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Cell", "date": "2021", "authors": "Peloggia Julia, M\u00fcnch Daniela, Meneses-Giles Paloma, Romero-Carvajal Andr\u00e9s, Lush Mark E, Lawson Nathan D, McClain Melainia, Pan Y Albert, Piotrowski Tatjana", "reference": { "type": "PubMed", "id": "33878346", "url": "https://pubmed.ncbi.nlm.nih.gov/33878346" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q1L963-1", "protein_name": "Solute carrier family 12 member 10, tandem duplicate 2", "gene_name": "slc12a10.2", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q1L963", "url": "https://www.uniprot.org/uniprotkb/Q1L963" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.33878346", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of seven genes in the major histocompatibility complex class I region of the zebrafish.", "journal": "Scand. J. Immunol.", "date": "2000", "authors": "S\u00fcltmann H, Murray B W, Klein J", "reference": { "type": "PubMed", "id": "10849368", "url": "https://pubmed.ncbi.nlm.nih.gov/10849368" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q1LUU7-1", "protein_name": "Kinesin-like protein", "gene_name": "kifc1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q1LUU3-1", "protein_name": "TAP binding protein (Tapasin), tandem duplicate 1 precursor", "gene_name": "tapbp.1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q1LUU5-1", "protein_name": "Zinc finger and BTB domain-containing protein 22b", "gene_name": "zbtb22b", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AC58HYH8-1", "protein_name": "Death domain-associated protein 6", "gene_name": "daxx", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q1LUU7", "url": "https://www.uniprot.org/uniprotkb/Q1LUU7" } ], 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Genomics", "date": "2009", "authors": "Ng Yen Kaow, Wu Wei, Zhang Louxin", "reference": { "type": "PubMed", "id": "19159490", "url": "https://pubmed.ncbi.nlm.nih.gov/19159490" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q1LUU7-1", "protein_name": "Kinesin-like protein", "gene_name": "kifc1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5IHX7-1", "protein_name": "Prostaglandin E synthase", "gene_name": "ptges", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5RIK6-1", "protein_name": "Protein sel-1 homolog 1", "gene_name": "sel1l", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9I8Z0-1", "protein_name": "Odorant receptor 111-8", "gene_name": "or42e2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9I8Z5-1", "protein_name": "Olfactory receptor", "gene_name": "or30bx1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9PWL7-1", "protein_name": "Homeobox protein Hox-B10a", "gene_name": "hoxb10a", "tax_name": 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KIFC1-like kinesin gene (es-KIFC1) in the testis of the Chinese mitten crab Eriocheir sinensis.", "journal": "Comp. Biochem. Physiol., Part A Mol. Integr. Physiol.", "date": "2010", "authors": "Wang Da-Hui, Yang Wan-Xi", "reference": { "type": "PubMed", "id": "20554056", "url": "https://pubmed.ncbi.nlm.nih.gov/20554056" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q1LUU7-1", "protein_name": "Kinesin-like protein", "gene_name": "kifc1", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q1LUU7", "url": "https://www.uniprot.org/uniprotkb/Q1LUU7" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.20554056", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Translation initiation factor eIF3h targets specific transcripts to polysomes during embryogenesis.", "journal": "Proc. Natl. Acad. Sci. U.S.A.", "date": "2013", "authors": "Choudhuri Avik, Maitra Umadas, Evans Todd", "reference": { "type": "PubMed", "id": "23716667", "url": "https://pubmed.ncbi.nlm.nih.gov/23716667" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q1LUU7-1", "protein_name": "Kinesin-like protein", "gene_name": "kifc1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q6AXJ2-1", "protein_name": "Eukaryotic translation initiation factor 3 subunit H-A", "gene_name": "eif3ha", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "B0S6N1-1", "protein_name": "Crystallin, gamma M2d21", "gene_name": "crygm2d21", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "B0S6P0-1", "protein_name": "Crystallin, gamma M2d9", "gene_name": "crygm2d9", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q7SZZ6-1", "protein_name": "Actinodin3 precursor", "gene_name": "and3", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M1N008-1", "protein_name": "Crystallin, gamma M2d18", "gene_name": "crygm2d18", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M1N9H1-1", "protein_name": "Crystallin, gamma M2d2", "gene_name": "crygm2d2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "B0S6M3-1", "protein_name": "Crystallin, gamma M2d1", "gene_name": "crygm2d1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1R6I1-1", "protein_name": "Cytochrome c oxidase subunit 4", "gene_name": "cox4i1l", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q1LUU7", "url": "https://www.uniprot.org/uniprotkb/Q1LUU7" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.23716667", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 9 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The C-terminal kinesin motor KIFC1 may participate in nuclear reshaping and flagellum formation during spermiogenesis of Larimichthys crocea.", "journal": "Fish Physiol. Biochem.", "date": "2017", "authors": "Zhang Dan-Dan, Gao Xin-Ming, Zhao Yong-Qiang, Hou Cong-Cong, Zhu Jun-Quan", "reference": { "type": "PubMed", "id": "28534180", "url": "https://pubmed.ncbi.nlm.nih.gov/28534180" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q1LUU7-1", "protein_name": "Kinesin-like protein", "gene_name": "kifc1", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q1LUU7", "url": "https://www.uniprot.org/uniprotkb/Q1LUU7" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.28534180", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, 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"gene_name": "cep131", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M2BKJ6-1", "protein_name": "Septin", "gene_name": "septin6", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "B8A6E8-1", "protein_name": "Leucine zipper putative tumor suppressor 2 homolog", "gene_name": "lzts2a", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M1NZC4-1", "protein_name": "Septin", "gene_name": "septin7b", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A9C3Q1-1", "protein_name": "Macrophage-expressed gene 1 protein", "gene_name": "mpeg1.2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q1RM55-1", "protein_name": "PIH1 domain-containing protein 1", "gene_name": "pih1d1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "F2Z4U5-1", "protein_name": "Cell cycle checkpoint control protein", "gene_name": "rad9a", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q1LUM9-1", "protein_name": "Dynein light intermediate chain", "gene_name": "dync1li1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1RCR6-1", "protein_name": "E3 ubiquitin-protein ligase TRIP12", "gene_name": "trip12", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M1NGN8-1", "protein_name": "Kinesin-like protein", "gene_name": "kif5c", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q1LUU7", "url": "https://www.uniprot.org/uniprotkb/Q1LUU7" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.35929537", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 16 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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waveform control in zebrafish sperm.", "journal": "Life science alliance", "date": "2024-09", "authors": "Morikawa Motohiro, Yamaguchi Hiroshi, Kikkawa Masahide", "reference": { "type": "PubMed", "id": "38876797", "url": "https://pubmed.ncbi.nlm.nih.gov/38876797" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q1LWZ0-1", "protein_name": "Calaxin", "gene_name": "clxn", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q1LWZ0", "url": "https://www.uniprot.org/uniprotkb/Q1LWZ0" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.38876797", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", 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Biol.", "date": "2005", "authors": "Yergeau Donald A, Cornell Catharine N, Parker Sandra K, Zhou Yi, Detrich H William", "reference": { "type": "PubMed", "id": "15890331", "url": "https://pubmed.ncbi.nlm.nih.gov/15890331" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q1LXI7-1", "protein_name": "Krueppel-like factor 2a", "gene_name": "klf2a", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q1LXI7", "url": "https://www.uniprot.org/uniprotkb/Q1LXI7" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.15890331", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Attributing effects of aqueous C60 nano-aggregates to tetrahydrofuran decomposition products in larval zebrafish by assessment of gene expression.", "journal": "Environ. Health Perspect.", "date": "2007", "authors": "Henry Theodore B, Menn Fu-Min, Fleming James T, Wilgus John, Compton Robert N, Sayler Gary S", "reference": { "type": "PubMed", "id": "17637923", "url": "https://pubmed.ncbi.nlm.nih.gov/17637923" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q1LXI7-1", "protein_name": "Krueppel-like factor 2a", "gene_name": "klf2a", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A2AWE1-1", "protein_name": "Peroxiredoxin-1", "gene_name": "prdx1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7F981-1", "protein_name": "Nuclear pore complex protein Nup98-Nup96", "gene_name": "nup98", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A2BEG3-1", "protein_name": "Microprocessor complex subunit DGCR8", "gene_name": "dgcr8", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q1LXI7", "url": "https://www.uniprot.org/uniprotkb/Q1LXI7" 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Med.", "date": "2024", "authors": "Pham Van-Cuong, R\u00f6del Claudia Jasmin, Valentino Mariaelena, Malinverno Matteo, Paolini Alessio, M\u00fcnch Juliane, Pasquier Candice, Onyeogaziri Favour C, Lazovic Bojana, Girard Romuald, Koskim\u00e4ki Janne, Hu\u00dfmann Melina, Keith Benjamin, Jachimowicz Daniel, Kohl Franziska, Hagelkruys Astrid, Penninger Josef M, Schulte-Merker Stefan, Awad Issam A, Hicks Ryan, Magnusson Peetra U, Faurobert Eva, Pagani Massimiliano, Abdelilah-Seyfried Salim", "reference": { "type": "PubMed", "id": "39402138", "url": "https://pubmed.ncbi.nlm.nih.gov/39402138" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q1LXI7-1", "protein_name": "Krueppel-like factor 2a", "gene_name": "klf2a", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1REV3-1", "protein_name": "Krev interaction trapped protein 1", "gene_name": "krit1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "O73792-1", "protein_name": "Tyrosine-protein kinase receptor Tie-1", "gene_name": "tie1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M1N5K1-1", "protein_name": "Chromobox homolog 7a", "gene_name": "cbx7a", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q1LXI7", "url": "https://www.uniprot.org/uniprotkb/Q1LXI7" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.39402138", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Expression of two novel zebrafish iroquois homologues (ziro1 and ziro5) during early development of axial structures and central nervous system.", "journal": "Mech. Dev.", "date": "2001", "authors": "Wang X, Emelyanov A, Sleptsova-Friedrich I, Korzh V, Gong Z", "reference": { "type": "PubMed", "id": "11429297", "url": "https://pubmed.ncbi.nlm.nih.gov/11429297" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q1LXU5-1", "protein_name": "Iroquois homeobox protein 5a", "gene_name": "irx5a", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M1P7R5-1", "protein_name": "Phosphatidylcholine-sterol acyltransferase", "gene_name": "lcat", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q1LXU5", "url": "https://www.uniprot.org/uniprotkb/Q1LXU5" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.11429297", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Comparison of Iroquois gene expression in limbs/fins of vertebrate embryos.", "journal": "J. Anat.", "date": "2010", "authors": "McDonald Laura A, Gerrelli Dianne, Fok Yvonne, Hurst Laurence D, Tickle Cheryll", "reference": { "type": "PubMed", "id": "20408909", "url": "https://pubmed.ncbi.nlm.nih.gov/20408909" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q1LXU5-1", "protein_name": "Iroquois homeobox protein 5a", "gene_name": "irx5a", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q1LWG1-1", "protein_name": "Iroquois-class homeodomain protein IRX-4b", "gene_name": "irx4b", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q1LXU5", "url": "https://www.uniprot.org/uniprotkb/Q1LXU5" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.20408909", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Evolution of melanopsin photoreceptors: discovery and characterization of a new melanopsin in nonmammalian vertebrates.", "journal": "PLoS Biol.", "date": "2006", "authors": "Bellingham James, Chaurasia Shyam S, Melyan Zara, Liu Cuimei, Cameron Morven A, Tarttelin Emma E, Iuvone P Michael, Hankins Mark W, Tosini Gianluca, Lucas Robert J", "reference": { "type": "PubMed", "id": "16856781", "url": "https://pubmed.ncbi.nlm.nih.gov/16856781" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q2KNE5-1", "protein_name": "Melanopsin-A", "gene_name": "opn4a", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q2KNE5", "url": "https://www.uniprot.org/uniprotkb/Q2KNE5" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", 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Joseph, Nickle Benjamin, Robinson Phyllis R, Hattar Samer, Halpern Marnie E", "reference": { "type": "PubMed", "id": "21966429", "url": "https://pubmed.ncbi.nlm.nih.gov/21966429" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q2KNE5-1", "protein_name": "Melanopsin-A", "gene_name": "opn4a", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4IN44-1", "protein_name": "PDZ and LIM domain protein 5a", "gene_name": "pdlim5a", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q2KNE5", "url": "https://www.uniprot.org/uniprotkb/Q2KNE5" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.21966429", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", 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Patterns", "date": "2009", "authors": "Toro Sabrina, Wegner Jeremy, Muller Marc, Westerfield Monte, Varga Zoltan M", "reference": { "type": "PubMed", "id": "19166982", "url": "https://pubmed.ncbi.nlm.nih.gov/19166982" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q6ZM67-1", "protein_name": "Glutamate receptor", "gene_name": "grin1b", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8N7UZX7-1", "protein_name": "Amino acid transporter", "gene_name": "slc1a2b", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M9P097-1", "protein_name": "Monocarboxylate transporter 9", "gene_name": "slc16a9a", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "F6NQC4-1", "protein_name": "Neurogranin (Protein kinase C substrate, RC3) a", "gene_name": "nrgna", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AB32T1C5-1", "protein_name": "3.2.2.6; X-linked interleukin-1 receptor accessory protein-like 2", "gene_name": "il1rapl2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "B7TWP7-1", "protein_name": "Proline-rich nuclear receptor coactivator 2", "gene_name": "pnrc2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "B8A492-1", "protein_name": "Interferon alpha inducible protein 27.4", "gene_name": "ifi27.4", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1QCH5-1", "protein_name": "Proprotein convertase subtilisin/kexin type 1 inhibitor, like precursor", "gene_name": "pcsk1nl", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1RA32-1", "protein_name": "Ependymin-like 1 precursor", "gene_name": "epdl1", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q6ZM67", "url": "https://www.uniprot.org/uniprotkb/Q6ZM67" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.19166982", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 9 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Cdkl5 mutant zebrafish shows skeletal and neuronal alterations mimicking human CDKL5 deficiency disorder.", "journal": "Sci. Rep.", "date": "2022", "authors": "Varela Tatiana, Varela D\u00e9bora, Martins Gil, Concei\u00e7\u00e3o Nat\u00e9rcia, Cancela M Leonor", "reference": { "type": "PubMed", "id": "35665761", "url": "https://pubmed.ncbi.nlm.nih.gov/35665761" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q6ZM67-1", "protein_name": "Glutamate receptor", "gene_name": "grin1b", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4IU63-1", "protein_name": "Metabotropic glutamate receptor 5", "gene_name": "grm1b", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q6ZM67", "url": "https://www.uniprot.org/uniprotkb/Q6ZM67" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.35665761", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Disruption of grin2B, an ASD-associated gene, produces social deficits in zebrafish.", "journal": "Mol. Autism", "date": "2022", "authors": "Zoodsma Josiah D, Keegan Emma J, Moody Gabrielle R, Bhandiwad Ashwin A, Napoli Amalia J, Burgess Harold A, Wollmuth Lonnie P, Sirotkin Howard I", "reference": { "type": "PubMed", "id": "36138431", "url": "https://pubmed.ncbi.nlm.nih.gov/36138431" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q6ZM67-1", "protein_name": "Glutamate receptor", "gene_name": "grin1b", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M1NH89-1", "protein_name": "Glutamate receptor", "gene_name": "grin2bb", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q6ZM67", "url": "https://www.uniprot.org/uniprotkb/Q6ZM67" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.36138431", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Transcriptional and Biochemical Alterations in Zebrafish Eleuthero-Embryos (Danio rerio) After Exposure to Synthetic Progestogen Dydrogesterone.", "journal": "Bull. Environ. Contam. Toxicol.", "date": "2017", "authors": "Shi Wen-Jun, Ying Guang-Guo, Huang Guo-Yong, Liang Yan-Qiu, Hu Li-Xin, Zhao Jian-Liang, Zhang Jin-Na", "reference": { "type": "PubMed", "id": "28214940", "url": "https://pubmed.ncbi.nlm.nih.gov/28214940" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A8M9QC34-1", "protein_name": "adenylate cyclase", "gene_name": "adcy7", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0A8M9QC34", "url": "https://www.uniprot.org/uniprotkb/A0A8M9QC34" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.28214940", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Dydrogesterone affects the transcription of genes in GnRH and steroidogenesis pathways and increases the frequency of atretic follicles in zebrafish (Danio rerio).", "journal": "Chemosphere", "date": "2019", "authors": "Shi Wen-Jun, Hu Li-Xin, Huang Guo-Yong, Liu You-Sheng, Zhang Jin-Na, Xie Lingtian, Ying Guang-Guo", "reference": { "type": "PubMed", "id": "30391894", "url": "https://pubmed.ncbi.nlm.nih.gov/30391894" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A8M9QC34-1", "protein_name": "adenylate cyclase", "gene_name": "adcy7", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0A8M9QC34", "url": "https://www.uniprot.org/uniprotkb/A0A8M9QC34" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.30391894", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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Cell. Endocrinol.", "date": "2013", "authors": "Wong Marty Kwok-Shing, Takei Yoshio", "reference": { "type": "PubMed", "id": "23174758", "url": "https://pubmed.ncbi.nlm.nih.gov/23174758" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A8M9QB25-1", "protein_name": "Rho guanine nucleotide exchange factor 9", "gene_name": "arhgef9b", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A2BGK3-1", "protein_name": "SH2 domain containing 1A duplicate a", "gene_name": "sh2d1aa", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0A8M9QB25", "url": "https://www.uniprot.org/uniprotkb/A0A8M9QB25" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.23174758", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Reverse genetic screening reveals poor correlation between morpholino-induced and mutant phenotypes in zebrafish.", "journal": "Dev. 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Neurobiol.", "date": "2005", "authors": "Meyer Martin P, Trimmer James S, Gilthorpe Jonathan D, Smith Stephen J", "reference": { "type": "PubMed", "id": "15660367", "url": "https://pubmed.ncbi.nlm.nih.gov/15660367" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q5PYH5-1", "protein_name": "Discs large homolog 1-like protein", "gene_name": "dlg1b; dlg1l", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5PYH7-1", "protein_name": "Disks large homolog 2", "gene_name": "dlg2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q6R005-1", "protein_name": "Disks large homolog 4", "gene_name": "dlg4", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5PYH6-1", "protein_name": "Disks large homolog 1", "gene_name": "dlg1a; dlg1", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q5PYH5", "url": "https://www.uniprot.org/uniprotkb/Q5PYH5" } ], "common_name": "Zebrafish", 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JB, Mortensen N, Li JL, Patient R, Sood AK, Banham AH, Harris AL, Buffa FM", "reference": { "type": "PubMed", "id": "23871637", "url": "https://pubmed.ncbi.nlm.nih.gov/23871637" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q7SY09-1", "protein_name": "Adhesion G protein-coupled receptor L4", "gene_name": "adgrl4", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q923X1-1", "protein_name": "Adhesion G protein-coupled receptor L4", "gene_name": "Adgrl4", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9HBW9-1", "protein_name": "Adhesion G protein-coupled receptor L4", "gene_name": "ADGRL4", "tax_name": "Human" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q7SY09", "url": "https://www.uniprot.org/uniprotkb/Q7SY09" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.23871637", "abstract": "", "glycosylation": [], 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zebrafish.", "journal": "BMC Genomics", "date": "2015", "authors": "Harty Breanne L, Krishnan Arunkumar, Sanchez Nicholas E, Schi\u00f6th Helgi B, Monk Kelly R", "reference": { "type": "PubMed", "id": "25715737", "url": "https://pubmed.ncbi.nlm.nih.gov/25715737" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q7SY09-1", "protein_name": "Adhesion G protein-coupled receptor L4", "gene_name": "adgrl4", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q6JAN0-1", "protein_name": "Adhesion G protein-coupled receptor V1", "gene_name": "adgrv1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "S4X0Q8-1", "protein_name": "Adhesion G protein-coupled receptor A3", "gene_name": "adgra3", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AC58GDD5-1", "protein_name": "Adhesion G protein-coupled receptor L2b.1 isoform X1", "gene_name": "adgrl2b.1", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { 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"Multiple vitellogenins in zebrafish (Danio rerio): quantitative inventory of genes, transcripts and proteins, and relation to egg quality.", "journal": "Fish Physiol. 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Commun.", "date": "2018", "authors": "Gauvrit S, Villasenor A, Strilic B, Kitchen P, Collins MM, Marin-Juez R, Guenther S, Maischein HM, Fukuda N, Canham MA, Brickman JM, Bogue CW, Jayaraman PS, Stainier DYR", "reference": { "type": "PubMed", "id": "30006544", "url": "https://pubmed.ncbi.nlm.nih.gov/30006544" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q7SY09-1", "protein_name": "Adhesion G protein-coupled receptor L4", "gene_name": "adgrl4", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q7SY09", "url": "https://www.uniprot.org/uniprotkb/Q7SY09" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.30006544", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Genome editing reveals reproductive and developmental dependencies on specific types of vitellogenin in zebrafish (Danio rerio).", "journal": "Mol. Reprod. Dev.", "date": "2019", "authors": "Yilmaz Ozlem, Patinote Am\u00e9lie, Nguyen Thaovi, Com Emmanuelle, Pineau Charles, Bobe Julien", "reference": { "type": "PubMed", "id": "31380595", "url": "https://pubmed.ncbi.nlm.nih.gov/31380595" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q7SY09-1", "protein_name": "Adhesion G protein-coupled receptor L4", "gene_name": "adgrl4", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q7SY09", "url": "https://www.uniprot.org/uniprotkb/Q7SY09" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.31380595", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Application of an F0-based genetic assay in adult zebrafish to identify modifier genes of an inherited cardiomyopathy.", "journal": "Dis. 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Mech.", "date": "2023", "authors": "Ding Yonghe, Wang Mingmin, Bu Haisong, Li Jiarong, Lin Xueying, Xu Xiaolei", "reference": { "type": "PubMed", "id": "35481478", "url": "https://pubmed.ncbi.nlm.nih.gov/35481478" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q7T005-1", "protein_name": "Rab11 family-interacting protein 3", "gene_name": "rab11fip3", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M1N1F2-1", "protein_name": "BAG family molecular chaperone regulator 3", "gene_name": "bag3", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1QA42-1", "protein_name": "Ataxin-2-like protein", "gene_name": "atxn2l", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q7T005", "url": "https://www.uniprot.org/uniprotkb/Q7T005" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.35481478", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Zebrafish myo7aa affects congenital hearing by regulating Rho-GTPase signaling.", "journal": "Front. 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J. Hum. Genet.", "date": "2013", "authors": "Dauber A, Golzio C, Guenot C, Jodelka FM, Kibaek M, Kjaergaard S, Leheup B, Martinet D, Nowaczyk MJ, Rosenfeld JA, Zeesman S, Zunich J, Beckmann JS, Hirschhorn JN, Hastings ML, Jacquemont S, Katsanis N", "reference": { "type": "PubMed", "id": "24140112", "url": "https://pubmed.ncbi.nlm.nih.gov/24140112" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q6IQE0-1", "protein_name": "Poly(U)-binding-splicing factor PUF60-B", "gene_name": "puf60b", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9UHX1-1", "protein_name": "Poly(U)-binding-splicing factor PUF60", "gene_name": "PUF60", "tax_name": "Human" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q6IQE0", "url": "https://www.uniprot.org/uniprotkb/Q6IQE0" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.24140112", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Differential expression of CaMK-II genes during early zebrafish embryogenesis.", "journal": "Dev. Dyn.", "date": "2007", "authors": "Rothschild Sarah C, Lister James A, Tombes Robert M", "reference": { "type": "PubMed", "id": "17103413", "url": "https://pubmed.ncbi.nlm.nih.gov/17103413" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q6DEH3-1", "protein_name": "Calcium/calmodulin-dependent protein kinase type II delta 1 chain", "gene_name": "camk2d1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q6DGS3-1", "protein_name": "Calcium/calmodulin-dependent protein kinase type II delta 2 chain", "gene_name": "camk2d2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M9Q3H8-1", "protein_name": "calcium/calmodulin-dependent protein kinase", "gene_name": "camk2b1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AB32TEY8-1", "protein_name": "calcium/calmodulin-dependent protein kinase", "gene_name": "camk2a", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q6DEH3", "url": "https://www.uniprot.org/uniprotkb/Q6DEH3" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.17103413", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A histone demethylase is necessary for regeneration in zebrafish.", "journal": "Proc. 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Mol. Cell Biol.", "date": "2018", "authors": "Wu Xiaotong, Shen Weimin, Zhang Bingjie, Meng Anming", "reference": { "type": "PubMed", "id": "30060229", "url": "https://pubmed.ncbi.nlm.nih.gov/30060229" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q566T0-1", "protein_name": "Polycomb protein eed", "gene_name": "eed", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "B7ZD15-1", "protein_name": "Olfactomedin 1b isoform 1", "gene_name": "olfm1b", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1QC30-1", "protein_name": "Forkhead box A sequence", "gene_name": "foxa", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A286Y9D1-1", "protein_name": "PHD finger protein 14", "gene_name": "phf14", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q566T0", "url": "https://www.uniprot.org/uniprotkb/Q566T0" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.30060229", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Knockdown screening of chromatin binding and regulatory proteins in zebrafish identified Suz12b as a regulator of tfpia and an antithrombotic drug target.", "journal": "Sci. Rep.", "date": "2021", "authors": "Raman Revathi, Fallatah Weam, Al Qaryoute Ayah, Dhinoja Sanchi, Jagadeeswaran Pudur", "reference": { "type": "PubMed", "id": "34315984", "url": "https://pubmed.ncbi.nlm.nih.gov/34315984" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q566T0-1", "protein_name": "Polycomb protein eed", "gene_name": "eed", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7EYR2-1", "protein_name": "Chromatin assembly factor 1 subunit B", "gene_name": "chaf1b", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4IFY9-1", "protein_name": "Sterile alpha motif domain containing 1a", "gene_name": "samd1a", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M1P2D8-1", "protein_name": "Bromodomain adjacent to zinc finger domain protein 2A", "gene_name": "baz2a", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M3AVG1-1", "protein_name": "Nuclear receptor corepressor 2", "gene_name": "ncor2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1Q4N7-1", "protein_name": "Acidic leucine-rich nuclear phosphoprotein 32 family member", "gene_name": "anp32b", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M9QGN3-1", "protein_name": "[histone H3]-trimethyl-L-lysine(27) demethylase", "gene_name": "kdm6bb", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M1NE13-1", "protein_name": "Cohesin subunit SA", "gene_name": "stag2a", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M1N7F7-1", "protein_name": "Protein phosphatase 1 regulatory subunit 19", "gene_name": "uri1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A7E2M3-1", "protein_name": "ER membrane protein complex subunit 10", "gene_name": "emc10", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "B0S6C1-1", "protein_name": "Tissue factor pathway inhibitor", "gene_name": "tfpia", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "B0S7E1-1", "protein_name": "Bromodomain-containing protein 7", "gene_name": "brd7", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AC58HMI0-1", "protein_name": "ubiquitinyl hydrolase 1", "gene_name": "atxn3", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "E9QH74-1", "protein_name": "High mobility group nucleosome-binding domain-containing protein 3", "gene_name": "hmgn3", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "E9QDJ4-1", "protein_name": "PAX3- and PAX7-binding protein 1", "gene_name": "paxbp1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1R1W8-1", "protein_name": "Protein AATF isoform 1", "gene_name": "aatf", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q6DRL5-1", "protein_name": "Myb-binding protein 1A-like protein", "gene_name": "mybbp1a", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q6DGN6-1", "protein_name": "Protein SPT2 homolog", "gene_name": "spty2d1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q7ZUW7-1", "protein_name": "Protein Mdm4", "gene_name": "mdm4", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M2B5P2-1", "protein_name": "Intron Large complex component GCFC2 isoform X1", "gene_name": "gcfc2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M2B866-1", "protein_name": "Nuclear factor related to kappa-B-binding protein", "gene_name": "nfrkb", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A8E7S8-1", "protein_name": "Mortality factor 4-like protein 1", "gene_name": "morf4l1", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q566T0", "url": "https://www.uniprot.org/uniprotkb/Q566T0" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.34315984", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 22 } ], "sort_fields": [ 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Loss of Polycomb Repressive Complex 2 Function Alters Digestive Organ Homeostasis and Neuronal Differentiation in Zebrafish.", "journal": "Cells", "date": "2021", "authors": "Raby Ludivine, V\u00f6lkel Pamela, Hasanpour Shaghayegh, Cicero Julien, Toillon Robert-Alain, Adriaenssens Eric, Van Seuningen Isabelle, Le Bourhis Xuefen, Angrand Pierre-Olivier", "reference": { "type": "PubMed", "id": "34831364", "url": "https://pubmed.ncbi.nlm.nih.gov/34831364" }, 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"table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The toxic effect of triclosan and methyl-triclosan on biological pathways revealed by metabolomics and gene expression in zebrafish embryos.", "journal": "Ecotoxicol. Environ. 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Mol. 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