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Biol.", "date": "1994", "authors": "Blacketer M J, Madaule P, Myers A M", "reference": { "type": "PubMed", "id": "8007970", "url": "https://pubmed.ncbi.nlm.nih.gov/8007970" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32895-1", "protein_name": "Ribose-phosphate pyrophosphokinase 1", "gene_name": "PRS1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P32895", "url": "https://www.uniprot.org/uniprotkb/P32895" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.8007970", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "PRS1 is a key member of the gene family encoding phosphoribosylpyrophosphate synthetase in Saccharomyces cerevisiae.", "journal": "Mol. 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Active remodelling of the TIM23 complex during translocation of preproteins into mitochondria.", "journal": "EMBO J.", "date": "2008", "authors": "Popov-Celeketi\u0107 Dusan, Mapa Koyeli, Neupert Walter, Mokranjac Dejana", "reference": { "type": "PubMed", "id": "18418384", "url": "https://pubmed.ncbi.nlm.nih.gov/18418384" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32897-1", "protein_name": "Mitochondrial import inner membrane translocase subunit TIM23", "gene_name": 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The polytopic mitochondrial inner membrane proteins MIM17 and MIM23 operate at the same preprotein import site.", "journal": "FEBS Lett.", "date": "1994", "authors": "K\u00fcbrich M, Keil P, Rassow J, Dekker P J, Blom J, Meijer M, Pfanner N", "reference": { "type": "PubMed", "id": "8050570", "url": "https://pubmed.ncbi.nlm.nih.gov/8050570" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32897-1", "protein_name": "Mitochondrial import inner membrane translocase subunit TIM23", "gene_name": "TIM23", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P39515-1", "protein_name": "Mitochondrial import inner membrane translocase subunit TIM17", "gene_name": "TIM17", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", 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"MAS6 encodes an essential inner membrane component of the yeast mitochondrial protein import pathway.", "journal": "J. Cell Biol.", "date": "1993", "authors": "Emtage J L, Jensen R E", "reference": { "type": "PubMed", "id": "8354690", "url": "https://pubmed.ncbi.nlm.nih.gov/8354690" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32897-1", "protein_name": "Mitochondrial import inner membrane translocase subunit TIM23", "gene_name": "TIM23", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P32897", "url": "https://www.uniprot.org/uniprotkb/P32897" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.8354690", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of MIM23, a putative component of the protein import machinery of the mitochondrial inner membrane.", "journal": "FEBS Lett.", "date": "1993", "authors": "Dekker P J, Keil P, Rassow J, Maarse A C, Pfanner N, Meijer M", "reference": { "type": "PubMed", "id": "8370462", "url": "https://pubmed.ncbi.nlm.nih.gov/8370462" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32897-1", "protein_name": "Mitochondrial import inner membrane translocase subunit TIM23", 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"count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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J. Biochem.", "date": "2004", "authors": "J\u00f8nson Lars, Rehfeld Jens F, Johnsen Anders H", "reference": { "type": "PubMed", "id": "15606766", "url": "https://pubmed.ncbi.nlm.nih.gov/15606766" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32898-1", "protein_name": "Presequence protease, mitochondrial", "gene_name": "CYM1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P32898", "url": "https://www.uniprot.org/uniprotkb/P32898" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.15606766", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", 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Genet.", "date": "1993", "authors": "Harrer R, Schwank S, Sch\u00fcller H J, Schweizer E", "reference": { "type": "PubMed", "id": "8358820", "url": "https://pubmed.ncbi.nlm.nih.gov/8358820" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32899-1", "protein_name": "U3 small nucleolar ribonucleoprotein protein IMP3", "gene_name": "IMP3", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P32900-1", "protein_name": "Protein SKG6", "gene_name": "SKG6", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P32904-1", "protein_name": "Large ribosomal subunit protein uL6m", "gene_name": "MRPL6", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P32899", "url": "https://www.uniprot.org/uniprotkb/P32899" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": 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}, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "SKG1, a suppressor gene of synthetic lethality of kex2Deltagas1Delta mutations, encodes a novel membrane protein that affects cell wall composition.", "journal": "Yeast", "date": "2005", "authors": "Tomishige Nario, Noda Yoichi, Adachi Hiroyuki, Shimoi Hitoshi, Yoda Koji", "reference": { "type": "PubMed", "id": "15645486", "url": "https://pubmed.ncbi.nlm.nih.gov/15645486" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32900-1", "protein_name": "Protein SKG6", "gene_name": "SKG6", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P36169-1", "protein_name": "Suppressor of lethality of KEX2 GAS1 double null mutant protein 1", "gene_name": "SKG1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q06315-1", "protein_name": "Protein SKG3", "gene_name": "SKG3", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P32900", "url": "https://www.uniprot.org/uniprotkb/P32900" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.15645486", "abstract": "", "glycosylation": [], 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Cell. Biol.", "date": "1998", "authors": "Phan L, Zhang X, Asano K, Anderson J, Vornlocher H P, Greenberg J R, Qin J, Hinnebusch A G", "reference": { "type": "PubMed", "id": "9671501", "url": "https://pubmed.ncbi.nlm.nih.gov/9671501" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32911-1", "protein_name": "Eukaryotic translation initiation factor eIF-1", "gene_name": "SUI1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P38431-1", "protein_name": "Eukaryotic translation initiation factor 5", "gene_name": "TIF5", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P06103-1", "protein_name": "Eukaryotic translation initiation factor 3 subunit B", "gene_name": "PRT1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P32497-1", "protein_name": "Eukaryotic translation initiation factor 3 subunit C", "gene_name": "NIP1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P38249-1", "protein_name": "Eukaryotic translation 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F Struct. Biol. 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}, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The Ccz1 protein interacts with Ypt7 GTPase during fusion of multiple transport intermediates with the vacuole in S. cerevisiae.", "journal": "Journal of cell science", "date": "2001-09", "authors": "Kucharczyk R, Kierzek A M, Slonimski P P, Rytka J", "reference": { "type": "PubMed", "id": "11590240", "url": 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Suppresses the zinc, caffeine and calcium sensitivity of CCZ1 mutants.", "evidence": [ { "database": "UniProtKB", "id": "P32939", "url": "https://www.uniprot.org/uniprotkb/P32939" }, { "database": "PubMed", "id": "11590240", "url": "https://pubmed.ncbi.nlm.nih.gov/11590240" } ], "uniprot_canonical_ac": "P32939-1" }, { "start_pos": 129, "end_pos": 129, "sequence_org": "D", "sequence_mut": "G", "comment": "Reduced nucleotide affinity leading to increased turnover between GDP- and GTP-bound states without the need of a guanine nucleotide-exchange factor. 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Suppresses the zinc, caffeine and calcium sensitivity of CCZ1 mutants.", "evidence": [ { "database": "UniProtKB", "id": "P32939", "url": "https://www.uniprot.org/uniprotkb/P32939" }, { "database": "PubMed", "id": "11590240", "url": "https://pubmed.ncbi.nlm.nih.gov/11590240" } ], "uniprot_canonical_ac": "P32939-1" }, { "start_pos": 157, "end_pos": 157, "sequence_org": "T", "sequence_mut": "P", "comment": "Reduced nucleotide affinity leading to increased turnover between GDP- and GTP-bound states without the need of a guanine nucleotide-exchange factor. Suppresses the zinc, caffeine and calcium sensitivity of CCZ1 mutants.", "evidence": [ { "database": "UniProtKB", "id": "P32939", "url": "https://www.uniprot.org/uniprotkb/P32939" }, { "database": "PubMed", "id": "11590240", "url": "https://pubmed.ncbi.nlm.nih.gov/11590240" } ], "uniprot_canonical_ac": "P32939-1" }, { "start_pos": 159, "end_pos": 159, "sequence_org": "A", "sequence_mut": "P", "comment": "Reduced nucleotide affinity leading to increased turnover between GDP- and GTP-bound states without the need of a guanine nucleotide-exchange factor. 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J. Cell Biol.", "date": "2002", "authors": "Lazar Thomas, Scheglmann Dietrich, Gallwitz Dieter", "reference": { "type": "PubMed", "id": "12553664", "url": "https://pubmed.ncbi.nlm.nih.gov/12553664" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32939-1", "protein_name": "Ypt/Rab-type GTPase YPT7", "gene_name": "YPT7", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q04934-1", "protein_name": "Protein IVY1", "gene_name": "IVY1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P20795-1", "protein_name": "Vacuolar protein sorting-associated protein 33", "gene_name": "VPS33", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P32939", "url": "https://www.uniprot.org/uniprotkb/P32939" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": 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"1992", "authors": "Chen MX, Chen YH, Cohen PT", "reference": { "type": "PubMed", "id": "1321058", "url": "https://pubmed.ncbi.nlm.nih.gov/1321058" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32945-1", "protein_name": "Serine/threonine-protein phosphatase PPQ", "gene_name": "PPQ1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P11612-1", "protein_name": "Serine/threonine-protein phosphatase PP-Y", "gene_name": "PpY-55A", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P48456-1", "protein_name": "Serine/threonine-protein phosphatase 2B catalytic subunit 1", "gene_name": "CanA1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P53043-1", "protein_name": "Serine/threonine-protein phosphatase T", "gene_name": "PPT1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P32945", "url": "https://www.uniprot.org/uniprotkb/P32945" } 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phosphatase family with a long serine-rich N-terminal extension.", "journal": "Genetics", "date": "1994", "authors": "Vincent A, Newnam G, Liebman S W", "reference": { "type": "PubMed", "id": "7851758", "url": "https://pubmed.ncbi.nlm.nih.gov/7851758" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32945-1", "protein_name": "Serine/threonine-protein phosphatase PPQ", "gene_name": "PPQ1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P32945", "url": "https://www.uniprot.org/uniprotkb/P32945" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.7851758", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", 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J. 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A conserved ubiquitin ligase of the nuclear envelope/endoplasmic reticulum that functions in both ER-associated and Matalpha2 repressor degradation.", "journal": "Genes & development", "date": "2001-10-15", "authors": "Swanson R, Locher M, Hochstrasser M", "reference": { "type": "PubMed", "id": "11641273", "url": "https://pubmed.ncbi.nlm.nih.gov/11641273" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P33296-1", "protein_name": "Ubiquitin-conjugating enzyme E2 6", 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participate in the in vivo degradation of the yeast MAT alpha 2 repressor.", "journal": "Cell", "date": "1993-07-30", "authors": "Chen P, Johnson P, Sommer T, Jentsch S, Hochstrasser M", "reference": { "type": "PubMed", "id": "8393731", "url": "https://pubmed.ncbi.nlm.nih.gov/8393731" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P33296-1", "protein_name": "Ubiquitin-conjugating enzyme E2 6", "gene_name": "UBC6", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q02159-1", "protein_name": "Ubiquitin-conjugating enzyme E2 7", "gene_name": "UBC7", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P33296", "url": "https://www.uniprot.org/uniprotkb/P33296" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.8393731", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"https://pubmed.ncbi.nlm.nih.gov/8396728" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P33296-1", "protein_name": "Ubiquitin-conjugating enzyme E2 6", "gene_name": "UBC6", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P33296", "url": "https://www.uniprot.org/uniprotkb/P33296" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.8396728", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { 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"table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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"UBC7", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P33296", "url": "https://www.uniprot.org/uniprotkb/P33296" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.9695950", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of a set of yeast genes coding for a novel family of putative ATPases with high similarity to constituents of the 26S protease complex.", "journal": "Yeast", "date": "1994", "authors": "Schnall R, Mannhaupt G, Stucka R, Tauer R, Ehnle S, Schwarzlose C, Vetter I, Feldmann H", "reference": { "type": "PubMed", "id": "7754704", "url": "https://pubmed.ncbi.nlm.nih.gov/7754704" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P33297-1", "protein_name": "26S proteasome regulatory subunit 6A", "gene_name": "RPT5", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P33298-1", "protein_name": "26S proteasome regulatory subunit 6B homolog", "gene_name": "RPT3", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P40014-1", "protein_name": "Kinetochore protein SPC25", "gene_name": "SPC25", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P40325-1", "protein_name": "Proline-rich protein HUA1", "gene_name": "HUA1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P40327-1", "protein_name": "26S proteasome regulatory subunit 4 homolog", "gene_name": "RPT2", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P40323-1", "protein_name": "Uncharacterized protein YPL073C", "gene_name": "", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P40326-1", "protein_name": "Uncharacterized protein YGR269W", "gene_name": "", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P39925-1", "protein_name": "Mitochondrial inner membrane m-AAA protease component YTA10", "gene_name": "AFG3", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P40340-1", "protein_name": "ATPase histone chaperone YTA7", "gene_name": "YTA7", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P40341-1", "protein_name": "Mitochondrial inner membrane m-AAA protease component YTA12", "gene_name": "YTA12", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P40328-1", "protein_name": "Microtubule severing ATPase YTA6", "gene_name": "YTA6", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P32795-1", "protein_name": "Mitochondrial inner membrane i-AAA protease supercomplex subunit YME1", "gene_name": "YME1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P33299-1", "protein_name": "26S proteasome regulatory subunit 7 homolog", "gene_name": "RPT1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P28737-1", "protein_name": "Outer mitochondrial transmembrane helix translocase", "gene_name": "MSP1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P33297", "url": "https://www.uniprot.org/uniprotkb/P33297" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.7754704", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 14 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Mitochondrial morphological and functional defects in yeast caused by yme1 are suppressed by mutation of a 26S protease subunit homologue.", "journal": "Mol. Biol. Cell", "date": "1994", "authors": "Campbell C L, Tanaka N, White K H, Thorsness P E", "reference": { "type": "PubMed", "id": "7803857", "url": "https://pubmed.ncbi.nlm.nih.gov/7803857" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P33298-1", "protein_name": "26S proteasome regulatory subunit 6B homolog", "gene_name": "RPT3", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P33298", "url": "https://www.uniprot.org/uniprotkb/P33298" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.7803857", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", 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"Mannosyl phosphorylinositol ceramide synthase SUR1", "gene_name": "SUR1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P38995-1", "protein_name": "Copper-transporting ATPase", "gene_name": "CCC2", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P33300", "url": "https://www.uniprot.org/uniprotkb/P33300" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.9323360", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "XRS2, a DNA repair gene of Saccharomyces cerevisiae, is needed for meiotic recombination.", "journal": "Genetics", "date": "1992-11", "authors": "Ivanov E L, Korolev V G, Fabre F", "reference": { "type": "PubMed", "id": "1468624", "url": "https://pubmed.ncbi.nlm.nih.gov/1468624" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P33301-1", "protein_name": "DNA repair protein XRS2", "gene_name": "XRS2", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P33301", "url": "https://www.uniprot.org/uniprotkb/P33301" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.1468624", "abstract": "", "glycosylation": [], 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B, Decottignies A, Kolaczkowski M, Carvajal E, Balzi E, Goffeau A", "reference": { "type": "PubMed", "id": "11321575", "url": "https://pubmed.ncbi.nlm.nih.gov/11321575" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P33302-1", "protein_name": "Pleiotropic ABC efflux transporter of multiple drugs", "gene_name": "PDR5", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P33302", "url": "https://www.uniprot.org/uniprotkb/P33302" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.11321575", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", 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