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"Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "P08494", "url": "https://www.uniprot.org/uniprotkb/P08494" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus [10116]" } ], "record_id": "pubmed.23445897", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Functional Role of Matrix gla Protein in Glioma Cell Migration.", "journal": "Molecular neurobiology", "date": "2018", "authors": "Fu MH, Wang CY, Hsieh YT, Fang KM, Tzeng SF", "reference": { "type": "PubMed", "id": "28707070", "url": "https://pubmed.ncbi.nlm.nih.gov/28707070" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P08494-1", "protein_name": "Matrix Gla protein", "gene_name": "Mgp", "tax_name": "Rat" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "P08494", "url": "https://www.uniprot.org/uniprotkb/P08494" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus [10116]" } ], "record_id": "pubmed.28707070", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular cloning of matrix Gla protein: implications for substrate recognition by the vitamin K-dependent gamma-carboxylase.", "journal": "Proc. Natl. Acad. Sci. U.S.A.", "date": "1987", "authors": "Price P A, Fraser J D, Metz-Virca G", "reference": { "type": "PubMed", "id": "3317405", "url": "https://pubmed.ncbi.nlm.nih.gov/3317405" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P08494-1", "protein_name": "Matrix Gla protein", "gene_name": "Mgp", "tax_name": "Rat" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "P08494", "url": "https://www.uniprot.org/uniprotkb/P08494" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus [10116]" } ], "record_id": "pubmed.3317405", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Impaired secretion of rat mannose-binding protein resulting from mutations in the collagen-like domain.", "journal": "J. Immunol.", "date": "2000", "authors": "Heise CT, Nicholls JR, Leamy CE, Wallis R", "reference": { "type": "PubMed", "id": "10903744", "url": "https://pubmed.ncbi.nlm.nih.gov/10903744" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P08661-1", "protein_name": "Mannose-binding protein C", "gene_name": "AABR07006691.1; Mbl2", "tax_name": "Rat" }, { "uniprot_canonical_ac": "P19999-1", "protein_name": "Mannose-binding protein A", "gene_name": "Mbl1", "tax_name": "Rat" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "P08661", "url": "https://www.uniprot.org/uniprotkb/P08661" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus [10116]" } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "O-galactosylation", "prediction_tool_list": [], "site_category": "reported", "site_category_dict": { "reported": true }, "site_seq": "K", "relation": "attached", "comment": "O-linked (Gal...) hydroxylysine;O-galactosylation", "icn3d_view": {}, "start_pos": 44, "start_aa": "Lys", "end_pos": 44, "end_aa": "Lys", "residue": "Lys", "site_lbl": "Lys44", "evidence": [ { "id": "P19999", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P19999#ptm_processing" }, { "id": "10903744", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10903744" }, { "id": "25419660", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/25419660" } ], "filter_code": "000000000001000000000.00000100000000.00.01100", "uniprot_canonical_ac": "P19999-1" }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "O-galactosylation", "prediction_tool_list": [], "site_category": "reported", "site_category_dict": { "reported": true }, "site_seq": "K", "relation": "attached", "comment": "O-linked (Gal...) hydroxylysine;O-galactosylation", "icn3d_view": {}, "start_pos": 47, "start_aa": "Lys", "end_pos": 47, "end_aa": "Lys", "residue": "Lys", "site_lbl": "Lys47", "evidence": [ { "id": "P19999", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P19999#ptm_processing" }, { "id": "25419660", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/25419660" }, { "id": "10903744", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10903744" } ], "filter_code": "000000000001000000000.00000100000000.00.01100", "uniprot_canonical_ac": "P19999-1" } ], "mutagenesis": [ { "start_pos": 40, "end_pos": 40, "sequence_org": "R", "sequence_mut": "C", "comment": "Prevents higher-order oligomer assembly. Slight reduction in secretion rate.", "evidence": [ { "database": "UniProtKB", "id": "P19999", "url": "https://www.uniprot.org/uniprotkb/P19999" }, { "database": "PubMed", "id": "10903744", "url": "https://pubmed.ncbi.nlm.nih.gov/10903744" } ], "uniprot_canonical_ac": "P19999-1" }, { "start_pos": 42, "end_pos": 42, "sequence_org": "G", "sequence_mut": "E", "comment": "Disrupts homotrimer formation. 5-fold reduction in secretion rate. Prevents K-44 hydroxylation and glycosylation. 10-fold decrease in complement activation.", "evidence": [ { "database": "UniProtKB", "id": "P19999", "url": "https://www.uniprot.org/uniprotkb/P19999" }, { "database": "PubMed", "id": "10903744", "url": "https://pubmed.ncbi.nlm.nih.gov/10903744" } ], "uniprot_canonical_ac": "P19999-1" }, { "start_pos": 44, "end_pos": 44, "sequence_org": "K", "sequence_mut": "R", "comment": "No effect on secretion rate, nor on homooligomer formation. 3-fold reduction in secretion rate; when associated with R-47. Prevents higher-order oligomer assembly; when associated with R-47. 10-fold decrease in complement activation; when associated with R-47.", "evidence": [ { "database": "UniProtKB", "id": "P19999", "url": "https://www.uniprot.org/uniprotkb/P19999" }, { "database": "PubMed", "id": "10903744", "url": "https://pubmed.ncbi.nlm.nih.gov/10903744" } ], "uniprot_canonical_ac": "P19999-1" }, { "start_pos": 45, "end_pos": 45, "sequence_org": "G", "sequence_mut": "D", "comment": "Disrupts homotrimer formation. 5-fold reduction in secretion rate. Prevents K-47 hydroxylation and glycosylation.", "evidence": [ { "database": "UniProtKB", "id": "P19999", "url": "https://www.uniprot.org/uniprotkb/P19999" }, { "database": "PubMed", "id": "10903744", "url": "https://pubmed.ncbi.nlm.nih.gov/10903744" } ], "uniprot_canonical_ac": "P19999-1" }, { "start_pos": 47, "end_pos": 47, "sequence_org": "K", "sequence_mut": "R", "comment": "No effect on secretion rate, nor on homooligomer formation. 3-fold reduction in secretion rate; when associated with R-44. 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Implications for multivalent ligand recognition.", "journal": "The Journal of biological chemistry", "date": "2002", "authors": "Ng KK, Kolatkar AR, Park-Snyder S, Feinberg H, Clark DA, Drickamer K, Weis WI", "reference": { "type": "PubMed", "id": "11850428", "url": "https://pubmed.ncbi.nlm.nih.gov/11850428" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P08661-1", "protein_name": "Mannose-binding protein C", "gene_name": "AABR07006691.1; Mbl2", "tax_name": "Rat" }, { "uniprot_canonical_ac": "P19999-1", "protein_name": "Mannose-binding protein A", "gene_name": "Mbl1", "tax_name": "Rat" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "P08661", "url": "https://www.uniprot.org/uniprotkb/P08661" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus [10116]" } ], "record_id": "pubmed.11850428", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Characterization of rat liver mannan-binding protein gene.", "journal": "J. Biochem.", "date": "1992", "authors": "Wada M, Itoh N, Ohta M, Kawasaki T", "reference": { "type": "PubMed", "id": "1607365", "url": "https://pubmed.ncbi.nlm.nih.gov/1607365" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P08661-1", "protein_name": "Mannose-binding protein C", "gene_name": "AABR07006691.1; Mbl2", "tax_name": "Rat" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "P08661", "url": "https://www.uniprot.org/uniprotkb/P08661" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus [10116]" } ], "record_id": "pubmed.1607365", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Near-planar solution structures of mannose-binding lectin oligomers provide insight on activation of lectin pathway of complement.", "journal": "J. Biol. Chem.", "date": "2012", "authors": "Miller A, Phillips A, Gor J, Wallis R, Perkins SJ", "reference": { "type": "PubMed", "id": "22167201", "url": "https://pubmed.ncbi.nlm.nih.gov/22167201" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P08661-1", "protein_name": "Mannose-binding protein C", "gene_name": "AABR07006691.1; Mbl2", "tax_name": "Rat" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "P08661", "url": "https://www.uniprot.org/uniprotkb/P08661" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus [10116]" } ], "record_id": "pubmed.22167201", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Mannose-binding proteins isolated from rat liver contain carbohydrate-recognition domains linked to collagenous tails. Complete primary structures and homology with pulmonary surfactant apoprotein.", "journal": "The Journal of biological chemistry", "date": "1986", "authors": "Drickamer K, Dordal MS, Reynolds L", "reference": { "type": "PubMed", "id": "3009480", "url": "https://pubmed.ncbi.nlm.nih.gov/3009480" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P08661-1", "protein_name": "Mannose-binding protein C", "gene_name": "AABR07006691.1; Mbl2", "tax_name": "Rat" }, { "uniprot_canonical_ac": "P19999-1", "protein_name": "Mannose-binding protein A", "gene_name": "Mbl1", "tax_name": "Rat" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "P08661", "url": "https://www.uniprot.org/uniprotkb/P08661" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus [10116]" } ], "record_id": "pubmed.3009480", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Primary structure of rat liver mannan-binding protein deduced from its cDNA sequence.", "journal": "J. 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chain acyl-coenzyme A, and isovaleryl-coenzyme A dehydrogenases. Sequence homology of four enzymes of the acyl-CoA dehydrogenase family.", "journal": "J. Biol. Chem.", "date": "1989", "authors": "Matsubara Y, Indo Y, Naito E, Ozasa H, Glassberg R, Vockley J, Ikeda Y, Kraus J, Tanaka K", "reference": { "type": "PubMed", "id": "2777793", "url": "https://pubmed.ncbi.nlm.nih.gov/2777793" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P12007-1", "protein_name": "Isovaleryl-CoA dehydrogenase, mitochondrial", "gene_name": "Ivd", "tax_name": "Rat" }, { "uniprot_canonical_ac": "P15650-1", "protein_name": "Long-chain specific acyl-CoA dehydrogenase, mitochondrial", "gene_name": "Acadl", "tax_name": "Rat" }, { "uniprot_canonical_ac": "P15651-1", "protein_name": "Short-chain specific acyl-CoA dehydrogenase, mitochondrial", "gene_name": "Acads", "tax_name": "Rat" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "P12007", "url": "https://www.uniprot.org/uniprotkb/P12007" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus 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Yang-Feng TL, Glassberg R, Ito M, Ikeda Y, Mole J, Francke U, Tanaka K", "reference": { "type": "PubMed", "id": "3446585", "url": "https://pubmed.ncbi.nlm.nih.gov/3446585" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P12007-1", "protein_name": "Isovaleryl-CoA dehydrogenase, mitochondrial", "gene_name": "Ivd", "tax_name": "Rat" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "P12007", "url": "https://www.uniprot.org/uniprotkb/P12007" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus [10116]" } ], "record_id": "pubmed.3446585", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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Biol. 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "Induction of indirect donor-specific hyporesponsiveness by transportal RT1-peptide pulse in rat skin transplantation.", "journal": "Transplant international : official journal of the European Society for Organ Transplantation", "date": "2003-08", "authors": "Yamamura Masao, Yagi Takahito, Iwagaki Hiromi, Mitsuoka Naoshi, Jie Liu, Sheng Sun Dong, Matsuda Hiroaki, Sadamori Hiroshi, Inagaki Masaru, Tanaka Noriaki", "reference": { "type": "PubMed", "id": "12719799", "url": "https://pubmed.ncbi.nlm.nih.gov/12719799" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P16391-1", "protein_name": "RT1 class I histocompatibility antigen, AA alpha chain", "gene_name": "", "tax_name": "Rat" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "P16391", "url": "https://www.uniprot.org/uniprotkb/P16391" } ], "common_name": "Rat", "glygen_name": "Rat", 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after cardiac allograft rejection.", "journal": "Transplantation", "date": "1995-02-15", "authors": "Shirwan H, Leamer M, Wang H K, Makowka L, Cramer D V", "reference": { "type": "PubMed", "id": "7871571", "url": "https://pubmed.ncbi.nlm.nih.gov/7871571" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P16391-1", "protein_name": "RT1 class I histocompatibility antigen, AA alpha chain", "gene_name": "", "tax_name": "Rat" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "P16391", "url": "https://www.uniprot.org/uniprotkb/P16391" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus [10116]" } ], "record_id": "pubmed.7871571", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The Mx GTPase family of interferon-induced antiviral proteins.", "journal": "Microbes Infect.", "date": "2007", "authors": "Haller Otto, Stertz Silke, Kochs Georg", "reference": { "type": "PubMed", "id": "18062906", "url": "https://pubmed.ncbi.nlm.nih.gov/18062906" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P18589-1", "protein_name": "Interferon-induced GTP-binding protein Mx2", "gene_name": "Mx2", "tax_name": "Rat" }, { "uniprot_canonical_ac": "P20592-1", "protein_name": "Interferon-induced GTP-binding protein Mx2", "gene_name": "MX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20591-1", "protein_name": "Interferon-induced GTP-binding protein Mx1", "gene_name": "MX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "A7VK00-1", "protein_name": "Interferon-induced GTP-binding protein Mx2", "gene_name": "MX2", "tax_name": "Pig" }, { "uniprot_canonical_ac": "P27594-1", "protein_name": "Interferon-induced GTP-binding protein Mx1", "gene_name": "MX1", "tax_name": "Pig" }, { "uniprot_canonical_ac": "P79135-1", "protein_name": "Interferon-induced GTP-binding protein Mx1", "gene_name": "MX1", "tax_name": "Bovine" }, { "uniprot_canonical_ac": "Q9BDI7-1", "protein_name": "Interferon-induced GTP-binding protein Mx2", "gene_name": "MX2", "tax_name": "Bovine" }, { "uniprot_canonical_ac": "Q9WVP9-1", "protein_name": "Interferon-induced GTP-binding protein Mx2", "gene_name": "Mx2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P18588-1", "protein_name": "Interferon-induced GTP-binding protein Mx1", "gene_name": "Mx1", "tax_name": "Rat" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "P18589", "url": "https://www.uniprot.org/uniprotkb/P18589" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus [10116]" } ], "record_id": "pubmed.18062906", "abstract": "", 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Commun.", "date": "1991", "authors": "Rahden-Staron I, Laval F", "reference": { "type": "PubMed", "id": "2049083", "url": "https://pubmed.ncbi.nlm.nih.gov/2049083" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P24528-1", "protein_name": "Methylated-DNA--protein-cysteine methyltransferase", "gene_name": "Mgmt", "tax_name": "Rat" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "P24528", "url": "https://www.uniprot.org/uniprotkb/P24528" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus [10116]" } ], "record_id": "pubmed.2049083", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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