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Cell Sci.", "date": "2002", "authors": "Rodriguez-Pe\u00f1a Jose M, Rodriguez Cristina, Alvarez Alberto, Nombela C\u00e9sar, Arroyo Javier", "reference": { "type": "PubMed", "id": "12045225", "url": "https://pubmed.ncbi.nlm.nih.gov/12045225" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32623-1", "protein_name": "Congo red hypersensitive protein 2", "gene_name": "UTR2", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P38814-1", "protein_name": "Protein SBE22", "gene_name": "SBE22", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P42223-1", "protein_name": "Protein SBE2", "gene_name": "SBE2", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P32623", "url": "https://www.uniprot.org/uniprotkb/P32623" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.12045225", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The gene clusters ARC and COR on chromosomes 5 and 10, respectively, of Saccharomyces cerevisiae share a common ancestry.", "journal": "J. Mol. Biol.", "date": "1993", "authors": "Melnick L, Sherman F", "reference": { "type": "PubMed", "id": "8411151", "url": "https://pubmed.ncbi.nlm.nih.gov/8411151" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32623-1", "protein_name": "Congo red hypersensitive protein 2", "gene_name": "UTR2", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P32626-1", "protein_name": "Enolase-phosphatase E1", "gene_name": "UTR4", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P32629-1", "protein_name": "Mannan polymerase II complex ANP1 subunit", "gene_name": "ANP1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P32630-1", "protein_name": "Protein UTR5", "gene_name": "UTR5", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P00045-1", "protein_name": "Cytochrome c isoform 2", "gene_name": "CYC7", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P32628-1", "protein_name": "UV excision repair protein RAD23", "gene_name": "RAD23", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P32623", "url": "https://www.uniprot.org/uniprotkb/P32623" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.8411151", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Active recycling of yeast Golgi mannosyltransferase complexes through the endoplasmic reticulum.", "journal": "Proc. 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U.S.A.", "date": "2000", "authors": "Todorow Z, Spang A, Carmack E, Yates J, Schekman R", "reference": { "type": "PubMed", "id": "11095735", "url": "https://pubmed.ncbi.nlm.nih.gov/11095735" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32629-1", "protein_name": "Mannan polymerase II complex ANP1 subunit", "gene_name": "ANP1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P23642-1", "protein_name": "Mannan polymerase I complex VAN1 subunit", "gene_name": "VAN1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P39107-1", "protein_name": "Mannan polymerase complexes subunit MNN9", "gene_name": "MNN9", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P32629", "url": "https://www.uniprot.org/uniprotkb/P32629" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C 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substrate of the Saccharomyces cerevisiae trans-aconitate methyltransferase.", "journal": "Biochemistry", "date": "2004-05-25", "authors": "Katz Jonathan E, Dumlao Darren S, Wasserman Jacob I, Lansdown Michael G, Jung Michael E, Faull Kym F, Clarke Steven", "reference": { "type": "PubMed", "id": "15147181", "url": "https://pubmed.ncbi.nlm.nih.gov/15147181" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32643-1", "protein_name": "Trans-aconitate 3-methyltransferase", "gene_name": "TMT1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P32643", "url": "https://www.uniprot.org/uniprotkb/P32643" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.15147181", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], 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Sensitive to papuamide B (phosphatidylserine-binding cytotoxin); the effect is suppressed when associated with S-445.", "evidence": [ { "database": "UniProtKB", "id": "P39524", "url": "https://www.uniprot.org/uniprotkb/P39524" }, { "database": "PubMed", "id": "30824614", "url": "https://pubmed.ncbi.nlm.nih.gov/30824614" }, { "database": "PubMed", "id": "23302692", "url": "https://pubmed.ncbi.nlm.nih.gov/23302692" } ], "uniprot_canonical_ac": "P39524-1" } ], "record_id": "pubmed.30824614", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Conserved mechanism of phospholipid substrate recognition by the P4-ATPase Neo1 from Saccharomyces cerevisiae.", "journal": "Biochimica et biophysica acta. Molecular and cell biology of lipids", "date": "2020", "authors": "Huang Y, Takar M, Best JT, Graham TR", "reference": { "type": "PubMed", "id": "31786280", "url": "https://pubmed.ncbi.nlm.nih.gov/31786280" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32660-1", "protein_name": "Phospholipid-transporting ATPase DNF1", "gene_name": "DNF1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q03687-1", "protein_name": "Scramblase ANY1", "gene_name": "ANY1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P40527-1", "protein_name": "Phospholipid-transporting ATPase NEO1", "gene_name": "NEO1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P32660", "url": "https://www.uniprot.org/uniprotkb/P32660" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "mutagenesis": [ { "start_pos": 243, "end_pos": 243, "sequence_org": "S", "sequence_mut": "Y", "comment": "Increases phosphatidylcholine and phosphatidylserine uptake.", "evidence": [ { "database": "UniProtKB", "id": "P32660", "url": "https://www.uniprot.org/uniprotkb/P32660" }, { "database": "PubMed", "id": "31786280", "url": "https://pubmed.ncbi.nlm.nih.gov/31786280" } ], "uniprot_canonical_ac": "P32660-1" }, { "start_pos": 209, "end_pos": 209, "sequence_org": "Q", "sequence_mut": "G", "comment": "Sensitive to duramycin (phosphatidylethanolamine-binding cytotoxin) and papuamide A (phosphatidylserine-binding cytotoxin). Localization to the Golgi apparatus appears normal.", "evidence": [ { "database": "UniProtKB", "id": "P40527", "url": "https://www.uniprot.org/uniprotkb/P40527" }, { "database": "PubMed", "id": "34645814", "url": "https://pubmed.ncbi.nlm.nih.gov/34645814" }, { "database": "PubMed", "id": "31786280", "url": "https://pubmed.ncbi.nlm.nih.gov/31786280" } ], "uniprot_canonical_ac": "P40527-1" }, { "start_pos": 222, "end_pos": 222, "sequence_org": "Y", "sequence_mut": "A", "comment": "May enhance substrate loading. Decreases cell population growth; when associated with V-228 and D-237.", "evidence": [ { "database": "UniProtKB", "id": "P40527", "url": "https://www.uniprot.org/uniprotkb/P40527" }, { "database": "PubMed", "id": "31786280", "url": "https://pubmed.ncbi.nlm.nih.gov/31786280" } ], "uniprot_canonical_ac": "P40527-1" }, { "start_pos": 222, "end_pos": 222, "sequence_org": "Y", "sequence_mut": "S", "comment": "Does not appear to affect its physical interaction with ANY1. Increases localization to late Golgi compartments. Decreases cell population growth; when associated with V-228 and D-237.", "evidence": [ { "database": "UniProtKB", "id": "P40527", "url": "https://www.uniprot.org/uniprotkb/P40527" }, { "database": "PubMed", "id": "31786280", "url": "https://pubmed.ncbi.nlm.nih.gov/31786280" } ], "uniprot_canonical_ac": "P40527-1" }, { "start_pos": 222, "end_pos": 222, "sequence_org": "Y", "sequence_mut": "S", "comment": "May enhance substrate loading. Decreases cell population growth; when associated with V-228 and D-237.", "evidence": [ { "database": "UniProtKB", "id": "P40527", "url": "https://www.uniprot.org/uniprotkb/P40527" }, { "database": "PubMed", "id": "31786280", "url": "https://pubmed.ncbi.nlm.nih.gov/31786280" } ], "uniprot_canonical_ac": "P40527-1" }, { "start_pos": 228, "end_pos": 228, "sequence_org": "F", "sequence_mut": "V", "comment": "Decreases cell population growth; when associated with S-222 and D-237.", "evidence": [ { "database": "UniProtKB", "id": "P40527", "url": "https://www.uniprot.org/uniprotkb/P40527" }, { "database": "PubMed", "id": "31786280", "url": "https://pubmed.ncbi.nlm.nih.gov/31786280" } ], "uniprot_canonical_ac": "P40527-1" }, { "start_pos": 237, "end_pos": 237, "sequence_org": "E", "sequence_mut": "D", "comment": "Sensitive to duramycin (phosphatidylethanolamine-binding cytotoxin) and papuamide A (phosphatidylserine-binding cytotoxin). Localization to the Golgi apparatus appears normal. Decreases cell population growth; when associated with S-222 and V-228.", "evidence": [ { "database": "UniProtKB", "id": "P40527", "url": "https://www.uniprot.org/uniprotkb/P40527" }, { "database": "PubMed", "id": "34645814", "url": "https://pubmed.ncbi.nlm.nih.gov/34645814" }, { "database": "PubMed", "id": "31786280", "url": "https://pubmed.ncbi.nlm.nih.gov/31786280" } ], "uniprot_canonical_ac": "P40527-1" }, { "start_pos": 452, "end_pos": 452, "sequence_org": "S", "sequence_mut": "A", "comment": "Sensitive to duramycin (phosphatidylethanolamine-binding cytotoxin).", "evidence": [ { "database": "UniProtKB", "id": "P40527", "url": "https://www.uniprot.org/uniprotkb/P40527" }, { "database": "PubMed", "id": "34645814", "url": "https://pubmed.ncbi.nlm.nih.gov/34645814" }, { "database": "PubMed", "id": "31786280", "url": "https://pubmed.ncbi.nlm.nih.gov/31786280" } ], "uniprot_canonical_ac": "P40527-1" }, { "start_pos": 452, "end_pos": 452, "sequence_org": "S", "sequence_mut": "Q", "comment": "Sensitive to duramycin (phosphatidylethanolamine-binding cytotoxin).", "evidence": [ { "database": "UniProtKB", "id": "P40527", "url": "https://www.uniprot.org/uniprotkb/P40527" }, { "database": "PubMed", "id": "34645814", "url": "https://pubmed.ncbi.nlm.nih.gov/34645814" }, { "database": "PubMed", "id": "31786280", "url": "https://pubmed.ncbi.nlm.nih.gov/31786280" } ], "uniprot_canonical_ac": "P40527-1" }, { "start_pos": 452, "end_pos": 452, "sequence_org": "S", "sequence_mut": "Q", "comment": "Sensitive to papuamide A (phosphatidylserine-binding cytotoxin). Localization to the Golgi apparatus appears normal.", "evidence": [ { "database": "UniProtKB", "id": "P40527", "url": "https://www.uniprot.org/uniprotkb/P40527" }, { "database": "PubMed", "id": "34645814", "url": "https://pubmed.ncbi.nlm.nih.gov/34645814" }, { "database": "PubMed", "id": "31786280", "url": "https://pubmed.ncbi.nlm.nih.gov/31786280" } ], "uniprot_canonical_ac": "P40527-1" }, { "start_pos": 457, "end_pos": 457, "sequence_org": "V", "sequence_mut": "A", "comment": "Sensitive to duramycin (phosphatidylethanolamine-binding cytotoxin).", "evidence": [ { "database": "UniProtKB", "id": "P40527", "url": "https://www.uniprot.org/uniprotkb/P40527" }, { "database": "PubMed", "id": "31786280", "url": "https://pubmed.ncbi.nlm.nih.gov/31786280" } ], "uniprot_canonical_ac": "P40527-1" }, { "start_pos": 457, "end_pos": 457, "sequence_org": "V", "sequence_mut": "E", "comment": "Sensitive to duramycin (phosphatidylethanolamine-binding cytotoxin).", "evidence": [ { "database": "UniProtKB", "id": "P40527", "url": "https://www.uniprot.org/uniprotkb/P40527" }, { "database": "PubMed", "id": "31786280", "url": "https://pubmed.ncbi.nlm.nih.gov/31786280" } ], "uniprot_canonical_ac": "P40527-1" }, { "start_pos": 457, "end_pos": 457, "sequence_org": "V", "sequence_mut": "F", "comment": "Sensitive to duramycin (phosphatidylethanolamine-binding cytotoxin).", "evidence": [ { "database": "UniProtKB", "id": "P40527", "url": "https://www.uniprot.org/uniprotkb/P40527" }, { "database": "PubMed", "id": "31786280", "url": "https://pubmed.ncbi.nlm.nih.gov/31786280" } ], "uniprot_canonical_ac": "P40527-1" }, { "start_pos": 503, "end_pos": 503, "sequence_org": "D", "sequence_mut": "N", "comment": "Inviable.", "evidence": [ { "database": "UniProtKB", "id": "P40527", "url": "https://www.uniprot.org/uniprotkb/P40527" }, { "database": "PubMed", "id": "31786280", "url": "https://pubmed.ncbi.nlm.nih.gov/31786280" }, { "database": "PubMed", "id": "27235400", "url": 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"total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Exofacial membrane composition and lipid metabolism regulates plasma membrane P4-ATPase substrate specificity.", "journal": "The Journal of biological chemistry", "date": "2020-12-25", "authors": "Jain Bhawik Kumar, Roland Bartholomew P, Graham Todd R", "reference": { "type": "PubMed", "id": "33060204", "url": "https://pubmed.ncbi.nlm.nih.gov/33060204" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32660-1", "protein_name": "Phospholipid-transporting ATPase DNF1", "gene_name": "DNF1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q12675-1", "protein_name": "Phospholipid-transporting ATPase DNF2", "gene_name": "DNF2", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P25341-1", "protein_name": "Serine/threonine-protein kinase KIN82", "gene_name": "KIN82", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P53739-1", "protein_name": "Flippase kinase 1", "gene_name": "FPK1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P32660", "url": "https://www.uniprot.org/uniprotkb/P32660" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "mutagenesis": [ { "start_pos": 1566, "end_pos": 1566, "sequence_org": "S", "sequence_mut": "A", "comment": "Loss of activity; when associated with A-386; A-396; A-403 and A-1592.", "evidence": [ { "database": "UniProtKB", "id": "Q12675", "url": "https://www.uniprot.org/uniprotkb/Q12675" }, { "database": "PubMed", "id": "33060204", "url": "https://pubmed.ncbi.nlm.nih.gov/33060204" } ], "uniprot_canonical_ac": "Q12675-1" }, { "start_pos": 1566, "end_pos": 1566, "sequence_org": "S", "sequence_mut": "D", "comment": "No apparent gain of activity; when associated with D-386; D-396; D-403 and D-1592.", "evidence": [ { "database": "UniProtKB", "id": "Q12675", "url": "https://www.uniprot.org/uniprotkb/Q12675" }, { "database": "PubMed", "id": "33060204", "url": "https://pubmed.ncbi.nlm.nih.gov/33060204" } ], "uniprot_canonical_ac": "Q12675-1" }, { "start_pos": 1592, "end_pos": 1592, "sequence_org": "S", "sequence_mut": "A", "comment": "Loss of activity; when associated with A-386; A-396; A-403 and A-1566.", "evidence": [ { "database": "UniProtKB", "id": "Q12675", "url": "https://www.uniprot.org/uniprotkb/Q12675" }, { "database": "PubMed", "id": "33060204", "url": "https://pubmed.ncbi.nlm.nih.gov/33060204" } ], "uniprot_canonical_ac": "Q12675-1" }, { "start_pos": 1592, "end_pos": 1592, "sequence_org": "S", "sequence_mut": "D", "comment": "No apparent gain of activity; when associated with D-386; D-396; D-403 and D-1566.", "evidence": [ { "database": "UniProtKB", "id": "Q12675", "url": "https://www.uniprot.org/uniprotkb/Q12675" }, { "database": "PubMed", "id": "33060204", "url": "https://pubmed.ncbi.nlm.nih.gov/33060204" } ], "uniprot_canonical_ac": "Q12675-1" }, { "start_pos": 258, "end_pos": 258, "sequence_org": "N", "sequence_mut": "S", "comment": "Decreases glucosylceramide and phosphatidylcholine import into cells.", "evidence": [ { "database": "UniProtKB", "id": "Q12675", "url": "https://www.uniprot.org/uniprotkb/Q12675" }, { "database": "PubMed", "id": "33060204", "url": "https://pubmed.ncbi.nlm.nih.gov/33060204" } ], "uniprot_canonical_ac": "Q12675-1" }, { "start_pos": 386, "end_pos": 386, "sequence_org": "S", "sequence_mut": "A", "comment": "Loss of activity; when associated with A-396; A-403; A-1566 and A-1592.", "evidence": [ { "database": "UniProtKB", "id": "Q12675", "url": "https://www.uniprot.org/uniprotkb/Q12675" }, { "database": "PubMed", "id": "33060204", "url": "https://pubmed.ncbi.nlm.nih.gov/33060204" } ], "uniprot_canonical_ac": "Q12675-1" }, { "start_pos": 386, "end_pos": 386, "sequence_org": "S", "sequence_mut": "D", "comment": "No apparent gain of activity; when associated with D-396; D-403; D-1566 and D-1592.", "evidence": [ { "database": "UniProtKB", "id": "Q12675", "url": "https://www.uniprot.org/uniprotkb/Q12675" }, { "database": 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Microbiol. Biotechnol.", "date": "2003", "authors": "Verstrepen K J, Derdelinckx G, Verachtert H, Delvaux F R", "reference": { "type": "PubMed", "id": "12698276", "url": "https://pubmed.ncbi.nlm.nih.gov/12698276" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32768-1", "protein_name": "Flocculation protein FLO1", "gene_name": "FLO1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P38894-1", "protein_name": "Flocculation protein FLO5", "gene_name": "FLO5", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P32768", "url": "https://www.uniprot.org/uniprotkb/P32768" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.12698276", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { 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Bacteriol.", "date": "1997", "authors": "Bony M, Thines-Sempoux D, Barre P, Blondin B", "reference": { "type": "PubMed", "id": "9244284", "url": "https://pubmed.ncbi.nlm.nih.gov/9244284" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32768-1", "protein_name": "Flocculation protein FLO1", "gene_name": "FLO1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P32768", "url": "https://www.uniprot.org/uniprotkb/P32768" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.9244284", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", 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Biol.", "date": "2011", "authors": "Becker Thomas, Armache Jean-Paul, Jarasch Alexander, Anger Andreas M, Villa Elizabeth, Sieber Heidemarie, Motaal Basma Abdel, Mielke Thorsten, Berninghausen Otto, Beckmann Roland", "reference": { "type": "PubMed", "id": "21623367", "url": "https://pubmed.ncbi.nlm.nih.gov/21623367" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32769-1", "protein_name": "Elongation factor 1 alpha-like protein", "gene_name": "HBS1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P33309-1", "protein_name": "Protein DOM34", "gene_name": "DOM34", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P32769", "url": "https://www.uniprot.org/uniprotkb/P32769" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.21623367", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structural insights into ribosomal rescue by Dom34 and Hbs1 at near-atomic resolution.", "journal": "Nat. Commun.", "date": "2016", "authors": "Hilal Tarek, Yamamoto Hiroshi, Loerke Justus, B\u00fcrger J\u00f6rg, Mielke Thorsten, Spahn Christian M T", "reference": { "type": "PubMed", "id": "27995908", "url": "https://pubmed.ncbi.nlm.nih.gov/27995908" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32769-1", "protein_name": "Elongation factor 1 alpha-like protein", "gene_name": "HBS1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P33309-1", "protein_name": "Protein DOM34", "gene_name": "DOM34", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P32769", "url": "https://www.uniprot.org/uniprotkb/P32769" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.27995908", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Mutational analysis of the Saccharomyces 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "The sequence of an 8 kb segment on the left arm of chromosome II from Saccharomyces cerevisiae identifies five new open reading frames of unknown functions, two tRNA genes and two transposable elements.", "journal": "Yeast", "date": "1992", "authors": "Skala J, Van Dyck L, Purnelle B, Goffeau A", "reference": { "type": "PubMed", "id": "1332308", "url": "https://pubmed.ncbi.nlm.nih.gov/1332308" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32784-1", "protein_name": "Glycerol-3-phosphate O-acyltransferase 1", "gene_name": "SCT1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P32786-1", "protein_name": "RNA polymerase I-specific transcription initiation factor RRN6", "gene_name": "RRN6", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P32785-1", "protein_name": "Methionyl-tRNA formyltransferase, mitochondrial", "gene_name": "FMT1", "tax_name": "Baker's yeast" } ], "species": [ { 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Biochem.", "date": "1995", "authors": "Matsushita M, Nikawa J", "reference": { "type": "PubMed", "id": "7608137", "url": "https://pubmed.ncbi.nlm.nih.gov/7608137" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32784-1", "protein_name": "Glycerol-3-phosphate O-acyltransferase 1", "gene_name": "SCT1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P32784", "url": "https://www.uniprot.org/uniprotkb/P32784" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.7608137", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", 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Use of the cDNA in gene disruption studies.", "journal": "The Journal of biological chemistry", "date": "1993-01-25", "authors": "Kispal G, Sumegi B, Dietmeier K, Bock I, Gajdos G, Tomcsanyi T, Sandor A", "reference": { "type": "PubMed", "id": "8420957", "url": "https://pubmed.ncbi.nlm.nih.gov/8420957" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32796-1", "protein_name": "Carnitine O-acetyltransferase, mitochondrial", "gene_name": "CAT2", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P32796", "url": "https://www.uniprot.org/uniprotkb/P32796" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.8420957", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Induction of the ZRC1 metal tolerance gene in zinc-limited yeast confers resistance to zinc shock.", "journal": "The Journal of biological chemistry", "date": "2003-04-25", "authors": "MacDiarmid Colin W, Milanick Mark A, Eide David J", "reference": { "type": "PubMed", "id": "12556516", "url": "https://pubmed.ncbi.nlm.nih.gov/12556516" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32798-1", "protein_name": "Vacuolar zinc transporter COT1", "gene_name": "COT1", 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