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[] } ] }, { "title": "The Protective Role of KANK1 in Podocyte Injury.", "journal": "International journal of molecular sciences", "date": "2024-05-27", "authors": "Oda Keiko, Katayama Kan, Zang Liqing, Toda Masaaki, Tanoue Akiko, Saiki Ryosuke, Yasuma Taro, D'Alessandro-Gabazza Corina N, Shimada Yasuhito, Mori Mutsuki, Suzuki Yasuo, Murata Tomohiro, Hirai Toshinori, Tryggvason Karl, Gabazza Esteban C, Dohi Kaoru", "reference": { "type": "PubMed", "id": "38891998", "url": "https://pubmed.ncbi.nlm.nih.gov/38891998" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "E9Q238-1", "protein_name": "KN motif and ankyrin repeat domains 1", "gene_name": "Kank1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "E9Q238", "url": "https://www.uniprot.org/uniprotkb/E9Q238" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": 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Campos C, Alvarez C, Konen-Waisman S, Lukes N, Ruzsics Z, Howard JC, Schwemmle M, Steinfeldt T", "reference": { "type": "PubMed", "id": "30874554", "url": "https://pubmed.ncbi.nlm.nih.gov/30874554" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q5NCB2-1", "protein_name": "Predicted gene 12185", "gene_name": "Gm12185", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q5NCB2", "url": "https://www.uniprot.org/uniprotkb/Q5NCB2" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.30874554", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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"title": "Evidence that inhibition of BAX activation by BCL-2 involves its tight and preferential interaction with the BH3 domain of BAX.", "journal": "Cell research", "date": "2011-04", "authors": "Ku Bonsu, Liang Chengyu, Jung Jae U, Oh Byung-Ha", "reference": { "type": "PubMed", "id": "21060336", "url": "https://pubmed.ncbi.nlm.nih.gov/21060336" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q07813-1", "protein_name": "Apoptosis regulator BAX", "gene_name": "Bax", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q07813", "url": "https://www.uniprot.org/uniprotkb/Q07813" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.21060336", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", 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cDNAs and a proposal for their classification and nomenclature.", "journal": "Cell Stress Chaperones", "date": "2000", "authors": "Ohtsuka K, Hata M", "reference": { "type": "PubMed", "id": "11147971", "url": "https://pubmed.ncbi.nlm.nih.gov/11147971" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O54946-1", "protein_name": "DnaJ homolog subfamily B member 6", "gene_name": "Dnajb6", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9QYI4-1", "protein_name": "DnaJ homolog subfamily B member 12", "gene_name": "Dnajb12", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9UBS4-1", "protein_name": "DnaJ homolog subfamily B member 11", "gene_name": "DNAJB11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9QYI3-1", "protein_name": "DnaJ homolog subfamily C member 7", "gene_name": "Dnajc7", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9QYI5-3", "protein_name": "DnaJ homolog subfamily B member 2", "gene_name": "Dnajb2", "tax_name": "Mouse" }, { 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Hsp4 alleviates lipopolysaccharide-induced apoptosis of lung epithelial cells via miRNA-466m-3p/DNAjb6 axis.", "journal": "Experimental and molecular pathology", "date": "2020", "authors": "Ji Q, Pan C, Wang J, Yang Z, Li C, Yang C, Zhang W, Wang M, Dong M, Sun Z, Nie S", "reference": { "type": "PubMed", "id": "32976821", "url": "https://pubmed.ncbi.nlm.nih.gov/32976821" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O54946-1", "protein_name": "DnaJ homolog subfamily B member 6", "gene_name": "Dnajb6", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "O54946", "url": "https://www.uniprot.org/uniprotkb/O54946" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.32976821", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { 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research", "date": "2017", "authors": "Xu Q, Liu X, Wang X, Hua Y, Wang X, Chen J, Li J, Wang Y, Stoeger T, Chen S, Huang N", "reference": { "type": "PubMed", "id": "28895026", "url": "https://pubmed.ncbi.nlm.nih.gov/28895026" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q60780-1", "protein_name": "Growth arrest-specific protein 7", "gene_name": "Gas7", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q60780", "url": "https://www.uniprot.org/uniprotkb/Q60780" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.28895026", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", 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"glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Rhythmic PER abundance defines a critical nodal point for negative feedback within the circadian clock mechanism.", "journal": "Mol. Cell", "date": "2009", "authors": "Chen Rongmin, Schirmer Aaron, Lee Yongjin, Lee Hyeongmin, Kumar Vivek, Yoo Seung-Hee, Takahashi Joseph S, Lee Choogon", "reference": { "type": "PubMed", "id": "19917250", "url": "https://pubmed.ncbi.nlm.nih.gov/19917250" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P97784-1", "protein_name": "Cryptochrome-1", "gene_name": "Cry1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O54943-1", "protein_name": "Period circadian protein homolog 2", "gene_name": "Per2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9R194-1", "protein_name": "Cryptochrome-2", "gene_name": "Cry2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P97784", "url": "https://www.uniprot.org/uniprotkb/P97784" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.19917250", "abstract": "", 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Abolishes interaction with PPARA and NR1D1 as well as reduces the amplitude of BMAL1 expression; when associated with 306-A--A-310.", "evidence": [ { "database": "UniProtKB", "id": "O54943", "url": "https://www.uniprot.org/uniprotkb/O54943" }, { "database": "PubMed", "id": "20159955", "url": "https://pubmed.ncbi.nlm.nih.gov/20159955" } ], "uniprot_canonical_ac": "O54943-1" }, { "start_pos": 1052, "end_pos": 1055, "sequence_org": "NLLL", "sequence_mut": "", "comment": "No effect on interaction with NR1D1.", "evidence": [ { "database": "UniProtKB", "id": "O54943", "url": "https://www.uniprot.org/uniprotkb/O54943" }, { "database": "PubMed", "id": "20159955", "url": "https://pubmed.ncbi.nlm.nih.gov/20159955" } ], "uniprot_canonical_ac": "O54943-1" }, { "start_pos": 306, "end_pos": 310, "sequence_org": "LCCLL", "sequence_mut": "ACCAA", "comment": "Abolishes interaction with PPARA and NR1D1. No effect on interaction with CRY1. Abolishes interaction with PPARA and NR1D1 as well as reduces the amplitude of BMAL1 expression; when associated with 1052-E--A-1055.", "evidence": [ { "database": "UniProtKB", "id": "O54943", "url": "https://www.uniprot.org/uniprotkb/O54943" }, { "database": "PubMed", "id": "20159955", "url": "https://pubmed.ncbi.nlm.nih.gov/20159955" } ], "uniprot_canonical_ac": "O54943-1" }, { "start_pos": 306, "end_pos": 310, "sequence_org": "LCCLL", "sequence_mut": "", "comment": "Abolishes interaction with NR1D1.", "evidence": [ { "database": "UniProtKB", "id": "O54943", "url": "https://www.uniprot.org/uniprotkb/O54943" }, { "database": "PubMed", "id": "20159955", "url": "https://pubmed.ncbi.nlm.nih.gov/20159955" } ], "uniprot_canonical_ac": "O54943-1" }, { "start_pos": 292, "end_pos": 292, "sequence_org": "K", "sequence_mut": "A", "comment": "No effect on interaction with PER2.", "evidence": [ { "database": "UniProtKB", "id": "P23204", "url": "https://www.uniprot.org/uniprotkb/P23204" }, { "database": "PubMed", "id": "20159955", "url": "https://pubmed.ncbi.nlm.nih.gov/20159955" } ], "uniprot_canonical_ac": "P23204-1" }, { "start_pos": 459, "end_pos": 468, "sequence_org": "LLQEIYRDMY", "sequence_mut": "", "comment": "Slightly reduces interaction with PER2.", "evidence": [ { "database": "UniProtKB", "id": "P23204", "url": "https://www.uniprot.org/uniprotkb/P23204" }, { "database": "PubMed", "id": "20159955", "url": "https://pubmed.ncbi.nlm.nih.gov/20159955" } ], "uniprot_canonical_ac": "P23204-1" }, { "start_pos": 456, "end_pos": 456, "sequence_org": "K", "sequence_mut": "A", "comment": "Reduces interaction with PER2 by 60%.", "evidence": [ { "database": "UniProtKB", "id": "Q3UV55", "url": "https://www.uniprot.org/uniprotkb/Q3UV55" }, { "database": "PubMed", "id": "20159955", "url": "https://pubmed.ncbi.nlm.nih.gov/20159955" } ], "uniprot_canonical_ac": "Q3UV55-1" } ], "record_id": "pubmed.20159955", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 8 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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Biol. Chem.", "date": "2011", "authors": "Ye Rui, Selby Christopher P, Ozturk Nuri, Annayev Yunus, Sancar Aziz", "reference": { "type": "PubMed", "id": "21613214", "url": "https://pubmed.ncbi.nlm.nih.gov/21613214" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P97784-1", "protein_name": "Cryptochrome-1", "gene_name": "Cry1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q16526-1", "protein_name": "Cryptochrome-1", "gene_name": "CRY1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O54943-1", "protein_name": "Period circadian protein homolog 2", "gene_name": "Per2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O15516-1", "protein_name": "Circadian locomoter output cycles protein kaput", "gene_name": "CLOCK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9WTL8-1", "protein_name": "Basic helix-loop-helix ARNT-like protein 1", "gene_name": "Bmal1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Cryptochromes are critical for the development of coherent circadian rhythms in the mouse suprachiasmatic nucleus.", "journal": "Nature communications", "date": "2013", "authors": "Ono Daisuke, Honma Sato, Honma Ken-ichi", "reference": { "type": "PubMed", "id": "23575670", "url": "https://pubmed.ncbi.nlm.nih.gov/23575670" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P97784-1", "protein_name": "Cryptochrome-1", "gene_name": "Cry1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9R194-1", "protein_name": "Cryptochrome-2", "gene_name": "Cry2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P97784", "url": "https://www.uniprot.org/uniprotkb/P97784" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus 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No effect on repressive activity. Increases protein stability.", "evidence": [ { "database": "UniProtKB", "id": "P97784", "url": "https://www.uniprot.org/uniprotkb/P97784" }, { "database": "PubMed", "id": "24158435", "url": "https://pubmed.ncbi.nlm.nih.gov/24158435" } ], "uniprot_canonical_ac": "P97784-1" } ], "phosphorylation": [ { "start_pos": 588, "end_pos": 588, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "Phosphoserine", "evidence": [ { "database": "UniProtKB", "id": "P97784", "url": "https://www.uniprot.org/uniprotkb/P97784" }, { "database": "PubMed", "id": "24158435", "url": "https://pubmed.ncbi.nlm.nih.gov/24158435" }, { "database": "iPTMnet", "id": "P97784", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P97784" } ], "site_lbl": "Ser588", "uniprot_canonical_ac": "P97784-1" } ], "record_id": "pubmed.24158435", "abstract": "", "glycosylation": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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Exo1 and Apollo and fill-in by POT1b-associated CST.", "journal": "Cell", "date": "2012", "authors": "Wu P, Takai H, de Lange T", "reference": { "type": "PubMed", "id": "22748632", "url": "https://pubmed.ncbi.nlm.nih.gov/22748632" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q5SUQ9-1", "protein_name": "CST complex subunit CTC1", "gene_name": "Ctc1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8C7W7-1", "protein_name": "5' exonuclease Apollo", "gene_name": "Dclre1b", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8K2X3-1", "protein_name": "CST complex subunit STN1", "gene_name": "Stn1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q5SUQ9", "url": "https://www.uniprot.org/uniprotkb/Q5SUQ9" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.22748632", "abstract": "", "glycosylation": [], 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"Maternal depletion of CTCF reveals multiple functions during oocyte and preimplantation embryo development.", "journal": "Development (Cambridge, England)", "date": "2008-08", "authors": "Wan Le-Ben, Pan Hua, Hannenhalli Sridhar, Cheng Yong, Ma Jun, Fedoriw Andrew, Lobanenkov Victor, Latham Keith E, Schultz Richard M, Bartolomei Marisa S", "reference": { "type": "PubMed", "id": "18614575", "url": "https://pubmed.ncbi.nlm.nih.gov/18614575" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q61164-1", "protein_name": "Transcriptional repressor CTCF", "gene_name": "Ctcf", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q61164", "url": "https://www.uniprot.org/uniprotkb/Q61164" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.18614575", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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Rep.", "date": "2016", "authors": "Yu NK, Kim HF, Shim J, Kim S, Kim DW, Kwak C, Sim SE, Choi JH, Ahn S, Yoo J, Choi SL, Jang DJ, Lim CS, Lee YS, Kang C, Choi SY, Kaang BK", "reference": { "type": "PubMed", "id": "26961175", "url": "https://pubmed.ncbi.nlm.nih.gov/26961175" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q61164-1", "protein_name": "Transcriptional repressor CTCF", "gene_name": "Ctcf", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P29037-1", "protein_name": "TATA-box-binding protein", "gene_name": "Tbp", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D945-1", "protein_name": "Protein LLP homolog", "gene_name": "Llph", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9WTI7-1", "protein_name": "Unconventional myosin-Ic", "gene_name": "Myo1c", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q61164", "url": "https://www.uniprot.org/uniprotkb/Q61164" } 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Cell Biol.", "date": "2014", "authors": "Dong F, Shinohara K, Botilde Y, Nabeshima R, Asai Y, Fukumoto A, Hasegawa T, Matsuo M, Takeda H, Shiratori H, Nakamura T, Hamada H", "reference": { "type": "PubMed", "id": "24421334", "url": "https://pubmed.ncbi.nlm.nih.gov/24421334" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A2AC93-1", "protein_name": "Dynein axonemal intermediate chain 2", "gene_name": "Dnai2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q3KNI6-1", "protein_name": "Dynein axonemal assembly factor 6", "gene_name": "Dnaaf6", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "A2AC93", "url": "https://www.uniprot.org/uniprotkb/A2AC93" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.24421334", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], 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"Meiotic catastrophe and retrotransposon reactivation in male germ cells lacking Dnmt3L.", "journal": "Nature", "date": "2004-09-02", "authors": "Bourc'his D\u00e9borah, Bestor Timothy H", "reference": { "type": "PubMed", "id": "15318244", "url": "https://pubmed.ncbi.nlm.nih.gov/15318244" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9CWR8-1", "protein_name": "DNA (cytosine-5)-methyltransferase 3-like", "gene_name": "Dnmt3l", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9CWR8", "url": "https://www.uniprot.org/uniprotkb/Q9CWR8" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.15318244", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } 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region predicts multiple protein isoform-encoding mRNAs.", "journal": "Nat. Genet.", "date": "1992", "authors": "Jansen G, Mahadevan M, Amemiya C, Wormskamp N, Segers B, Hendriks W, O'Hoy K, Baird S, Sabourin L, Lennon G", "reference": { "type": "PubMed", "id": "1302022", "url": "https://pubmed.ncbi.nlm.nih.gov/1302022" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q08274-1", "protein_name": "Dystrophia myotonica WD repeat-containing protein", "gene_name": "Dmwd", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q09013-9", "protein_name": "Myotonin-protein kinase", "gene_name": "DMPK", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54265-1", "protein_name": "Myotonin-protein kinase", "gene_name": "Dmpk", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q08274", "url": "https://www.uniprot.org/uniprotkb/Q08274" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.1302022", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structural organization and developmental expression pattern of the mouse WD-repeat gene DMR-N9 immediately upstream of the myotonic dystrophy locus.", "journal": "Hum. 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