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"authors": "Du Lei, Lu Yinfei, Wang Jingyi, Zheng Yijia, Li Huan, Liu Yunfei, Wu Xiaoling, Zhou Jieling, Wang Lei, He Linlin, Shi Jiasen, Xu Liu, Li Xizhi, Lu Qian, Yin Xiaoxing", "reference": { "type": "PubMed", "id": "38869718", "url": "https://pubmed.ncbi.nlm.nih.gov/38869718" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P54821-1", "protein_name": "Paired mesoderm homeobox protein 1", "gene_name": "PRRX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92845-1", "protein_name": "Kinesin-associated protein 3", "gene_name": "KIFAP3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P54821", "url": "https://www.uniprot.org/uniprotkb/P54821" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.38869718", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], 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"date": "2021", "authors": "Lin HW, Lee JY, Chou NL, Shih TW, Chang MS", "reference": { "type": "PubMed", "id": "34407138", "url": "https://pubmed.ncbi.nlm.nih.gov/34407138" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q15397-1", "protein_name": "Pumilio homolog 3", "gene_name": "PUM3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q15397", "url": "https://www.uniprot.org/uniprotkb/Q15397" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 259, "end_pos": 259, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q15397", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q15397" }, { "database": "PubMed", "id": "34407138", "url": "https://pubmed.ncbi.nlm.nih.gov/34407138" } ], "site_lbl": 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Genet.", "date": "2010", "authors": "Corbett MA, Bahlo M, Jolly L, Afawi Z, Gardner AE, Oliver KL, Tan S, Coffey A, Mulley JC, Dibbens LM, Simri W, Shalata A, Kivity S, Jackson GD, Berkovic SF, Gecz J", "reference": { "type": "PubMed", "id": "20797691", "url": "https://pubmed.ncbi.nlm.nih.gov/20797691" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q7RTY9-1", "protein_name": "Serine protease 41", "gene_name": "PRSS41", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULP9-1", "protein_name": "TBC1 domain family member 24", "gene_name": "TBC1D24", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96S19-1", "protein_name": "Methyltransferase-like 26", "gene_name": "METTL26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3UUG6-1", "protein_name": "TBC1 domain family member 24", "gene_name": "Tbc1d24", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q7RTY9", "url": "https://www.uniprot.org/uniprotkb/Q7RTY9" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.20797691", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "MONaKA, a novel modulator of the plasma membrane Na,K-ATPase.", "journal": "J. 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James JA, Merrill JT, Gilkeson GS, Seldin MF, Yin H, Baechler EC, Li QZ, Wakeland EK, Bruner GR, Kaufman KM, Kelly JA", "reference": { "type": "PubMed", "id": "18204446", "url": "https://pubmed.ncbi.nlm.nih.gov/18204446" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q7Z7A4-1", "protein_name": "PX domain-containing protein kinase-like protein", "gene_name": "PXK", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11215-1", "protein_name": "Integrin alpha-M", "gene_name": "ITGAM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P1Y6-1", "protein_name": "PHD and RING finger domain-containing protein 1", "gene_name": "PHRF1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q7Z7A4", "url": "https://www.uniprot.org/uniprotkb/Q7Z7A4" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.18204446", "abstract": 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N, Lau CS, Mok CC, Chan TM, Wong RW, Lee KW, Mok MY, Wong SN, Avihingsanon Y, Lee TL, Ho MH, Lee PP, Wong WH, Lau YL", "reference": { "type": "PubMed", "id": "19225526", "url": "https://pubmed.ncbi.nlm.nih.gov/19225526" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q7Z7A4-1", "protein_name": "PX domain-containing protein kinase-like protein", "gene_name": "PXK", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q7Z7A4", "url": "https://www.uniprot.org/uniprotkb/Q7Z7A4" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.19225526", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", 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"field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structure-function analysis of peroxidasin provides insight into the mechanism of collagen IV crosslinking.", "journal": "Free radical biology & medicine", "date": 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Loss of protein homooligomerization; when associated with S-1315 and S-1319.", "evidence": [ { "database": "UniProtKB", "id": "Q92626", "url": "https://www.uniprot.org/uniprotkb/Q92626" }, { "database": "PubMed", "id": "25708780", "url": "https://pubmed.ncbi.nlm.nih.gov/25708780" } ], "uniprot_canonical_ac": "Q92626-1" }, { "start_pos": 1319, "end_pos": 1319, "sequence_org": "C", "sequence_mut": "S", "comment": "Does not affect protein homooligomerization. Loss of protein homooligomerization; when associated with S-1315 and S-1316.", "evidence": [ { "database": "UniProtKB", "id": "Q92626", "url": "https://www.uniprot.org/uniprotkb/Q92626" }, { "database": "PubMed", "id": "25708780", "url": "https://pubmed.ncbi.nlm.nih.gov/25708780" } ], "uniprot_canonical_ac": "Q92626-1" }, { "start_pos": 736, "end_pos": 736, "sequence_org": "C", "sequence_mut": "S", "comment": "Loss of protein homooligomerization. Loss of protein homooligomerization; when associated with S-1315. 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Loss of collagen IV cross-link; when associated with E-826.", "evidence": [ { "database": "UniProtKB", "id": "Q92626", "url": "https://www.uniprot.org/uniprotkb/Q92626" }, { "database": "PubMed", "id": "25708780", "url": "https://pubmed.ncbi.nlm.nih.gov/25708780" }, { "database": "PubMed", "id": "34679700", "url": "https://pubmed.ncbi.nlm.nih.gov/34679700" } ], "uniprot_canonical_ac": "Q92626-1" }, { "start_pos": 826, "end_pos": 826, "sequence_org": "D", "sequence_mut": "E", "comment": "Loss of peroxidase activity. Does not affect oligomerization. Loss of peroxidase activity; when associated with E-823. Does not support the formation of collagen IV cross-links; when associated with W-823. Reduces the proteolytic processing; when associated with W-823. 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within a 111kb segment telomeric to the HLA-C gene.", "journal": "Hum. Mol. Genet.", "date": "1999", "authors": "Oka A, Tamiya G, Tomizawa M, Ota M, Katsuyama Y, Makino S, Shiina T, Yoshitome M, Iizuka M, Sasao Y, Iwashita K, Kawakubo Y, Sugai J, Ozawa A, Ohkido M, Kimura M, Bahram S, Inoko H", "reference": { "type": "PubMed", "id": "10545595", "url": "https://pubmed.ncbi.nlm.nih.gov/10545595" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UIG4-1", "protein_name": "Psoriasis susceptibility 1 candidate gene 2 protein", "gene_name": "PSORS1C2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6UXA7-1", "protein_name": "Uncharacterized protein C6orf15", "gene_name": "C6orf15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UIG5-1", "protein_name": "Psoriasis susceptibility 1 candidate gene 1 protein", "gene_name": "PSORS1C1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TD31-1", "protein_name": "Coiled-coil alpha-helical rod protein 1", "gene_name": "CCHCR1", "tax_name": "Human" } ], "species": [ { "name": "Homo 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[] } ] }, { "title": "SPR1 gene near HLA-C is unlikely to be a psoriasis susceptibility gene.", "journal": "Experimental dermatology", "date": "2003", "authors": "Chang YT, Tsai SF, Lin MW, Liu HN, Lee DD, Shiao YM, Chin PJ, Wang WJ", "reference": { "type": "PubMed", "id": "12823445", "url": "https://pubmed.ncbi.nlm.nih.gov/12823445" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UIG4-1", "protein_name": "Psoriasis susceptibility 1 candidate gene 2 protein", "gene_name": "PSORS1C2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UIG4", "url": "https://www.uniprot.org/uniprotkb/Q9UIG4" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12823445", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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Dermatol.", "date": "2003", "authors": "Holm SJ, Carlen LM, Mallbris L, Stahle-Backdahl M, O'Brien KP", "reference": { "type": "PubMed", "id": "12930300", "url": "https://pubmed.ncbi.nlm.nih.gov/12930300" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UIG4-1", "protein_name": "Psoriasis susceptibility 1 candidate gene 2 protein", "gene_name": "PSORS1C2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q80ZC9-1", "protein_name": "Psoriasis susceptibility 1 candidate gene 2 protein homolog", "gene_name": "Psors1c2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9UIG5-1", "protein_name": "Psoriasis susceptibility 1 candidate gene 1 protein", "gene_name": "PSORS1C1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UIG4", "url": "https://www.uniprot.org/uniprotkb/Q9UIG4" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } 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"Szczerkowska-Dobosz A, Rebala K, Szczerkowska Z, Witkowska-Tobola A", "reference": { "type": "PubMed", "id": "15523160", "url": "https://pubmed.ncbi.nlm.nih.gov/15523160" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UIG4-1", "protein_name": "Psoriasis susceptibility 1 candidate gene 2 protein", "gene_name": "PSORS1C2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UIG4", "url": "https://www.uniprot.org/uniprotkb/Q9UIG4" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15523160", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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