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Physiol. 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"The early response gene NGFI-C encodes a zinc finger transcriptional activator and is a member of the GCGGGGGCG (GSG) element-binding protein family.", "journal": "Molecular and cellular biology", "date": "1991", "authors": "Crosby SD, Puetz JJ, Simburger KS, Fahrner TJ, Milbrandt J", "reference": { "type": "PubMed", "id": "2072895", "url": "https://pubmed.ncbi.nlm.nih.gov/2072895" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O00141-1", "protein_name": "Serine/threonine-protein kinase Sgk1", "gene_name": "SGK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15742-1", "protein_name": "NGFI-A-binding protein 2", "gene_name": "NAB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7LC44-1", "protein_name": "Activity-regulated cytoskeleton-associated protein", "gene_name": "ARC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17275-1", "protein_name": "Transcription factor JunB", "gene_name": "JUNB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18846-1", "protein_name": "Cyclic AMP-dependent transcription factor ATF-1", "gene_name": "ATF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15336-1", "protein_name": "Cyclic AMP-dependent transcription factor ATF-2", "gene_name": "ATF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18146-1", "protein_name": "Early growth response protein 1", "gene_name": "EGR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50553-1", "protein_name": "Achaete-scute homolog 1", "gene_name": "ASCL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13319-1", "protein_name": "Cyclin-dependent kinase 5 activator 2", "gene_name": "CDK5R2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53539-1", "protein_name": "Protein FosB", "gene_name": "FOSB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P47928-1", "protein_name": "DNA-binding protein inhibitor ID-4", "gene_name": "ID4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11831-1", "protein_name": "Serum response factor", "gene_name": "SRF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41134-1", "protein_name": "DNA-binding protein inhibitor ID-1", "gene_name": "ID1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00911-1", "protein_name": "Early growth response protein 4", "gene_name": "Egr4", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q15078-1", "protein_name": "Cyclin-dependent kinase 5 activator 1", "gene_name": "CDK5R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99963-1", "protein_name": "Endophilin-A3", "gene_name": "SH3GL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99081-1", "protein_name": "Transcription factor 12", "gene_name": "TCF12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14839-1", "protein_name": "ATP-dependent chromatin remodeler CHD4", "gene_name": "CHD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14814-1", "protein_name": "Myocyte-specific enhancer factor 2D", "gene_name": "MEF2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15240-1", "protein_name": "Neurosecretory protein VGF", "gene_name": "VGF", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02535-1", "protein_name": "DNA-binding protein inhibitor ID-3", "gene_name": "ID3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12980-1", "protein_name": "Protein lyl-1", "gene_name": "LYL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06889-1", "protein_name": "Early growth response protein 3", "gene_name": "EGR3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q05215-1", "protein_name": "Early growth response protein 4", "gene_name": "EGR4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50570-1", "protein_name": "Dynamin-2", "gene_name": "DNM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09472-1", "protein_name": "Histone acetyltransferase p300", "gene_name": "EP300", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17535-1", "protein_name": "Transcription factor JunD", "gene_name": "JUND", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15407-1", "protein_name": "Fos-related antigen 1", "gene_name": "FOSL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17752-1", "protein_name": "Tryptophan 5-hydroxylase 1", "gene_name": "TPH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00535-1", "protein_name": "Cyclin-dependent kinase 5", "gene_name": "CDK5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19419-1", "protein_name": "ETS domain-containing protein Elk-1", "gene_name": "ELK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13506-1", "protein_name": "NGFI-A-binding protein 1", "gene_name": "NAB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RU8-1", "protein_name": "Tribbles homolog 1", "gene_name": "TRIB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02363-1", "protein_name": "DNA-binding protein inhibitor ID-2", "gene_name": "ID2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55042-1", "protein_name": "GTP-binding protein RAD", "gene_name": "RRAD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13127-1", "protein_name": "RE1-silencing transcription factor", "gene_name": "REST", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11161-1", "protein_name": "E3 SUMO-protein ligase EGR2", "gene_name": "EGR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13726-1", "protein_name": "Tissue factor", "gene_name": "F3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01100-1", "protein_name": "Protein c-Fos", "gene_name": "FOS", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O00141", "url": "https://www.uniprot.org/uniprotkb/O00141" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.2072895", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 39 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Interaction of serum- and glucocorticoid regulated kinase 1 (SGK1) with the WW-domains of Nedd4-2 is required for epithelial sodium channel regulation.", "journal": "PloS one", "date": "2010", "authors": "Wiemuth D, Lott JS, Ly K, Ke Y, Teesdale-Spittle P, Snyder PM, McDonald FJ", "reference": { "type": "PubMed", "id": "20730100", "url": "https://pubmed.ncbi.nlm.nih.gov/20730100" }, "referenced_glycans": 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"title": "Second AKT: the rise of SGK in cancer signalling.", "journal": "Growth Factors", "date": "2010", "authors": "Bruhn MA, Pearson RB, Hannan RD, Sheppard KE", "reference": { "type": "PubMed", "id": "20919962", "url": "https://pubmed.ncbi.nlm.nih.gov/20919962" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O00141-1", "protein_name": "Serine/threonine-protein kinase Sgk1", "gene_name": "SGK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBY8-2", "protein_name": "Serine/threonine-protein kinase Sgk2", "gene_name": "SGK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BR1-1", "protein_name": "Serine/threonine-protein kinase Sgk3", "gene_name": "SGK3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O00141", "url": "https://www.uniprot.org/uniprotkb/O00141" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.20919962", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Synaptic activity-responsive element (SARE): A unique genomic structure with an unusual sensitivity to neuronal activity.", "journal": "Communicative & integrative biology", "date": "2010", "authors": "Inoue M, Yagishita-Kyo N, Nonaka M, Kawashima T, Okuno H, Bito H", "reference": { "type": "PubMed", "id": "21057636", "url": "https://pubmed.ncbi.nlm.nih.gov/21057636" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O00141-1", "protein_name": "Serine/threonine-protein kinase Sgk1", "gene_name": "SGK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15742-1", "protein_name": "NGFI-A-binding protein 2", "gene_name": "NAB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7LC44-1", "protein_name": "Activity-regulated cytoskeleton-associated protein", "gene_name": "ARC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17275-1", "protein_name": "Transcription factor JunB", "gene_name": "JUNB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18846-1", "protein_name": "Cyclic AMP-dependent transcription factor ATF-1", "gene_name": "ATF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15336-1", "protein_name": "Cyclic AMP-dependent transcription factor ATF-2", "gene_name": "ATF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18146-1", "protein_name": "Early growth response protein 1", "gene_name": "EGR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50553-1", "protein_name": "Achaete-scute homolog 1", "gene_name": "ASCL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13319-1", "protein_name": "Cyclin-dependent kinase 5 activator 2", "gene_name": "CDK5R2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53539-1", "protein_name": "Protein FosB", "gene_name": "FOSB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P47928-1", "protein_name": "DNA-binding protein inhibitor ID-4", "gene_name": "ID4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11831-1", "protein_name": "Serum response factor", "gene_name": "SRF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41134-1", "protein_name": "DNA-binding protein inhibitor ID-1", "gene_name": "ID1", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"protein_name": "Tissue factor", "gene_name": "F3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01100-1", "protein_name": "Protein c-Fos", "gene_name": "FOS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46937-1", "protein_name": "Transcriptional coactivator YAP1", "gene_name": "YAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZV5-1", "protein_name": "WW domain-containing transcription regulator protein 1", "gene_name": "WWTR1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O00141", "url": "https://www.uniprot.org/uniprotkb/O00141" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.21326363", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 63 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "VGF: an inducible gene product, precursor of a diverse array of neuro-endocrine peptides and tissue-specific disease biomarkers.", "journal": "Journal of chemical neuroanatomy", "date": "2011", "authors": "Ferri GL, Noli B, Brancia C, D'Amato F, Cocco C", "reference": { "type": "PubMed", "id": "21621608", "url": "https://pubmed.ncbi.nlm.nih.gov/21621608" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O00141-1", 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"gene_name": "EGR4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50570-1", "protein_name": "Dynamin-2", "gene_name": "DNM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09472-1", "protein_name": "Histone acetyltransferase p300", "gene_name": "EP300", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17535-1", "protein_name": "Transcription factor JunD", "gene_name": "JUND", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15407-1", "protein_name": "Fos-related antigen 1", "gene_name": "FOSL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17752-1", "protein_name": "Tryptophan 5-hydroxylase 1", "gene_name": "TPH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00535-1", "protein_name": "Cyclin-dependent kinase 5", "gene_name": "CDK5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19419-1", "protein_name": "ETS domain-containing protein Elk-1", "gene_name": "ELK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13506-1", "protein_name": "NGFI-A-binding 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Mdm2 and Mdm4 is critical for regulating p53 activity during embryogenesis but dispensable for p53 and Mdm2 stability.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2011", "authors": "Pant V, Xiong S, Iwakuma T, Quintas-Cardama A, Lozano G", "reference": { "type": "PubMed", "id": "21730132", "url": "https://pubmed.ncbi.nlm.nih.gov/21730132" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O00141-1", "protein_name": "Serine/threonine-protein kinase Sgk1", "gene_name": "SGK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UER7-1", "protein_name": "Death domain-associated protein 6", "gene_name": "DAXX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q969K3-1", "protein_name": "E3 ubiquitin-protein ligase RNF34", "gene_name": "RNF34", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": 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Mdm4", "gene_name": "MDM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00257-1", "protein_name": "E3 SUMO-protein ligase CBX4", "gene_name": "CBX4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99683-1", "protein_name": "Mitogen-activated protein kinase kinase kinase 5", "gene_name": "MAP3K5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00987-1", "protein_name": "E3 ubiquitin-protein ligase Mdm2", "gene_name": "MDM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30154-1", "protein_name": "Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform", "gene_name": "PPP2R1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O96017-1", "protein_name": "Serine/threonine-protein kinase Chk2", "gene_name": "CHEK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15530-1", "protein_name": "3-phosphoinositide-dependent protein 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"species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O00141", "url": "https://www.uniprot.org/uniprotkb/O00141" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.21986495", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 119 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Early growth response 1--a transcription factor in the crossfire of signal transduction cascades.", "journal": "Indian journal of biochemistry & biophysics", "date": "2011", "authors": "Pagel JI, Deindl E", "reference": { "type": "PubMed", "id": "22053691", "url": "https://pubmed.ncbi.nlm.nih.gov/22053691" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O00141-1", "protein_name": "Serine/threonine-protein kinase Sgk1", "gene_name": "SGK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15742-1", "protein_name": "NGFI-A-binding protein 2", "gene_name": "NAB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SQ4-1", "protein_name": "Adhesion G protein-coupled receptor G6", "gene_name": "ADGRG6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7LC44-1", "protein_name": "Activity-regulated cytoskeleton-associated protein", "gene_name": "ARC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51532-1", "protein_name": "SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4", "gene_name": "SMARCA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17275-1", "protein_name": "Transcription factor JunB", "gene_name": "JUNB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18846-1", "protein_name": "Cyclic AMP-dependent transcription factor ATF-1", "gene_name": "ATF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15336-1", "protein_name": "Cyclic AMP-dependent transcription factor ATF-2", "gene_name": "ATF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18146-1", "protein_name": "Early growth response protein 1", "gene_name": "EGR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50553-1", "protein_name": "Achaete-scute homolog 1", "gene_name": "ASCL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56693-1", "protein_name": "Transcription factor SOX-10", "gene_name": "SOX10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13319-1", "protein_name": "Cyclin-dependent kinase 5 activator 2", "gene_name": "CDK5R2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53539-1", "protein_name": "Protein FosB", "gene_name": "FOSB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXG9-1", "protein_name": "Adhesion G protein-coupled receptor V1", "gene_name": "ADGRV1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P47928-1", "protein_name": "DNA-binding protein inhibitor ID-4", "gene_name": "ID4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11831-1", "protein_name": "Serum response factor", "gene_name": "SRF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41134-1", "protein_name": "DNA-binding protein inhibitor ID-1", "gene_name": "ID1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SK9-1", "protein_name": "Stearoyl-CoA desaturase 5", "gene_name": "SCD5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15078-1", "protein_name": "Cyclin-dependent 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"P11047-1", "protein_name": "Laminin subunit gamma-1", "gene_name": "LAMC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14814-1", "protein_name": "Myocyte-specific enhancer factor 2D", "gene_name": "MEF2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46939-1", "protein_name": "Utrophin", "gene_name": "UTRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15240-1", "protein_name": "Neurosecretory protein VGF", "gene_name": "VGF", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01453-1", "protein_name": "Peripheral myelin protein 22", "gene_name": "PMP22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02535-1", "protein_name": "DNA-binding protein inhibitor ID-3", "gene_name": "ID3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20916-1", "protein_name": "Myelin-associated glycoprotein", "gene_name": "MAG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12980-1", "protein_name": "Protein lyl-1", "gene_name": "LYL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06889-1", "protein_name": "Early growth response protein 3", "gene_name": "EGR3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q05215-1", "protein_name": "Early growth response protein 4", "gene_name": "EGR4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50570-1", "protein_name": "Dynamin-2", "gene_name": "DNM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09472-1", "protein_name": "Histone acetyltransferase p300", "gene_name": "EP300", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17535-1", "protein_name": "Transcription factor JunD", "gene_name": "JUND", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15407-1", "protein_name": "Fos-related antigen 1", "gene_name": "FOSL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02686-1", "protein_name": "Myelin basic protein", "gene_name": "MBP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16850-1", "protein_name": "Lanosterol 14-alpha demethylase", "gene_name": "CYP51A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17752-1", "protein_name": "Tryptophan 5-hydroxylase 1", "gene_name": "TPH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00535-1", "protein_name": "Cyclin-dependent kinase 5", "gene_name": "CDK5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92769-1", "protein_name": "Histone deacetylase 2", "gene_name": "HDAC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19419-1", "protein_name": "ETS domain-containing protein Elk-1", "gene_name": "ELK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13506-1", "protein_name": "NGFI-A-binding protein 1", "gene_name": "NAB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXM0-1", "protein_name": "Periaxin", "gene_name": "PRX", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25189-1", "protein_name": "Myelin protein P0", "gene_name": "MPZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q03052-1", "protein_name": "POU domain, class 3, transcription factor 1", "gene_name": "POU3F1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04035-1", "protein_name": "3-hydroxy-3-methylglutaryl-coenzyme A reductase", "gene_name": "HMGCR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RU8-1", "protein_name": "Tribbles homolog 1", "gene_name": "TRIB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28347-1", "protein_name": "Transcriptional enhancer factor TEF-1", "gene_name": "TEAD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02363-1", "protein_name": "DNA-binding protein inhibitor ID-2", "gene_name": "ID2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55042-1", "protein_name": "GTP-binding protein RAD", "gene_name": "RRAD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13474-1", "protein_name": "Dystrophin-related protein 2", "gene_name": "DRP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20265-1", "protein_name": "POU domain, class 3, transcription factor 2", "gene_name": "POU3F2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13127-1", "protein_name": "RE1-silencing transcription factor", "gene_name": "REST", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11161-1", "protein_name": "E3 SUMO-protein ligase EGR2", "gene_name": "EGR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13726-1", "protein_name": "Tissue factor", "gene_name": "F3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01100-1", "protein_name": "Protein c-Fos", "gene_name": "FOS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46937-1", "protein_name": "Transcriptional coactivator YAP1", "gene_name": "YAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZV5-1", "protein_name": "WW domain-containing transcription regulator protein 1", "gene_name": "WWTR1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O00141", "url": "https://www.uniprot.org/uniprotkb/O00141" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.22053691", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 63 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Global expression analysis identified a preferentially nerve growth factor-induced transcriptional program regulated by sustained mitogen-activated protein kinase/extracellular signal-regulated kinase (ERK) and AP-1 protein activation during PC12 cell differentiation.", "journal": "The Journal of biological chemistry", "date": "2011", "authors": "Mullenbrock S, Shah J, Cooper GM", "reference": { "type": "PubMed", "id": "22065583", "url": "https://pubmed.ncbi.nlm.nih.gov/22065583" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O00141-1", "protein_name": "Serine/threonine-protein kinase Sgk1", "gene_name": "SGK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15742-1", "protein_name": "NGFI-A-binding protein 2", "gene_name": "NAB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28482-1", "protein_name": "Mitogen-activated protein kinase 1", "gene_name": "MAPK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7LC44-1", "protein_name": "Activity-regulated cytoskeleton-associated protein", "gene_name": "ARC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17275-1", "protein_name": 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"uniprot_canonical_ac": "P27361-1", "protein_name": "Mitogen-activated protein kinase 3", "gene_name": "MAPK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13127-1", "protein_name": "RE1-silencing transcription factor", "gene_name": "REST", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11161-1", "protein_name": "E3 SUMO-protein ligase EGR2", "gene_name": "EGR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13726-1", "protein_name": "Tissue factor", "gene_name": "F3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01100-1", "protein_name": "Protein c-Fos", "gene_name": "FOS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15056-1", "protein_name": "Serine/threonine-protein kinase B-raf", "gene_name": "BRAF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31946-1", "protein_name": "14-3-3 protein beta/alpha", "gene_name": "YWHAB", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": 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"protein_name": "DNA-binding protein inhibitor ID-2", "gene_name": "ID2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55042-1", "protein_name": "GTP-binding protein RAD", "gene_name": "RRAD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13127-1", "protein_name": "RE1-silencing transcription factor", "gene_name": "REST", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11161-1", "protein_name": "E3 SUMO-protein ligase EGR2", "gene_name": "EGR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13726-1", "protein_name": "Tissue factor", "gene_name": "F3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20156-1", "protein_name": "Neurosecretory protein VGF", "gene_name": "Vgf", "tax_name": "Rat" }, { "uniprot_canonical_ac": "P01100-1", "protein_name": "Protein c-Fos", "gene_name": "FOS", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O00141", "url": "https://www.uniprot.org/uniprotkb/O00141" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.25569790", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 39 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arc is a flexible modular protein capable of reversible self-oligomerization.", "journal": "The Biochemical journal", "date": "2015", "authors": "Myrum C, Baumann A, Bustad HJ, Flydal MI, Mariaule V, Alvira S, Cuellar J, Haavik J, Soule J, Valpuesta JM, Marquez JA, Martinez A, Bramham CR", "reference": { "type": "PubMed", "id": "25748042", "url": "https://pubmed.ncbi.nlm.nih.gov/25748042" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O00141-1", "protein_name": "Serine/threonine-protein kinase Sgk1", "gene_name": "SGK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15742-1", "protein_name": "NGFI-A-binding protein 2", "gene_name": "NAB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7LC44-1", "protein_name": "Activity-regulated cytoskeleton-associated protein", "gene_name": "ARC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17275-1", "protein_name": "Transcription factor JunB", "gene_name": "JUNB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18846-1", "protein_name": 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"tax_name": "Human" }, { "uniprot_canonical_ac": "P41134-1", "protein_name": "DNA-binding protein inhibitor ID-1", "gene_name": "ID1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15078-1", "protein_name": "Cyclin-dependent kinase 5 activator 1", "gene_name": "CDK5R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99963-1", "protein_name": "Endophilin-A3", "gene_name": "SH3GL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99081-1", "protein_name": "Transcription factor 12", "gene_name": "TCF12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14839-1", "protein_name": "ATP-dependent chromatin remodeler CHD4", "gene_name": "CHD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14814-1", "protein_name": "Myocyte-specific enhancer factor 2D", "gene_name": "MEF2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15240-1", "protein_name": "Neurosecretory protein VGF", "gene_name": "VGF", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02535-1", "protein_name": 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"authors": "Possenti R, Eldridge JD, Paterson BM, Grasso A, Levi A", "reference": { "type": "PubMed", "id": "2676516", "url": "https://pubmed.ncbi.nlm.nih.gov/2676516" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O00141-1", "protein_name": "Serine/threonine-protein kinase Sgk1", "gene_name": "SGK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15742-1", "protein_name": "NGFI-A-binding protein 2", "gene_name": "NAB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7LC44-1", "protein_name": "Activity-regulated cytoskeleton-associated protein", "gene_name": "ARC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17275-1", "protein_name": "Transcription factor JunB", "gene_name": "JUNB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18846-1", "protein_name": "Cyclic AMP-dependent transcription factor ATF-1", "gene_name": "ATF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15336-1", "protein_name": "Cyclic AMP-dependent 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"uniprot_canonical_ac": "Q15078-1", "protein_name": "Cyclin-dependent kinase 5 activator 1", "gene_name": "CDK5R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99963-1", "protein_name": "Endophilin-A3", "gene_name": "SH3GL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99081-1", "protein_name": "Transcription factor 12", "gene_name": "TCF12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14839-1", "protein_name": "ATP-dependent chromatin remodeler CHD4", "gene_name": "CHD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14814-1", "protein_name": "Myocyte-specific enhancer factor 2D", "gene_name": "MEF2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15240-1", "protein_name": "Neurosecretory protein VGF", "gene_name": "VGF", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02535-1", "protein_name": "DNA-binding protein inhibitor ID-3", "gene_name": "ID3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12980-1", "protein_name": "Protein lyl-1", "gene_name": "LYL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06889-1", "protein_name": "Early growth response protein 3", "gene_name": "EGR3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q05215-1", "protein_name": "Early growth response protein 4", "gene_name": "EGR4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50570-1", "protein_name": "Dynamin-2", "gene_name": "DNM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09472-1", "protein_name": "Histone acetyltransferase p300", "gene_name": "EP300", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17535-1", "protein_name": "Transcription factor JunD", "gene_name": "JUND", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15407-1", "protein_name": "Fos-related antigen 1", "gene_name": "FOSL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17752-1", "protein_name": "Tryptophan 5-hydroxylase 1", "gene_name": "TPH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00535-1", "protein_name": "Cyclin-dependent kinase 5", "gene_name": "CDK5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19419-1", "protein_name": "ETS domain-containing protein Elk-1", "gene_name": "ELK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13506-1", "protein_name": "NGFI-A-binding protein 1", "gene_name": "NAB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RU8-1", "protein_name": "Tribbles homolog 1", "gene_name": "TRIB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02363-1", "protein_name": "DNA-binding protein inhibitor ID-2", "gene_name": "ID2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55042-1", "protein_name": "GTP-binding protein RAD", "gene_name": "RRAD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13127-1", "protein_name": "RE1-silencing transcription factor", "gene_name": "REST", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11161-1", "protein_name": "E3 SUMO-protein ligase EGR2", "gene_name": "EGR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13726-1", "protein_name": "Tissue factor", "gene_name": "F3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20156-1", "protein_name": "Neurosecretory protein VGF", "gene_name": "Vgf", "tax_name": "Rat" }, { "uniprot_canonical_ac": "P01100-1", "protein_name": "Protein c-Fos", "gene_name": "FOS", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O00141", "url": "https://www.uniprot.org/uniprotkb/O00141" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.2676516", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 39 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ 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[] } ] }, { "title": "Structural Basis for Substrate Selectivity of the E3 Ligase COP1.", "journal": "Structure (London, England : 1993)", "date": "2016", "authors": "Uljon S, Xu X, Durzynska I, Stein S, Adelmant G, Marto JA, Pear WS, Blacklow SC", "reference": { "type": "PubMed", "id": "27041596", "url": "https://pubmed.ncbi.nlm.nih.gov/27041596" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O00141-1", "protein_name": "Serine/threonine-protein kinase Sgk1", "gene_name": "SGK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15742-1", "protein_name": "NGFI-A-binding protein 2", "gene_name": "NAB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7LC44-1", "protein_name": "Activity-regulated cytoskeleton-associated protein", "gene_name": "ARC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17275-1", "protein_name": "Transcription factor JunB", "gene_name": "JUNB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18846-1", "protein_name": 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Does not affect ability to activate SGK1.", "evidence": [ { "database": "UniProtKB", "id": "Q9H4A3", "url": "https://www.uniprot.org/uniprotkb/Q9H4A3" }, { "database": "PubMed", "id": "16263722", "url": "https://pubmed.ncbi.nlm.nih.gov/16263722" }, { "database": "PubMed", "id": "36373794", "url": "https://pubmed.ncbi.nlm.nih.gov/36373794" } ], "uniprot_canonical_ac": "Q9H4A3-1" } ], "record_id": "pubmed.36373794", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"gene_name": "VGF", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02535-1", "protein_name": "DNA-binding protein inhibitor ID-3", "gene_name": "ID3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12980-1", "protein_name": "Protein lyl-1", "gene_name": "LYL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06889-1", "protein_name": "Early growth response protein 3", "gene_name": "EGR3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q05215-1", "protein_name": "Early growth response protein 4", "gene_name": "EGR4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08154-1", "protein_name": "Early growth response protein 1", "gene_name": "Egr1", "tax_name": "Rat" }, { "uniprot_canonical_ac": "P50570-1", "protein_name": "Dynamin-2", "gene_name": "DNM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09472-1", "protein_name": "Histone acetyltransferase p300", "gene_name": "EP300", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17535-1", "protein_name": 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"tax_name": "Human" }, { "uniprot_canonical_ac": "P17752-1", "protein_name": "Tryptophan 5-hydroxylase 1", "gene_name": "TPH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00535-1", "protein_name": "Cyclin-dependent kinase 5", "gene_name": "CDK5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19419-1", "protein_name": "ETS domain-containing protein Elk-1", "gene_name": "ELK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13506-1", "protein_name": "NGFI-A-binding protein 1", "gene_name": "NAB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RU8-1", "protein_name": "Tribbles homolog 1", "gene_name": "TRIB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02363-1", "protein_name": "DNA-binding protein inhibitor ID-2", "gene_name": "ID2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55042-1", "protein_name": "GTP-binding protein RAD", "gene_name": "RRAD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13127-1", "protein_name": "RE1-silencing 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "An isoform of the neuronal cyclin-dependent kinase 5 (Cdk5) activator.", "journal": "The Journal of biological chemistry", "date": "1995", "authors": "Tang D, Yeung J, Lee KY, Matsushita M, Matsui H, Tomizawa K, Hatase O, Wang JH", "reference": { "type": "PubMed", "id": "7592934", "url": "https://pubmed.ncbi.nlm.nih.gov/7592934" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O00141-1", "protein_name": "Serine/threonine-protein kinase Sgk1", "gene_name": "SGK1", "tax_name": 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"gene_name": "DNM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09472-1", "protein_name": "Histone acetyltransferase p300", "gene_name": "EP300", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17535-1", "protein_name": "Transcription factor JunD", "gene_name": "JUND", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15407-1", "protein_name": "Fos-related antigen 1", "gene_name": "FOSL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17752-1", "protein_name": "Tryptophan 5-hydroxylase 1", "gene_name": "TPH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00535-1", "protein_name": "Cyclin-dependent kinase 5", "gene_name": "CDK5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19419-1", "protein_name": "ETS domain-containing protein Elk-1", "gene_name": "ELK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13506-1", "protein_name": "NGFI-A-binding protein 1", "gene_name": "NAB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RU8-1", "protein_name": 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"gene_name": "ATF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18146-1", "protein_name": "Early growth response protein 1", "gene_name": "EGR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50553-1", "protein_name": "Achaete-scute homolog 1", "gene_name": "ASCL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13319-1", "protein_name": "Cyclin-dependent kinase 5 activator 2", "gene_name": "CDK5R2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53539-1", "protein_name": "Protein FosB", "gene_name": "FOSB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P47928-1", "protein_name": "DNA-binding protein inhibitor ID-4", "gene_name": "ID4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11831-1", "protein_name": "Serum response factor", "gene_name": "SRF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41134-1", "protein_name": "DNA-binding protein inhibitor ID-1", "gene_name": "ID1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q62722-1", "protein_name": "NGFI-A-binding protein 1", "gene_name": "Nab1", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q15078-1", "protein_name": "Cyclin-dependent kinase 5 activator 1", "gene_name": "CDK5R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99963-1", "protein_name": "Endophilin-A3", "gene_name": "SH3GL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99081-1", "protein_name": "Transcription factor 12", "gene_name": "TCF12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14839-1", "protein_name": "ATP-dependent chromatin remodeler CHD4", "gene_name": "CHD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14814-1", "protein_name": "Myocyte-specific enhancer factor 2D", "gene_name": "MEF2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15240-1", "protein_name": "Neurosecretory protein VGF", "gene_name": "VGF", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02535-1", "protein_name": "DNA-binding protein inhibitor ID-3", "gene_name": "ID3", "tax_name": 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"uniprot_canonical_ac": "P62714-1", "protein_name": "Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform", "gene_name": "PPP2CB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42771-1", "protein_name": "Cyclin-dependent kinase inhibitor 2A", "gene_name": "CDKN2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06493-1", "protein_name": "Cyclin-dependent kinase 1", "gene_name": "CDK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78396-1", "protein_name": "Cyclin-A1", "gene_name": "CCNA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6R327-1", "protein_name": "Rapamycin-insensitive companion of mTOR", "gene_name": "RICTOR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVC4-1", "protein_name": "Target of rapamycin complex subunit LST8", "gene_name": "MLST8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51959-1", "protein_name": "Cyclin-G1", "gene_name": "CCNG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42345-1", "protein_name": "Serine/threonine-protein kinase mTOR", "gene_name": "MTOR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVI0-1", "protein_name": "PHD finger protein 20", "gene_name": "PHF20", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24941-1", "protein_name": "Cyclin-dependent kinase 2", "gene_name": "CDK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15151-1", "protein_name": "Protein Mdm4", "gene_name": "MDM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00987-1", "protein_name": "E3 ubiquitin-protein ligase Mdm2", "gene_name": "MDM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30154-1", "protein_name": "Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform", "gene_name": "PPP2R1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O96017-1", "protein_name": "Serine/threonine-protein kinase Chk2", "gene_name": "CHEK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15530-1", "protein_name": "3-phosphoinositide-dependent protein kinase 1", "gene_name": "PDPK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30153-1", "protein_name": "Serine/threonine-protein phosphatase 2A 65 kDa 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the National Academy of Sciences of the United States of America", "date": "1995", "authors": "Link W, Konietzko U, Kauselmann G, Krug M, Schwanke B, Frey U, Kuhl D", "reference": { "type": "PubMed", "id": "7777577", "url": "https://pubmed.ncbi.nlm.nih.gov/7777577" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O00141-1", "protein_name": "Serine/threonine-protein kinase Sgk1", "gene_name": "SGK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15742-1", "protein_name": "NGFI-A-binding protein 2", "gene_name": "NAB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7LC44-1", "protein_name": "Activity-regulated cytoskeleton-associated protein", "gene_name": "ARC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17275-1", "protein_name": "Transcription factor JunB", "gene_name": "JUNB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18846-1", "protein_name": "Cyclic AMP-dependent transcription factor ATF-1", "gene_name": "ATF1", "tax_name": 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"tax_name": "Human" }, { "uniprot_canonical_ac": "P17752-1", "protein_name": "Tryptophan 5-hydroxylase 1", "gene_name": "TPH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00535-1", "protein_name": "Cyclin-dependent kinase 5", "gene_name": "CDK5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19419-1", "protein_name": "ETS domain-containing protein Elk-1", "gene_name": "ELK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13506-1", "protein_name": "NGFI-A-binding protein 1", "gene_name": "NAB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RU8-1", "protein_name": "Tribbles homolog 1", "gene_name": "TRIB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02363-1", "protein_name": "DNA-binding protein inhibitor ID-2", "gene_name": "ID2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55042-1", "protein_name": "GTP-binding protein RAD", "gene_name": "RRAD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13127-1", "protein_name": "RE1-silencing transcription factor", "gene_name": "REST", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11161-1", "protein_name": "E3 SUMO-protein ligase EGR2", "gene_name": "EGR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13726-1", "protein_name": "Tissue factor", "gene_name": "F3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01100-1", "protein_name": "Protein c-Fos", "gene_name": "FOS", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O00141", "url": "https://www.uniprot.org/uniprotkb/O00141" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.7777577", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 39 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of p53 target genes through immune selection of genomic DNA: the cyclin G gene contains two distinct p53 binding sites.", "journal": "Oncogene", "date": "1995", "authors": "Zauberman A, Lupo A, Oren M", "reference": { "type": "PubMed", "id": "7784084", "url": "https://pubmed.ncbi.nlm.nih.gov/7784084" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O00141-1", "protein_name": "Serine/threonine-protein kinase Sgk1", "gene_name": "SGK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UER7-1", "protein_name": "Death domain-associated protein 6", "gene_name": "DAXX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q969K3-1", "protein_name": "E3 ubiquitin-protein ligase RNF34", "gene_name": "RNF34", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20248-1", "protein_name": "Cyclin-A2", "gene_name": "CCNA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P39950-1", "protein_name": "Cyclin-G1", "gene_name": "Ccng1", "tax_name": "Rat" }, { "uniprot_canonical_ac": "P85299-1", "protein_name": "Proline-rich protein 5", "gene_name": "PRR5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BPZ7-1", "protein_name": "Target of rapamycin complex 2 subunit MAPKAP1", "gene_name": "MAPKAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WZ73-1", "protein_name": "E3 ubiquitin-protein ligase rififylin", "gene_name": "RFFL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93009-1", "protein_name": "Ubiquitin C-terminal hydrolase 7", "gene_name": "USP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62714-1", "protein_name": "Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform", "gene_name": "PPP2CB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42771-1", "protein_name": "Cyclin-dependent kinase inhibitor 2A", "gene_name": "CDKN2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06493-1", "protein_name": "Cyclin-dependent kinase 1", "gene_name": "CDK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78396-1", "protein_name": "Cyclin-A1", "gene_name": "CCNA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6R327-1", "protein_name": "Rapamycin-insensitive companion of mTOR", "gene_name": "RICTOR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVC4-1", "protein_name": "Target of rapamycin complex subunit LST8", "gene_name": 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"P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15151-1", "protein_name": "Protein Mdm4", "gene_name": "MDM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00987-1", "protein_name": "E3 ubiquitin-protein ligase Mdm2", "gene_name": "MDM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30154-1", "protein_name": "Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform", "gene_name": "PPP2R1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O96017-1", "protein_name": "Serine/threonine-protein kinase Chk2", "gene_name": "CHEK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15530-1", "protein_name": "3-phosphoinositide-dependent protein kinase 1", "gene_name": "PDPK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30153-1", "protein_name": "Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform", "gene_name": "PPP2R1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P67775-1", "protein_name": "Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform", "gene_name": "PPP2CA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75604-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 2", "gene_name": "USP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13362-1", "protein_name": "Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform", "gene_name": "PPP2R5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13315-1", "protein_name": "Serine-protein kinase ATM", "gene_name": "ATM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04637-1", "protein_name": "Cellular tumor antigen p53", "gene_name": "TP53", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O00141", "url": "https://www.uniprot.org/uniprotkb/O00141" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.7784084", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 37 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", 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"n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A ternary complex factor-dependent mechanism mediates induction of egr-1 through selective serum response elements following antigen receptor cross-linking in B lymphocytes.", "journal": "Molecular and cellular biology", "date": "1995", "authors": "McMahon SB, Monroe JG", "reference": { "type": "PubMed", "id": "7823924", "url": "https://pubmed.ncbi.nlm.nih.gov/7823924" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O00141-1", "protein_name": "Serine/threonine-protein kinase Sgk1", "gene_name": "SGK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15742-1", "protein_name": "NGFI-A-binding protein 2", "gene_name": "NAB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7LC44-1", "protein_name": "Activity-regulated cytoskeleton-associated protein", "gene_name": "ARC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17275-1", "protein_name": 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"tax_name": "Human" }, { "uniprot_canonical_ac": "P11831-1", "protein_name": "Serum response factor", "gene_name": "SRF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41134-1", "protein_name": "DNA-binding protein inhibitor ID-1", "gene_name": "ID1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15078-1", "protein_name": "Cyclin-dependent kinase 5 activator 1", "gene_name": "CDK5R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99963-1", "protein_name": "Endophilin-A3", "gene_name": "SH3GL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99081-1", "protein_name": "Transcription factor 12", "gene_name": "TCF12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14839-1", "protein_name": "ATP-dependent chromatin remodeler CHD4", "gene_name": "CHD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14814-1", "protein_name": "Myocyte-specific enhancer factor 2D", "gene_name": "MEF2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15240-1", "protein_name": 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"referenced_proteins": [ { "uniprot_canonical_ac": "O00141-1", "protein_name": "Serine/threonine-protein kinase Sgk1", "gene_name": "SGK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15742-1", "protein_name": "NGFI-A-binding protein 2", "gene_name": "NAB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7LC44-1", "protein_name": "Activity-regulated cytoskeleton-associated protein", "gene_name": "ARC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17275-1", "protein_name": "Transcription factor JunB", "gene_name": "JUNB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18846-1", "protein_name": "Cyclic AMP-dependent transcription factor ATF-1", "gene_name": "ATF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15336-1", "protein_name": "Cyclic AMP-dependent transcription factor ATF-2", "gene_name": "ATF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18146-1", "protein_name": "Early growth response protein 1", "gene_name": "EGR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50553-1", "protein_name": "Achaete-scute homolog 1", "gene_name": "ASCL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13319-1", "protein_name": "Cyclin-dependent kinase 5 activator 2", "gene_name": "CDK5R2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53539-1", "protein_name": "Protein FosB", "gene_name": "FOSB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P47928-1", "protein_name": "DNA-binding protein inhibitor ID-4", "gene_name": "ID4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11831-1", "protein_name": "Serum response factor", "gene_name": "SRF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41134-1", "protein_name": "DNA-binding protein inhibitor ID-1", "gene_name": "ID1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15078-1", "protein_name": "Cyclin-dependent kinase 5 activator 1", "gene_name": "CDK5R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99963-1", "protein_name": "Endophilin-A3", "gene_name": 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"Early growth response protein 4", "gene_name": "EGR4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q63053-1", "protein_name": "Activity-regulated cytoskeleton-associated protein", "gene_name": "Arc", "tax_name": "Rat" }, { "uniprot_canonical_ac": "P50570-1", "protein_name": "Dynamin-2", "gene_name": "DNM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09472-1", "protein_name": "Histone acetyltransferase p300", "gene_name": "EP300", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17535-1", "protein_name": "Transcription factor JunD", "gene_name": "JUND", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15407-1", "protein_name": "Fos-related antigen 1", "gene_name": "FOSL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17752-1", "protein_name": "Tryptophan 5-hydroxylase 1", "gene_name": "TPH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00535-1", "protein_name": "Cyclin-dependent kinase 5", "gene_name": "CDK5", "tax_name": "Human" }, { 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}, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20248-1", "protein_name": "Cyclin-A2", "gene_name": "CCNA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P85299-1", "protein_name": "Proline-rich protein 5", "gene_name": "PRR5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BPZ7-1", "protein_name": "Target of rapamycin complex 2 subunit MAPKAP1", "gene_name": "MAPKAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WZ73-1", "protein_name": "E3 ubiquitin-protein ligase rififylin", "gene_name": "RFFL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93009-1", "protein_name": "Ubiquitin C-terminal hydrolase 7", "gene_name": "USP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62714-1", "protein_name": "Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform", "gene_name": "PPP2CB", "tax_name": "Human" }, { 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"uniprot_canonical_ac": "O15151-1", "protein_name": "Protein Mdm4", "gene_name": "MDM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00987-1", "protein_name": "E3 ubiquitin-protein ligase Mdm2", "gene_name": "MDM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30154-1", "protein_name": "Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform", "gene_name": "PPP2R1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O96017-1", "protein_name": "Serine/threonine-protein kinase Chk2", "gene_name": "CHEK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15530-1", "protein_name": "3-phosphoinositide-dependent protein kinase 1", "gene_name": "PDPK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30153-1", "protein_name": "Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform", "gene_name": "PPP2R1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P67775-1", "protein_name": "Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform", "gene_name": "PPP2CA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75604-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 2", "gene_name": "USP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13362-1", "protein_name": "Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform", "gene_name": "PPP2R5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13315-1", "protein_name": "Serine-protein kinase ATM", "gene_name": "ATM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04637-1", "protein_name": "Cellular tumor antigen p53", "gene_name": "TP53", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O00141", "url": "https://www.uniprot.org/uniprotkb/O00141" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.7957050", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 37 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { 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[] } ] }, { "title": "The p53-mdm-2 autoregulatory feedback loop.", "journal": "Genes & development", "date": "1993", "authors": "Wu X, Bayle JH, Olson D, Levine AJ", "reference": { "type": "PubMed", "id": "8319905", "url": "https://pubmed.ncbi.nlm.nih.gov/8319905" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O00141-1", "protein_name": "Serine/threonine-protein kinase Sgk1", "gene_name": "SGK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UER7-1", "protein_name": "Death domain-associated protein 6", "gene_name": "DAXX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCK5-1", "protein_name": "Protein argonaute-4", "gene_name": "AGO4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC52-1", "protein_name": "Chromobox protein homolog 8", "gene_name": "CBX8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q969K3-1", "protein_name": "E3 ubiquitin-protein ligase RNF34", "gene_name": "RNF34", "tax_name": "Human" }, { 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"gene_name": "ASCL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13319-1", "protein_name": "Cyclin-dependent kinase 5 activator 2", "gene_name": "CDK5R2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53539-1", "protein_name": "Protein FosB", "gene_name": "FOSB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P47928-1", "protein_name": "DNA-binding protein inhibitor ID-4", "gene_name": "ID4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11831-1", "protein_name": "Serum response factor", "gene_name": "SRF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41134-1", "protein_name": "DNA-binding protein inhibitor ID-1", "gene_name": "ID1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15078-1", "protein_name": "Cyclin-dependent kinase 5 activator 1", "gene_name": "CDK5R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99963-1", "protein_name": "Endophilin-A3", "gene_name": "SH3GL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99081-1", 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"tax_name": "Human" }, { "uniprot_canonical_ac": "P62714-1", "protein_name": "Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform", "gene_name": "PPP2CB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42771-1", "protein_name": "Cyclin-dependent kinase inhibitor 2A", "gene_name": "CDKN2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06493-1", "protein_name": "Cyclin-dependent kinase 1", "gene_name": "CDK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78396-1", "protein_name": "Cyclin-A1", "gene_name": "CCNA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6R327-1", "protein_name": "Rapamycin-insensitive companion of mTOR", "gene_name": "RICTOR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVC4-1", "protein_name": "Target of rapamycin complex subunit LST8", "gene_name": "MLST8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51959-1", "protein_name": "Cyclin-G1", "gene_name": "CCNG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42345-1", "protein_name": "Serine/threonine-protein kinase mTOR", "gene_name": "MTOR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVI0-1", "protein_name": "PHD finger protein 20", "gene_name": "PHF20", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24941-1", "protein_name": "Cyclin-dependent kinase 2", "gene_name": "CDK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15151-1", "protein_name": "Protein Mdm4", "gene_name": "MDM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00987-1", "protein_name": "E3 ubiquitin-protein ligase Mdm2", "gene_name": "MDM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30154-1", "protein_name": "Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform", "gene_name": "PPP2R1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O96017-1", "protein_name": "Serine/threonine-protein kinase Chk2", "gene_name": "CHEK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15530-1", "protein_name": "3-phosphoinositide-dependent protein kinase 1", "gene_name": "PDPK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30153-1", "protein_name": "Serine/threonine-protein phosphatase 2A 65 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"https://www.uniprot.org/uniprotkb/O00141" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8479525", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 36 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], 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NGFIA through complex regulatory elements that are also sensitive to serum and phorbol 12-myristate 13-acetate.", "journal": "Molecular endocrinology (Baltimore, Md.)", "date": "1993", "authors": "DeFranco C, Damon DH, Endoh M, Wagner JA", "reference": { "type": "PubMed", "id": "8483478", "url": "https://pubmed.ncbi.nlm.nih.gov/8483478" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O00141-1", "protein_name": "Serine/threonine-protein kinase Sgk1", "gene_name": "SGK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15742-1", "protein_name": "NGFI-A-binding protein 2", "gene_name": "NAB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7LC44-1", "protein_name": "Activity-regulated cytoskeleton-associated protein", "gene_name": "ARC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17275-1", "protein_name": "Transcription factor JunB", "gene_name": "JUNB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18846-1", "protein_name": "Cyclic 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"uniprot_canonical_ac": "P17535-1", "protein_name": "Transcription factor JunD", "gene_name": "JUND", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15407-1", "protein_name": "Fos-related antigen 1", "gene_name": "FOSL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17752-1", "protein_name": "Tryptophan 5-hydroxylase 1", "gene_name": "TPH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00535-1", "protein_name": "Cyclin-dependent kinase 5", "gene_name": "CDK5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19419-1", "protein_name": "ETS domain-containing protein Elk-1", "gene_name": "ELK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13506-1", "protein_name": "NGFI-A-binding protein 1", "gene_name": "NAB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RU8-1", "protein_name": "Tribbles homolog 1", "gene_name": "TRIB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02363-1", "protein_name": "DNA-binding protein inhibitor ID-2", "gene_name": "ID2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55042-1", "protein_name": "GTP-binding protein RAD", "gene_name": "RRAD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13127-1", "protein_name": "RE1-silencing transcription factor", "gene_name": "REST", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11161-1", "protein_name": "E3 SUMO-protein ligase EGR2", "gene_name": "EGR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13726-1", "protein_name": "Tissue factor", "gene_name": "F3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01100-1", "protein_name": "Protein c-Fos", "gene_name": "FOS", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q61122-1", "protein_name": "NGFI-A-binding protein 1", "gene_name": "Nab1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q61127-1", "protein_name": "NGFI-A-binding protein 2", "gene_name": "Nab2", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O00141", "url": "https://www.uniprot.org/uniprotkb/O00141" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8668170", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 40 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 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is required for transcriptional induction of the vgf gene by nerve growth factor and Ras.", "journal": "Molecular and cellular biology", "date": "1996", "authors": "D'Arcangelo G, Habas R, Wang S, Halegoua S, Salton SR", "reference": { "type": "PubMed", "id": "8756618", "url": "https://pubmed.ncbi.nlm.nih.gov/8756618" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O00141-1", "protein_name": "Serine/threonine-protein kinase Sgk1", "gene_name": "SGK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15742-1", "protein_name": "NGFI-A-binding protein 2", "gene_name": "NAB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7LC44-1", "protein_name": "Activity-regulated cytoskeleton-associated protein", "gene_name": "ARC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17275-1", "protein_name": "Transcription factor JunB", "gene_name": "JUNB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18846-1", "protein_name": "Cyclic AMP-dependent 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"uniprot_canonical_ac": "P41134-1", "protein_name": "DNA-binding protein inhibitor ID-1", "gene_name": "ID1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15078-1", "protein_name": "Cyclin-dependent kinase 5 activator 1", "gene_name": "CDK5R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99963-1", "protein_name": "Endophilin-A3", "gene_name": "SH3GL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99081-1", "protein_name": "Transcription factor 12", "gene_name": "TCF12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14839-1", "protein_name": "ATP-dependent chromatin remodeler CHD4", "gene_name": "CHD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14814-1", "protein_name": "Myocyte-specific enhancer factor 2D", "gene_name": "MEF2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15240-1", "protein_name": "Neurosecretory protein VGF", "gene_name": "VGF", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02535-1", "protein_name": "DNA-binding protein 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "Structure and chromosomal assignment of the human cyclin G gene.", "journal": "Genomics", "date": "1996", "authors": "Endo Y, Fujita T, Tamura K, Tsuruga H, Nojima H", "reference": { "type": "PubMed", "id": "8954786", "url": "https://pubmed.ncbi.nlm.nih.gov/8954786" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O00141-1", "protein_name": "Serine/threonine-protein kinase Sgk1", "gene_name": "SGK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UER7-1", "protein_name": "Death domain-associated protein 6", "gene_name": "DAXX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q969K3-1", "protein_name": "E3 ubiquitin-protein ligase RNF34", "gene_name": "RNF34", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20248-1", "protein_name": "Cyclin-A2", 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"gene_name": "NRP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08575-3", "protein_name": "Receptor-type tyrosine-protein phosphatase C", "gene_name": "PTPRC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05556-1", "protein_name": "Integrin beta-1", "gene_name": "ITGB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14786-1", "protein_name": "Neuropilin-1", "gene_name": "NRP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75326-1", "protein_name": "Semaphorin-7A", "gene_name": "SEMA7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43914-1", "protein_name": "TYRO protein tyrosine kinase-binding protein", "gene_name": "TYROBP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H3S1-1", "protein_name": "Semaphorin-4A", "gene_name": "SEMA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15041-1", "protein_name": "Semaphorin-3E", "gene_name": "SEMA3E", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCM2-1", "protein_name": "Plexin-A4", "gene_name": "PLXNA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60486-1", "protein_name": "Plexin-C1", "gene_name": "PLXNC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75051-1", "protein_name": "Plexin-A2", "gene_name": "PLXNA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UIW2-1", "protein_name": "Plexin-A1", "gene_name": "PLXNA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56199-1", "protein_name": "Integrin alpha-1", "gene_name": "ITGA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZC2-1", "protein_name": "Triggering receptor expressed on myeloid cells 2", "gene_name": "TREM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43157-1", "protein_name": "Plexin-B1", "gene_name": "PLXNB1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9H2E6", "url": "https://www.uniprot.org/uniprotkb/Q9H2E6" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10520995", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 22 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { 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"field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Switch in the protein tyrosine phosphatase associated with human CD100 semaphorin at terminal B-cell differentiation stage.", "journal": "Blood", "date": "2000", "authors": "Billard C, Delaire S, Raffoux E, Bensussan A, Boumsell L", "reference": { "type": "PubMed", "id": "10648410", "url": "https://pubmed.ncbi.nlm.nih.gov/10648410" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9H2E6-1", "protein_name": "Semaphorin-6A", "gene_name": "SEMA6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFY4-1", "protein_name": "Semaphorin-6D", "gene_name": "SEMA6D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULL4-1", "protein_name": "Plexin-B3", "gene_name": "PLXNB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4D7-1", "protein_name": "Plexin-D1", "gene_name": "PLXND1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92854-1", "protein_name": "Semaphorin-4D", "gene_name": "SEMA4D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13591-1", "protein_name": "Semaphorin-5A", "gene_name": "SEMA5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21854-1", "protein_name": "B-cell differentiation antigen CD72", "gene_name": "CD72", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08575-3", "protein_name": "Receptor-type tyrosine-protein phosphatase C", "gene_name": "PTPRC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05556-1", "protein_name": "Integrin beta-1", "gene_name": "ITGB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75326-1", "protein_name": "Semaphorin-7A", "gene_name": "SEMA7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43914-1", "protein_name": "TYRO protein tyrosine kinase-binding protein", "gene_name": "TYROBP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H3S1-1", "protein_name": "Semaphorin-4A", "gene_name": "SEMA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15041-1", "protein_name": "Semaphorin-3E", "gene_name": "SEMA3E", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCM2-1", "protein_name": "Plexin-A4", "gene_name": "PLXNA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60486-1", "protein_name": "Plexin-C1", "gene_name": "PLXNC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75051-1", "protein_name": "Plexin-A2", "gene_name": "PLXNA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UIW2-1", "protein_name": "Plexin-A1", "gene_name": "PLXNA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56199-1", "protein_name": "Integrin alpha-1", "gene_name": "ITGA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZC2-1", "protein_name": "Triggering receptor expressed on myeloid cells 2", "gene_name": "TREM2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9H2E6", "url": "https://www.uniprot.org/uniprotkb/Q9H2E6" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10648410", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 19 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The orthologous human and murine semaphorin 6A-1 proteins (SEMA6A-1/Sema6A-1) bind to the enabled/vasodilator-stimulated phosphoprotein-like protein (EVL) via a novel carboxyl-terminal zyxin-like domain.", "journal": "J. Biol. Chem.", "date": "2000", "authors": "Klostermann A, Lutz B, Gertler F, Behl C", "reference": { "type": "PubMed", "id": "10993894", "url": "https://pubmed.ncbi.nlm.nih.gov/10993894" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9H2E6-1", "protein_name": "Semaphorin-6A", "gene_name": "SEMA6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O35464-1", "protein_name": "Semaphorin-6A", "gene_name": "Sema6a", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P70429-1", "protein_name": "Ena/VASP-like protein", "gene_name": "Evl", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9UI08-1", "protein_name": "Ena/VASP-like protein", "gene_name": "EVL", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9H2E6", "url": "https://www.uniprot.org/uniprotkb/Q9H2E6" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": 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"table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of CD72 as a lymphocyte receptor for the class IV semaphorin CD100: a novel mechanism for regulating B cell signaling.", "journal": "Immunity", "date": "2000", "authors": "Kumanogoh A, Watanabe C, Lee I, Wang X, Shi W, Araki H, Hirata H, Iwahori K, Uchida J, Yasui T, Matsumoto M, Yoshida K, Yakura H, Pan C, Parnes JR, Kikutani H", "reference": { "type": "PubMed", "id": "11114375", "url": "https://pubmed.ncbi.nlm.nih.gov/11114375" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9H2E6-1", "protein_name": "Semaphorin-6A", "gene_name": "SEMA6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFY4-1", "protein_name": "Semaphorin-6D", "gene_name": "SEMA6D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULL4-1", "protein_name": "Plexin-B3", "gene_name": "PLXNB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4D7-1", "protein_name": "Plexin-D1", "gene_name": "PLXND1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92854-1", "protein_name": "Semaphorin-4D", "gene_name": "SEMA4D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13591-1", "protein_name": "Semaphorin-5A", "gene_name": "SEMA5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21854-1", "protein_name": "B-cell differentiation antigen CD72", "gene_name": "CD72", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08575-3", "protein_name": "Receptor-type tyrosine-protein phosphatase C", "gene_name": "PTPRC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05556-1", "protein_name": "Integrin beta-1", "gene_name": "ITGB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75326-1", "protein_name": "Semaphorin-7A", "gene_name": "SEMA7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43914-1", "protein_name": "TYRO protein tyrosine kinase-binding protein", "gene_name": "TYROBP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H3S1-1", "protein_name": "Semaphorin-4A", "gene_name": "SEMA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15041-1", "protein_name": "Semaphorin-3E", "gene_name": "SEMA3E", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCM2-1", "protein_name": "Plexin-A4", "gene_name": "PLXNA4", "tax_name": "Human" }, { 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Semaphorin 3E and plexin-D1 control vascular pattern independently of neuropilins.", "journal": "Science (New York, N.Y.)", "date": "2005", "authors": "Gu C, Yoshida Y, Livet J, Reimert DV, Mann F, Merte J, Henderson CE, Jessell TM, Kolodkin AL, Ginty DD", "reference": { "type": "PubMed", "id": "15550623", "url": "https://pubmed.ncbi.nlm.nih.gov/15550623" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9H2E6-1", "protein_name": "Semaphorin-6A", "gene_name": "SEMA6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFY4-1", "protein_name": 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"database": "UniProtKB", "id": "Q9H2E6", "url": "https://www.uniprot.org/uniprotkb/Q9H2E6" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.16436660", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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