[ { "title": "Characterization of a full-length cDNA which codes for the human spermidine/spermine N1-acetyltransferase.", "journal": "Biochem. Biophys. Res. Commun.", "date": "1991", "authors": "Xiao L, Celano P, Mank A R, Pegg A E, Casero R A", "reference": { "type": "PubMed", "id": "1652956", "url": "https://pubmed.ncbi.nlm.nih.gov/1652956" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P21673-1", "protein_name": "Diamine acetyltransferase 1", "gene_name": "SAT1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P21673", "url": "https://www.uniprot.org/uniprotkb/P21673" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.1652956", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Mechanistic and structural analysis of human spermidine/spermine N1-acetyltransferase.", "journal": "Biochemistry", "date": "2007", "authors": "Hegde SS, Chandler J, Vetting MW, Yu M, Blanchard JS", "reference": { "type": "PubMed", "id": "17516632", "url": "https://pubmed.ncbi.nlm.nih.gov/17516632" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P21673-1", "protein_name": "Diamine acetyltransferase 1", "gene_name": "SAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6QHF9-2", "protein_name": "Peroxisomal N(1)-acetyl-spermine/spermidine oxidase", "gene_name": "PAOX", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P21673", "url": "https://www.uniprot.org/uniprotkb/P21673" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], 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Chem.", "date": "1991", "authors": "Casero RA Jr, Celano P, Ervin SJ, Applegren NB, Wiest L, Pegg AE", "reference": { "type": "PubMed", "id": "1985966", "url": "https://pubmed.ncbi.nlm.nih.gov/1985966" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P21673-1", "protein_name": "Diamine acetyltransferase 1", "gene_name": "SAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6QHF9-2", "protein_name": "Peroxisomal N(1)-acetyl-spermine/spermidine oxidase", "gene_name": "PAOX", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P21673", "url": "https://www.uniprot.org/uniprotkb/P21673" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.1985966", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "High specific induction of spermidine/spermine N1-acetyltransferase in a human large cell lung carcinoma.", "journal": "Biochem. J.", "date": "1990", "authors": "Casero R A, Celano P, Ervin S J, Wiest L, Pegg A E", "reference": { "type": "PubMed", "id": "2241897", "url": "https://pubmed.ncbi.nlm.nih.gov/2241897" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P21673-1", "protein_name": "Diamine acetyltransferase 1", "gene_name": "SAT1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P21673", "url": "https://www.uniprot.org/uniprotkb/P21673" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.2241897", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", 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[] } ] }, { "title": "MYC-driven U2SURP regulates alternative splicing of SAT1 to promote triple-negative breast cancer progression.", "journal": "Cancer letters", "date": "2023-04-28", "authors": "Deng Ling, Liao Li, Zhang Yin-Ling, Hu Shu-Yuan, Yang Shao-Ying, Ma Xiao-Yan, Huang Min-Ying, Zhang Fang-Lin, Li Da-Qiang", "reference": { "type": "PubMed", "id": "36907504", "url": "https://pubmed.ncbi.nlm.nih.gov/36907504" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P21673-1", "protein_name": "Diamine acetyltransferase 1", "gene_name": "SAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15042-1", "protein_name": "U2 snRNP-associated SURP motif-containing protein", "gene_name": "U2SURP", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P21673", "url": "https://www.uniprot.org/uniprotkb/P21673" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": 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Guangyin, Liang Jiaqi, Zhang Yuchen, Shan Guangyao, Bian Yunyi, Gu Jie, Zhan Cheng, Ge Di", "reference": { "type": "PubMed", "id": "38831092", "url": "https://pubmed.ncbi.nlm.nih.gov/38831092" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P21673-1", "protein_name": "Diamine acetyltransferase 1", "gene_name": "SAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99583-1", "protein_name": "Max-binding protein MNT", "gene_name": "MNT", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P21673", "url": "https://www.uniprot.org/uniprotkb/P21673" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.38831092", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", 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J.", "date": "1996", "authors": "Xiao L, Casero R A", "reference": { "type": "PubMed", "id": "8573111", "url": "https://pubmed.ncbi.nlm.nih.gov/8573111" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P21673-1", "protein_name": "Diamine acetyltransferase 1", "gene_name": "SAT1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P21673", "url": "https://www.uniprot.org/uniprotkb/P21673" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8573111", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": 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"n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Regulated expression and intracellular localization of cystatin F in human U937 cells.", "journal": "Eur. J. Biochem.", "date": "2002", "authors": "Nathanson Carl-Michael, Wass\u00e9lius Johan, Wallin Hanna, Abrahamson Magnus", "reference": { "type": "PubMed", "id": "12423348", "url": "https://pubmed.ncbi.nlm.nih.gov/12423348" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O76096-1", "protein_name": "Cystatin-F", "gene_name": "CST7", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O76096", "url": "https://www.uniprot.org/uniprotkb/O76096" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12423348", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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"glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Cystatin F is secreted, but artificial modification of its C-terminus can induce its endocytic targeting.", "journal": "Experimental cell research", "date": "2004", "authors": "Cappello F, Gatti E, Camossetto V, David A, Lelouard H, Pierre P", "reference": { "type": "PubMed", "id": "15212960", "url": "https://pubmed.ncbi.nlm.nih.gov/15212960" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O76096-1", "protein_name": "Cystatin-F", "gene_name": "CST7", "tax_name": "Human" } ], "species": [ { "name": "Homo 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": 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"count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The activation of Csk by CD4 interferes with TCR-mediated activatory signaling.", "journal": "European journal of immunology", "date": "2003", "authors": "Marinari B, Simeoni L, Schraven B, Piccolella E, Tuosto L", "reference": { "type": "PubMed", "id": "12938237", "url": "https://pubmed.ncbi.nlm.nih.gov/12938237" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P04234-1", "protein_name": "T-cell surface glycoprotein CD3 delta chain", "gene_name": "CD3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09693-1", "protein_name": "T-cell surface glycoprotein CD3 gamma chain", "gene_name": "CD3G", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41240-1", "protein_name": "Tyrosine-protein kinase CSK", "gene_name": "CSK", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08575-3", "protein_name": "Receptor-type tyrosine-protein phosphatase C", "gene_name": "PTPRC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWQ8-1", "protein_name": "Phosphoprotein associated with glycosphingolipid-enriched microdomains 1", "gene_name": "PAG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20036-1", "protein_name": "HLA class II histocompatibility antigen, DP alpha 1 chain", "gene_name": "HLA-DPA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01737-1", "protein_name": "T cell receptor alpha variable 8-4", "gene_name": "TRAV8-4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04437-1", "protein_name": "T cell receptor alpha variable 29/delta variable 5", "gene_name": "TRAV29DV5", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0A6YYK7-1", "protein_name": "T cell receptor alpha variable 19", "gene_name": "TRAV19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01920-1", "protein_name": "HLA class II histocompatibility antigen, DQ beta 1 chain", "gene_name": "HLA-DQB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01906-1", "protein_name": "HLA class II histocompatibility antigen, DQ alpha 2 chain", "gene_name": "HLA-DQA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01911-1", "protein_name": "HLA class II histocompatibility antigen, DRB1 beta chain", "gene_name": "HLA-DRB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06239-1", "protein_name": "Tyrosine-protein kinase Lck", "gene_name": "LCK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12913-1", "protein_name": "Receptor-type tyrosine-protein phosphatase eta", "gene_name": "PTPRJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04435-1", "protein_name": "T cell receptor beta variable 7-9", "gene_name": "TRBV7-9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01733-1", "protein_name": "T cell receptor beta variable 12-3", "gene_name": "TRBV12-3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01848-1", "protein_name": "T cell receptor alpha chain constant", "gene_name": "TRAC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01850-1", "protein_name": "T cell receptor beta constant 1", "gene_name": "TRBC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07766-1", "protein_name": "T-cell surface glycoprotein CD3 epsilon chain", "gene_name": "CD3E", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2R2-1", "protein_name": "Tyrosine-protein phosphatase non-receptor type 22", "gene_name": "PTPN22", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01730-1", "protein_name": "T-cell surface glycoprotein CD4", "gene_name": "CD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01909-1", "protein_name": "HLA class II histocompatibility antigen, DQ alpha 1 chain", "gene_name": "HLA-DQA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04440-1", "protein_name": "HLA class II histocompatibility antigen, DP beta 1 chain", "gene_name": "HLA-DPB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05538-1", "protein_name": "HLA class II histocompatibility antigen, DQ beta 2 chain", "gene_name": "HLA-DQB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13762-1", "protein_name": "HLA class II histocompatibility antigen, DR beta 4 chain", "gene_name": "HLA-DRB4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q30154-1", "protein_name": "HLA class II histocompatibility antigen, DR beta 5 chain", "gene_name": "HLA-DRB5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01903-1", "protein_name": "HLA class II histocompatibility antigen, DR alpha chain", "gene_name": "HLA-DRA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P79483-1", "protein_name": "HLA class II histocompatibility antigen, DR beta 3 chain", "gene_name": "HLA-DRB3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P04234", "url": "https://www.uniprot.org/uniprotkb/P04234" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12938237", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 28 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 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"Ontogeny of human natural killer (NK) cells: fetal NK cells mediate cytolytic function and express cytoplasmic CD3 epsilon,delta proteins.", "journal": "J. Exp. Med.", "date": "1992", "authors": "Phillips J H, Hori T, Nagler A, Bhat N, Spits H, Lanier L L", "reference": { "type": "PubMed", "id": "1372642", "url": "https://pubmed.ncbi.nlm.nih.gov/1372642" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P04234-1", "protein_name": "T-cell surface glycoprotein CD3 delta chain", "gene_name": "CD3D", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P04234", "url": "https://www.uniprot.org/uniprotkb/P04234" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.1372642", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Biochemical evidence of the physical association of the majority of CD3 delta chains with the accessory/co-receptor molecules CD4 and CD8 on nonactivated T lymphocytes.", "journal": "Eur. J. Immunol.", "date": "1992", "authors": "Suzuki S, Kupsch J, Eichmann K, Saizawa M K", "reference": { "type": "PubMed", "id": "1396954", "url": "https://pubmed.ncbi.nlm.nih.gov/1396954" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P04234-1", "protein_name": "T-cell surface glycoprotein CD3 delta chain", "gene_name": "CD3D", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P04234", "url": "https://www.uniprot.org/uniprotkb/P04234" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.1396954", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Effect of CD3delta deficiency on maturation of alpha/beta and gamma/delta T-cell lineages in severe combined immunodeficiency.", "journal": "N. 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Med.", "date": "2003", "authors": "Dadi Harjit K, Simon Amos J, Roifman Chaim M", "reference": { "type": "PubMed", "id": "14602880", "url": "https://pubmed.ncbi.nlm.nih.gov/14602880" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P04234-1", "protein_name": "T-cell surface glycoprotein CD3 delta chain", "gene_name": "CD3D", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P04234", "url": "https://www.uniprot.org/uniprotkb/P04234" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.14602880", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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Clin. Invest.", "date": "2004", "authors": "de Saint Basile Genevi\u00e8ve, Geissmann Fr\u00e9d\u00e9ric, Flori Elisabeth, Uring-Lambert B\u00e9atrice, Soudais Claire, Cavazzana-Calvo Marina, Durandy Anne, Jabado Nada, Fischer Alain, Le Deist Fran\u00e7oise", "reference": { "type": "PubMed", "id": "15546002", "url": "https://pubmed.ncbi.nlm.nih.gov/15546002" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P04234-1", "protein_name": "T-cell surface glycoprotein CD3 delta chain", "gene_name": "CD3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07766-1", "protein_name": "T-cell surface glycoprotein CD3 epsilon chain", "gene_name": "CD3E", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P04234", "url": "https://www.uniprot.org/uniprotkb/P04234" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15546002", 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"https://pubmed.ncbi.nlm.nih.gov/16364187" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P04234-1", "protein_name": "T-cell surface glycoprotein CD3 delta chain", "gene_name": "CD3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09693-1", "protein_name": "T-cell surface glycoprotein CD3 gamma chain", "gene_name": "CD3G", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41240-1", "protein_name": "Tyrosine-protein kinase CSK", "gene_name": "CSK", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08575-3", "protein_name": "Receptor-type tyrosine-protein phosphatase C", "gene_name": "PTPRC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWQ8-1", "protein_name": "Phosphoprotein associated with glycosphingolipid-enriched microdomains 1", "gene_name": "PAG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20036-1", "protein_name": "HLA class II histocompatibility antigen, DP alpha 1 chain", "gene_name": "HLA-DPA1", "tax_name": "Human" }, { 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "CD45-Csk phosphatase-kinase titration uncouples basal and inducible T cell receptor signaling during thymic development.", "journal": "Immunity", "date": "2010", "authors": "Zikherman J, Jenne C, Watson S, Doan K, Raschke W, Goodnow CC, Weiss A", "reference": { "type": "PubMed", "id": "20346773", "url": "https://pubmed.ncbi.nlm.nih.gov/20346773" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P04234-1", "protein_name": "T-cell surface glycoprotein CD3 delta chain", "gene_name": "CD3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09693-1", "protein_name": "T-cell surface glycoprotein CD3 gamma chain", "gene_name": "CD3G", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41240-1", "protein_name": "Tyrosine-protein kinase CSK", "gene_name": "CSK", "tax_name": "Human" }, { 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}, { "uniprot_canonical_ac": "P05538-1", "protein_name": "HLA class II histocompatibility antigen, DQ beta 2 chain", "gene_name": "HLA-DQB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13762-1", "protein_name": "HLA class II histocompatibility antigen, DR beta 4 chain", "gene_name": "HLA-DRB4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q30154-1", "protein_name": "HLA class II histocompatibility antigen, DR beta 5 chain", "gene_name": "HLA-DRB5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01903-1", "protein_name": "HLA class II histocompatibility antigen, DR alpha chain", "gene_name": "HLA-DRA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P79483-1", "protein_name": "HLA class II histocompatibility antigen, DR beta 3 chain", "gene_name": "HLA-DRB3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P04234", "url": "https://www.uniprot.org/uniprotkb/P04234" } ], "common_name": 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"glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Regulation of Src family kinases involved in T cell receptor signaling by protein-tyrosine phosphatase CD148.", "journal": "The Journal of biological chemistry", "date": "2011", "authors": "Stepanek O, Kalina T, Draber P, Skopcova T, Svojgr K, Angelisova P, Horejsi V, Weiss A, Brdicka T", "reference": { "type": "PubMed", "id": "21543337", "url": "https://pubmed.ncbi.nlm.nih.gov/21543337" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P04234-1", "protein_name": "T-cell surface glycoprotein CD3 delta chain", "gene_name": "CD3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09693-1", "protein_name": "T-cell surface glycoprotein CD3 gamma chain", "gene_name": "CD3G", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41240-1", "protein_name": "Tyrosine-protein kinase CSK", "gene_name": "CSK", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08575-3", "protein_name": "Receptor-type tyrosine-protein phosphatase C", "gene_name": "PTPRC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWQ8-1", "protein_name": "Phosphoprotein associated with 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"tax_name": "Human" }, { "uniprot_canonical_ac": "P01911-1", "protein_name": "HLA class II histocompatibility antigen, DRB1 beta chain", "gene_name": "HLA-DRB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06239-1", "protein_name": "Tyrosine-protein kinase Lck", "gene_name": "LCK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12913-1", "protein_name": "Receptor-type tyrosine-protein phosphatase eta", "gene_name": "PTPRJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04435-1", "protein_name": "T cell receptor beta variable 7-9", "gene_name": "TRBV7-9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01733-1", "protein_name": "T cell receptor beta variable 12-3", "gene_name": "TRBV12-3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01848-1", "protein_name": "T cell receptor alpha chain constant", "gene_name": "TRAC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01850-1", "protein_name": "T cell receptor beta constant 1", "gene_name": "TRBC1", "tax_name": 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histocompatibility antigen, DR beta 4 chain", "gene_name": "HLA-DRB4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q30154-1", "protein_name": "HLA class II histocompatibility antigen, DR beta 5 chain", "gene_name": "HLA-DRB5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01903-1", "protein_name": "HLA class II histocompatibility antigen, DR alpha chain", "gene_name": "HLA-DRA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P79483-1", "protein_name": "HLA class II histocompatibility antigen, DR beta 3 chain", "gene_name": "HLA-DRB3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P04234", "url": "https://www.uniprot.org/uniprotkb/P04234" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.21543337", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 28 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": 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Transplant.", "date": "2011", "authors": "Yu Grace P, Nadeau Kari C, Berk David R, de Saint Basile Genevi\u00e8ve, Lambert Nathalie, Knapnougel Perrine, Roberts Joseph, Kavanau Kristina, Dunn Elizabeth, Stiehm E Richard, Lewis David B, Umetsu Dale T, Puck Jennifer M, Cowan Morton J", "reference": { "type": "PubMed", "id": "21883749", "url": "https://pubmed.ncbi.nlm.nih.gov/21883749" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P04234-1", "protein_name": "T-cell surface glycoprotein CD3 delta chain", "gene_name": "CD3D", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P04234", "url": "https://www.uniprot.org/uniprotkb/P04234" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.21883749", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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J. 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Natl. Acad. Sci. U.S.A.", "date": "1986", "authors": "van den Elsen P, Georgopoulos K, Shepley B A, Orkin S, Terhorst C", "reference": { "type": "PubMed", "id": "2939461", "url": "https://pubmed.ncbi.nlm.nih.gov/2939461" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P04234-1", "protein_name": "T-cell surface glycoprotein CD3 delta chain", "gene_name": "CD3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04235-1", "protein_name": "T-cell surface glycoprotein CD3 delta chain", "gene_name": "Cd3d", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P04234", "url": "https://www.uniprot.org/uniprotkb/P04234" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.2939461", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "The Syk/ZAP-70 protein tyrosine kinase connection to antigen receptor signalling processes.", "journal": "Seminars in immunology", "date": "1995", "authors": "van Oers NS, Weiss A", "reference": { "type": "PubMed", "id": "8520027", "url": "https://pubmed.ncbi.nlm.nih.gov/8520027" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P04234-1", "protein_name": "T-cell surface glycoprotein CD3 delta chain", "gene_name": "CD3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09693-1", "protein_name": "T-cell surface glycoprotein CD3 gamma chain", "gene_name": "CD3G", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20036-1", "protein_name": "HLA class II histocompatibility antigen, DP alpha 1 chain", "gene_name": "HLA-DPA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01737-1", "protein_name": "T cell receptor alpha variable 8-4", "gene_name": "TRAV8-4", "tax_name": "Human" }, { 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{ "uniprot_canonical_ac": "P79483-1", "protein_name": "HLA class II histocompatibility antigen, DR beta 3 chain", "gene_name": "HLA-DRB3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P04234", "url": "https://www.uniprot.org/uniprotkb/P04234" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8520027", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 25 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { 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