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Biol.", "date": "2010", "authors": "Gesemann Matthias, Lesslauer Annegret, Maurer Colette M, Sch\u00f6nthaler Helia B, Neuhauss Stephan C F", "reference": { "type": "PubMed", "id": "20429920", "url": "https://pubmed.ncbi.nlm.nih.gov/20429920" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0ACD6B5C4-1", "protein_name": "Amino acid transporter", "gene_name": "slc1a4", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8N7UZX7-1", "protein_name": "Amino acid transporter", "gene_name": "slc1a2b", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0ACD6B5C4", "url": "https://www.uniprot.org/uniprotkb/A0ACD6B5C4" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.20429920", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Excitatory amino acid transporters in the zebrafish: Letter to `Expression and functional analysis of Na(+)-dependent glutamate transporters from zebrafish brain` from Rico et al.", "journal": "Brain Res. 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Dis.", "date": "2017", "authors": "Scheldeman Chlo\u00eb, Mills James D, Siekierska Aleksandra, Serra Ines, Copmans Dani\u00eblle, Iyer Anand M, Whalley Benjamin J, Maes Jan, Jansen Anna C, Lagae Lieven, Aronica Eleonora, de Witte Peter A M", "reference": { "type": "PubMed", "id": "28888969", "url": "https://pubmed.ncbi.nlm.nih.gov/28888969" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0ACD6B5C4-1", "protein_name": "Amino acid transporter", "gene_name": "slc1a4", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7F6V6-1", "protein_name": "Magnesium-dependent phosphatase 1", "gene_name": "mdp1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "F8W2U6-1", "protein_name": "Galectin", "gene_name": "lgals2b", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AB13AB14-1", "protein_name": "Glutamine--tRNA ligase", "gene_name": "qars1", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0ACD6B5C4", "url": "https://www.uniprot.org/uniprotkb/A0ACD6B5C4" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.28888969", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Deletion of Slc1a4 Suppresses Single Mauthner Cell Axon Regeneration In Vivo through Growth-Associated Protein 43.", "journal": "Int. 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Sci.", "date": "2024", "authors": "Li Keqiang, Fan Dinggang, Zhou Junhui, Zhao Ziang, Han Along, Song Zheng, Tang Xiahui, Hu Bing", "reference": { "type": "PubMed", "id": "39456733", "url": "https://pubmed.ncbi.nlm.nih.gov/39456733" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0ACD6B5C4-1", "protein_name": "Amino acid transporter", "gene_name": "slc1a4", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "P79734-1", "protein_name": "Cellular tumor antigen p53", "gene_name": "tp53", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M1P7P8-1", "protein_name": "Neuromodulin", "gene_name": "gap43", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0ACD6B5C4", "url": "https://www.uniprot.org/uniprotkb/A0ACD6B5C4" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.39456733", "abstract": 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Wyart Claire, Bardet Pierre-Luc", "reference": { "type": "PubMed", "id": "31002663", "url": "https://pubmed.ncbi.nlm.nih.gov/31002663" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0AC58G7W5-1", "protein_name": "Espin isoform X1", "gene_name": "espn", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M2BAV5-1", "protein_name": "BAR/IMD domain-containing adapter protein 2", "gene_name": "baiap2a", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0AC58G7W5", "url": "https://www.uniprot.org/uniprotkb/A0AC58G7W5" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.31002663", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], 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Biol.", "date": "2021", "authors": "Wu Shuang, Chen Kai, Xu Tao, Ma Ke, Gao Lei, Fu Cong, Zhang Wenjuan, Jing Changbin, Ren Chunguang, Deng Min, Chen Yi, Zhou Yi, Pan Weijun, Jia Xiaoe", "reference": { "type": "PubMed", "id": "34722501", "url": "https://pubmed.ncbi.nlm.nih.gov/34722501" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0ACD6B5A8-1", "protein_name": "Nuclear pore glycoprotein p62", "gene_name": "nup62l", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5RI09-1", "protein_name": "Nucleoprotein TPR", "gene_name": "tprb", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5RI07-1", "protein_name": "Phosducin b", "gene_name": "pdcb", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AC58I2W8-1", "protein_name": "Proteoglycan 4b isoform X1", "gene_name": "prg4b", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0ACD6B5A8", "url": 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Biol.", "date": "2012", "authors": "Seebacher Frank, Walter Isabel", "reference": { "type": "PubMed", "id": "22279074", "url": "https://pubmed.ncbi.nlm.nih.gov/22279074" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0ACD6B7I4-1", "protein_name": "Calcium-transporting ATPase", "gene_name": "atp2a2b", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0ACD6B7I4", "url": "https://www.uniprot.org/uniprotkb/A0ACD6B7I4" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.22279074", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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Exp. Biol.", "date": "2013", "authors": "Little Alexander G, Seebacher Frank", "reference": { "type": "PubMed", "id": "23966591", "url": "https://pubmed.ncbi.nlm.nih.gov/23966591" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0ACD6B7I4-1", "protein_name": "Calcium-transporting ATPase", "gene_name": "atp2a2b", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M1P2H4-1", "protein_name": "Phospholamban", "gene_name": "pln1", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0ACD6B7I4", "url": "https://www.uniprot.org/uniprotkb/A0ACD6B7I4" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.23966591", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Medaka Oct4 is essential for pluripotency in blastula formation and ES cell derivation.", "journal": "Stem. 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Biochem. Mol. Toxicol.", "date": "2015", "authors": "Hong Zhuan, Zhang Youyu, Zuo Zhenghong, Zhu Ruilin, Gao Yahui", "reference": { "type": "PubMed", "id": "25691335", "url": "https://pubmed.ncbi.nlm.nih.gov/25691335" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0ACD6B7I4-1", "protein_name": "Calcium-transporting ATPase", "gene_name": "atp2a2b", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0ACD6B7I4", "url": "https://www.uniprot.org/uniprotkb/A0ACD6B7I4" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.25691335", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Deficiency in the membrane protein Tmbim3a/Grinaa initiates cold-induced ER stress and cell death by activating an intrinsic apoptotic pathway in zebrafish.", "journal": "J. Biol. Chem.", "date": "2019", "authors": "Chen Kai, Li Xixi, Song Guili, Zhou Tong, Long Yong, Li Qing, Zhong Shan, Cui Zongbin", "reference": { "type": "PubMed", "id": "31171717", "url": "https://pubmed.ncbi.nlm.nih.gov/31171717" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0ACD6B7I4-1", "protein_name": "Calcium-transporting ATPase", "gene_name": "atp2a2b", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M2B4U7-1", "protein_name": "Glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1b (Glutamate binding)", "gene_name": "grinab", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0ACD6B7I4", "url": "https://www.uniprot.org/uniprotkb/A0ACD6B7I4" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.31171717", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": 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J. Mol. Sci.", "date": "2022", "authors": "Lai Hsin-Hung, Yeh Kun-Yun, Hsu Hung-Ming, Her Guor Mour", "reference": { "type": "PubMed", "id": "36613558", "url": "https://pubmed.ncbi.nlm.nih.gov/36613558" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0ACD6B7I4-1", "protein_name": "Calcium-transporting ATPase", "gene_name": "atp2a2b", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M1N978-1", "protein_name": "Myosin-binding protein C, fast-type", "gene_name": "mybpc3", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0ACD6B7I4", "url": "https://www.uniprot.org/uniprotkb/A0ACD6B7I4" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.36613558", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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MDR method in the Hanwoo.", "journal": "Genes & genomics", "date": "2021-08", "authors": "Kim Songmi, Lee Yong-Moon, Kim Dong Hee, Ha Jae Jung, Yi Jun Koo, Kim Dae Hyun, Oh Dongyep, Han Kyudong", "reference": { "type": "PubMed", "id": "34129193", "url": "https://pubmed.ncbi.nlm.nih.gov/34129193" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P10894-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1", "gene_name": "PLCB1", "tax_name": "Bovine" }, { "uniprot_canonical_ac": "F1MUI1-1", "protein_name": "Tudor and KH domain-containing protein", "gene_name": "TDRKH", "tax_name": "Bovine" } ], "species": [ { "name": "Bos taurus", "taxid": 9913, "evidence": [ { "database": "UniProtKB", "id": "P10894", "url": "https://www.uniprot.org/uniprotkb/P10894" } ], "common_name": "Bovine", "glygen_name": "Bovine", "reference_species": "Bos taurus [9913]" } ], "record_id": "pubmed.34129193", "abstract": "", "glycosylation": [], 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groups with structural information about actin-related protein 2 and potential WASP binding sites.", "journal": "Acta crystallographica. 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Structural basis for type IV collagen assembly in basement membranes.", "journal": "J. Biol. 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"journal": "Archives of biochemistry and biophysics", "date": "2014", "authors": "Dhayan H, Baydoun AR, Kukol A", "reference": { "type": "PubMed", "id": "25051342", "url": "https://pubmed.ncbi.nlm.nih.gov/25051342" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q3SZX0-1", "protein_name": "Phospholemman", "gene_name": "FXYD1", "tax_name": "Bovine" } ], "species": [ { "name": "Bos taurus", "taxid": 9913, "evidence": [ { "database": "UniProtKB", "id": "Q3SZX0", "url": "https://www.uniprot.org/uniprotkb/Q3SZX0" } ], "common_name": "Bovine", "glygen_name": "Bovine", "reference_species": "Bos taurus [9913]" } ], "record_id": "pubmed.25051342", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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Biol. Chem.", "date": "1993", "authors": "Davletov B, Sontag J M, Hata Y, Petrenko A G, Fykse E M, Jahn R, S\u00fcdhof T C", "reference": { "type": "PubMed", "id": "8454654", "url": "https://pubmed.ncbi.nlm.nih.gov/8454654" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P48018-1", "protein_name": "Synaptotagmin-1", "gene_name": "SYT1", "tax_name": "Bovine" } ], "species": [ { "name": "Bos taurus", "taxid": 9913, "evidence": [ { "database": "UniProtKB", "id": "P48018", "url": "https://www.uniprot.org/uniprotkb/P48018" } ], "common_name": "Bovine", "glygen_name": "Bovine", "reference_species": "Bos taurus [9913]" } ], "record_id": "pubmed.8454654", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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Mol. Biol.", "date": "1985", "authors": "Walker J E, Fearnley I M, Gay N J, Gibson B W, Northrop F D, Powell S J, Runswick M J, Saraste M, Tybulewicz V L", "reference": { "type": "PubMed", "id": "2864455", "url": "https://pubmed.ncbi.nlm.nih.gov/2864455" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P00829-1", "protein_name": "ATP synthase F(1) complex catalytic subunit beta, mitochondrial", "gene_name": "ATP5F1B", "tax_name": "Bovine" }, { "uniprot_canonical_ac": "P05631-1", "protein_name": "ATP synthase F(1) complex subunit gamma, mitochondrial", "gene_name": "ATP5F1C", "tax_name": "Bovine" }, { "uniprot_canonical_ac": "P19483-1", "protein_name": "ATP synthase F(1) complex subunit alpha, mitochondrial", "gene_name": "ATP5F1A", "tax_name": "Bovine" }, { "uniprot_canonical_ac": "P05630-1", "protein_name": "ATP synthase F(1) complex subunit delta, mitochondrial", "gene_name": "ATP5F1D", "tax_name": "Bovine" }, { "uniprot_canonical_ac": "P05632-1", "protein_name": "ATP synthase F(1) complex subunit epsilon, mitochondrial", "gene_name": "ATP5F1E; LOC132343467", "tax_name": "Bovine" } ], "species": [ { "name": "Bos taurus", "taxid": 9913, "evidence": [ { "database": "UniProtKB", "id": "P00829", "url": "https://www.uniprot.org/uniprotkb/P00829" } ], "common_name": "Bovine", "glygen_name": "Bovine", "reference_species": "Bos taurus [9913]" } ], "record_id": "pubmed.2864455", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Sequence analysis of cDNAs for the human and bovine ATP synthase beta subunit: mitochondrial DNA genes sustain seventeen times more mutations.", "journal": "Curr. Genet.", "date": "1987", "authors": "Wallace DC, Ye JH, Neckelmann SN, Singh G, Webster KA, Greenberg BD", "reference": { "type": "PubMed", "id": "2896550", "url": "https://pubmed.ncbi.nlm.nih.gov/2896550" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P00829-1", "protein_name": "ATP synthase F(1) complex catalytic subunit beta, mitochondrial", "gene_name": "ATP5F1B", "tax_name": "Bovine" }, { "uniprot_canonical_ac": "P06576-1", "protein_name": "ATP synthase F(1) complex subunit beta, mitochondrial", "gene_name": "ATP5F1B", "tax_name": "Human" } ], "species": [ { "name": "Bos taurus", "taxid": 9913, "evidence": [ { "database": "UniProtKB", "id": "P00829", "url": "https://www.uniprot.org/uniprotkb/P00829" } ], "common_name": "Bovine", "glygen_name": "Bovine", "reference_species": "Bos taurus [9913]" } ], "record_id": "pubmed.2896550", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structural elucidation of N-terminal post-translational modifications by mass spectrometry: application to chicken enolase and the alpha- and beta-subunits of bovine mitochondrial F1-ATPase.", "journal": "Anal. 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