[ { "title": "cDNA sequence, genomic organization and differential expression of three Arabidopsis genes for germin/oxalate oxidase-like proteins.", "journal": "Plant Mol. Biol.", "date": "1997", "authors": "Membr\u00e9 N, Berna A, Neutelings G, David A, David H, Staiger D, S\u00e1ez V\u00e1squez J, Raynal M, Delseny M, Bernier F", "reference": { "type": "PubMed", "id": "9349269", "url": "https://pubmed.ncbi.nlm.nih.gov/9349269" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P92996-1", "protein_name": "Germin-like protein subfamily 1 member 20", "gene_name": "GER2; GLP5A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P94040-1", "protein_name": "Germin-like protein subfamily 3 member 1", "gene_name": "GLP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P94072-1", "protein_name": "Germin-like protein subfamily 3 member 3", "gene_name": "GER3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P92996", "url": "https://www.uniprot.org/uniprotkb/P92996" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.9349269", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Two families of acyl-CoA thioesterases in Arabidopsis.", "journal": "Biochem. Soc. Trans.", "date": "2000", "authors": "Tilton G, Shockey J, Browse J", "reference": { "type": "PubMed", "id": "11171266", "url": "https://pubmed.ncbi.nlm.nih.gov/11171266" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q5FYU1-1", "protein_name": "Acyl-CoA hydrolase 1", "gene_name": "CNTE1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4HU51-1", "protein_name": "Acyl-CoA hydrolase 2", "gene_name": "ACH2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q5FYU1", "url": "https://www.uniprot.org/uniprotkb/Q5FYU1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11171266", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Characterization of the nuclear gene encoding chloroplast ribosomal protein S13 from Arabidopsis thaliana.", "journal": "Curr. Genet.", "date": "1995", "authors": "Kumar R, Drouaud J, Raynal M, Small I", "reference": { "type": "PubMed", "id": "8590480", "url": "https://pubmed.ncbi.nlm.nih.gov/8590480" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P42732-1", "protein_name": "Small ribosomal subunit protein uS13c", "gene_name": "EMB3137; RPS13", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P42732", "url": "https://www.uniprot.org/uniprotkb/P42732" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.8590480", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", 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and RMI1 suppress somatic crossovers and are essential for resolution of meiotic recombination intermediates in Arabidopsis thaliana.", "journal": "PLoS genetics", "date": "2008-12", "authors": "Hartung Frank, Suer Stefanie, Knoll Alexander, Wurz-Wildersinn Rebecca, Puchta Holger", "reference": { "type": "PubMed", "id": "19096507", "url": "https://pubmed.ncbi.nlm.nih.gov/19096507" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q5XUX6-1", "protein_name": "RecQ-mediated genome instability protein 1", "gene_name": "RMI1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L840-1", "protein_name": "ATP-dependent DNA helicase Q-like 4A", "gene_name": "RECQL4A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LVP1-1", "protein_name": "DNA topoisomerase 3-alpha", "gene_name": "TOP3A", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": 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for the domains of the Arabidopsis thaliana RMI1 protein in DNA cross-link repair, somatic and meiotic recombination.", "journal": "Nucleic acids research", "date": "2013-11", "authors": "Bonnet Simone, Knoll Alexander, Hartung Frank, Puchta Holger", "reference": { "type": "PubMed", "id": "23956219", "url": "https://pubmed.ncbi.nlm.nih.gov/23956219" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q5XUX6-1", "protein_name": "RecQ-mediated genome instability protein 1", "gene_name": "RMI1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q5XUX6", "url": "https://www.uniprot.org/uniprotkb/Q5XUX6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.23956219", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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Plant Res.", "date": "2003", "authors": "Schm\u00fclling Thomas, Werner Tom\u00e1s, Riefler Michael, Krupkov\u00e1 Eva, Bartrina y Manns Isabel", "reference": { "type": "PubMed", "id": "12721786", "url": "https://pubmed.ncbi.nlm.nih.gov/12721786" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q67YU0-1", "protein_name": "Cytokinin dehydrogenase 5", "gene_name": "CKX5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LY71-1", "protein_name": "Cytokinin dehydrogenase 6", "gene_name": "CKX6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FUJ1-1", "protein_name": "Cytokinin dehydrogenase 7", "gene_name": "CKX7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FUJ2-1", "protein_name": "Cytokinin dehydrogenase 4", "gene_name": "CKX4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FUJ3-1", "protein_name": "Cytokinin dehydrogenase 2", "gene_name": "CKX2", "tax_name": "Mouse-ear cress" }, { 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3", "gene_name": "GASA3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80641-1", "protein_name": "Gibberellin-regulated protein 8", "gene_name": "F12L6.20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LFR3-1", "protein_name": "Gibberellin-regulated protein 14", "gene_name": "GASA14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P46690-1", "protein_name": "Gibberellin-regulated protein 4", "gene_name": "GASA4", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P46689", "url": "https://www.uniprot.org/uniprotkb/P46689" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.17284469", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "GASA, a gibberellin-regulated gene family from Arabidopsis thaliana related to the tomato GAST1 gene.", "journal": "Plant Mol. Biol.", "date": "1995", "authors": "Herzog M, Dorne A M, Grellet F", "reference": { "type": "PubMed", "id": "7727751", "url": "https://pubmed.ncbi.nlm.nih.gov/7727751" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P46689-1", "protein_name": "Gibberellin-regulated protein 1", "gene_name": "GASA1; MUS", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P46687-1", "protein_name": "Gibberellin-regulated protein 3", "gene_name": "GASA3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P46688-1", "protein_name": "Gibberellin-regulated protein 2", "gene_name": "GASA2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P46690-1", "protein_name": "Gibberellin-regulated protein 4", "gene_name": "GASA4", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P46689", "url": "https://www.uniprot.org/uniprotkb/P46689" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.7727751", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "In planta changes in protein phosphorylation induced by the plant hormone abscisic acid.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2010-09-07", "authors": "Kline Kelli G, Barrett-Wilt Gregory A, Sussman Michael R", "reference": { "type": "PubMed", "id": "20733066", "url": "https://pubmed.ncbi.nlm.nih.gov/20733066" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P48347-1", "protein_name": "14-3-3-like protein GF14 epsilon", "gene_name": "GRF10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M7Q5-1", "protein_name": "ABSCISIC ACID-INSENSITIVE 5-like protein 4", "gene_name": "ABF1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LS51-1", "protein_name": "CRS1 / YhbY (CRM) domain-containing protein", "gene_name": "EMB1865", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LVC5-1", "protein_name": "glucose-6-phosphate 1-epimerase", "gene_name": "MJB24.14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q940H6-1", "protein_name": 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"uniprot_canonical_ac": "O80986-1", "protein_name": "Bromodomain protein (DUF761)", "gene_name": "T19L18.8; T19L18_8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93VM8-1", "protein_name": "Copper transporter 5", "gene_name": "COPT5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CAW4-1", "protein_name": "Transport protein particle (TRAPP) component", "gene_name": "TRAPPC6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FV50-1", "protein_name": "Methionine aminopeptidase 1D, chloroplastic/mitochondrial", "gene_name": "MAP1D", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J9A0-1", "protein_name": "Nodulin/glutamine synthase-like protein", "gene_name": "NODGS", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S8L9-1", "protein_name": "Uncharacterized TPR repeat-containing protein At2g32450", "gene_name": "T32F6.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4ISU2-1", "protein_name": "Early endosome antigen", "gene_name": "PICC", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q76E23-1", "protein_name": "Eukaryotic translation initiation factor 4G", "gene_name": "EIF4G", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RWH3-1", "protein_name": "Dual specificity protein kinase YAK1 homolog", "gene_name": "YAK1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZU2-1", "protein_name": "Syntaxin-132", "gene_name": "SYP132", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O65570-1", "protein_name": "Villin-4", "gene_name": "VLN4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80452-1", "protein_name": "AMP deaminase", "gene_name": "AMPD", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P43287-1", "protein_name": "Aquaporin PIP2-2", "gene_name": "PIP2-2; PIP2B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P30302-1", "protein_name": "Aquaporin PIP2-3", "gene_name": "PIP2-3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P42763-1", "protein_name": "Dehydrin ERD14", "gene_name": "ERD14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P43286-1", "protein_name": "Aquaporin PIP2-1", "gene_name": "PIP2-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FIQ0-1", "protein_name": "Probable ADP-ribosylation factor GTPase-activating protein AGD9", "gene_name": "AGD9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LQ55-1", "protein_name": "Dynamin-2B", "gene_name": "DRP2B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZVX8-1", "protein_name": "Probable aquaporin PIP2-8", "gene_name": "PIP2-8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q96303-1", "protein_name": "Inorganic phosphate transporter 1-4", "gene_name": "PHT1-4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C9B9-1", "protein_name": "Inorganic pyrophosphatase TTM1", "gene_name": "TTM1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FME2-1", "protein_name": "Nuclear transport factor 2", "gene_name": "NTF2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FMM3-1", "protein_name": "Protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1", "gene_name": "EXA1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LES3-1", "protein_name": "ABSCISIC ACID-INSENSITIVE 5-like protein 2", "gene_name": "DPBF3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S7P9-1", "protein_name": "SNAP25 homologous protein SNAP33", "gene_name": "SNAP33", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XIE2-1", "protein_name": "ABC transporter G family member 36", "gene_name": "ABCG36", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FF53-1", "protein_name": "Probable aquaporin PIP2-4", "gene_name": "PIP2-4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FXI5-1", "protein_name": "Protein IQ-DOMAIN 32", "gene_name": "IQD32", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FND9-1", "protein_name": "Probable galactinol--sucrose galactosyltransferase 5", "gene_name": "RFS5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LP11-1", "protein_name": "AAA-ATPase At1g43910", "gene_name": "F9C16.7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q03251-1", "protein_name": "Glycine-rich RNA-binding protein 8", "gene_name": "RBG8; RBGA6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P54144-1", "protein_name": "Ammonium transporter 1 member 1", "gene_name": "AMT1-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P93004-1", "protein_name": "Aquaporin PIP2-7", "gene_name": "PIP2-7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WW17-1", "protein_name": "Protein REDUCED WALL ACETYLATION 2", "gene_name": "RWA2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38858-1", "protein_name": "Calreticulin-2", "gene_name": 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"UniProtKB", "id": "P48347", "url": "https://www.uniprot.org/uniprotkb/P48347" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "phosphorylation": [ { "start_pos": 244, "end_pos": 244, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "P48347", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P48347" }, { "database": "PubMed", "id": "20466843", "url": "https://pubmed.ncbi.nlm.nih.gov/20466843" }, { "database": "PubMed", "id": "20733066", "url": "https://pubmed.ncbi.nlm.nih.gov/20733066" }, { "database": "PubMed", "id": "23572148", "url": "https://pubmed.ncbi.nlm.nih.gov/23572148" } ], "site_lbl": "Thr244", "uniprot_canonical_ac": "P48347-1" }, { "start_pos": 96, "end_pos": 96, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "Phosphoserine", "evidence": [ { "database": 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"gene_name": "GRF8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P42645-1", "protein_name": "14-3-3-like protein GF14 upsilon", "gene_name": "GRF5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P46077-1", "protein_name": "14-3-3-like protein GF14 phi", "gene_name": "GF14; GRF4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q96299-1", "protein_name": "14-3-3-like protein GF14 mu", "gene_name": "GRF9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q96300-1", "protein_name": "14-3-3-like protein GF14 nu", "gene_name": "GRF7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P48349-1", "protein_name": "14-3-3-like protein G-BOX factor 14 lambda", "gene_name": "GRF6", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P48347", "url": "https://www.uniprot.org/uniprotkb/P48347" } ], "common_name": "Mouse-ear cress", "glygen_name": 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"1994", "authors": "Hartmann E, Prehn S", "reference": { "type": "PubMed", "id": "8050590", "url": "https://pubmed.ncbi.nlm.nih.gov/8050590" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P45434-1", "protein_name": "Translocon-associated protein subunit alpha", "gene_name": "F26H11.8; F26H11_8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P43307-1", "protein_name": "Translocon-associated protein subunit alpha", "gene_name": "SSR1", "tax_name": "Human" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P45434", "url": "https://www.uniprot.org/uniprotkb/P45434" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.8050590", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", 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"protein_name": "G-box-binding factor 3", "gene_name": "GBF3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P42774-1", "protein_name": "G-box-binding factor 1", "gene_name": "GBF1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P42775-1", "protein_name": "G-box-binding factor 2", "gene_name": "GBF2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P42776", "url": "https://www.uniprot.org/uniprotkb/P42776" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.1373374", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { 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Natl. Acad. Sci. U.S.A.", "date": "1994", "authors": "Menkens A E, Cashmore A R", "reference": { "type": "PubMed", "id": "8146148", "url": "https://pubmed.ncbi.nlm.nih.gov/8146148" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P42776-1", "protein_name": "G-box-binding factor 3", "gene_name": "GBF3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P42777-1", "protein_name": "G-box-binding factor 4", "gene_name": "GBF4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P42775-1", "protein_name": "G-box-binding factor 2", "gene_name": "GBF2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P42776", "url": "https://www.uniprot.org/uniprotkb/P42776" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.8146148", "abstract": "", "glycosylation": [], "mutagenesis": 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{ "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Type 4 metallothionein genes are involved in regulating Zn ion accumulation in late embryo and in controlling early seedling growth in Arabidopsis.", "journal": "Plant, cell & environment", "date": "2012-04", "authors": "Ren Yujun, Liu Yang, Chen Hongyu, Li Gang, Zhang Xuelian, Zhao Jie", "reference": { "type": "PubMed", "id": "22014117", "url": "https://pubmed.ncbi.nlm.nih.gov/22014117" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q42377-1", "protein_name": "Metallothionein-like protein 4B", "gene_name": "ATMT4B; MT4B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P93746-1", "protein_name": "Metallothionein-like protein 4A", "gene_name": "ATMT4A; MT4A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38804-1", "protein_name": "Metallothionein-like protein 1C", "gene_name": "MT1C", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q42377", "url": "https://www.uniprot.org/uniprotkb/Q42377" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], 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Biochemical and genetic characterization of the endoplasmic reticulum linoleoyl desaturase.", "journal": "The Journal of biological chemistry", "date": "1993-08-05", "authors": "Browse J, McConn M, James D, Miquel M", "reference": { "type": "PubMed", "id": "8102138", "url": "https://pubmed.ncbi.nlm.nih.gov/8102138" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P48623-1", "protein_name": "Acyl-lipid omega-3 desaturase (cytochrome b5), endoplasmic reticulum", "gene_name": "FAD3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P48623", "url": "https://www.uniprot.org/uniprotkb/P48623" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.8102138", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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[] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The small subunit 1 of the Arabidopsis isopropylmalate isomerase is required for normal growth and development and the early stages of glucosinolate formation.", "journal": "PloS one", "date": "2014", "authors": "Imhof Janet, Huber Florian, Reichelt Michael, Gershenzon Jonathan, Wiegreffe Christoph, L\u00e4chler Kurt, Binder Stefan", "reference": { "type": "PubMed", "id": "24608865", "url": "https://pubmed.ncbi.nlm.nih.gov/24608865" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9ZW85-1", "protein_name": "3-isopropylmalate dehydratase small subunit 1", "gene_name": "IPMI; SSU1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZW84-1", "protein_name": "3-isopropylmalate dehydratase small subunit 2", "gene_name": "SSU2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LYT7-1", "protein_name": "3-isopropylmalate dehydratase small subunit 3", "gene_name": "SSU3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZW85", "url": 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and Tissue- as Well as Plastid Type-Specific Expression Define the Roles of Distinct Small Subunits of Isopropylmalate Isomerase.", "journal": "Frontiers in plant science", "date": "2020", "authors": "L\u00e4chler Kurt, Clauss Karen, Imhof Janet, Crocoll Christoph, Schulz Alexander, Halkier Barbara Ann, Binder Stefan", "reference": { "type": "PubMed", "id": "32612621", "url": "https://pubmed.ncbi.nlm.nih.gov/32612621" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9ZW85-1", "protein_name": "3-isopropylmalate dehydratase small subunit 1", "gene_name": "IPMI; SSU1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZW84-1", "protein_name": "3-isopropylmalate dehydratase small subunit 2", "gene_name": "SSU2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LYT7-1", "protein_name": "3-isopropylmalate dehydratase small subunit 3", "gene_name": "SSU3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "Isolation and molecular characterization of PosF21, an Arabidopsis thaliana gene which shows characteristics of a b-Zip class transcription factor.", "journal": "Plant J.", "date": "1991", "authors": "Aeschbacher R A, Schrott M, Potrykus I, Saul M W", "reference": { "type": "PubMed", "id": "1844885", "url": "https://pubmed.ncbi.nlm.nih.gov/1844885" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q04088-1", "protein_name": "Probable transcription factor PosF21", "gene_name": "POSF21", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q04088", "url": "https://www.uniprot.org/uniprotkb/Q04088" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.1844885", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": 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Chem.", "date": "1995", "authors": "Guan Y, Rawsthorne S, Scofield G, Shaw P, Doonan J", "reference": { "type": "PubMed", "id": "7890655", "url": "https://pubmed.ncbi.nlm.nih.gov/7890655" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q0WQF7-1", "protein_name": "Dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial", "gene_name": "LTA3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q0WQF7", "url": "https://www.uniprot.org/uniprotkb/Q0WQF7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.7890655", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } 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U.S.A.", "date": "1994", "authors": "Bender J, Fink G R", "reference": { "type": "PubMed", "id": "7991592", "url": "https://pubmed.ncbi.nlm.nih.gov/7991592" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P51566-1", "protein_name": "Serine/threonine-protein kinase AFC1", "gene_name": "AFC1; FC1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P51568-1", "protein_name": "Serine/threonine-protein kinase AFC3", "gene_name": "AFC3; AME3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P51567-1", "protein_name": "Serine/threonine-protein kinase AFC2", "gene_name": "AFC2; FC2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P51566", "url": "https://www.uniprot.org/uniprotkb/P51566" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.7991592", 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W, Whelan James", "reference": { "type": "PubMed", "id": "17981999", "url": "https://pubmed.ncbi.nlm.nih.gov/17981999" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P82872-1", "protein_name": "Mitochondrial import receptor subunit TOM20-1", "gene_name": "TOM20-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O64471-1", "protein_name": "Mitochondrial outer membrane import complex protein METAXIN", "gene_name": "MTX1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P82873-1", "protein_name": "Mitochondrial import receptor subunit TOM20-2", "gene_name": "TOM20-2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P82805-1", "protein_name": "Mitochondrial import receptor subunit TOM20-4", "gene_name": "TOM20-4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P82874-1", "protein_name": "Mitochondrial import receptor subunit TOM20-3", "gene_name": "TOM20-3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P82872", "url": "https://www.uniprot.org/uniprotkb/P82872" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.17981999", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "KMS1 and KMS2, two plant endoplasmic reticulum proteins involved in the early secretory pathway.", "journal": "The Plant journal : for cell and molecular biology", "date": "2011-05", "authors": "Wang Pengwei, Hummel Eric, Osterrieder Anne, Meyer Andreas J, Frigerio Lorenzo, Sparkes Imogen, Hawes Chris", "reference": { "type": "PubMed", "id": "21294794", "url": "https://pubmed.ncbi.nlm.nih.gov/21294794" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q5XF36-1", "protein_name": "Vacuole membrane protein KMS1", "gene_name": "KMS1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4I8Q7-1", "protein_name": "Vacuole membrane protein KMS2", "gene_name": "KMS2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q5XF36", "url": "https://www.uniprot.org/uniprotkb/Q5XF36" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.21294794", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": 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[] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "TPK1, a Ca(2+)-regulated Arabidopsis vacuole two-pore K(+) channel is activated by 14-3-3 proteins.", "journal": "Plant J.", "date": "2007", "authors": "Latz A, Becker D, Hekman M, M\u00fcller T, Beyhl D, Marten I, Eing C, Fischer A, Dunkel M, Bertl A, Rapp U R, Hedrich R", "reference": { "type": "PubMed", "id": "17764516", "url": "https://pubmed.ncbi.nlm.nih.gov/17764516" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P42643-1", "protein_name": "14-3-3-like protein GF14 chi", "gene_name": "GRF1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FL25-1", "protein_name": "Two-pore potassium channel 2", "gene_name": "TPK2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S6Z8-1", "protein_name": "Two-pore potassium channel 5", "gene_name": "TPK5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XFR0-1", "protein_name": "Potassium inward rectifier (Kir)-like channel 3", "gene_name": "KCO3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LBL1-1", "protein_name": "Two-pore potassium channel 1", "gene_name": "TPK1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P48349-1", "protein_name": "14-3-3-like protein G-BOX factor 14 lambda", "gene_name": "GRF6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SVV6-1", "protein_name": "Two-pore potassium channel 3", "gene_name": "TPK3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P42643", "url": "https://www.uniprot.org/uniprotkb/P42643" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "mutagenesis": [ { "start_pos": 42, "end_pos": 42, "sequence_org": "S", "sequence_mut": "A", "comment": "Loss of interaction with GRF6, but no effect on vacuolar targeting.", "evidence": [ { "database": "UniProtKB", "id": "Q8LBL1", "url": "https://www.uniprot.org/uniprotkb/Q8LBL1" }, { "database": "PubMed", "id": "17764516", "url": 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Determining novel functions of Arabidopsis 14-3-3 proteins in central metabolic processes.", "journal": "BMC systems biology", "date": 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"field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", 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"GRF3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P42643", "url": "https://www.uniprot.org/uniprotkb/P42643" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.7870824", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Five cDNAs encoding Arabidopsis GF14 proteins.", "journal": "Plant Physiol.", "date": "1994", "authors": "Lu G, Rooney M F, Wu K, Ferl R J", "reference": { "type": "PubMed", "id": "7972511", "url": "https://pubmed.ncbi.nlm.nih.gov/7972511" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P42643-1", "protein_name": "14-3-3-like protein GF14 chi", "gene_name": "GRF1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P42645-1", "protein_name": "14-3-3-like protein GF14 upsilon", "gene_name": "GRF5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P46077-1", "protein_name": "14-3-3-like protein GF14 phi", "gene_name": "GF14; GRF4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P42644-1", "protein_name": "14-3-3-like protein GF14 psi", "gene_name": "GRF3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P42643", "url": "https://www.uniprot.org/uniprotkb/P42643" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.7972511", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "De-etiolated 1 and damaged DNA binding protein 1 interact to regulate Arabidopsis photomorphogenesis.", "journal": "Curr. Biol.", "date": "2002", "authors": "Schroeder Dana F, Gahrtz Manfred, Maxwell Bridey B, Cook R Kimberley, Kan Jack M, Alonso Jos\u00e9 M, Ecker Joseph R, Chory Joanne", "reference": { "type": "PubMed", "id": "12225661", "url": "https://pubmed.ncbi.nlm.nih.gov/12225661" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P48732-1", "protein_name": "Light-mediated development protein DET1", "gene_name": "DET1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M0V3-1", "protein_name": "DNA damage-binding protein 1a", "gene_name": "DDB1A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49552-1", "protein_name": "DNA damage-binding protein 1b", "gene_name": "DDB1B", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P48732", "url": "https://www.uniprot.org/uniprotkb/P48732" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12225661", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The photomorphogenesis regulator DET1 binds the amino-terminal tail of histone H2B in a nucleosome context.", "journal": "Curr. Biol.", "date": "2002", "authors": "Benvenuto Giovanna, Formiggini Fabio, Laflamme Pierre, Malakhov Mikhail, Bowler Chris", "reference": { "type": "PubMed", "id": "12225670", "url": "https://pubmed.ncbi.nlm.nih.gov/12225670" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P48732-1", "protein_name": "Light-mediated development protein DET1", "gene_name": "DET1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P48732", "url": "https://www.uniprot.org/uniprotkb/P48732" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12225670", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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}, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Targeted degradation of abscisic acid receptors is mediated by the ubiquitin ligase substrate adaptor DDA1 in Arabidopsis.", "journal": "Plant Cell", "date": "2014", "authors": "Irigoyen Mar\u00eda Luisa, Iniesto Elisa, Rodriguez Lesia, Puga Mar\u00eda Isabel, Yanagawa Yuki, Pick Elah, Strickland Elizabeth, Paz-Ares Javier, Wei Ning, De Jaeger Geert, Rodriguez Pedro L, Deng Xing Wang, Rubio Vicente", "reference": { "type": "PubMed", "id": "24563205", "url": "https://pubmed.ncbi.nlm.nih.gov/24563205" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P48732-1", "protein_name": "Light-mediated development protein DET1", "gene_name": "DET1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M0V3-1", "protein_name": "DNA damage-binding protein 1a", "gene_name": "DDB1A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FGM1-1", "protein_name": "Abscisic acid receptor PYL8", "gene_name": "PYL8; RCAR3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80920-1", "protein_name": "Abscisic acid receptor PYL4", "gene_name": "PYL4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84MC7-1", "protein_name": "Abscisic acid receptor PYL9", "gene_name": "PYL9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FFS4-1", "protein_name": "DET1- and DDB1-associated protein 1", "gene_name": "DDA1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49552-1", "protein_name": "DNA damage-binding protein 1b", "gene_name": "DDB1B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LJD7-1", "protein_name": "Constitutive photomorphogenesis protein 10", "gene_name": "COP10", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P48732", "url": "https://www.uniprot.org/uniprotkb/P48732" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.24563205", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 8 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "DET1-mediated degradation of a SAGA-like deubiquitination module controls H2Bub homeostasis.", "journal": "eLife", "date": "2018-09-07", "authors": "Nassrallah Amr, Roug\u00e9e Martin, Bourbousse Clara, Drevensek Stephanie, Fonseca Sandra, Iniesto Elisa, Ait-Mohamed Ouardia, Deton-Cabanillas Anne-Flore, Zabulon Gerald, Ahmed Ikhlak, Stroebel David, Masson Vanessa, Lombard Berangere, Eeckhout Dominique, Gevaert Kris, Loew Damarys, Genovesio Auguste, Breyton Cecile, De Jaeger Geert, Bowler Chris, Rubio Vicente, Barneche Fredy", "reference": { "type": "PubMed", "id": "30192741", "url": "https://pubmed.ncbi.nlm.nih.gov/30192741" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P48732-1", "protein_name": "Light-mediated development protein DET1", "gene_name": "DET1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94BV2-1", "protein_name": "SAGA-associated factor 11", "gene_name": "SGF11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LEW0-1", "protein_name": "Ubiquitin C-terminal hydrolase 22", "gene_name": "UBP22", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6NQ54-1", "protein_name": "Transcription and mRNA export factor ENY2", "gene_name": "ENY2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P48732", "url": "https://www.uniprot.org/uniprotkb/P48732" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.30192741", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "DET1, a negative regulator of light-mediated development and gene expression in Arabidopsis, encodes a novel nuclear-localized protein.", "journal": "Cell", "date": "1994", "authors": "Pepper A, Delaney T, Washburn T, Poole D, Chory J", "reference": { "type": "PubMed", "id": "8033202", "url": "https://pubmed.ncbi.nlm.nih.gov/8033202" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P48732-1", "protein_name": "Light-mediated development protein DET1", "gene_name": "DET1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P48732", "url": "https://www.uniprot.org/uniprotkb/P48732" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.8033202", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "DET1 represses a chloroplast blue light-responsive promoter in a developmental and tissue-specific manner in Arabidopsis thaliana.", "journal": "The Plant journal : for cell and molecular biology", "date": "1998-04", "authors": "Christopher D A, Hoffer P H", "reference": { "type": "PubMed", "id": "9681024", "url": "https://pubmed.ncbi.nlm.nih.gov/9681024" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P48732-1", "protein_name": "Light-mediated development protein DET1", "gene_name": "DET1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P48732", "url": "https://www.uniprot.org/uniprotkb/P48732" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.9681024", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", 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}, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "An extensive survey of CK2 alpha and beta subunits in Arabidopsis: multiple isoforms exhibit differential subcellular localization.", "journal": "Plant Cell Physiol.", "date": "2006", "authors": "Salinas Paula, Fuentes Daniela, Vidal Elena, Jordana Xavier, Echeverria Manuel, Holuigue Loreto", "reference": { "type": "PubMed", "id": "16926165", "url": "https://pubmed.ncbi.nlm.nih.gov/16926165" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P40229-1", "protein_name": "Casein kinase II subunit beta-2", "gene_name": "CKB2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80507-1", "protein_name": "Putative casein kinase II subunit beta-4", "gene_name": "CKB4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O64816-1", "protein_name": "Casein kinase II subunit alpha-4, chloroplastic", "gene_name": "CKA4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O64817-1", "protein_name": "Casein kinase II subunit alpha-3", "gene_name": "CKA3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P40228-1", "protein_name": "Casein kinase II subunit beta-1", "gene_name": "CKB1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q08467-1", "protein_name": "Casein kinase II subunit alpha-1", "gene_name": "CKA1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81275-1", "protein_name": "Casein kinase II subunit beta-3", "gene_name": "CKB3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q08466-1", "protein_name": "Casein kinase II subunit alpha-2", "gene_name": "CKA2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P40229", "url": "https://www.uniprot.org/uniprotkb/P40229" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16926165", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 8 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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U.S.A.", "date": "1998", "authors": "Sugano S, Andronis C, Green R M, Wang Z Y, Tobin E M", "reference": { "type": "PubMed", "id": "9724822", "url": "https://pubmed.ncbi.nlm.nih.gov/9724822" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P40229-1", "protein_name": "Casein kinase II subunit beta-2", "gene_name": "CKB2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P40228-1", "protein_name": "Casein kinase II subunit beta-1", "gene_name": "CKB1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P92973-1", "protein_name": "Protein CCA1", "gene_name": "CCA1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81275-1", "protein_name": "Casein kinase II subunit beta-3", "gene_name": "CKB3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P40229", "url": "https://www.uniprot.org/uniprotkb/P40229" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.9724822", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Plant homeodomain protein involved in transcriptional regulation of a pathogen defense-related gene.", "journal": "Plant Cell", "date": "1994", "authors": "Korfhage U, Trezzini G F, Meier I, Hahlbrock K, Somssich I E", "reference": { "type": "PubMed", "id": "7913642", "url": "https://pubmed.ncbi.nlm.nih.gov/7913642" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P48785-1", "protein_name": "Pathogenesis-related homeodomain protein", "gene_name": "PRHA; 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V, Lesemann Dietrich-E, Schiemann Joachim, Morozov Sergey Yu, Kellmann Jan-W", "reference": { "type": "PubMed", "id": "16903353", "url": "https://pubmed.ncbi.nlm.nih.gov/16903353" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q1PE49-1", "protein_name": "Protein At-4/1", "gene_name": "F20B18.130; F20B18_130", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q1PE49", "url": "https://www.uniprot.org/uniprotkb/Q1PE49" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16903353", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", 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{ "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The Arabidopsis phenylalanine ammonia lyase gene family: kinetic characterization of the four PAL isoforms.", "journal": "Phytochemistry", "date": "2004-06", "authors": "Cochrane Fiona C, Davin Laurence B, Lewis Norman G", "reference": { "type": "PubMed", "id": "15276452", "url": "https://pubmed.ncbi.nlm.nih.gov/15276452" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P45725-1", "protein_name": "Phenylalanine ammonia-lyase 3", "gene_name": "PAL3", "tax_name": "Mouse-ear cress" }, { 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The phenylalanine ammonia-lyase gene family in Arabidopsis thaliana.", "journal": "Plant Mol. Biol.", "date": "1995", "authors": "Wanner L A, Li G, Ware D, Somssich I E, Davis K R", "reference": { "type": "PubMed", "id": "7888622", "url": "https://pubmed.ncbi.nlm.nih.gov/7888622" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P45725-1", "protein_name": "Phenylalanine ammonia-lyase 3", "gene_name": "PAL3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P45724-1", "protein_name": "Phenylalanine ammonia-lyase 2", "gene_name": "PAL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P35510-1", "protein_name": "Phenylalanine ammonia-lyase 1", "gene_name": "PAL1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P45725", "url": "https://www.uniprot.org/uniprotkb/P45725" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.7888622", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Genomic sequence of a calnexin homolog from Arabidopsis thaliana.", "journal": "Plant Physiol.", "date": "1994", "authors": "Boyce J M, Coates D, Fricker M D, Evans D E", "reference": { "type": "PubMed", "id": "7846171", "url": "https://pubmed.ncbi.nlm.nih.gov/7846171" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q38798-1", "protein_name": "Calnexin homolog 2", "gene_name": "T2I1.50; T2I1_50", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q38798", "url": "https://www.uniprot.org/uniprotkb/Q38798" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.7846171", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "PAH-domain-specific interactions of the Arabidopsis transcription coregulator SIN3-LIKE1 (SNL1) with telomere-binding protein 1 and ALWAYS EARLY2 Myb-DNA binding factors.", "journal": "J. Mol. Biol.", "date": "2010", "authors": "Bowen Adam J, Gonzalez Deyarina, Mullins Jonathan G L, Bhatt Anuj M, Martinez Alberto, Conlan R Steven", "reference": { "type": "PubMed", "id": "19962994", "url": "https://pubmed.ncbi.nlm.nih.gov/19962994" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LFQ3-1", "protein_name": "Paired amphipathic helix protein Sin3-like 2", "gene_name": "SNL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6A333-1", "protein_name": "Protein ALWAYS EARLY 2", "gene_name": "ALY2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FHW7-1", "protein_name": "SKP1-like protein 1B", "gene_name": "SKP1B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O48686-1", "protein_name": "Paired amphipathic helix protein Sin3-like 3", "gene_name": "SNL3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22161-1", "protein_name": "Protein ARABIDILLO 1", "gene_name": "FBX5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XIE1-1", "protein_name": "Paired amphipathic helix protein Sin3-like 5", "gene_name": "SNL5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XIK6-1", "protein_name": "Paired amphipathic helix protein Sin3-like 6", "gene_name": "SNL6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6A332-1", "protein_name": "Protein ALWAYS EARLY 3", "gene_name": "ALY3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O04539-1", "protein_name": "Paired amphipathic helix protein Sin3-like 4", "gene_name": "SNL4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZ40-1", "protein_name": "U-box domain-containing protein 14", "gene_name": "PUB14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W4L5-1", "protein_name": "B3 domain-containing transcription repressor VAL1", "gene_name": "VAL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FFY9-1", "protein_name": "Telomere repeat-binding protein 4", "gene_name": "TRP4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SRH9-1", "protein_name": "Paired amphipathic helix protein Sin3-like 1", "gene_name": "SNL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LJT8-1", "protein_name": "TSL-kinase interacting protein 1", "gene_name": "TKI1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q5HZ36-1", "protein_name": "GATA transcription factor 21", "gene_name": "GATA21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SNB9-1", "protein_name": "Telomere repeat-binding protein 2", "gene_name": "TRFL1; TRP2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LFQ3", "url": "https://www.uniprot.org/uniprotkb/Q9LFQ3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.19962994", "abstract": 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of a copper transporter family in Arabidopsis thaliana.", "journal": "Plant molecular biology", "date": "2003-03", "authors": "Sancen\u00f3n Vicente, Puig Sergi, Mira Helena, Thiele Dennis J, Pe\u00f1arrubia Lola", "reference": { "type": "PubMed", "id": "12650623", "url": "https://pubmed.ncbi.nlm.nih.gov/12650623" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q39065-1", "protein_name": "Copper transporter 1", "gene_name": "COPT1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9STG2-1", "protein_name": "Copper transporter 2", "gene_name": "COPT2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93VM8-1", "protein_name": "Copper transporter 5", "gene_name": "COPT5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8SAA5-1", 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"Molecular characterization of a putative Arabidopsis thaliana copper transporter and its yeast homologue.", "journal": "The Journal of biological chemistry", "date": "1995-11-24", "authors": "Kampfenkel K, Kushnir S, Babiychuk E, Inz\u00e9 D, Van Montagu M", "reference": { "type": "PubMed", "id": "7499355", "url": "https://pubmed.ncbi.nlm.nih.gov/7499355" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q39065-1", "protein_name": "Copper transporter 1", "gene_name": "COPT1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P38865-1", "protein_name": "Copper transport protein CTR2", "gene_name": "CTR2", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q39065", "url": "https://www.uniprot.org/uniprotkb/Q39065" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": 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}, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "BYPASS1-LIKE, A DUF793 Family Protein, Participates in Freezing Tolerance via the CBF Pathway in Arabidopsis.", "journal": "Frontiers in plant science", "date": "2019", "authors": "Chen Tao, Chen Jia-Hui, Zhang Wei, Yang Gang, Yu Li-Juan, Li Dong-Ming, Li Bo, Sheng Hong-Mei, Zhang Hua, An Li-Zhe", "reference": { "type": "PubMed", "id": "31297122", "url": "https://pubmed.ncbi.nlm.nih.gov/31297122" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P48348-1", "protein_name": "14-3-3-like protein G-BOX factor 14 kappa", "gene_name": "GRF8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P48349-1", "protein_name": "14-3-3-like protein G-BOX factor 14 lambda", "gene_name": "GRF6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M9U5-1", "protein_name": "Protein BYPASS1-LIKE", "gene_name": "B1L", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P48348", "url": "https://www.uniprot.org/uniprotkb/P48348" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.31297122", 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Chem.", "date": "1994", "authors": "Wegl\u00f6hner W, Subramanian A R", "reference": { "type": "PubMed", "id": "8125949", "url": "https://pubmed.ncbi.nlm.nih.gov/8125949" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P36210-1", "protein_name": "Large ribosomal subunit protein bL12cz", "gene_name": "RPL12A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P36211-1", "protein_name": "Large ribosomal subunit protein bL12cy", "gene_name": "RPL12B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P36212-1", "protein_name": "Large ribosomal subunit protein bL12cx", "gene_name": "RPL12C", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P36210", "url": "https://www.uniprot.org/uniprotkb/P36210" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.8125949", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Isolation and characterization of an Arabidopsis thaliana gene for the 54 kDa subunit of the signal recognition particle.", "journal": "Plant Mol. Biol.", "date": "1993", "authors": "Lindstrom J T, Chu B, Belanger F C", "reference": { "type": "PubMed", "id": "8292790", "url": "https://pubmed.ncbi.nlm.nih.gov/8292790" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P37106-1", "protein_name": "Signal recognition particle subunit SRP54 1", "gene_name": "SRP-54A", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P37106", "url": "https://www.uniprot.org/uniprotkb/P37106" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.8292790", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "orf250 encodes a second subunit of an ABC-type heme transporter in Oenothera mitochondria.", "journal": "Mol. Gen. Genet.", "date": "1995", "authors": "Jekabsons W, Schuster W", "reference": { "type": "PubMed", "id": "7862087", "url": "https://pubmed.ncbi.nlm.nih.gov/7862087" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P39697-1", "protein_name": "Small ribosomal subunit protein uS19m", "gene_name": "RPS19", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P39697", "url": "https://www.uniprot.org/uniprotkb/P39697" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.7862087", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A novel RNA-binding protein associated with cell plate formation.", "journal": "Plant Physiol.", "date": "2008", "authors": "Ma Lian, Xie Bo, Hong Zonglie, Verma Desh Pal S, Zhang Zhongming", "reference": { "type": "PubMed", "id": "18621982", "url": "https://pubmed.ncbi.nlm.nih.gov/18621982" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P41917-1", "protein_name": "GTP-binding nuclear protein Ran-2", "gene_name": "RAN2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S3C9-1", "protein_name": "Phragmoplastin DRP1D", "gene_name": "DRP1D", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84XF3-1", "protein_name": "Phragmoplastin DRP1B", "gene_name": "DL1B; DRP1B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LF21-1", "protein_name": "Phragmoplastin DRP1C", "gene_name": "DRP1C", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P42697-1", "protein_name": "Phragmoplastin DRP1A", "gene_name": "DL1; DRP1A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FNX5-1", "protein_name": "Phragmoplastin DRP1E", "gene_name": "DRP1E", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P92978-1", "protein_name": "Rac-like GTP-binding protein ARAC11", "gene_name": "ARAC11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M3B8-1", "protein_name": "Phragmoplastin interacting protein 1", "gene_name": "PHIP1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P41917", "url": "https://www.uniprot.org/uniprotkb/P41917" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.18621982", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 8 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "Phenotype of the fission yeast cell cycle regulatory mutant pim1-46 is suppressed by a tobacco cDNA encoding a small, Ran-like GTP-binding protein.", "journal": "Plant J.", "date": "1994", "authors": "Merkle T, Haizel T, Matsumoto T, Harter K, Dallmann G, Nagy F", "reference": { "type": "PubMed", "id": "7987414", "url": "https://pubmed.ncbi.nlm.nih.gov/7987414" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P41917-1", "protein_name": "GTP-binding nuclear protein Ran-2", "gene_name": "RAN2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P41916-1", "protein_name": "GTP-binding nuclear protein Ran-1", "gene_name": "RAN1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P41917", "url": "https://www.uniprot.org/uniprotkb/P41917" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", 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"Haizel T, Merkle T, Pay A, Fejes E, Nagy F", "reference": { "type": "PubMed", "id": "9025305", "url": "https://pubmed.ncbi.nlm.nih.gov/9025305" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P41917-1", "protein_name": "GTP-binding nuclear protein Ran-2", "gene_name": "RAN2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RWG8-1", "protein_name": "Ran-binding protein 1 homolog b", "gene_name": "RANBP1B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P41916-1", "protein_name": "GTP-binding nuclear protein Ran-1", "gene_name": "RAN1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8H156-1", "protein_name": "GTP-binding nuclear protein Ran-3", "gene_name": "RAN3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LMK7-1", "protein_name": "Ran-binding protein 1 homolog a", "gene_name": "RANBP1A", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P41917", "url": "https://www.uniprot.org/uniprotkb/P41917" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.9025305", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": 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[] } ] }, { "title": "Interaction of a 14-3-3 protein with the plant microtubule-associated protein EDE1.", "journal": "Annals of botany", "date": "2011-05", "authors": "Pignocchi Cristina, Doonan John H", "reference": { "type": "PubMed", "id": "21558460", "url": "https://pubmed.ncbi.nlm.nih.gov/21558460" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P42645-1", "protein_name": "14-3-3-like protein GF14 upsilon", "gene_name": "GRF5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80588-1", "protein_name": "Protein ENDOSPERM DEFECTIVE 1", "gene_name": "EDE1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P42645", "url": "https://www.uniprot.org/uniprotkb/P42645" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.21558460", "abstract": "", 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Yan, Kong Qing, Zhang Yuelin", "reference": { "type": "PubMed", "id": "25267732", "url": "https://pubmed.ncbi.nlm.nih.gov/25267732" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P42698-1", "protein_name": "DNA-damage-repair/toleration protein 111", "gene_name": "DRT111", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JCU0-1", "protein_name": "SUPPRESSOR OF ABI3-5", "gene_name": "SUA", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "D7SFH9-1", "protein_name": "Protein SUPPRESSOR OF NPR1-1 CONSTITUTIVE 4", "gene_name": "LRK10L-2.6; SNC4", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P42698", "url": "https://www.uniprot.org/uniprotkb/P42698" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.25267732", "abstract": "", "glycosylation": 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Ruijiao, Zhu Ling, Salom\u00e9 Patrice A, Mancini Estefania, Marshall Carine M, Harmon Frank G, Yanovsky Marcelo J, Weigel Detlef, Huq Enamul", "reference": { "type": "PubMed", "id": "28760995", "url": "https://pubmed.ncbi.nlm.nih.gov/28760995" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P42698-1", "protein_name": "DNA-damage-repair/toleration protein 111", "gene_name": "DRT111", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L716-1", "protein_name": "Splicing factor U2af large subunit B", "gene_name": "U2AF65B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P43333-1", "protein_name": "U2 small nuclear ribonucleoprotein A'", "gene_name": "U2A'", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P14713-1", "protein_name": "Phytochrome B", "gene_name": "PHYB", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S709-1", "protein_name": "Splicing factor U2af small subunit A", "gene_name": "ATU2AF35A; U2AF35A", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P42698", "url": "https://www.uniprot.org/uniprotkb/P42698" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.28760995", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { 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"o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] } ]