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Biol.", "date": "1997", "authors": "Chen Y, Riley DJ, Chen PL, Lee WH", "reference": { "type": "PubMed", "id": "9315664", "url": "https://pubmed.ncbi.nlm.nih.gov/9315664" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9D0F1-1", "protein_name": "Kinetochore protein NDC80 homolog", "gene_name": "Ndc80", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O14777-1", "protein_name": "Kinetochore protein NDC80 homolog", "gene_name": "NDC80", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9D0F1", "url": "https://www.uniprot.org/uniprotkb/Q9D0F1" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.9315664", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", 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U.S.A.", "date": "1991", "authors": "Begley CG, Visvader J, Green AR, Aplan PD, Metcalf D, Kirsch IR, Gough NM", "reference": { "type": "PubMed", "id": "1704135", "url": "https://pubmed.ncbi.nlm.nih.gov/1704135" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P22091-1", "protein_name": "T-cell acute lymphocytic leukemia protein 1 homolog", "gene_name": "Tal1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P22091", "url": "https://www.uniprot.org/uniprotkb/P22091" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.1704135", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Strawberry notch homologue 2 regulates osteoclast fusion by enhancing the expression of DC-STAMP.", "journal": "J. 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Virol.", "date": "1999", "authors": "Harris C E, Boden R A, Astell C R", "reference": { "type": "PubMed", "id": "9847309", "url": "https://pubmed.ncbi.nlm.nih.gov/9847309" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q7TMK9-1", "protein_name": "Heterogeneous nuclear ribonucleoprotein Q", "gene_name": "Syncrip", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O60506-1", "protein_name": "Heterogeneous nuclear ribonucleoprotein Q", "gene_name": "SYNCRIP", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q7TMK9", "url": "https://www.uniprot.org/uniprotkb/Q7TMK9" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.9847309", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The activation of RalGDS can be achieved independently of its Ras binding domain. Implications of an activation mechanism in Ras effector specificity and signal distribution.", "journal": "The Journal of biological chemistry", "date": "2002", "authors": "Linnemann T, Kiel C, Herter P, Herrmann C", "reference": { "type": "PubMed", "id": "11748241", "url": "https://pubmed.ncbi.nlm.nih.gov/11748241" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q03385-1", "protein_name": "Ral guanine nucleotide dissociation stimulator", "gene_name": "Ralgds", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q03385", "url": "https://www.uniprot.org/uniprotkb/Q03385" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.11748241", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "METTL14-mediated methylation of SLC25A3 mitigates mitochondrial damage in osteoblasts, leading to the improvement of osteoporosis.", "journal": "Experimental gerontology", "date": "2024-09", "authors": "Wang Ping, Zhou Weifeng, Chen Fuhua, Zhang Xiaoping, Zhang Qiu, Chen Yiqing, Zhang Nan", "reference": { "type": "PubMed", "id": "38897394", "url": "https://pubmed.ncbi.nlm.nih.gov/38897394" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8VEM8-1", "protein_name": "Solute carrier family 25 member 3", "gene_name": "Slc25a3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q00325-1", "protein_name": "Solute carrier family 25 member 3", "gene_name": "SLC25A3", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8VEM8", "url": 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associated with the mammalian acrosome during spermiogenesis.", "journal": "Exp. Cell Res.", "date": "2001", "authors": "Ramalho-Santos J, Moreno RD, Wessel GM, Chan EK, Schatten G", "reference": { "type": "PubMed", "id": "11412037", "url": "https://pubmed.ncbi.nlm.nih.gov/11412037" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9CW79-1", "protein_name": "Golgin subfamily A member 1", "gene_name": "Golga1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9CW79", "url": "https://www.uniprot.org/uniprotkb/Q9CW79" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.11412037", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { 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U.S.A.", "date": "2003", "authors": "Lu Q, Hope LW, Brasch M, Reinhard C, Cohen SN", "reference": { "type": "PubMed", "id": "12802020", "url": "https://pubmed.ncbi.nlm.nih.gov/12802020" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q99LI8-1", "protein_name": "Hepatocyte growth factor-regulated tyrosine kinase substrate", "gene_name": "Hgs", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q99816-1", "protein_name": "Tumor susceptibility gene 101 protein", "gene_name": "TSG101", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q61187-1", "protein_name": "Tumor susceptibility gene 101 protein", "gene_name": "Tsg101", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q99LI8", "url": "https://www.uniprot.org/uniprotkb/Q99LI8" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 45, "end_pos": 45, "sequence_org": "N", "sequence_mut": "A", "comment": "Reduces interaction with ubiquitin. 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Biol. Chem.", "date": "1997", "authors": "Apte S S, Fukai N, Beier D R, Olsen B R", "reference": { "type": "PubMed", "id": "9325265", "url": "https://pubmed.ncbi.nlm.nih.gov/9325265" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P53690-1", "protein_name": "Matrix metalloproteinase-14", "gene_name": "Mmp14", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P53690", "url": "https://www.uniprot.org/uniprotkb/P53690" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.9325265", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", 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Biophys. 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Dyn.", "date": "2006", "authors": "Kanamoto Takashi, Terada Koji, Yoshikawa Hideki, Furukawa Takahisa", "reference": { "type": "PubMed", "id": "16477647", "url": "https://pubmed.ncbi.nlm.nih.gov/16477647" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q1PSW8-1", "protein_name": "E3 ubiquitin-protein ligase TRIM71", "gene_name": "Trim71", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q1PRL4-1", "protein_name": "E3 ubiquitin-protein ligase TRIM71", "gene_name": "TRIM71", "tax_name": "Chicken" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q1PSW8", "url": "https://www.uniprot.org/uniprotkb/Q1PSW8" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.16477647", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", 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"2005", "authors": "Johnson EB, Hammer RE, Herz J", "reference": { "type": "PubMed", "id": "16207730", "url": "https://pubmed.ncbi.nlm.nih.gov/16207730" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8VI56-1", "protein_name": "Low-density lipoprotein receptor-related protein 4", "gene_name": "Lrp4", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8VI56", "url": "https://www.uniprot.org/uniprotkb/Q8VI56" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.16207730", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", 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"Wang S, Yue H, Derin R B, Guggino W B, Li M", "reference": { "type": "PubMed", "id": "11051556", "url": "https://pubmed.ncbi.nlm.nih.gov/11051556" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9JIL4-1", "protein_name": "Na(+)/H(+) exchange regulatory cofactor NHE-RF3", "gene_name": "Pdzk1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q5T2W1-1", "protein_name": "Na(+)/H(+) exchange regulatory cofactor NHE-RF3", "gene_name": "PDZK1", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9JIL4", "url": "https://www.uniprot.org/uniprotkb/Q9JIL4" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.11051556", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { 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"n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Targeted disruption of the PDZK1 gene by homologous recombination.", "journal": "Molecular and cellular biology", "date": "2003", "authors": "Kocher O, Pal R, Roberts M, Cirovic C, Gilchrist A", "reference": { "type": "PubMed", "id": "12556478", "url": "https://pubmed.ncbi.nlm.nih.gov/12556478" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9JIL4-1", "protein_name": "Na(+)/H(+) exchange regulatory cofactor NHE-RF3", "gene_name": "Pdzk1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9JIL4", "url": "https://www.uniprot.org/uniprotkb/Q9JIL4" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.12556478", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "PDZK1: I. a major scaffolder in brush borders of proximal tubular cells.", "journal": "Kidney international", "date": "2003", "authors": "Gisler SM, Pribanic S, Bacic D, Forrer P, Gantenbein A, Sabourin LA, Tsuji A, Zhao ZS, Manser E, Biber J, Murer H", "reference": { "type": "PubMed", "id": "14531806", "url": "https://pubmed.ncbi.nlm.nih.gov/14531806" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9JIL4-1", "protein_name": "Na(+)/H(+) exchange regulatory cofactor NHE-RF3", "gene_name": "Pdzk1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9JHL1-1", "protein_name": "Na(+)/H(+) exchange regulatory cofactor NHE-RF2", "gene_name": "Nherf2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P70441-1", "protein_name": "Na(+)/H(+) exchange regulatory cofactor NHE-RF1", "gene_name": "Nherf1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q96S37-1", "protein_name": "Solute carrier family 22 member 12", "gene_name": "SLC22A12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Z306-1", "protein_name": "Solute carrier family 22 member 4", "gene_name": "Slc22a4", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9JIL4", "url": "https://www.uniprot.org/uniprotkb/Q9JIL4" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.14531806", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { 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"table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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pharmacology", "date": "2023-12-27", "authors": "Lu Shuanghui, Chen Xiu, Chen Yujia, Zhang Yingqiong, Luo Jun, Jiang Huidi, Fang Luo, Zhou Hui", "reference": { "type": "PubMed", "id": "38158021", "url": "https://pubmed.ncbi.nlm.nih.gov/38158021" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9JIL4-1", "protein_name": "Na(+)/H(+) exchange regulatory cofactor NHE-RF3", "gene_name": "Pdzk1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9JIL4", "url": "https://www.uniprot.org/uniprotkb/Q9JIL4" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.38158021", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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"The nucleolar RNA methyltransferase Misu (NSun2) is required for mitotic spindle stability.", "journal": "The Journal of cell biology", "date": "2009", "authors": "Hussain S, Benavente SB, Nascimento E, Dragoni I, Kurowski A, Gillich A, Humphreys P, Frye M", "reference": { "type": "PubMed", "id": "19596847", "url": "https://pubmed.ncbi.nlm.nih.gov/19596847" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q1HFZ0-1", "protein_name": "RNA cytosine C(5)-methyltransferase NSUN2", "gene_name": "Nsun2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q08J23-1", "protein_name": "RNA cytosine C(5)-methyltransferase NSUN2", "gene_name": "NSUN2", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q1HFZ0", "url": "https://www.uniprot.org/uniprotkb/Q1HFZ0" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.19596847", 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recognizing specific motifs present in mRNAs enriched in exosomes.", "journal": "Biochim. Biophys. Acta", "date": "2017", "authors": "Kossinova OA, Gopanenko AV, Tamkovich SN, Krasheninina OA, Tupikin AE, Kiseleva E, Yanshina DD, Malygin AA, Ven'yaminova AG, Kabilov MR, Karpova GG", "reference": { "type": "PubMed", "id": "28341602", "url": "https://pubmed.ncbi.nlm.nih.gov/28341602" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q1HFZ0-1", "protein_name": "RNA cytosine C(5)-methyltransferase NSUN2", "gene_name": "Nsun2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P67809-1", "protein_name": "Y-box-binding protein 1", "gene_name": "YBX1", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q1HFZ0", "url": "https://www.uniprot.org/uniprotkb/Q1HFZ0" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.28341602", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], 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