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is a metal-mediated protein-protein interaction.", "journal": "Nature chemical biology", "date": "2006-07", "authors": "Banci Lucia, Bertini Ivano, Cantini Francesca, Felli Isabella C, Gonnelli Leonardo, Hadjiliadis Nick, Pierattelli Roberta, Rosato Antonio, Voulgaris Petros", "reference": { "type": "PubMed", "id": "16732294", "url": "https://pubmed.ncbi.nlm.nih.gov/16732294" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P38636-1", "protein_name": "Copper chaperone ATX1", "gene_name": "ATX1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P38995-1", "protein_name": "Copper-transporting ATPase", "gene_name": "CCC2", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P38636", "url": "https://www.uniprot.org/uniprotkb/P38636" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C 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Mol. 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of a fungal triacetylfusarinine C siderophore transport gene (TAF1) in Saccharomyces cerevisiae as a member of the major facilitator superfamily.", "journal": "Biometals : an international journal on the role of metal ions in biology, biochemistry, and medicine", "date": "1999-12", "authors": "Heymann P, Ernst J F, Winkelmann G", "reference": { "type": "PubMed", "id": "10816729", "url": "https://pubmed.ncbi.nlm.nih.gov/10816729" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P38724-1", "protein_name": "Siderophore iron transporter ARN2", "gene_name": "ARN2", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P38724", "url": "https://www.uniprot.org/uniprotkb/P38724" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C 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isolated as a syntheticlethal in association with an SSM4 deletion.", "journal": "Molecular & general genetics : MGG", "date": "1996-10-28", "authors": "Rouillard J M, Dufour M E, Theunissen B, Mandart E, Dujardin G, Lacroute F", "reference": { "type": "PubMed", "id": "8917313", "url": "https://pubmed.ncbi.nlm.nih.gov/8917313" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P42900-1", "protein_name": "Sigma-like sequence protein 1, mitochondrial", "gene_name": "SLS1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P42900", "url": "https://www.uniprot.org/uniprotkb/P42900" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.8917313", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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Laurence, Rain Jean-Christophe, Jacquier Alain, Fromont-Racine Micheline", "reference": { "type": "PubMed", "id": "16651379", "url": "https://pubmed.ncbi.nlm.nih.gov/16651379" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P47019-1", "protein_name": "Ribosome biogenesis protein ALB1", "gene_name": "ALB1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P38344-1", "protein_name": "Cytoplasmic 60S subunit biogenesis factor REI1", "gene_name": "REI1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P47019", "url": "https://www.uniprot.org/uniprotkb/P47019" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.16651379", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { 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No effect on interaction with YAE1. Strongly decreases iron incorporation into RLI1.", "evidence": [ { "database": "UniProtKB", "id": "P53846", "url": "https://www.uniprot.org/uniprotkb/P53846" }, { "database": "PubMed", "id": "26182403", "url": "https://pubmed.ncbi.nlm.nih.gov/26182403" } ], "uniprot_canonical_ac": "P53846-1" }, { "start_pos": 17, "end_pos": 21, "sequence_org": "GFLEG", "sequence_mut": "AFLEA", "comment": "Slightly decreases interaction with YAE1 and the CIA complex. No effect on iron incorporation into RLI1.", "evidence": [ { "database": "UniProtKB", "id": "P53846", "url": "https://www.uniprot.org/uniprotkb/P53846" }, { "database": "PubMed", "id": "26182403", "url": "https://pubmed.ncbi.nlm.nih.gov/26182403" } ], "uniprot_canonical_ac": "P53846-1" }, { "start_pos": 33, "end_pos": 41, "sequence_org": "GKQYGLQVG", "sequence_mut": "AKQYALQVA", "comment": "Decreases interaction with YAE1 and the CIA complex. Abolishes iron incorporation into RLI1.", "evidence": [ { "database": "UniProtKB", "id": "P53846", "url": "https://www.uniprot.org/uniprotkb/P53846" }, { "database": "PubMed", "id": "26182403", "url": "https://pubmed.ncbi.nlm.nih.gov/26182403" } ], "uniprot_canonical_ac": "P53846-1" }, { "start_pos": 49, "end_pos": 53, "sequence_org": "GQMEG", "sequence_mut": "AQMEA", "comment": "Decreases interaction with YAE1 and the CIA complex. Strongly decreases iron incorporation into RLI1.", "evidence": [ { "database": "UniProtKB", "id": "P53846", "url": "https://www.uniprot.org/uniprotkb/P53846" }, { "database": "PubMed", "id": "26182403", "url": "https://pubmed.ncbi.nlm.nih.gov/26182403" } ], "uniprot_canonical_ac": "P53846-1" }, { "start_pos": 4, "end_pos": 4, "sequence_org": "D", "sequence_mut": "A", "comment": "No effect on interaction with YAE1 or the CIA complex. No effect on iron incorporation into RLI1.", "evidence": [ { "database": "UniProtKB", "id": "P53846", "url": "https://www.uniprot.org/uniprotkb/P53846" }, { "database": "PubMed", "id": "26182403", "url": "https://pubmed.ncbi.nlm.nih.gov/26182403" } ], "uniprot_canonical_ac": "P53846-1" }, { "start_pos": 25, "end_pos": 25, "sequence_org": "C", "sequence_mut": "S", "comment": "Not viable in aerobic conditions. 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Mol. Biol.", "date": "2000", "authors": "Stewart M, Baker R P", "reference": { "type": "PubMed", "id": "10860733", "url": "https://pubmed.ncbi.nlm.nih.gov/10860733" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P47123-1", "protein_name": "Nuclear import protein MOG1", "gene_name": "MOG1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P47123", "url": "https://www.uniprot.org/uniprotkb/P47123" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.10860733", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { 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mating pheromone response of S. cerevisiae.", "journal": "EMBO reports", "date": "2002-12", "authors": "Maytal-Kivity Vered, Piran Ron, Pick Elah, Hofmann Kay, Glickman Michael H", "reference": { "type": "PubMed", "id": "12446563", "url": "https://pubmed.ncbi.nlm.nih.gov/12446563" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P47130-1", "protein_name": "Cop9 signalosome complex subunit 12", "gene_name": "CSN12", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q03981-1", "protein_name": "COP9 signalosome complex subunit 9", "gene_name": "CSN9", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q04368-1", "protein_name": "Cop9 signalosome-interactor 1", "gene_name": "CSI1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q12468-1", "protein_name": "COP9 signalosome complex subunit 5", "gene_name": "RRI1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P40512-1", "protein_name": "Cop9 signalosome complex subunit 11", "gene_name": "PCI8", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q12348-1", "protein_name": "COP9 signalosome complex subunit 10", "gene_name": "RRI2", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P47130", "url": "https://www.uniprot.org/uniprotkb/P47130" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.12446563", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", 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J. Biochem. Cell Biol.", "date": "2003", "authors": "Maytal-Kivity Vered, Pick Elah, Piran Ron, Hofmann Kay, Glickman Michael H", "reference": { "type": "PubMed", "id": "12672462", "url": "https://pubmed.ncbi.nlm.nih.gov/12672462" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P47130-1", "protein_name": "Cop9 signalosome complex subunit 12", "gene_name": "CSN12", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q03981-1", "protein_name": "COP9 signalosome complex subunit 9", "gene_name": "CSN9", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q04368-1", "protein_name": "Cop9 signalosome-interactor 1", "gene_name": "CSI1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q12468-1", "protein_name": "COP9 signalosome complex subunit 5", "gene_name": "RRI1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q12348-1", "protein_name": "COP9 signalosome complex subunit 10", "gene_name": "RRI2", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P47130", "url": "https://www.uniprot.org/uniprotkb/P47130" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.12672462", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", 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"n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A genetic interaction map of RNA-processing factors reveals links between Sem1/Dss1-containing complexes and mRNA export and splicing.", "journal": "Molecular cell", "date": "2008-12-05", "authors": "Wilmes Gwendolyn M, Bergkessel Megan, Bandyopadhyay Sourav, Shales Michael, Braberg Hannes, Cagney Gerard, Collins Sean R, Whitworth Gregg B, Kress Tracy L, Weissman Jonathan S, Ideker Trey, Guthrie Christine, Krogan Nevan J", "reference": { "type": "PubMed", "id": "19061648", "url": "https://pubmed.ncbi.nlm.nih.gov/19061648" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P47130-1", "protein_name": "Cop9 signalosome complex subunit 12", "gene_name": "CSN12", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q12049-1", "protein_name": "Protein THP3", "gene_name": "THP3", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "O94742-1", "protein_name": "26S proteasome complex subunit SEM1", "gene_name": "SEM1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P47130", "url": "https://www.uniprot.org/uniprotkb/P47130" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.19061648", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Sem1 is a functional component of the nuclear pore complex-associated messenger RNA export machinery.", "journal": "The Journal of cell biology", "date": "2009-03-23", "authors": "Faza Marius Boulos, Kemmler Stefan, Jimeno Sonia, Gonz\u00e1lez-Aguilera Cristina, Aguilera Andr\u00e9s, Hurt Ed, Panse Vikram Govind", "reference": { "type": "PubMed", "id": "19289793", "url": "https://pubmed.ncbi.nlm.nih.gov/19289793" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P47130-1", "protein_name": "Cop9 signalosome complex subunit 12", "gene_name": "CSN12", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q12049-1", "protein_name": "Protein THP3", "gene_name": "THP3", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "O94742-1", 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Sci.", "date": "1998", "authors": "Wishart M J, Dixon J E", "reference": { "type": "PubMed", "id": "9757831", "url": "https://pubmed.ncbi.nlm.nih.gov/9757831" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P50946-1", "protein_name": "Putative tyrosine-protein phosphatase OCA1", "gene_name": "OCA1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q9Y6J8-1", "protein_name": "Serine/threonine/tyrosine-interacting-like protein 1", "gene_name": "STYXL1", "tax_name": "Human" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P50946", "url": "https://www.uniprot.org/uniprotkb/P50946" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.9757831", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A screen for genes of heme uptake identifies the FLC family required for import of FAD into the endoplasmic reticulum.", "journal": "J. 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Chem.", "date": "2006", "authors": "Protchenko Olga, Rodriguez-Suarez Roberto, Androphy Rachel, Bussey Howard, Philpott Caroline C", "reference": { "type": "PubMed", "id": "16717099", "url": "https://pubmed.ncbi.nlm.nih.gov/16717099" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P53121-1", "protein_name": "Putative flavin carrier protein 3", "gene_name": "FLC3", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q08967-1", "protein_name": "Flavin carrier protein 1", "gene_name": "FLC1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P39719-1", "protein_name": "Flavin carrier protein 2", "gene_name": "FLC2", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P53121", "url": "https://www.uniprot.org/uniprotkb/P53121" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C 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"authors": "Ruiz Cristina, Escribano Victoria, Morgado Eulalia, Molina Mar\u00eda, Maz\u00f3n Mar\u00eda J", "reference": { "type": "PubMed", "id": "12624196", "url": "https://pubmed.ncbi.nlm.nih.gov/12624196" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P53125-1", "protein_name": "Imitation switch two complex protein 1", "gene_name": "ITC1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "D6VTK4-1", "protein_name": "Pheromone alpha factor receptor", "gene_name": "STE2", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P53125", "url": "https://www.uniprot.org/uniprotkb/P53125" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.12624196", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": 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Genet. 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Biol. Chem.", "date": "2002", "authors": "Tseng Hui-Min, Tomkinson Alan E", "reference": { "type": "PubMed", "id": "12235149", "url": "https://pubmed.ncbi.nlm.nih.gov/12235149" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P53150-1", "protein_name": "Non-homologous end-joining factor LIF1", "gene_name": "LIF1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q08387-1", "protein_name": "DNA ligase 4", "gene_name": "DNL4", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P25615-1", "protein_name": "DNA polymerase IV", "gene_name": "POL4", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P53150", "url": "https://www.uniprot.org/uniprotkb/P53150" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.12235149", "abstract": "", "glycosylation": 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structure of yeast cytochrome c oxidase in a supercomplex with cytochrome bc1.", "journal": "Nat. Struct. Mol. Biol.", "date": "2019", "authors": "Hartley Andrew M, Lukoyanova Natalya, Zhang Yunyi, Cabrera-Orefice Alfredo, Arnold Susanne, Meunier Brigitte, Pinotsis Nikos, Mar\u00e9chal Amandine", "reference": { "type": "PubMed", "id": "30598554", "url": "https://pubmed.ncbi.nlm.nih.gov/30598554" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P53721-1", "protein_name": "Respiratory supercomplex factor 2, mitochondrial", "gene_name": "RCF2", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q03713-1", "protein_name": "Respiratory supercomplex factor 1, mitochondrial", "gene_name": "RCF1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q2V2P9-1", "protein_name": "Cytochrome c oxidase subunit 26, mitochondrial", "gene_name": "COX26", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P00127-1", "protein_name": "Cytochrome b-c1 complex subunit 6, mitochondrial", "gene_name": "QCR6", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": 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"gene_name": "QCR9", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P53721", "url": "https://www.uniprot.org/uniprotkb/P53721" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.30598554", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 24 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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[] } ] }, { "title": "Expression and characterization of the anion transporter homologue YNL275w in Saccharomyces cerevisiae.", "journal": "American journal of physiology. Cell physiology", "date": "2001-07", "authors": "Zhao R, Reithmeier R A", "reference": { "type": "PubMed", "id": "11401825", "url": "https://pubmed.ncbi.nlm.nih.gov/11401825" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P53838-1", "protein_name": "Boron transporter 1", "gene_name": "BOR1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P53838", "url": "https://www.uniprot.org/uniprotkb/P53838" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.11401825", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { 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"glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Enolase activates homotypic vacuole fusion and protein transport to the vacuole in yeast.", "journal": "The Journal of biological chemistry", "date": "2006-05-19", "authors": "Decker Bridget L, Wickner William T", "reference": { "type": "PubMed", "id": "16565073", "url": "https://pubmed.ncbi.nlm.nih.gov/16565073" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P53838-1", "protein_name": "Boron transporter 1", "gene_name": "BOR1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P53838", "url": "https://www.uniprot.org/uniprotkb/P53838" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.16565073", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", 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Cell physiology", "date": "2007-07", "authors": "Jennings Michael L, Howren Todd R, Cui Jian, Winters Maria, Hannigan Robyn", "reference": { "type": "PubMed", "id": "17459946", "url": "https://pubmed.ncbi.nlm.nih.gov/17459946" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P53838-1", "protein_name": "Boron transporter 1", "gene_name": "BOR1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P53838", "url": "https://www.uniprot.org/uniprotkb/P53838" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.17459946", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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Biol.", "date": "2005", "authors": "Lawrence Michael C, Iliades Peter, Fernley Ross T, Berglez Janette, Pilling Patricia A, Macreadie Ian G", "reference": { "type": "PubMed", "id": "15826662", "url": "https://pubmed.ncbi.nlm.nih.gov/15826662" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P53848-1", "protein_name": "Folic acid synthesis protein FOL1", "gene_name": "FOL1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P53848", "url": "https://www.uniprot.org/uniprotkb/P53848" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.15826662", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], 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