[ { "title": "DUSP8 induces TGF-\u03b2-stimulated IL-9 transcription and Th9-mediated allergic inflammation by promoting nuclear export of Pur-\u03b1.", "journal": "The Journal of clinical investigation", "date": "2023-11-01", "authors": "Chuang Huai-Chia, Hsueh Chia-Hsin, Hsu Pu-Ming, Tsai Ching-Yi, Shih Ying-Chun, Chiu Hsien-Yi, Chen Yi-Ming, Yu Wen-Kuang, Chen Ming-Han, Tan Tse-Hua", "reference": { "type": "PubMed", "id": "37909329", "url": "https://pubmed.ncbi.nlm.nih.gov/37909329" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P42669-1", "protein_name": "Transcriptional activator protein Pur-alpha", "gene_name": "Pura", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q00577-1", "protein_name": "Transcriptional activator protein Pur-alpha", "gene_name": "PURA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O09112-1", "protein_name": "Dual specificity protein phosphatase 8", "gene_name": "Dusp8", "tax_name": "Mouse" }, { 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Biol. Chem.", "date": "1997", "authors": "Kelm RJ Jr, Elder PK, Strauch AR, Getz MJ", "reference": { "type": "PubMed", "id": "9334258", "url": "https://pubmed.ncbi.nlm.nih.gov/9334258" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P42669-1", "protein_name": "Transcriptional activator protein Pur-alpha", "gene_name": "Pura", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O35295-1", "protein_name": "Transcriptional regulator protein Pur-beta", "gene_name": "Purb", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P42669", "url": "https://www.uniprot.org/uniprotkb/P42669" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.9334258", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Congenic mapping of alcohol and pentobarbital withdrawal liability loci to a <1 centimorgan interval of murine chromosome 4: identification of Mpdz as a candidate gene.", "journal": "J. 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No effect on synapse assembly.", "evidence": [ { "database": "UniProtKB", "id": "Q810C0", "url": "https://www.uniprot.org/uniprotkb/Q810C0" }, { "database": "PubMed", "id": "25989451", "url": "https://pubmed.ncbi.nlm.nih.gov/25989451" } ], "uniprot_canonical_ac": "Q810C0-1" } ], "record_id": "pubmed.25989451", "abstract": "", "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 4 }, { "field": "total_sites", "count": 4 }, { "field": "n_linked_sites", "count": 4 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { 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"field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Loss of protein tyrosine phosphatase receptor delta PTPRD increases the number of cortical neurons, impairs synaptic function and induces autistic-like behaviors in adult mice.", "journal": "Biological research", "date": "2024-06-18", "authors": "Cort\u00e9s Basti\u00e1n I, Meza Rodrigo C, Ancat\u00e9n-Gonz\u00e1lez Carlos, Ardiles Nicol\u00e1s M, Ar\u00e1nguiz Mar\u00eda-Ignacia, Tomita Hideaki, Kaplan David R, Cornejo Francisca, Nunez-Parra Alexia, Moya Pablo R, Ch\u00e1vez Andr\u00e9s E, Cancino Gonzalo I", "reference": { "type": "PubMed", "id": "38890753", "url": "https://pubmed.ncbi.nlm.nih.gov/38890753" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q64487-4", "protein_name": "Receptor-type tyrosine-protein phosphatase delta", "gene_name": "Ptprd", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q64487", "url": "https://www.uniprot.org/uniprotkb/Q64487" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.38890753", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "MPTP delta, a putative murine homolog of HPTP delta, is expressed in specialized regions of the brain and in the B-cell lineage.", "journal": "Mol. Cell. Biol.", "date": "1993", "authors": "Mizuno K, Hasegawa K, Katagiri T, Ogimoto M, Ichikawa T, Yakura H", "reference": { "type": "PubMed", "id": "8355697", "url": "https://pubmed.ncbi.nlm.nih.gov/8355697" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q64487-4", "protein_name": "Receptor-type tyrosine-protein phosphatase delta", "gene_name": "Ptprd", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q64487", "url": "https://www.uniprot.org/uniprotkb/Q64487" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.8355697", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Expression and functional significance of mouse paraspeckle protein 1 on spermatogenesis.", "journal": "Biol. Reprod.", "date": "2004", "authors": "Myojin R, Kuwahara S, Yasaki T, Matsunaga T, Sakurai T, Kimura M, Uesugi S, Kurihara Y", "reference": { "type": "PubMed", "id": "15140795", "url": "https://pubmed.ncbi.nlm.nih.gov/15140795" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8R326-1", "protein_name": "Paraspeckle component 1", "gene_name": "Pspc1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8VIJ6-1", "protein_name": "Splicing factor, proline- and glutamine-rich", "gene_name": "Sfpq", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q99K48-1", "protein_name": "Non-POU domain-containing octamer-binding protein", "gene_name": "Nono", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8R326", "url": "https://www.uniprot.org/uniprotkb/Q8R326" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.15140795", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { 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}, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Regulating gene expression through RNA nuclear retention.", "journal": "Cell", "date": "2005", "authors": "Prasanth Kannanganattu V, Prasanth Supriya G, Xuan Zhenyu, Hearn Stephen, Freier Susan M, Bennett C Frank, Zhang Michael Q, Spector David L", "reference": { "type": "PubMed", "id": "16239143", "url": "https://pubmed.ncbi.nlm.nih.gov/16239143" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8R326-1", "protein_name": "Paraspeckle component 1", "gene_name": "Pspc1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P18581-1", "protein_name": "Cationic amino acid transporter 2", "gene_name": "Slc7a2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8R326", "url": "https://www.uniprot.org/uniprotkb/Q8R326" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.16239143", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", 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Chem.", "date": "2000", "authors": "Xiao G, Jiang D, Thomas P, Benson M D, Guan K, Karsenty G, Franceschi R T", "reference": { "type": "PubMed", "id": "10660618", "url": "https://pubmed.ncbi.nlm.nih.gov/10660618" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q08775-1", "protein_name": "Runt-related transcription factor 2", "gene_name": "Runx2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q08775", "url": "https://www.uniprot.org/uniprotkb/Q08775" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.10660618", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The interferon-inducible p204 protein acts as a transcriptional coactivator of Cbfa1 and enhances osteoblast differentiation.", "journal": "J. 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Cell. Biochem.", "date": "2008", "authors": "Jensen Eric D, Niu Lingling, Caretti Giuseppina, Nicol Samantha M, Teplyuk Nadiya, Stein Gary S, Sartorelli Vittorio, van Wijnen Andre J, Fuller-Pace Frances V, Westendorf Jennifer J", "reference": { "type": "PubMed", "id": "17960593", "url": "https://pubmed.ncbi.nlm.nih.gov/17960593" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q08775-1", "protein_name": "Runt-related transcription factor 2", "gene_name": "Runx2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P17844-1", "protein_name": "Probable ATP-dependent RNA helicase DDX5", "gene_name": "DDX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q61656-1", "protein_name": "Probable ATP-dependent RNA helicase DDX5", "gene_name": "Ddx5", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q08775", "url": "https://www.uniprot.org/uniprotkb/Q08775" } ], "common_name": "Mouse", 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Natl. Acad. Sci. 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interaction of the TWIK1 K+ channel with EFA6, a GDP/GTP exchange factor for ARF6.", "journal": "EMBO Rep.", "date": "2004", "authors": "Decressac S, Franco M, Bendahhou S, Warth R, Knauer S, Barhanin J, Lazdunski M, Lesage F", "reference": { "type": "PubMed", "id": "15540117", "url": "https://pubmed.ncbi.nlm.nih.gov/15540117" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q5DTT2-1", "protein_name": "PH and SEC7 domain-containing protein 1", "gene_name": "Psd", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O08581-1", "protein_name": "Potassium channel subfamily K member 1", "gene_name": "Kcnk1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q5DTT2", "url": "https://www.uniprot.org/uniprotkb/Q5DTT2" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.15540117", "abstract": "", "glycosylation": [], 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"o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Somatodendritic localization of EFA6A, a guanine nucleotide exchange factor for ADP-ribosylation factor 6, and its possible interaction with alpha-actinin in dendritic spines.", "journal": "Eur. J. Neurosci.", "date": "2007", "authors": "Sakagami H, Honma T, Sukegawa J, Owada Y, Yanagisawa T, Kondo H", "reference": { "type": "PubMed", "id": "17298598", "url": "https://pubmed.ncbi.nlm.nih.gov/17298598" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q5DTT2-1", "protein_name": "PH and SEC7 domain-containing protein 1", "gene_name": "Psd", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q7TPR4-1", "protein_name": "Alpha-actinin-1", "gene_name": "Actn1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q5DTT2", "url": "https://www.uniprot.org/uniprotkb/Q5DTT2" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.17298598", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { 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"field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "EFA6A, an Exchange Factor for Arf6, Regulates NGF-Dependent TrkA Recycling From Early Endosomes and Neurite Outgrowth in PC12 Cells.", "journal": "Traffic (Copenhagen, Denmark)", "date": "2024-05", "authors": "Fukaya Masahiro, Ibuchi Kanta, Sugawara Takeyuki, Itakura Makoto, Ito Akiko, Shiroshima Tomoko, Hara Yoshinobu, Okamoto Hirotsugu, Luton Fr\u00e9d\u00e9ric, Sakagami Hiroyuki", "reference": { "type": "PubMed", "id": "38725127", "url": "https://pubmed.ncbi.nlm.nih.gov/38725127" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q5DTT2-1", "protein_name": "PH and SEC7 domain-containing protein 1", "gene_name": "Psd", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P35739-1", "protein_name": "High affinity nerve growth factor receptor", "gene_name": "Ntrk1", "tax_name": "Rat" }, { "uniprot_canonical_ac": "P25427-1", "protein_name": "Beta-nerve growth factor", "gene_name": "Ngf", "tax_name": "Rat" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q5DTT2", "url": "https://www.uniprot.org/uniprotkb/Q5DTT2" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.38725127", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "MHox: a mesodermally restricted homeodomain protein that binds an essential site in the muscle creatine kinase enhancer.", "journal": "Development (Cambridge, England)", "date": "1992-08", "authors": "Cserjesi P, Lilly B, Bryson L, Wang Y, Sassoon D A, Olson E N", "reference": { "type": "PubMed", "id": "1360403", "url": "https://pubmed.ncbi.nlm.nih.gov/1360403" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P63013-1", "protein_name": "Paired mesoderm homeobox protein 1", "gene_name": "Prrx1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P63013", "url": "https://www.uniprot.org/uniprotkb/P63013" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.1360403", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], 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[] } ] }, { "title": "Tyr728 in the kinase domain of the murine kinase suppressor of RAS 1 regulates binding and activation of the mitogen-activated protein kinase kinase.", "journal": "The Journal of biological chemistry", "date": "2013", "authors": "Sibilski C, Mueller T, Kollipara L, Zahedi RP, Rapp UR, Rudel T, Baljuls A", "reference": { "type": "PubMed", "id": "24158441", "url": "https://pubmed.ncbi.nlm.nih.gov/24158441" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q61097-1", "protein_name": "Kinase suppressor of Ras 1", "gene_name": "Ksr1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q61097", "url": "https://www.uniprot.org/uniprotkb/Q61097" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "phosphorylation": [ { "start_pos": 728, "end_pos": 728, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", 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independently from mitochondrial fusion.", "journal": "Cell", "date": "2006-07-14", "authors": "Frezza Christian, Cipolat Sara, Martins de Brito Olga, Micaroni Massimo, Beznoussenko Galina V, Rudka Tomasz, Bartoli Davide, Polishuck Roman S, Danial Nika N, De Strooper Bart, Scorrano Luca", "reference": { "type": "PubMed", "id": "16839885", "url": "https://pubmed.ncbi.nlm.nih.gov/16839885" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P58281-1", "protein_name": "Dynamin-like GTPase OPA1, mitochondrial", "gene_name": "Opa1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P58281", "url": "https://www.uniprot.org/uniprotkb/P58281" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.16839885", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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Larsson Nils-G\u00f6ran, Neupert Walter, Reichert Andreas S", "reference": { "type": "PubMed", "id": "17003040", "url": "https://pubmed.ncbi.nlm.nih.gov/17003040" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P58281-1", "protein_name": "Dynamin-like GTPase OPA1, mitochondrial", "gene_name": "Opa1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P58281", "url": "https://www.uniprot.org/uniprotkb/P58281" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.17003040", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", 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