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annotated as agmatinase.", "journal": "Scientific reports", "date": "2022-12-21", "authors": "Sinn Malte, Stanoppi Marco, Hauth Franziskus, Fleming Jennifer R, Funck Dietmar, Mayans Olga, Hartig J\u00f6rg S", "reference": { "type": "PubMed", "id": "36543883", "url": "https://pubmed.ncbi.nlm.nih.gov/36543883" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BSE5-1", "protein_name": "Guanidino acid hydrolase, mitochondrial", "gene_name": "AGMAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50440-1", "protein_name": "Glycine amidinotransferase, mitochondrial", "gene_name": "GATM", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BSE5", "url": "https://www.uniprot.org/uniprotkb/Q9BSE5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.36543883", "abstract": "", "glycosylation": [], "mutagenesis": [], 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Giacomo Barbagallo Francesco, Di Marco Maurizio, Miano Nicoletta, Scilletta Sabrina, Spampinato Salvatore, Vitale Alessio, Di Bella Federica, Montalbano Maria, Di Mauro Stefania, Filippello Agnese, Scamporrino Alessandra, Milluzzo Agostino, Di Pino Antonino, Frittitta Lucia, Purrello Francesco, Piro Salvatore, Scicali Roberto", "reference": { "type": "PubMed", "id": "38405139", "url": "https://pubmed.ncbi.nlm.nih.gov/38405139" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y6L6-1", "protein_name": "Solute carrier organic anion transporter family member 1B1", "gene_name": "SLCO1B1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y6L6", "url": "https://www.uniprot.org/uniprotkb/Q9Y6L6" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.38405139", "abstract": "", "glycosylation": [], "mutagenesis": [], 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Med.", "date": "2013", "authors": "Ballif BA, Helias V, Peyrard T, Menanteau C, Saison C, Lucien N, Bourgouin S, Le Gall M, Cartron JP, Arnaud L", "reference": { "type": "PubMed", "id": "23505126", "url": "https://pubmed.ncbi.nlm.nih.gov/23505126" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "B2RUZ4-1", "protein_name": "Small integral membrane protein 1", "gene_name": "SMIM1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "B2RUZ4", "url": "https://www.uniprot.org/uniprotkb/B2RUZ4" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.23505126", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Homozygosity for a null allele of SMIM1 defines the Vel-negative blood group phenotype.", "journal": "Nat. Genet.", "date": "2013", "authors": "Storry JR, Joud M, Christophersen MK, Thuresson B, Akerstrom B, Sojka BN, Nilsson B, Olsson ML", "reference": { "type": "PubMed", "id": "23563606", "url": "https://pubmed.ncbi.nlm.nih.gov/23563606" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "B2RUZ4-1", "protein_name": "Small integral membrane protein 1", "gene_name": "SMIM1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "B2RUZ4", "url": "https://www.uniprot.org/uniprotkb/B2RUZ4" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.23563606", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "SMIM1 underlies the Vel blood group and influences red blood cell traits.", "journal": "Nature genetics", "date": "2013", "authors": "Cvejic A, Haer-Wigman L, Stephens JC, Kostadima M, Smethurst PA, Frontini M, van den Akker E, Bertone P, Bielczyk-Maczynska E, Farrow S, Fehrmann RS, Gray A, de Haas M, Haver VG, Jordan G, Karjalainen J, Kerstens HH, Kiddle G, Lloyd-Jones H, Needs M, Poole J, Soussan AA, Rendon A, Rieneck K, Sambrook JG, Schepers H, Sillje HHW, Sipos B, Swinkels D, Tamuri AU, Verweij N, Watkins NA, Westra HJ, Stemple D, Franke L, Soranzo N, Stunnenberg HG, Goldman N, van der Harst P, van der Schoot CE, Ouwehand WH, Albers CA", "reference": { "type": "PubMed", "id": "23563608", "url": "https://pubmed.ncbi.nlm.nih.gov/23563608" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "B2RUZ4-1", "protein_name": "Small integral membrane protein 1", "gene_name": "SMIM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "B3DHH5-1", "protein_name": "Small integral membrane protein 1", "gene_name": "smim1", "tax_name": "Zebrafish" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "B2RUZ4", "url": "https://www.uniprot.org/uniprotkb/B2RUZ4" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.23563608", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Impact of genetic variation in the SMIM1 gene on Vel expression levels.", "journal": "Transfusion", "date": "2015", "authors": "Haer-Wigman L, Stegmann TC, Solati S, Ait Soussan A, Beckers E, van der Harst P, van Hulst-Sundermeijer M, Ligthart P, van Rhenen D, Schepers H, de Haas M, van der Schoot CE", "reference": { "type": "PubMed", "id": "25647324", "url": "https://pubmed.ncbi.nlm.nih.gov/25647324" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "B2RUZ4-1", "protein_name": "Small integral membrane protein 1", "gene_name": "SMIM1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "B2RUZ4", "url": "https://www.uniprot.org/uniprotkb/B2RUZ4" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.25647324", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "SMIM1 is a type II transmembrane phosphoprotein and displays the Vel blood group antigen at its carboxyl-terminus.", "journal": "FEBS letters", "date": "2015", "authors": "Arnaud L, Kelley LP, Helias V, Cartron JP, Ballif BA", "reference": { "type": "PubMed", "id": "26452714", "url": "https://pubmed.ncbi.nlm.nih.gov/26452714" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "B2RUZ4-1", "protein_name": "Small integral membrane protein 1", "gene_name": "SMIM1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "B2RUZ4", "url": "https://www.uniprot.org/uniprotkb/B2RUZ4" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 17, "end_pos": 17, "sequence_org": "S", "sequence_mut": "A", "comment": "No effect on cell membrane localization; when associated with A-6; A-22 and A-27. No effect on cell surface expression of the Vel antigen; when associated with A-6; A-22 and A-27.", "evidence": [ { "database": "UniProtKB", "id": "B2RUZ4", "url": "https://www.uniprot.org/uniprotkb/B2RUZ4" }, { "database": "PubMed", "id": "26452714", "url": "https://pubmed.ncbi.nlm.nih.gov/26452714" } ], "uniprot_canonical_ac": "B2RUZ4-1" }, { "start_pos": 22, "end_pos": 22, "sequence_org": "S", "sequence_mut": "A", "comment": "No effect on cell membrane localization; when associated with A-6; A-17 and A-27. No effect on cell surface expression of the Vel antigen; when associated with A-6; A-17 and A-27.", "evidence": [ { "database": "UniProtKB", "id": "B2RUZ4", "url": "https://www.uniprot.org/uniprotkb/B2RUZ4" }, { "database": "PubMed", "id": "26452714", "url": "https://pubmed.ncbi.nlm.nih.gov/26452714" } ], "uniprot_canonical_ac": "B2RUZ4-1" }, { "start_pos": 27, "end_pos": 27, "sequence_org": "S", "sequence_mut": "A", "comment": "No effect on cell membrane localization; when associated with A-6; A-17 and A-22. No effect on cell surface expression of the Vel antigen; when associated with A-6; A-17 and A-22.", "evidence": [ { "database": "UniProtKB", "id": "B2RUZ4", "url": "https://www.uniprot.org/uniprotkb/B2RUZ4" }, { "database": "PubMed", "id": "26452714", "url": "https://pubmed.ncbi.nlm.nih.gov/26452714" } ], "uniprot_canonical_ac": "B2RUZ4-1" }, { "start_pos": 35, "end_pos": 35, "sequence_org": "C", "sequence_mut": "S", "comment": "No effect on cell surface expression of the Vel antigen; when associated with S-43.", "evidence": [ { "database": "UniProtKB", "id": "B2RUZ4", "url": "https://www.uniprot.org/uniprotkb/B2RUZ4" }, { "database": "PubMed", "id": "26452714", "url": "https://pubmed.ncbi.nlm.nih.gov/26452714" } ], "uniprot_canonical_ac": "B2RUZ4-1" }, { "start_pos": 43, "end_pos": 43, "sequence_org": "C", "sequence_mut": "S", "comment": "No effect on cell surface expression of the Vel antigen; when associated with S-35.", "evidence": [ { "database": "UniProtKB", "id": "B2RUZ4", "url": "https://www.uniprot.org/uniprotkb/B2RUZ4" }, { "database": "PubMed", "id": "26452714", "url": "https://pubmed.ncbi.nlm.nih.gov/26452714" } ], "uniprot_canonical_ac": "B2RUZ4-1" }, { "start_pos": 6, "end_pos": 6, "sequence_org": "S", "sequence_mut": "A", "comment": "No effect on cell membrane localization; when associated with A-17; A-22 and A-27. No effect on cell surface expression of the Vel antigen; when associated with A-17; A-22 and A-27.", "evidence": [ { "database": "UniProtKB", "id": "B2RUZ4", "url": "https://www.uniprot.org/uniprotkb/B2RUZ4" }, { "database": "PubMed", "id": "26452714", "url": "https://pubmed.ncbi.nlm.nih.gov/26452714" } ], "uniprot_canonical_ac": "B2RUZ4-1" }, { "start_pos": 76, "end_pos": 78, "sequence_org": "KCK", "sequence_mut": "", "comment": "Loss of cell-surface expression of the Vel antigen.", "evidence": [ { "database": "UniProtKB", "id": "B2RUZ4", "url": "https://www.uniprot.org/uniprotkb/B2RUZ4" }, { "database": "PubMed", "id": "26452714", "url": "https://pubmed.ncbi.nlm.nih.gov/26452714" } ], "uniprot_canonical_ac": "B2RUZ4-1" } ], "phosphorylation": [ { "start_pos": 17, "end_pos": 17, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "Phosphoserine", "evidence": [ { "database": "UniProtKB", "id": "B2RUZ4", "url": 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Mol. 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"SOX9 immunosuppression in primary colorectal cancer tumors with lymph node metastasis.", "journal": "Revista de gastroenterologia de Mexico (English)", "date": "2024", "authors": "Guti\u00e9rrez-Gil M C, Espino-Larralde M, Loza-Gonz\u00e1lez V M, Hern\u00e1ndez-Rodr\u00edguez H G", "reference": { "type": "PubMed", "id": "38862362", "url": "https://pubmed.ncbi.nlm.nih.gov/38862362" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P48436-1", "protein_name": "Transcription factor SOX-9", "gene_name": "SOX9", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P48436", "url": "https://www.uniprot.org/uniprotkb/P48436" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.38862362", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { 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"glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Autosomal sex reversal and campomelic dysplasia are caused by mutations in and around the SRY-related gene SOX9.", "journal": "Cell", "date": "1994", "authors": "Wagner T, Wirth J, Meyer J, Zabel B, Held M, Zimmer J, Pasantes J, Bricarelli FD, Keutel J, Hustert E, Wolf U, Tommerup N, Schempp W, Scherer G", "reference": { "type": "PubMed", "id": "8001137", "url": "https://pubmed.ncbi.nlm.nih.gov/8001137" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P48436-1", "protein_name": "Transcription factor SOX-9", "gene_name": "SOX9", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P48436", "url": "https://www.uniprot.org/uniprotkb/P48436" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8001137", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Optimizing the First TPR Domain of the Human SPAG1 Protein Provides Insight into the HSP70 and HSP90 Binding Properties.", "journal": "Biochemistry", "date": "2021", "authors": "Dermouche S, Chagot ME, Manival X, Quinternet M", "reference": { "type": "PubMed", "id": "33739091", "url": "https://pubmed.ncbi.nlm.nih.gov/33739091" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q07617-1", "protein_name": "Sperm-associated antigen 1", "gene_name": "SPAG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q07617", "url": "https://www.uniprot.org/uniprotkb/Q07617" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.33739091", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], 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