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Biol.", "date": "2001", "authors": "Phillips E., Thacker J., Meuth M., Ganesh A.", "reference": { "type": "PubMed", "id": "11382339", "url": "https://pubmed.ncbi.nlm.nih.gov/11382339" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9R152-1", "protein_name": "Poly [ADP-ribose] polymerase 1", "gene_name": "PARP1", "tax_name": "Chinese hamster" } ], "species": [ { "name": "Cricetulus griseus", "taxid": 10029, "evidence": [ { "database": "UniProtKB", "id": "Q9R152", "url": "https://www.uniprot.org/uniprotkb/Q9R152" } ], "common_name": "Chinese hamster", "glygen_name": "Hamster", "reference_species": "Cricetulus griseus [10029]" } ], "record_id": "pubmed.11382339", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" 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Virol.", "date": "2015", "authors": "Yuan Ji-Min, He Bai-Liang, Yang Lu-Yun, Guo Chang-Jun, Weng Shao-Ping, Li Shengwen Calvin, He Jian-Guo", "reference": { "type": "PubMed", "id": "25355883", "url": "https://pubmed.ncbi.nlm.nih.gov/25355883" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0ACD6B5Z1-1", "protein_name": "Ankyrin repeat and KH domain-containing protein 1 isoform X1", "gene_name": "ankhd1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M9QGU1-1", "protein_name": "Ankyrin-2b isoform X1", "gene_name": "ank2b", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0ACD6B5Z1", "url": "https://www.uniprot.org/uniprotkb/A0ACD6B5Z1" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.25355883", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], 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Mutat.", "date": "2020", "authors": "Duerinckx Sarah, Jacquemin Val\u00e9rie, Drunat S\u00e9verine, Vial Yoann, Passemard Sandrine, Perazzolo Camille, Massart Annick, Soblet Julie, Racap\u00e9 Judith, Desmyter Laurence, Badoer Cindy, Papadimitriou Sofia, Le Borgne Yann-A\u00ebl, Lefort Anne, Libert Fr\u00e9d\u00e9rick, De Maertelaer Viviane, Rooman Marianne, Costagliola Sabine, Verloes Alain, Lenaerts Tom, Pirson Isabelle, Abramowicz Marc", "reference": { "type": "PubMed", "id": "31696992", "url": "https://pubmed.ncbi.nlm.nih.gov/31696992" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0ACD6B7S6-1", "protein_name": "WD repeat-containing protein 62 isoform X1", "gene_name": "wdr62", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M2B8W4-1", "protein_name": "Abnormal spindle-like microcephaly-associated protein isoform X1", "gene_name": "aspm", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { 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Transl. Med.", "date": "2022", "authors": "Hao L, Ma J, Wu F, Ma X, Qian M, Sheng W, Yan T, Tang N, Jiang X, Zhang B, Xiao D, Qian Y, Zhang J, Jiang N, Zhou W, Chen W, Ma D, Huang G", "reference": { "type": "PubMed", "id": "35808830", "url": "https://pubmed.ncbi.nlm.nih.gov/35808830" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0ACD6B7S6-1", "protein_name": "WD repeat-containing protein 62 isoform X1", "gene_name": "wdr62", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "O43379-1", "protein_name": "WD repeat-containing protein 62", "gene_name": "WDR62", "tax_name": "Human" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0ACD6B7S6", "url": "https://www.uniprot.org/uniprotkb/A0ACD6B7S6" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.35808830", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Evolutionary dynamics of olfactory receptor genes in fishes and tetrapods.", "journal": "Proc. Natl. Acad. Sci. U.S.A.", "date": "2005", "authors": "Niimura Yoshihito, Nei Masatoshi", "reference": { "type": "PubMed", "id": "15824306", "url": "https://pubmed.ncbi.nlm.nih.gov/15824306" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0ACD6B7K1-1", "protein_name": "Olfactory receptor", "gene_name": "or63a2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9I8Z0-1", "protein_name": "Odorant receptor 111-8", "gene_name": "or42e2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9I8Z5-1", "protein_name": "Olfactory receptor", "gene_name": "or30bx1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9I8Z1-1", "protein_name": "Odorant receptor 111-9", "gene_name": "or42d2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9I8Z6-1", "protein_name": "Olfactory receptor", "gene_name": "or30bw1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M1NL35-1", "protein_name": "Odorant receptor 109-7", "gene_name": "or42a7", "tax_name": 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"tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRK2-1", "protein_name": "Odorant receptor 109-2", "gene_name": "or42a8", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRE9-1", "protein_name": "Olfactory receptor", "gene_name": "or63b1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PR85-1", "protein_name": "Odorant receptor 132-4", "gene_name": "or92a2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PR87-1", "protein_name": "Odorant receptor 132-2", "gene_name": "or92a4", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PR99-1", "protein_name": "Olfactory receptor", "gene_name": "or62a2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRA0-1", "protein_name": "Olfactory receptor", "gene_name": "or62b2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRA2-1", "protein_name": "Olfactory receptor", "gene_name": "or62b4", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRA3-1", "protein_name": "Odorant receptor 125-4", "gene_name": "or62b3", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRA4-1", "protein_name": "Odorant receptor 125-3", "gene_name": "or62b5", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRA5-1", "protein_name": "Olfactory receptor", "gene_name": "or62a1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRA6-1", "protein_name": "Olfactory receptor", "gene_name": "or62a3", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRA7-1", "protein_name": "Odorant receptor 123-1", "gene_name": "or61a1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRA8-1", "protein_name": "Olfactory receptor", "gene_name": "or61c2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRA9-1", "protein_name": "Odorant receptor 124-2", "gene_name": "or61c1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRB2-1", "protein_name": "Odorant receptor 131-1", "gene_name": "or91a1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRB9-1", "protein_name": "Odorant receptor 103-3", "gene_name": "or30bt5", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRC1-1", "protein_name": "Olfactory receptor", "gene_name": "or30bt3", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRD7-1", "protein_name": "Olfactory receptor", "gene_name": "or71as1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRD8-1", "protein_name": "Odorant receptor 118-3", "gene_name": "or71ar1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRD9-1", "protein_name": "Olfactory receptor", "gene_name": "or71as2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRE0-1", "protein_name": "Olfactory receptor", "gene_name": "or71at1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRE1-1", "protein_name": "Odorant receptor 116-2", "gene_name": "or71aq2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRE2-1", "protein_name": "Odorant receptor 116-1", "gene_name": "or71aq1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRE7-1", "protein_name": "Odorant receptor 135-1", "gene_name": "or90j1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRF0-1", "protein_name": "Odorant receptor 128-10", "gene_name": "or64d1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRF2-1", "protein_name": "Odorant receptor 126-5", "gene_name": "or62c1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRF3-1", "protein_name": "Odorant receptor 126-4", "gene_name": "or62c4", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRF4-1", "protein_name": "Odorant receptor 126-3", "gene_name": "or62c2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRF5-1", "protein_name": "Olfactory receptor", "gene_name": "or62c6", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRF6-1", "protein_name": "Odorant receptor 128-9", "gene_name": "or64g2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRF7-1", "protein_name": "Odorant receptor 128-8", "gene_name": "or64e1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRF9-1", "protein_name": "Odorant receptor 128-6", "gene_name": "or64f1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRG1-1", "protein_name": "Odorant receptor 128-4", "gene_name": "or64b1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRG2-1", "protein_name": "Odorant receptor 128-3", "gene_name": "or64b4", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRG3-1", "protein_name": "Odorant receptor 128-2", "gene_name": "or64b3", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRG6-1", "protein_name": "Olfactory receptor", "gene_name": "or64a1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRH3-1", "protein_name": "Odorant receptor 137-2", "gene_name": "or90b1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRH4-1", "protein_name": "Odorant receptor 137-1", "gene_name": "or90d3", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRJ4-1", "protein_name": "Odorant receptor 109-6", "gene_name": "or109-6", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRK1-1", "protein_name": "Odorant receptor 109-3", "gene_name": "or42a5", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRK3-1", "protein_name": "Odorant receptor 109-1", "gene_name": "or42a1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRK4-1", "protein_name": "Odorant receptor 110-2", "gene_name": "or42b1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRK5-1", "protein_name": "Odorant receptor 110-1", "gene_name": "or42b2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRK6-1", "protein_name": "Odorant receptor 106-11", "gene_name": "or80a6", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRK7-1", "protein_name": "Odorant receptor 106-10", "gene_name": "or80a10", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRK8-1", "protein_name": "Odorant receptor 106-9", "gene_name": "or80a11", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRL0-1", "protein_name": "Odorant receptor 106-7", "gene_name": "or80a7", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRL1-1", "protein_name": "Odorant receptor 106-6", "gene_name": "or80a3", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRL2-1", "protein_name": "Odorant receptor 106-5", "gene_name": "or80a9", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRL3-1", "protein_name": "Odorant receptor 106-4", "gene_name": "or80a4", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRL4-1", "protein_name": "Odorant receptor 106-3", "gene_name": "or80a8", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRL5-1", "protein_name": "Odorant receptor 106-2", "gene_name": "or80a1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRL9-1", "protein_name": "Olfactory receptor", "gene_name": "or30bu1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRM1-1", "protein_name": "Olfactory receptor", "gene_name": "or61b1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRM3-1", "protein_name": "Olfactory receptor", "gene_name": "or41a1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2PRM5-1", "protein_name": "Odorant receptor 106-12", "gene_name": "or80a2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AC58HBV7-1", "protein_name": "Odorant receptor 111-3 isoform X1", "gene_name": "or42d1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9PRJ2-1", "protein_name": "Olfactory receptor", "gene_name": "or30bt1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1QTF7-1", "protein_name": "Odorant receptor 132-1 isoform X1", "gene_name": "or92a1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M2BH28-1", "protein_name": "Odorant receptor, family 42, subfamily A, member 4 isoform X1", "gene_name": "or42a4", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0ACD6B7K1", "url": "https://www.uniprot.org/uniprotkb/A0ACD6B7K1" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.15824306", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 73 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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dorsal migration of lateral cells during zebrafish gastrulation.", "journal": "Development", "date": "2004", "authors": "Bakkers Jeroen, Kramer Carina, Pothof Joris, Quaedvlieg Nicolette E M, Spaink Herman P, Hammerschmidt Matthias", "reference": { "type": "PubMed", "id": "14729574", "url": "https://pubmed.ncbi.nlm.nih.gov/14729574" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0ACD6B728-1", "protein_name": "Hyaluronan synthase 1 isoform X1", "gene_name": "has1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M3AJI3-1", "protein_name": "Hyaluronan synthase 3 isoform X1", "gene_name": "has3", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0ACD6B728", "url": "https://www.uniprot.org/uniprotkb/A0ACD6B728" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.14729574", "abstract": "", 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Open", "date": "2022", "authors": "Yoon Baul, Yeung Pan, Santistevan Nicholas, Bluhm Lauren E, Kawasaki Kenta, Kueper Janina, Dubielzig Richard, VanOudenhove Jennifer, Cotney Justin, Liao Eric C, Grinblat Yevgenya", "reference": { "type": "PubMed", "id": "35142342", "url": "https://pubmed.ncbi.nlm.nih.gov/35142342" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0ACD6B6R5-1", "protein_name": "Plasma protease C1 inhibitor isoform X1", "gene_name": "serping1", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0ACD6B6R5", "url": "https://www.uniprot.org/uniprotkb/A0ACD6B6R5" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.35142342", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Spatial expression and functional flexibility of monocarboxylate transporter isoforms in the zebrafish brain.", "journal": "Comp. 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Disord.", "date": "2015", "authors": "Guna Alina, Butcher Nancy J, Bassett Anne S", "reference": { "type": "PubMed", "id": "26137170", "url": "https://pubmed.ncbi.nlm.nih.gov/26137170" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0ACD6B559-1", "protein_name": "Heparin cofactor 2 isoform X1; Heparin cofactor 2 precursor", "gene_name": "serpind1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M2BC75-1", "protein_name": "Apoptosis-inducing factor 3 isoform X1", "gene_name": "aifm3", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M3B2J5-1", "protein_name": "ARVCF delta catenin family member b isoform X1", "gene_name": "arvcfb", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M1NZG6-1", "protein_name": "Synaptosomal-associated protein 29", "gene_name": "snap29", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M1NBN9-1", "protein_name": "Leucine-zipper-like transcriptional regulator 1", "gene_name": "lztr1", 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Biol.", "date": "2007", "authors": "Zecchin E, Filippi A, Biemar F, Tiso N, Pauls S, Ellertsdottir E, Gn\u00fcgge L, Bortolussi M, Driever W, Argenton F", "reference": { "type": "PubMed", "id": "17059815", "url": "https://pubmed.ncbi.nlm.nih.gov/17059815" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0AC58JSS5-1", "protein_name": "Solute carrier family 15 member 1", "gene_name": "slc15a1b", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0AC58JSS5", "url": "https://www.uniprot.org/uniprotkb/A0AC58JSS5" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.17059815", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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Cell. Endocrinol.", "date": "2016", "authors": "Houbrechts Anne M, Vergauwen Lucia, Bagci Enise, Van Houcke Jolien, Heijlen Marjolein, Kulemeka Bernard, Hyde David R, Knapen Dries, Darras Veerle M", "reference": { "type": "PubMed", "id": "26802877", "url": "https://pubmed.ncbi.nlm.nih.gov/26802877" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0AC58JSV2-1", "protein_name": "Rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma", "gene_name": "pde6ha.1", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0AC58JSV2", "url": "https://www.uniprot.org/uniprotkb/A0AC58JSV2" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.26802877", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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Cancer", "date": "2021", "authors": "Tu Xiang, Wang He Bin, Huang Qun, Cai Yi, Deng Yuan Ping, Yong Zhe, Hu Quan, Feng Jian, Jordan James B, Zhong Sen", "reference": { "type": "PubMed", "id": "33391408", "url": "https://pubmed.ncbi.nlm.nih.gov/33391408" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0AA52Z1E4-1", "protein_name": "Proteasome activator complex subunit 4B isoform X1", "gene_name": "psme4b", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0AA52Z1E4", "url": "https://www.uniprot.org/uniprotkb/A0AA52Z1E4" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.33391408", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], 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"date": "2004-02", "authors": "Deflorian Gianluca, Tiso Natascia, Ferretti Elisabetta, Meyer Dirk, Blasi Francesco, Bortolussi Marino, Argenton Francesco", "reference": { "type": "PubMed", "id": "14711874", "url": "https://pubmed.ncbi.nlm.nih.gov/14711874" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A8M3B5L4-1", "protein_name": "Homeobox protein PKNOX1.1 isoform X1", "gene_name": "pknox1.1", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0A8M3B5L4", "url": "https://www.uniprot.org/uniprotkb/A0A8M3B5L4" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.14711874", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], 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Part D, Genomics & proteomics", "date": "2023-06", "authors": "Wu Wenpeng, Ren Tianying, Cao Xiaojuan, Gao Jian", "reference": { "type": "PubMed", "id": "37080058", "url": "https://pubmed.ncbi.nlm.nih.gov/37080058" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0AA52Z2T5-1", "protein_name": "Elongation of very long chain fatty acids protein 5", "gene_name": "elovl5", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0AA52Z2T5", "url": "https://www.uniprot.org/uniprotkb/A0AA52Z2T5" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.37080058", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structural Analysis and Spatiotemporal Expression of Atxn1 Genes in Zebrafish Embryos and Larvae.", "journal": "International journal of molecular sciences", "date": "2021-10-21", "authors": "Vauti Franz, V\u00f6gele Viktoria, Deppe Isabel, Hahnenstein Susanne T, K\u00f6ster Reinhard W", "reference": { "type": "PubMed", "id": "34768779", "url": "https://pubmed.ncbi.nlm.nih.gov/34768779" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0AA52Z3H5-1", "protein_name": "Ataxin-1a isoform X1", "gene_name": "atxn1a", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q1LYM3-1", "protein_name": "Protein spire homolog 1", "gene_name": "spire1a; spire1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1Q4W3-1", "protein_name": "Derlin", "gene_name": "derl1", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0AA52Z3H5", "url": "https://www.uniprot.org/uniprotkb/A0AA52Z3H5" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.34768779", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Loss of Panx1 function in zebrafish alters motor behavior in a lab-on-chip model of Parkinson's disease.", "journal": "J. Neurosci. Res.", "date": "2023", "authors": "Khalili Arezoo, Safarian Nickie, van Wijngaarden Ellen, Zoidl Georg S, Zoidl Georg R, Rezai Pouya", "reference": { "type": "PubMed", "id": "37688406", "url": "https://pubmed.ncbi.nlm.nih.gov/37688406" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0AA54CTR8-1", "protein_name": "Synphilin-1", "gene_name": "sncaip", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AB32TF89-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "lrrk2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AB13ABF7-1", "protein_name": "E3 ubiquitin-protein ligase parkin", "gene_name": "prkn", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M1P3E9-1", "protein_name": "Synaptic vesicular amine transporter", "gene_name": "slc18a2", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0AA54CTR8", "url": "https://www.uniprot.org/uniprotkb/A0AA54CTR8" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.37688406", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Tetraspanin18 regulates angiogenesis through VEGFR2 and Notch pathways.", "journal": "Biol. Open", "date": "2021", "authors": "Li Grace X, Zhang Shaobing, Liu Ren, Singh Bani, Singh Sukhmani, Quinn David I, Crump Gage, Gill Parkash S", "reference": { "type": "PubMed", "id": "32694189", "url": "https://pubmed.ncbi.nlm.nih.gov/32694189" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0AB32TSH7-1", "protein_name": "Tetraspanin-18a isoform X1", "gene_name": "tspan18a", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M2B5N2-1", "protein_name": "Tetraspanin-18B", "gene_name": "tspan18b", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0AB32TSH7", "url": "https://www.uniprot.org/uniprotkb/A0AB32TSH7" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.32694189", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Nkcc1 (Slc12a2) is required for the regulation of endolymph volume in the otic vesicle and swim bladder volume in the zebrafish larva.", "journal": "Development", "date": "2009", "authors": "Abbas Leila, Whitfield Tanya T", "reference": { "type": "PubMed", "id": "19633174", "url": "https://pubmed.ncbi.nlm.nih.gov/19633174" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0AC58FZ01-1", "protein_name": "Potassium voltage-gated channel subfamily KQT member 1", "gene_name": "kcnq1.1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0G2KTI4-1", "protein_name": "Solute carrier family 12 member 2", "gene_name": "slc12a2", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0AC58FZ01", "url": "https://www.uniprot.org/uniprotkb/A0AC58FZ01" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "mutagenesis": [ { "start_pos": 972, "end_pos": 1136, "sequence_org": "KWKDCKIRVFIGGKINRIDHDRRAMATLLSKFRIDFSDITVLGDINTKPKSEGLTEFAEMIEPYKLREDDMEQEAAEKLKSEEPWRITDNELELYKAKGNRQIRLNELLKEHSSTANLIVMSMPLARKGAVSSALYMAWLDTLSKDLPPILLVRGNHQSVLTFYS", "sequence_mut": "", "comment": "In tg414b; Lethality between 6 and 14 days post-fertilization. Early ear development appears normal. The developing otic vesicle begins to collapse at 72 hours post-fertilization, probably due loss of endolymphatic fluid, and is significantly reduced in size by 5 days post-fertilization. Hair cells appear normal and there is no evidence of reduced cell numbers or apoptosis.", "evidence": [ { "database": "UniProtKB", "id": "A0A0G2KTI4", "url": "https://www.uniprot.org/uniprotkb/A0A0G2KTI4" }, { "database": "PubMed", "id": "19633174", "url": "https://pubmed.ncbi.nlm.nih.gov/19633174" } ], "uniprot_canonical_ac": "A0A0G2KTI4-1" } ], "record_id": "pubmed.19633174", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { 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"reference": { "type": "PubMed", "id": "21931561", "url": "https://pubmed.ncbi.nlm.nih.gov/21931561" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0AC58FZ01-1", "protein_name": "Potassium voltage-gated channel subfamily KQT member 1", "gene_name": "kcnq1.1", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0AC58FZ01", "url": "https://www.uniprot.org/uniprotkb/A0AC58FZ01" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.21931561", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": 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Mol. Cell. 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J. Mol. Sci.", "date": "2023", "authors": "De la Cruz Alicia, Wu Xiaoan, Rainer Quinn C, Hiniesto-I\u00f1igo Irene, Perez Marta E, Edler Isak, Liin Sara I, Larsson H Peter", "reference": { "type": "PubMed", "id": "37569465", "url": "https://pubmed.ncbi.nlm.nih.gov/37569465" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0AC58FZ01-1", "protein_name": "Potassium voltage-gated channel subfamily KQT member 1", "gene_name": "kcnq1.1", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0AC58FZ01", "url": "https://www.uniprot.org/uniprotkb/A0AC58FZ01" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.37569465", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", 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