_name": "Y+L amino acid transporter 1", "gene_name": "SLC7A7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHI5-1", "protein_name": "Large neutral amino acids transporter small subunit 2", "gene_name": "SLC7A8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08195-2", "protein_name": "Amino acid transporter heavy chain SLC3A2", "gene_name": "SLC3A2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UM01", "url": "https://www.uniprot.org/uniprotkb/Q9UM01" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": 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"2000", "authors": "Sperandeo MP, Bassi MT, Riboni M, Parenti G, Buoninconti A, Manzoni M, Incerti B, Larocca MR, Di Rocco M, Strisciuglio P, Dianzani I, Parini R, Candito M, Endo F, Ballabio A, Andria G, Sebastio G, Borsani G", "reference": { "type": "PubMed", "id": "10631139", "url": "https://pubmed.ncbi.nlm.nih.gov/10631139" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UM01-1", "protein_name": "Y+L amino acid transporter 1", "gene_name": "SLC7A7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08195-2", "protein_name": "Amino acid transporter heavy chain SLC3A2", "gene_name": "SLC3A2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UM01", "url": "https://www.uniprot.org/uniprotkb/Q9UM01" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10631139", "abstract": "", "glycosylation": [], 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Physiol.", "date": "2000", "authors": "Dall'Asta V, Bussolati O, Sala R, Rotoli B M, Sebastio G, Sperandeo M P, Andria G, Gazzola G C", "reference": { "type": "PubMed", "id": "11078698", "url": "https://pubmed.ncbi.nlm.nih.gov/11078698" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UM01-1", "protein_name": "Y+L amino acid transporter 1", "gene_name": "SLC7A7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92536-1", "protein_name": "Y+L amino acid transporter 2", "gene_name": "SLC7A6", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UM01", "url": "https://www.uniprot.org/uniprotkb/Q9UM01" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11078698", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Two-way arginine transport in human endothelial cells: TNF-alpha stimulation is restricted to system y(+).", "journal": "Am. J. Physiol.", "date": "2002", "authors": "Sala Roberto, Rotoli Bianca Maria, Colla Emanuela, Visigalli Rossana, Parolari Alessandro, Bussolati Ovidio, Gazzola Gian C, Dall'Asta Valeria", "reference": { "type": "PubMed", "id": "11742806", "url": "https://pubmed.ncbi.nlm.nih.gov/11742806" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UM01-1", "protein_name": "Y+L amino acid transporter 1", "gene_name": "SLC7A7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92536-1", "protein_name": "Y+L amino acid transporter 2", "gene_name": "SLC7A6", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UM01", "url": "https://www.uniprot.org/uniprotkb/Q9UM01" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11742806", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A y(+)LAT-1 mutant protein interferes with y(+)LAT-2 activity: implications for the molecular pathogenesis of lysinuric protein intolerance.", "journal": "European journal of human genetics : EJHG", "date": "2005", "authors": "Sperandeo MP, Paladino S, Maiuri L, Maroupulos GD, Zurzolo C, Taglialatela M, Andria G, Sebastio G", "reference": { "type": "PubMed", "id": "15756301", "url": "https://pubmed.ncbi.nlm.nih.gov/15756301" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UM01-1", "protein_name": "Y+L amino acid transporter 1", "gene_name": "SLC7A7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92536-1", "protein_name": "Y+L amino acid transporter 2", "gene_name": "SLC7A6", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UM01", "url": "https://www.uniprot.org/uniprotkb/Q9UM01" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15756301", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Lysinuric protein intolerance: identification and functional analysis of mutations of the SLC7A7 gene.", "journal": "Human mutation", "date": "2005", "authors": "Sperandeo MP, Annunziata P, Ammendola V, Fiorito V, Pepe A, Soldovieri MV, Taglialatela M, Andria G, Sebastio G", "reference": { "type": "PubMed", "id": "15776427", "url": "https://pubmed.ncbi.nlm.nih.gov/15776427" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UM01-1", "protein_name": "Y+L amino acid transporter 1", "gene_name": "SLC7A7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08195-2", "protein_name": "Amino acid transporter heavy chain SLC3A2", "gene_name": "SLC3A2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UM01", "url": "https://www.uniprot.org/uniprotkb/Q9UM01" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15776427", "abstract": "", "glycosylation": [], 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