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"count": 0 } ], "sort_fields": [] } ] }, { "title": "The role of SPI1-TYROBP-FCER1G network in oncogenesis and prognosis of osteosarcoma, and its association with immune infiltration.", "journal": "BMC cancer", "date": "2022", "authors": "Li J, Shi H, Yuan Z, Wu Z, Li H, Liu Y, Lu M, Lu M", "reference": { "type": "PubMed", "id": "35078433", "url": "https://pubmed.ncbi.nlm.nih.gov/35078433" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P30273-1", "protein_name": "High affinity immunoglobulin epsilon receptor subunit gamma", "gene_name": "FCER1G", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43914-1", "protein_name": "TYRO protein tyrosine kinase-binding protein", "gene_name": "TYROBP", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P30273", "url": "https://www.uniprot.org/uniprotkb/P30273" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo 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Cell Biol.", "date": "2002", "authors": "Ding J, Liu JJ, Kowal AS, Nardine T, Bhattacharya P, Lee A, Yang Y", "reference": { "type": "PubMed", "id": "12147674", "url": "https://pubmed.ncbi.nlm.nih.gov/12147674" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P46821-1", "protein_name": "Microtubule-associated protein 1B", "gene_name": "MAP1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2C0-1", "protein_name": "Gigaxonin", "gene_name": "GAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8CA72-1", "protein_name": "Gigaxonin", "gene_name": "Gan", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P14873-1", "protein_name": "Microtubule-associated protein 1B", "gene_name": "Map1b", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P46821", "url": "https://www.uniprot.org/uniprotkb/P46821" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12147674", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Hmob3 brain-specific sequence is a part of phylogenetically conserved human MAP1B gene 3'-untranslated region.", "journal": "Biomol. Eng.", "date": "2003", "authors": "Dergunova Lyudmila V, Raevskaya Natalja M, Vladychenskaya Irina P, Limborska Svetlana A", "reference": { "type": "PubMed", "id": "12684070", "url": "https://pubmed.ncbi.nlm.nih.gov/12684070" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P46821-1", "protein_name": "Microtubule-associated protein 1B", "gene_name": "MAP1B", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P46821", "url": "https://www.uniprot.org/uniprotkb/P46821" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12684070", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Cloning of a novel neuronally expressed orphan G-protein-coupled receptor which is up-regulated by erythropoietin, interacts with microtubule-associated protein 1b and colocalizes with the 5-hydroxytryptamine 2a receptor.", "journal": "J. Neurochem.", "date": "2004", "authors": "Maurer MH, Grunewald S, Gassler N, Rossner M, Propst F, Wurz R, Weber D, Kuner T, Kuschinsky W, Schneider A", "reference": { "type": "PubMed", "id": "15525354", "url": "https://pubmed.ncbi.nlm.nih.gov/15525354" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P46821-1", "protein_name": "Microtubule-associated protein 1B", "gene_name": "MAP1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7F4-1", "protein_name": "Transmembrane protein 185B", "gene_name": "TMEM185B", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2AF53-1", "protein_name": "Transmembrane protein 185A", "gene_name": "Tmem185a", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8NFB2-1", "protein_name": "Transmembrane protein 185A", "gene_name": "TMEM185A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8R3R5-1", "protein_name": "Transmembrane protein 185B", "gene_name": "Tmem185b", "tax_name": "Mouse" } ], "species": [ { "name": "Homo 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"database": "PubMed", "id": "26743006", "url": "https://pubmed.ncbi.nlm.nih.gov/26743006" } ], "site_lbl": "Thr1032", "uniprot_canonical_ac": "Q15648-1" } ], "record_id": "pubmed.26743006", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Checkpoint-dependent phosphorylation of Med1/TRAP220 in response to DNA damage.", "journal": "Acta biochimica et biophysica Sinica", "date": "2017", "authors": "Kim HJ, Yun J", "reference": { "type": "PubMed", "id": "28430840", "url": "https://pubmed.ncbi.nlm.nih.gov/28430840" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q15648-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 1", "gene_name": "MED1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q15648", "url": "https://www.uniprot.org/uniprotkb/Q15648" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 671, "end_pos": 671, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q15648", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q15648" }, { "database": "PubMed", "id": "28430840", "url": "https://pubmed.ncbi.nlm.nih.gov/28430840" } ], "site_lbl": "Ser671", "uniprot_canonical_ac": "Q15648-1" } ], "record_id": "pubmed.28430840", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Affinity switching of the LEDGF/p75 IBD interactome is governed by kinase-dependent phosphorylation.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2018", "authors": "Sharma S, Cermakova K, De Rijck J, Demeulemeester J, Fabry M, El Ashkar S, Van Belle S, Lepsik M, Tesina P, Duchoslav V, Novak P, Hubalek M, Srb P, Christ F, Rezacova P, Hodges HC, Debyser Z, Veverka V", "reference": { "type": "PubMed", "id": "29997176", "url": "https://pubmed.ncbi.nlm.nih.gov/29997176" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q15648-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 1", "gene_name": "MED1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBU7-1", "protein_name": "Protein DBF4 homolog A", "gene_name": "DBF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96GN5-1", "protein_name": "Cell division cycle-associated 7-like protein", "gene_name": "CDCA7L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q03164-1", "protein_name": "Histone-lysine N-methyltransferase 2A", "gene_name": "KMT2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75475-1", "protein_name": "PC4 and SFRS1-interacting protein", "gene_name": "PSIP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z3K3-1", "protein_name": "Pogo transposable element with ZNF domain", "gene_name": "POGZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96ST2-1", "protein_name": "Protein IWS1 homolog", "gene_name": "IWS1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q15648", "url": "https://www.uniprot.org/uniprotkb/Q15648" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 886, "end_pos": 886, "sequence_org": "S", "sequence_mut": "D", "comment": "Increased interaction with PSIP1; when associated with D-887 or D-887 and D-889.", "evidence": [ { "database": "UniProtKB", "id": "Q15648", "url": "https://www.uniprot.org/uniprotkb/Q15648" }, { "database": "PubMed", "id": "29997176", "url": "https://pubmed.ncbi.nlm.nih.gov/29997176" } ], "uniprot_canonical_ac": "Q15648-1" }, { "start_pos": 887, "end_pos": 887, "sequence_org": "S", "sequence_mut": "D", "comment": "Phosphomimetic mutant. Increased interaction with PSIP1; when associated with D-886 or D-886 and D-889.", "evidence": [ { "database": "UniProtKB", "id": "Q15648", "url": "https://www.uniprot.org/uniprotkb/Q15648" }, { "database": "PubMed", "id": "29997176", "url": "https://pubmed.ncbi.nlm.nih.gov/29997176" } ], "uniprot_canonical_ac": "Q15648-1" }, { "start_pos": 889, "end_pos": 889, "sequence_org": "S", "sequence_mut": "D", "comment": "Increased interaction with PSIP1; when associated with D-886 and D-887.", "evidence": [ { "database": "UniProtKB", "id": "Q15648", "url": "https://www.uniprot.org/uniprotkb/Q15648" }, { "database": "PubMed", "id": "29997176", "url": "https://pubmed.ncbi.nlm.nih.gov/29997176" } ], "uniprot_canonical_ac": "Q15648-1" }, { "start_pos": 625, "end_pos": 625, "sequence_org": "S", "sequence_mut": "D", "comment": "Phosphomimetic mutant. Increased interaction with PSIP1.", "evidence": [ { "database": "UniProtKB", "id": "Q9UBU7", "url": "https://www.uniprot.org/uniprotkb/Q9UBU7" }, { "database": "PubMed", "id": "29997176", "url": "https://pubmed.ncbi.nlm.nih.gov/29997176" } ], "uniprot_canonical_ac": "Q9UBU7-1" }, { "start_pos": 631, "end_pos": 631, "sequence_org": "F", "sequence_mut": "A", "comment": "Loss of interaction with PSIP1; when associated with A-634.", "evidence": [ { "database": "UniProtKB", "id": "Q9UBU7", "url": "https://www.uniprot.org/uniprotkb/Q9UBU7" }, { "database": "PubMed", "id": "29997176", "url": "https://pubmed.ncbi.nlm.nih.gov/29997176" } ], "uniprot_canonical_ac": "Q9UBU7-1" }, { "start_pos": 634, "end_pos": 634, "sequence_org": "F", "sequence_mut": "A", "comment": "Loss of interaction with PSIP1; when associated with A-631.", "evidence": [ { "database": "UniProtKB", "id": "Q9UBU7", "url": "https://www.uniprot.org/uniprotkb/Q9UBU7" }, { "database": "PubMed", "id": "29997176", "url": "https://pubmed.ncbi.nlm.nih.gov/29997176" } ], "uniprot_canonical_ac": "Q9UBU7-1" }, { "start_pos": 667, "end_pos": 667, "sequence_org": "S", "sequence_mut": "D", "comment": "Phosphomimetic mutant. Increased interaction with PSIP1; when associated with D-669.", "evidence": [ { "database": "UniProtKB", "id": "Q9UBU7", "url": "https://www.uniprot.org/uniprotkb/Q9UBU7" }, { "database": "PubMed", "id": "29997176", "url": "https://pubmed.ncbi.nlm.nih.gov/29997176" } ], "uniprot_canonical_ac": "Q9UBU7-1" }, { "start_pos": 669, "end_pos": 669, "sequence_org": "S", "sequence_mut": "D", "comment": "Phosphomimetic mutant. Increased interaction with PSIP1; when associated with D-667.", "evidence": [ { "database": "UniProtKB", "id": "Q9UBU7", "url": "https://www.uniprot.org/uniprotkb/Q9UBU7" }, { "database": "PubMed", "id": "29997176", "url": "https://pubmed.ncbi.nlm.nih.gov/29997176" } ], "uniprot_canonical_ac": "Q9UBU7-1" }, { "start_pos": 16, "end_pos": 16, "sequence_org": "I", "sequence_mut": "A", "comment": "Significant loss of interaction with PSIP1; when associated with A-17. Complete loss of interaction with PSIP1; when associated with A-17, A-72 and A-73.", "evidence": [ { "database": "UniProtKB", "id": "Q96GN5", "url": "https://www.uniprot.org/uniprotkb/Q96GN5" }, { "database": "PubMed", "id": "29997176", "url": "https://pubmed.ncbi.nlm.nih.gov/29997176" } ], "uniprot_canonical_ac": "Q96GN5-1" }, { "start_pos": 17, "end_pos": 17, "sequence_org": "F", "sequence_mut": "A", "comment": "Significant loss of interaction with PSIP1; when associated with A-16. Complete loss of interaction with PSIP1; when associated with A-16, A-72 and A-73.", "evidence": [ { "database": "UniProtKB", "id": "Q96GN5", "url": "https://www.uniprot.org/uniprotkb/Q96GN5" }, { "database": "PubMed", "id": "29997176", "url": "https://pubmed.ncbi.nlm.nih.gov/29997176" } ], "uniprot_canonical_ac": "Q96GN5-1" }, { "start_pos": 21, "end_pos": 21, "sequence_org": "S", "sequence_mut": "D", "comment": "Phosphomimetic mutant. Increased interaction with PSIP1; when associated with D-77, D-79 and D-81.", "evidence": [ { "database": "UniProtKB", "id": "Q96GN5", "url": "https://www.uniprot.org/uniprotkb/Q96GN5" }, { "database": "PubMed", "id": "29997176", "url": "https://pubmed.ncbi.nlm.nih.gov/29997176" } ], "uniprot_canonical_ac": "Q96GN5-1" }, { "start_pos": 72, "end_pos": 72, "sequence_org": "I", "sequence_mut": "A", "comment": "Significant loss of interaction with PSIP1; when associated with A-73. Complete loss of interaction with PSIP1; when associated with A-16, A-17 and A-73.", "evidence": [ { "database": "UniProtKB", "id": "Q96GN5", "url": "https://www.uniprot.org/uniprotkb/Q96GN5" }, { "database": "PubMed", "id": "29997176", "url": "https://pubmed.ncbi.nlm.nih.gov/29997176" } ], "uniprot_canonical_ac": "Q96GN5-1" }, { "start_pos": 73, "end_pos": 73, "sequence_org": "F", "sequence_mut": "A", "comment": "Significant loss of interaction with PSIP1; when associated with A-72. Complete loss of interaction with PSIP1; when associated with A-16, A-17 and A-72.", "evidence": [ { "database": "UniProtKB", "id": "Q96GN5", "url": "https://www.uniprot.org/uniprotkb/Q96GN5" }, { "database": "PubMed", "id": "29997176", "url": "https://pubmed.ncbi.nlm.nih.gov/29997176" } ], "uniprot_canonical_ac": "Q96GN5-1" }, { "start_pos": 77, "end_pos": 77, "sequence_org": "T", "sequence_mut": "D", "comment": "Phosphomimetic mutant. Increased interaction with PSIP1; when associated with D-21, D-79 and D-81.", "evidence": [ { "database": "UniProtKB", "id": "Q96GN5", "url": "https://www.uniprot.org/uniprotkb/Q96GN5" }, { "database": "PubMed", "id": "29997176", "url": "https://pubmed.ncbi.nlm.nih.gov/29997176" } ], "uniprot_canonical_ac": "Q96GN5-1" }, { "start_pos": 79, "end_pos": 79, "sequence_org": "S", "sequence_mut": "D", "comment": "Phosphomimetic mutant. Increased interaction with PSIP1; when associated with D-21, D-77 and D-81.", "evidence": [ { "database": "UniProtKB", "id": "Q96GN5", "url": "https://www.uniprot.org/uniprotkb/Q96GN5" }, { "database": "PubMed", "id": "29997176", "url": "https://pubmed.ncbi.nlm.nih.gov/29997176" } ], "uniprot_canonical_ac": "Q96GN5-1" }, { "start_pos": 81, "end_pos": 81, "sequence_org": "T", "sequence_mut": "D", "comment": "Phosphomimetic mutant. Increased interaction with PSIP1; when associated with D-21, D-77 and D-79.", "evidence": [ { "database": "UniProtKB", "id": "Q96GN5", "url": "https://www.uniprot.org/uniprotkb/Q96GN5" }, { "database": "PubMed", "id": "29997176", "url": "https://pubmed.ncbi.nlm.nih.gov/29997176" } ], "uniprot_canonical_ac": "Q96GN5-1" }, { "start_pos": 132, "end_pos": 132, "sequence_org": "V", "sequence_mut": "A", "comment": "Reduced interaction with PSIP1; when associated with A-133.", "evidence": [ { "database": "UniProtKB", "id": "Q03164", "url": "https://www.uniprot.org/uniprotkb/Q03164" }, { "database": "PubMed", "id": "29997176", "url": "https://pubmed.ncbi.nlm.nih.gov/29997176" } ], "uniprot_canonical_ac": "Q03164-1" }, { "start_pos": 133, "end_pos": 133, "sequence_org": "F", "sequence_mut": "A", "comment": "Reduced interaction with PSIP1; when associated with A-129 or A-132.", "evidence": [ { "database": "UniProtKB", "id": "Q03164", "url": "https://www.uniprot.org/uniprotkb/Q03164" }, { "database": "PubMed", "id": "25082813", "url": "https://pubmed.ncbi.nlm.nih.gov/25082813" }, { "database": "PubMed", "id": "29997176", "url": "https://pubmed.ncbi.nlm.nih.gov/29997176" } ], "uniprot_canonical_ac": "Q03164-1" }, { "start_pos": 136, "end_pos": 136, "sequence_org": "S", "sequence_mut": "D", "comment": "Phosphomimetic mutant. Significant increase in interaction with PSIP1; when associated with D-142.", "evidence": [ { "database": "UniProtKB", "id": "Q03164", "url": "https://www.uniprot.org/uniprotkb/Q03164" }, { "database": "PubMed", "id": "29997176", "url": "https://pubmed.ncbi.nlm.nih.gov/29997176" } ], "uniprot_canonical_ac": "Q03164-1" }, { "start_pos": 142, "end_pos": 142, "sequence_org": "S", "sequence_mut": "D", "comment": "Phosphomimetic mutant. Significant increase in interaction with PSIP1; when associated with D-136.", "evidence": [ { "database": "UniProtKB", "id": "Q03164", "url": "https://www.uniprot.org/uniprotkb/Q03164" }, { "database": "PubMed", "id": "29997176", "url": "https://pubmed.ncbi.nlm.nih.gov/29997176" } ], "uniprot_canonical_ac": "Q03164-1" }, { "start_pos": 1392, "end_pos": 1392, "sequence_org": "S", "sequence_mut": "A", "comment": "Loss of phosphorylation. Loss of interaction with PSIP1; when associated with A-1396.", "evidence": [ { "database": "UniProtKB", "id": "Q7Z3K3", "url": "https://www.uniprot.org/uniprotkb/Q7Z3K3" }, { "database": "PubMed", "id": "29997176", "url": "https://pubmed.ncbi.nlm.nih.gov/29997176" } ], "uniprot_canonical_ac": "Q7Z3K3-1" }, { "start_pos": 1392, "end_pos": 1392, "sequence_org": "S", "sequence_mut": "D", "comment": "Phosphomimetic mutant. Significant increase in interaction with PSIP1; when associated with D-1396.", "evidence": [ { "database": "UniProtKB", "id": "Q7Z3K3", "url": "https://www.uniprot.org/uniprotkb/Q7Z3K3" }, { "database": "PubMed", "id": "29997176", "url": "https://pubmed.ncbi.nlm.nih.gov/29997176" } ], "uniprot_canonical_ac": "Q7Z3K3-1" }, { "start_pos": 1396, "end_pos": 1396, "sequence_org": "S", "sequence_mut": "A", "comment": "Loss of phosphorylation. Loss of interaction with PSIP1; when associated with A-1392.", "evidence": [ { "database": "UniProtKB", "id": "Q7Z3K3", "url": "https://www.uniprot.org/uniprotkb/Q7Z3K3" }, { "database": "PubMed", "id": "29997176", "url": "https://pubmed.ncbi.nlm.nih.gov/29997176" } ], "uniprot_canonical_ac": "Q7Z3K3-1" }, { "start_pos": 1396, "end_pos": 1396, "sequence_org": "S", "sequence_mut": "D", "comment": "Phosphomimetic mutant. 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competitive inhibitors.", "journal": "ACS chemical biology", "date": "2014", "authors": "Dahms SO, Hardes K, Becker GL, Steinmetzer T, Brandstetter H, Than ME", "reference": { "type": "PubMed", "id": "24666235", "url": "https://pubmed.ncbi.nlm.nih.gov/24666235" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P09958-1", "protein_name": "Furin", "gene_name": "FURIN", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P09958", "url": "https://www.uniprot.org/uniprotkb/P09958" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.24666235", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", 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"The BR domain of PsrP interacts with extracellular DNA to promote bacterial aggregation; structural insights into pneumococcal biofilm formation.", "journal": "Scientific reports", "date": "2016-09-01", "authors": "Schulte Tim, Mikaelsson Cecilia, Beaussart Audrey, Kikhney Alexey, Deshmukh Maya, Wolniak Sebastian, Pathak Anuj, Ebel Christine, L\u00f6fling Jonas, Fogolari Federico, Henriques-Normark Birgitta, Dufr\u00eane Yves F, Svergun Dmitri, Nygren Per-\u00c5ke, Achour Adnane", "reference": { "type": "PubMed", "id": "27582320", "url": "https://pubmed.ncbi.nlm.nih.gov/27582320" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P09958-1", "protein_name": "Furin", "gene_name": "FURIN", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P09958", "url": "https://www.uniprot.org/uniprotkb/P09958" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens 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Leunissen J A, Onnekink C, Bloemers H P, Van de Ven W J", "reference": { "type": "PubMed", "id": "3023061", "url": "https://pubmed.ncbi.nlm.nih.gov/3023061" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P09958-1", "protein_name": "Furin", "gene_name": "FURIN", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P09958", "url": "https://www.uniprot.org/uniprotkb/P09958" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.3023061", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 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"count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { 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Evidence for involvement of the homo B domain in autocatalytic activation.", "journal": "The Journal of biological chemistry", "date": "1995", "authors": "Takahashi S, Nakagawa T, Kasai K, Banno T, Duguay SJ, Van de Ven WJ, Murakami K, Nakayama K", "reference": { "type": "PubMed", "id": "7592877", "url": "https://pubmed.ncbi.nlm.nih.gov/7592877" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P09958-1", "protein_name": "Furin", "gene_name": "FURIN", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P09958", "url": "https://www.uniprot.org/uniprotkb/P09958" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.7592877", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": 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transcription through degradation of SMARCC1 of the SWI/SNF complex.", "journal": "Cell reports", "date": "2023-02-28", "authors": "Liu Wei, Wang Ziqiao, Liu Shuo, Zhang Xuan, Cao Xuetao, Jiang Minghong", "reference": { "type": "PubMed", "id": "36800290", "url": "https://pubmed.ncbi.nlm.nih.gov/36800290" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8WVD3-1", "protein_name": "E3 ubiquitin-protein ligase RNF138", "gene_name": "RNF138", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q8WVD3", "url": "https://www.uniprot.org/uniprotkb/Q8WVD3" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.36800290", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", 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between aspirin-intolerant asthma and genetic polymorphisms of FSIP1: a case-case study.", "journal": "BMC pulmonary medicine", "date": "2010", "authors": "Kim JY, Kim JH, Park TJ, Bae JS, Lee JS, Pasaje CF, Park BL, Cheong HS, Park JS, Park SW, Uh ST, Kim MK, Choi IS, Cho SH, Choi BW, Park CS, Shin HD", "reference": { "type": "PubMed", "id": "20513247", "url": "https://pubmed.ncbi.nlm.nih.gov/20513247" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8NA03-1", "protein_name": "Fibrous sheath-interacting protein 1", "gene_name": "FSIP1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q8NA03", "url": "https://www.uniprot.org/uniprotkb/Q8NA03" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.20513247", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": 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