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Genet.", "date": "2009", "authors": "Wang H, den Hollander AI, Moayedi Y, Abulimiti A, Li Y, Collin RW, Hoyng CB, Lopez I, Abboud EB, Al-Rajhi AA, Bray M, Lewis RA, Lupski JR, Mardon G, Koenekoop RK, Chen R", "reference": { "type": "PubMed", "id": "19268277", "url": "https://pubmed.ncbi.nlm.nih.gov/19268277" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q80VP2-1", "protein_name": "Spermatogenesis-associated protein 7 homolog", "gene_name": "Spata7", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9P0W8-1", "protein_name": "Spermatogenesis-associated protein 7", "gene_name": "SPATA7", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q80VP2", "url": "https://www.uniprot.org/uniprotkb/Q80VP2" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.19268277", "abstract": "", "glycosylation": [], 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Reeuwijk Jeroen, Simons David L, Ding Qian, Wu Ka Man, Li Yumei, Van Beersum Sylvia, Moayedi Yalda, Xu Huidan, Pickard Patrick, Wang Keqing, Gan Lin, Wu Samuel M, Williams David S, Mardon Graeme, Roepman Ronald, Chen Rui", "reference": { "type": "PubMed", "id": "25398945", "url": "https://pubmed.ncbi.nlm.nih.gov/25398945" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q80VP2-1", "protein_name": "Spermatogenesis-associated protein 7 homolog", "gene_name": "Spata7", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9P0W8-1", "protein_name": "Spermatogenesis-associated protein 7", "gene_name": "SPATA7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96KN7-1", "protein_name": "X-linked retinitis pigmentosa GTPase regulator-interacting protein 1", "gene_name": "RPGRIP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9EPQ2-1", "protein_name": "X-linked retinitis pigmentosa GTPase regulator-interacting protein 1", "gene_name": "Rpgrip1", "tax_name": 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "SPATA7 maintains a novel photoreceptor-specific zone in the distal connecting cilium.", "journal": "The Journal of cell biology", "date": "2018", "authors": "Dharmat R, Eblimit A, Robichaux MA, Zhang Z, Nguyen TT, Jung SY, He F, Jain A, Li Y, Qin J, Overbeek P, Roepman R, Mardon G, Wensel TG, Chen R", "reference": { "type": "PubMed", "id": "29899041", "url": "https://pubmed.ncbi.nlm.nih.gov/29899041" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q80VP2-1", "protein_name": "Spermatogenesis-associated protein 7 homolog", "gene_name": "Spata7", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8K3E5-1", "protein_name": "Jouberin", "gene_name": "Ahi1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9R0X5-1", "protein_name": "X-linked retinitis pigmentosa GTPase regulator", "gene_name": "Rpgr", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P59240-1", 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Hematol.", "date": "2000", "authors": "Shav-Tal Y, Lee B, Bar-Haim S, Vandekerckhove J, Zipori D", "reference": { "type": "PubMed", "id": "11008015", "url": "https://pubmed.ncbi.nlm.nih.gov/11008015" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8VIJ6-1", "protein_name": "Splicing factor, proline- and glutamine-rich", "gene_name": "Sfpq", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8VIJ6", "url": "https://www.uniprot.org/uniprotkb/Q8VIJ6" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.11008015", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, 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ophthalmology & visual science", "date": "2021", "authors": "Hu X, Li F, He J, Yang J, Jiang Y, Jiang M, Wei D, Chang L, Hejtmancik JF, Hou L, Ma X", "reference": { "type": "PubMed", "id": "34787639", "url": "https://pubmed.ncbi.nlm.nih.gov/34787639" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8VIJ6-1", "protein_name": "Splicing factor, proline- and glutamine-rich", "gene_name": "Sfpq", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8VIJ6", "url": "https://www.uniprot.org/uniprotkb/Q8VIJ6" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.34787639", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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"field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "C14ORF39/SIX6OS1 is a constituent of the synaptonemal complex and is essential for mouse fertility.", "journal": "Nat. Commun.", "date": "2016", "authors": "Gomez-H L, Felipe-Medina N, Sanchez-Martin M, Davies OR, Ramos I, Garcia-Tunon I, de Rooij DG, Dereli I, Toth A, Barbero JL, Benavente R, Llano E, Pendas AM", "reference": { "type": "PubMed", "id": "27796301", "url": "https://pubmed.ncbi.nlm.nih.gov/27796301" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9D495-1", "protein_name": "Synaptonemal complex central element protein 1", "gene_name": "Syce1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9CTN5-1", "protein_name": "Protein SIX6OS1", "gene_name": "4930447C04Rik; Six6os1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9D495", "url": "https://www.uniprot.org/uniprotkb/Q9D495" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.27796301", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Association of dysfunctional synapse defective 1 (SYDE1) with restricted fetal growth - SYDE1 regulates placental cell migration and invasion.", "journal": "J. Pathol.", "date": "2017", "authors": "Lo HF, Tsai CY, Chen CP, Wang LJ, Lee YS, Chen CY, Liang CT, Cheong ML, Chen H", "reference": { "type": "PubMed", "id": "27917469", "url": "https://pubmed.ncbi.nlm.nih.gov/27917469" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9DBZ9-1", "protein_name": "Rho GTPase-activating protein SYDE1", "gene_name": "Syde1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q6ZW31-1", "protein_name": "Rho GTPase-activating protein SYDE1", "gene_name": "SYDE1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP62-1", "protein_name": "Chorion-specific transcription factor GCMa", "gene_name": "GCM1", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9DBZ9", "url": "https://www.uniprot.org/uniprotkb/Q9DBZ9" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.27917469", 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"type": "PubMed", "id": "39152325", "url": "https://pubmed.ncbi.nlm.nih.gov/39152325" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P55821-1", "protein_name": "Stathmin-2", "gene_name": "Stmn2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9NYD6-1", "protein_name": "Homeobox protein Hox-C10", "gene_name": "HOXC10", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P55821", "url": "https://www.uniprot.org/uniprotkb/P55821" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.39152325", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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"count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { 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[Corrected].", "journal": "Journal of the National Cancer Institute", "date": "2014", "authors": "Polato F, Rusconi P, Zangrossi S, Morelli F, Boeri M, Musi A, Marchini S, Castiglioni V, Scanziani E, Torri V, Broggini M", "reference": { "type": "PubMed", "id": "24652652", "url": "https://pubmed.ncbi.nlm.nih.gov/24652652" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8BGE4-1", "protein_name": "Sushi domain-containing protein 6", "gene_name": "Susd6", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q92537-1", "protein_name": "Sushi domain-containing protein 6", "gene_name": "SUSD6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04637-1", "protein_name": "Cellular tumor antigen p53", "gene_name": "TP53", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8BGE4", "url": "https://www.uniprot.org/uniprotkb/Q8BGE4" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.24652652", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Tesk1 interacts with Spry2 to abrogate its inhibition of ERK phosphorylation downstream of receptor tyrosine kinase signaling.", "journal": "J. Biol. Chem.", "date": "2008", "authors": "Chandramouli S, Yu CY, Yusoff P, Lao DH, Leong HF, Mizuno K, Guy GR", "reference": { "type": "PubMed", "id": "17974561", "url": "https://pubmed.ncbi.nlm.nih.gov/17974561" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O70146-1", "protein_name": "Dual specificity testis-specific protein kinase 1", "gene_name": "Tesk1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q924S8-1", "protein_name": "Sprouty-related, EVH1 domain-containing protein 1", "gene_name": "Spred1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9QXV8-1", "protein_name": "Protein sprouty homolog 2", "gene_name": "Spry2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q3C2P8-1", "protein_name": "Sprouty-related, EVH1 domain-containing protein 2", "gene_name": "Spred2", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q63572-1", "protein_name": "Dual specificity testis-specific protein kinase 1", "gene_name": "Tesk1", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q9WTP2-1", "protein_name": "Protein sprouty homolog 4", "gene_name": "Spry4", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q15569-1", "protein_name": "Dual specificity testis-specific protein kinase 1", "gene_name": "TESK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43610-1", "protein_name": "Protein sprouty homolog 3", "gene_name": "SPRY3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q924S7-1", "protein_name": "Sprouty-related, EVH1 domain-containing protein 2", "gene_name": "Spred2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P62993-1", "protein_name": "Growth factor receptor-bound protein 2", "gene_name": "GRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43597-1", "protein_name": "Protein sprouty homolog 2", "gene_name": "SPRY2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22681-1", "protein_name": "E3 ubiquitin-protein ligase CBL", "gene_name": "CBL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30153-1", "protein_name": "Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform", "gene_name": "PPP2R1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P67775-1", "protein_name": "Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform", "gene_name": "PPP2CA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9QXV9-1", "protein_name": "Protein sprouty homolog 1", "gene_name": "Spry1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "O70146", "url": "https://www.uniprot.org/uniprotkb/O70146" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 170, "end_pos": 170, "sequence_org": "D", "sequence_mut": "A", "comment": "Loss of kinase and autophosphorylating activity. Abolishes TESK1-induced actin stress fiber formation. No effect on interaction with YWHAB, SPRY2 or SPRED1. No effect on TESK1-mediated dephosphorylation of SPRY2.", "evidence": [ { "database": "UniProtKB", "id": "Q63572", "url": "https://www.uniprot.org/uniprotkb/Q63572" }, { "database": "PubMed", "id": "10207045", "url": "https://pubmed.ncbi.nlm.nih.gov/10207045" }, { "database": "PubMed", "id": "17974561", "url": "https://pubmed.ncbi.nlm.nih.gov/17974561" }, { "database": "PubMed", "id": "11555644", "url": "https://pubmed.ncbi.nlm.nih.gov/11555644" }, { "database": "PubMed", "id": "18216281", "url": "https://pubmed.ncbi.nlm.nih.gov/18216281" } ], "uniprot_canonical_ac": "Q63572-1" }, { "start_pos": 115, "end_pos": 115, "sequence_org": "S", "sequence_mut": "A", "comment": "Abolishes interaction with GRB2.", "evidence": [ { "database": "UniProtKB", "id": "O43597", "url": "https://www.uniprot.org/uniprotkb/O43597" }, { "database": "PubMed", "id": "17974561", "url": "https://pubmed.ncbi.nlm.nih.gov/17974561" } ], "uniprot_canonical_ac": "O43597-1" } ], "record_id": "pubmed.17974561", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 15 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structural organization and chromosomal localization of the mouse tesk1 (testis-specific protein kinase 1) gene.", "journal": "Gene", "date": "1998", "authors": "Toshima J, Nakagawara K, Mori M, Noda T, Mizuno K", "reference": { "type": "PubMed", "id": "9469938", "url": "https://pubmed.ncbi.nlm.nih.gov/9469938" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O70146-1", "protein_name": "Dual specificity testis-specific protein kinase 1", "gene_name": "Tesk1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "O70146", "url": "https://www.uniprot.org/uniprotkb/O70146" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.9469938", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The murine G+C-rich promoter binding protein mGPBP is required for promoter-specific transcription.", "journal": "Mol. Cell. Biol.", "date": "2003", "authors": "Hsu LC, Liu S, Abedinpour F, Beech RD, Lahti JM, Kidd VJ, Greenspan JA, Yeung CY", "reference": { "type": "PubMed", "id": "14612417", "url": "https://pubmed.ncbi.nlm.nih.gov/14612417" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P62915-1", "protein_name": "Transcription initiation factor IIB", "gene_name": "Gtf2b", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q86WP2-1", "protein_name": "Vasculin", "gene_name": "GPBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6NXH3-1", "protein_name": "Vasculin", "gene_name": "Gpbp1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P29037-1", "protein_name": "TATA-box-binding protein", "gene_name": "Tbp", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R0A0-1", "protein_name": "General transcription factor IIF subunit 2", "gene_name": "Gtf2f2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P62915", "url": "https://www.uniprot.org/uniprotkb/P62915" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.14612417", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Rapid proteasomal degradation of transcription factor IIB in accordance with F9 cell differentiation.", "journal": "Gene", "date": "2009", "authors": "Shiraishi S, Tamamura N, Jogo M, Tanaka Y, Tamura TA", "reference": { "type": "PubMed", "id": "19393171", "url": "https://pubmed.ncbi.nlm.nih.gov/19393171" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P62915-1", "protein_name": "Transcription initiation factor IIB", "gene_name": "Gtf2b", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P62915", "url": "https://www.uniprot.org/uniprotkb/P62915" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.19393171", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], 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Cell Sci.", "date": "2017", "authors": "Liu K, Zhang Y, Liu D, Ying QL, Ye S", "reference": { "type": "PubMed", "id": "28982712", "url": "https://pubmed.ncbi.nlm.nih.gov/28982712" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q3UNW5-1", "protein_name": "Transcription factor CP2-like protein 1", "gene_name": "Tfcp2l1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8K4B0-1", "protein_name": "Metastasis-associated protein MTA1", "gene_name": "Mta1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q3UNW5", "url": "https://www.uniprot.org/uniprotkb/Q3UNW5" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.28982712", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { 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[] } ] }, { "title": "A novel gene essential for the development of single positive thymocytes.", "journal": "Molecular and cellular biology", "date": "2009", "authors": "Kakugawa K, Yasuda T, Miura I, Kobayashi A, Fukiage H, Satoh R, Matsuda M, Koseki H, Wakana S, Kawamoto H, Yoshida H", "reference": { "type": "PubMed", "id": "19620281", "url": "https://pubmed.ncbi.nlm.nih.gov/19620281" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8BGW0-1", "protein_name": "Protein THEMIS", "gene_name": "Themis", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8BGW0", "url": "https://www.uniprot.org/uniprotkb/Q8BGW0" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 512, "end_pos": 512, "sequence_org": "T", "sequence_mut": "P", "comment": "Decreased levels of protein expression in thymocytes. 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Dev.", "date": "2002", "authors": "Engelkamp D", "reference": { "type": "PubMed", "id": "12351186", "url": "https://pubmed.ncbi.nlm.nih.gov/12351186" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8K1S3-1", "protein_name": "Netrin receptor UNC5B", "gene_name": "Unc5b", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8K1S4-1", "protein_name": "Netrin receptor UNC5A", "gene_name": "Unc5a", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8K1S2-1", "protein_name": "Netrin receptor UNC5D", "gene_name": "Unc5d", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8K1S3", "url": "https://www.uniprot.org/uniprotkb/Q8K1S3" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.12351186", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Expression of Netrin-1 and its two receptors DCC and UNC5H2 in the developing mouse lung.", "journal": "Gene Expr. Patterns", "date": "2003", "authors": "Dalvin Sussie, Anselmo Mark A, Prodhan Parthak, Komatsuzaki Katsumi, Schnitzer Jay J, Kinane T Bernard", "reference": { "type": "PubMed", "id": "12799072", "url": "https://pubmed.ncbi.nlm.nih.gov/12799072" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8K1S3-1", "protein_name": "Netrin receptor UNC5B", "gene_name": "Unc5b", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8K1S3", "url": "https://www.uniprot.org/uniprotkb/Q8K1S3" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.12799072", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The netrin receptor UNC5B mediates guidance events controlling morphogenesis of the vascular system.", "journal": "Nature", "date": "2004-11-11", "authors": "Lu Xiaowei, Le Noble Ferdinand, Yuan Li, Jiang Quingjan, De Lafarge Benjamin, Sugiyama Daisuke, Br\u00e9ant Christiane, Claes Filip, De Smet Frederik, Thomas Jean-L\u00e9on, Autiero Monica, Carmeliet Peter, Tessier-Lavigne Marc, Eichmann Anne", "reference": { "type": "PubMed", "id": "15510105", "url": "https://pubmed.ncbi.nlm.nih.gov/15510105" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8K1S3-1", "protein_name": "Netrin receptor UNC5B", "gene_name": "Unc5b", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8K1S3", "url": "https://www.uniprot.org/uniprotkb/Q8K1S3" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.15510105", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", 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}, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structure of the UNC5H2 death domain.", "journal": "Acta Crystallogr. D", "date": "2006", "authors": "Handa Noriko, Kukimoto-Niino Mutsuko, Akasaka Ryogo, Murayama Kazutaka, Terada Takaho, Inoue Makoto, Yabuki Takashi, Aoki Masaaki, Seki Eiko, Matsuda Takayoshi, Nunokawa Emi, Tanaka Akiko, Hayashizaki Yoshihide, Kigawa Takanori, Shirouzu Mikako, Yokoyama Shigeyuki", "reference": { "type": "PubMed", "id": "17139086", "url": "https://pubmed.ncbi.nlm.nih.gov/17139086" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8K1S3-1", "protein_name": "Netrin receptor UNC5B", "gene_name": "Unc5b", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8K1S3", "url": "https://www.uniprot.org/uniprotkb/Q8K1S3" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.17139086", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": 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"field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Unc5B interacts with FLRT3 and Rnd1 to modulate cell adhesion in Xenopus embryos.", "journal": "PLoS ONE", "date": "2009", "authors": "Karaulanov Emil, B\u00f6ttcher Ralph T, Stannek Peter, Wu Wei, Rau Marlene, Ogata Souichi, Cho Ken W Y, Niehrs Christof", "reference": { "type": "PubMed", "id": "19492039", "url": "https://pubmed.ncbi.nlm.nih.gov/19492039" }, 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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"protein_name": "E3 ubiquitin-protein ligase TRIM7", "gene_name": "Trim7", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q99PP9-1", "protein_name": "Tripartite motif-containing protein 16", "gene_name": "Trim16", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q99PQ1-1", "protein_name": "Tripartite motif-containing protein 12A", "gene_name": "Trim12a", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9CYB0-1", "protein_name": "E3 ubiquitin-protein ligase TRIM13", "gene_name": "Trim13", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9WUH5-1", "protein_name": "Tripartite motif-containing protein 10", "gene_name": "Trim10", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9C019-1", "protein_name": "E3 ubiquitin-protein ligase TRIM15", "gene_name": "TRIM15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BZR9-1", "protein_name": "E3 ubiquitin-protein ligase TRIM8", "gene_name": "TRIM8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BYJ4-1", "protein_name": "E3 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Neurochem.", "date": "2001", "authors": "Ohkawa N, Kokura K, Matsu-Ura T, Obinata T, Konishi Y, Tamura TA", "reference": { "type": "PubMed", "id": "11432975", "url": "https://pubmed.ncbi.nlm.nih.gov/11432975" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9ESN6-1", "protein_name": "Tripartite motif-containing protein 2", "gene_name": "Trim2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9ESN6", "url": "https://www.uniprot.org/uniprotkb/Q9ESN6" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.11432975", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] 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Neurochem.", "date": "2010", "authors": "Choi Kyou-Chan, Kim Shin-Hee, Ha Ji-Young, Kim Sang-Tae, Son Jin H", "reference": { "type": "PubMed", "id": "19878437", "url": "https://pubmed.ncbi.nlm.nih.gov/19878437" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8K288-1", "protein_name": "Tumor necrosis factor alpha-induced protein 8-like protein 1", "gene_name": "Tnfaip8l1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8K288", "url": "https://www.uniprot.org/uniprotkb/Q8K288" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.19878437", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The expression of TIPE1 in murine tissues and human cell lines.", "journal": "Mol. Immunol.", "date": "2011", "authors": "Cui J, Zhang G, Hao C, Wang Y, Lou Y, Zhang W, Wang J, Liu S", "reference": { "type": "PubMed", "id": "21600655", "url": "https://pubmed.ncbi.nlm.nih.gov/21600655" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8K288-1", "protein_name": "Tumor necrosis factor alpha-induced protein 8-like protein 1", "gene_name": "Tnfaip8l1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8WVP5-1", "protein_name": "Tumor necrosis factor alpha-induced protein 8-like protein 1", "gene_name": "TNFAIP8L1", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8K288", "url": "https://www.uniprot.org/uniprotkb/Q8K288" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.21600655", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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by Inhibiting TNF-\u03b1-Mediated Inflammation.", "journal": "Journal of immunology (Baltimore, Md. : 1950)", "date": "2023-09-01", "authors": "Lou Yunwei, Jiang Shan, Song Miaomiao, Wang Han, Han Meijuan, Tian Xueqin, Zhao Yuxin, Gao Jingtao, Song Yaru, Ma Shujun, Zhao Peiqing, Zheng Qianqian, Niu Zhiyuan, Zhang Wen, Chang Tingmin, Chen Youhai H, Wang Hui", "reference": { "type": "PubMed", "id": "37459052", "url": "https://pubmed.ncbi.nlm.nih.gov/37459052" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8K288-1", "protein_name": "Tumor necrosis factor alpha-induced protein 8-like protein 1", "gene_name": "Tnfaip8l1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8K288", "url": "https://www.uniprot.org/uniprotkb/Q8K288" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.37459052", "abstract": "", 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Xuetian, Wu Zhuanchang, Li Chunyang, Gao Lifen, Ma Chunhong, Liang Xiaohong", "reference": { "type": "PubMed", "id": "38754745", "url": "https://pubmed.ncbi.nlm.nih.gov/38754745" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8K288-1", "protein_name": "Tumor necrosis factor alpha-induced protein 8-like protein 1", "gene_name": "Tnfaip8l1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8K288", "url": "https://www.uniprot.org/uniprotkb/Q8K288" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.38754745", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, 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"WDFY1, a WD40 repeat protein, is not essential for spermatogenesis and male fertility in mice.", "journal": "Biochemical and biophysical research communications", "date": "2022", "authors": "Lv C, Xiong M, Guo S, Gui Y, Liu X, Wang X, Wu Y, Feng S, Zhang J, Zhang Y, Liu Y, Qin W, Yuan S", "reference": { "type": "PubMed", "id": "35121371", "url": "https://pubmed.ncbi.nlm.nih.gov/35121371" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "E9Q4P1-1", "protein_name": "WD repeat and FYVE domain-containing protein 1", "gene_name": "Wdfy1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "E9Q4P1", "url": "https://www.uniprot.org/uniprotkb/E9Q4P1" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.35121371", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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Cell Sci.", "date": "1999", "authors": "Dumoulin A, Rostaing P, Bedet C, L\u00e9vi S, Isambert M F, Henry J P, Triller A, Gasnier B", "reference": { "type": "PubMed", "id": "10036231", "url": "https://pubmed.ncbi.nlm.nih.gov/10036231" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O35633-1", "protein_name": "Vesicular inhibitory amino acid transporter", "gene_name": "Slc32a1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O35458-1", "protein_name": "Vesicular inhibitory amino acid transporter", "gene_name": "Slc32a1", "tax_name": "Rat" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "O35633", "url": "https://www.uniprot.org/uniprotkb/O35633" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.10036231", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Mouse vesicular GABA transporter gene: genomic organization, transcriptional regulation and chromosomal localization.", "journal": "Brain Res. Mol. Brain Res.", "date": "2003", "authors": "Ebihara S, Obata K, Yanagawa Y", "reference": { "type": "PubMed", "id": "12573541", "url": "https://pubmed.ncbi.nlm.nih.gov/12573541" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O35633-1", "protein_name": "Vesicular inhibitory amino acid transporter", "gene_name": "Slc32a1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "O35633", "url": "https://www.uniprot.org/uniprotkb/O35633" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.12573541", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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amino acid transporter", "gene_name": "Slc32a1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "O35633", "url": "https://www.uniprot.org/uniprotkb/O35633" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.12882924", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A shared vesicular carrier allows synaptic corelease of GABA and glycine.", "journal": "Neuron", "date": "2006-05-18", "authors": "Wojcik Sonja M, Katsurabayashi Shutaro, Guillemin Isabelle, Friauf Eckhard, Rosenmund Christian, Brose Nils, Rhee Jeong-Seop", "reference": { "type": "PubMed", "id": "16701208", "url": "https://pubmed.ncbi.nlm.nih.gov/16701208" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O35633-1", "protein_name": "Vesicular inhibitory amino acid transporter", "gene_name": "Slc32a1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "O35633", "url": "https://www.uniprot.org/uniprotkb/O35633" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.16701208", "abstract": 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