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U.S.A.", "date": "2001", "authors": "Young J, Biden K G, Simms L A, Huggard P, Karamatic R, Eyre H J, Sutherland G R, Herath N, Barker M, Anderson G J, Fitzpatrick D R, Ramm G A, Jass J R, Leggett B A", "reference": { "type": "PubMed", "id": "11120884", "url": "https://pubmed.ncbi.nlm.nih.gov/11120884" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UIK5-1", "protein_name": "Tomoregulin-2", "gene_name": "TMEFF2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UIK5", "url": "https://www.uniprot.org/uniprotkb/Q9UIK5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11120884", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Roles of a TMPO-AS1/microRNA-200c/TMEFF2 ceRNA network in the malignant behaviors and 5-FU resistance of ovarian cancer cells.", "journal": "Experimental and molecular pathology", "date": "2020", "authors": "Li H, Zhou Y, Cheng H, Tian J, Yang S", "reference": { "type": "PubMed", "id": "32497621", "url": "https://pubmed.ncbi.nlm.nih.gov/32497621" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UIK5-1", "protein_name": "Tomoregulin-2", "gene_name": "TMEFF2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UIK5", "url": "https://www.uniprot.org/uniprotkb/Q9UIK5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.32497621", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UIK5", "url": "https://www.uniprot.org/uniprotkb/Q9UIK5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.34339705", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": 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[] } ] }, { "title": "Nomenclature of the human immunoglobulin heavy (IGH) genes.", "journal": "Exp. Clin. Immunogenet.", "date": "2001", "authors": "Lefranc M P", "reference": { "type": "PubMed", "id": "11340299", "url": "https://pubmed.ncbi.nlm.nih.gov/11340299" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A075B6R9-1", "protein_name": "Probable non-functional immunoglobulin kappa variable 2D-24", "gene_name": "IGKV2D-24", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01871-2", "protein_name": "Immunoglobulin heavy constant mu", "gene_name": "IGHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0C4DH62-1", "protein_name": "Immunoglobulin heavy joining 1", "gene_name": "IGHJ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A075B6R2-1", "protein_name": "Immunoglobulin heavy variable 4-4", "gene_name": "IGHV4-4", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0B4J1U7-1", "protein_name": "Immunoglobulin heavy variable 6-1", "gene_name": "IGHV6-1", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0B4J1V0-1", "protein_name": "Immunoglobulin heavy variable 3-15", "gene_name": "IGHV3-15", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0J9YVY3-1", "protein_name": "Immunoglobulin heavy variable 7-4-1", "gene_name": "IGHV7-4-1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01767-1", "protein_name": "Immunoglobulin heavy variable 3-53", "gene_name": "IGHV3-53", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06331-1", "protein_name": "Immunoglobulin heavy variable 4-34", "gene_name": "IGHV4-34", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DP03-1", "protein_name": "Immunoglobulin heavy variable 3-30-5", "gene_name": "IGHV3-30-5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DP04-1", "protein_name": "Immunoglobulin heavy variable 3-43D", "gene_name": "IGHV3-43D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DP06-1", "protein_name": "Immunoglobulin heavy variable 4-30-4", "gene_name": "IGHV4-30-4", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0C4DH35-1", "protein_name": "Probable non-functional immunoglobulin heavy variable 3-35", "gene_name": "IGHV3-35", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DTW3-1", "protein_name": "Probable non-functional immunoglobulin heavy variable 1-38-4", "gene_name": "IGHV1-38-4", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A075B6H7-1", "protein_name": "Probable non-functional immunoglobulin kappa variable 3-7", "gene_name": "IGKV3-7", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A075B6S9-1", "protein_name": "Probable non-functional immunoglobulin kappa variable 1-37", "gene_name": "IGKV1-37", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01860-2", "protein_name": "Immunoglobulin heavy constant gamma 3", "gene_name": "IGHG3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01861-2", "protein_name": "Immunoglobulin heavy constant gamma 4", "gene_name": "IGHG4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01876-2", "protein_name": "Immunoglobulin heavy constant alpha 1", "gene_name": "IGHA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01880-2", "protein_name": "Immunoglobulin heavy constant delta", "gene_name": "IGHD", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A075B6H8-1", "protein_name": "Probable non-functional immunoglobulin kappa variable 1D-42", "gene_name": "IGKV1D-42", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0C4DH30-1", "protein_name": "Probable non-functional immunoglobulin heavy variable 3-16", "gene_name": "IGHV3-16", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A075B6J2-1", "protein_name": "Probable non-functional immunoglobulin lambda variable 2-33", "gene_name": "IGLV2-33", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DSN7-1", "protein_name": "Probable non-functional immunoglobulin kappa variable 1D-37", "gene_name": "IGKV1D-37", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DTE2-1", "protein_name": "Probable non-functional immunoglobulin heavy variable 8-51-1", "gene_name": "IGHV8-51-1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DTE1-1", "protein_name": "Probable non-functional immunoglobulin heavy variable 3-38-3", "gene_name": "IGHV3-38-3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01825-1", "protein_name": "Immunoglobulin heavy variable 4-59", "gene_name": "IGHV4-59", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DOY5-1", "protein_name": "Immunoglobulin heavy diversity 1-1", "gene_name": "IGHD1-1", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0A0MS15-1", "protein_name": "Immunoglobulin heavy variable 3-49", "gene_name": "IGHV3-49", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0B4J1X8-1", "protein_name": "Immunoglobulin heavy variable 3-43", "gene_name": "IGHV3-43", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0B4J1Y9-1", "protein_name": "Immunoglobulin heavy variable 3-72", "gene_name": "IGHV3-72", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0C4DH34-1", "protein_name": "Immunoglobulin heavy variable 4-28", "gene_name": "IGHV4-28", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0C4DH38-1", "protein_name": "Immunoglobulin heavy variable 5-51", "gene_name": "IGHV5-51", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0C4DH39-1", "protein_name": "Immunoglobulin heavy variable 1-58", "gene_name": "IGHV1-58", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0C4DH42-1", "protein_name": "Immunoglobulin heavy variable 3-66", "gene_name": "IGHV3-66", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01817-1", "protein_name": "Immunoglobulin heavy variable 2-5", "gene_name": "IGHV2-5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01824-1", "protein_name": "Immunoglobulin heavy variable 4-39", "gene_name": "IGHV4-39", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DP07-1", "protein_name": "Immunoglobulin heavy variable 4-31", "gene_name": "IGHV4-31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23083-1", "protein_name": "Immunoglobulin heavy variable 1-2", "gene_name": "IGHV1-2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01742-1", "protein_name": "Immunoglobulin heavy variable 1-69", "gene_name": "IGHV1-69", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01768-1", "protein_name": "Immunoglobulin heavy variable 3-30", "gene_name": "IGHV3-30", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01814-1", "protein_name": "Immunoglobulin heavy variable 2-70", "gene_name": "IGHV2-70", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01772-1", "protein_name": "Immunoglobulin heavy variable 3-33", "gene_name": "IGHV3-33", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A075B6Q5-1", "protein_name": "Immunoglobulin heavy variable 3-64", "gene_name": "IGHV3-64", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A087WSY4-1", "protein_name": "Immunoglobulin heavy variable 4-30-2", "gene_name": "IGHV4-30-2", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0B4J1V1-1", "protein_name": "Immunoglobulin heavy variable 3-21", "gene_name": "IGHV3-21", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0B4J1V2-1", "protein_name": "Immunoglobulin heavy variable 2-26", "gene_name": "IGHV2-26", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0B4J1V6-1", "protein_name": "Immunoglobulin heavy variable 3-73", "gene_name": "IGHV3-73", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0B4J1X5-1", "protein_name": "Immunoglobulin heavy variable 3-74", "gene_name": "IGHV3-74", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0B4J2H0-1", "protein_name": "Immunoglobulin heavy variable 1-69D", "gene_name": "IGHV1-69D", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0C4DH31-1", "protein_name": "Immunoglobulin heavy variable 1-18", "gene_name": "IGHV1-18", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0C4DH32-1", "protein_name": "Immunoglobulin heavy variable 3-20", "gene_name": "IGHV3-20", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0J9YXX1-1", "protein_name": "Immunoglobulin heavy variable 5-10-1", "gene_name": "IGHV5-10-1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01762-1", "protein_name": "Immunoglobulin heavy variable 3-11", "gene_name": "IGHV3-11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01763-1", "protein_name": "Immunoglobulin heavy variable 3-48", "gene_name": "IGHV3-48", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01764-1", "protein_name": "Immunoglobulin heavy variable 3-23", "gene_name": "IGHV3-23", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01766-1", "protein_name": "Immunoglobulin heavy variable 3-13", "gene_name": "IGHV3-13", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01780-1", "protein_name": "Immunoglobulin heavy variable 3-7", "gene_name": "IGHV3-7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01782-1", "protein_name": "Immunoglobulin heavy variable 3-9", "gene_name": "IGHV3-9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DP02-1", "protein_name": "Immunoglobulin heavy variable 3-30-3", "gene_name": "IGHV3-30-3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DP08-1", "protein_name": "Immunoglobulin heavy variable 4-38-2", "gene_name": "IGHV4-38-2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01877-2", "protein_name": "Immunoglobulin heavy constant alpha 2", "gene_name": "IGHA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01859-2", "protein_name": "Immunoglobulin heavy constant gamma 2", "gene_name": "IGHG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A075B6I7-1", "protein_name": "Probable non-functional immunoglobulin lambda variable 5-48", "gene_name": "IGLV5-48", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A075B6I3-1", "protein_name": "Probable non-functional immunoglobulin lambda variable 11-55", "gene_name": "IGLV11-55", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A075B6I6-1", "protein_name": "Probable non-functional immunoglobulin lambda variable 1-50", "gene_name": "IGLV1-50", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0A0MS14-1", "protein_name": "Immunoglobulin heavy variable 1-45", "gene_name": "IGHV1-45", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0C4DH29-1", "protein_name": "Immunoglobulin heavy variable 1-3", "gene_name": "IGHV1-3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0C4DH33-1", "protein_name": "Immunoglobulin heavy variable 1-24", "gene_name": "IGHV1-24", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0C4DH41-1", "protein_name": "Immunoglobulin heavy variable 4-61", "gene_name": "IGHV4-61", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0C4DH43-1", "protein_name": "Immunoglobulin heavy variable 2-70D", "gene_name": "IGHV2-70D", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0G2JMI3-1", "protein_name": "Immunoglobulin heavy variable 1-69-2", "gene_name": "IGHV1-69-2", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0J9YX35-1", "protein_name": "Immunoglobulin heavy variable 3-64D", "gene_name": "IGHV3-64D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01743-1", "protein_name": "Immunoglobulin heavy variable 1-46", "gene_name": "IGHV1-46", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01854-2", "protein_name": "Immunoglobulin heavy constant epsilon", "gene_name": "IGHE", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DP01-1", "protein_name": "Immunoglobulin heavy variable 1-8", "gene_name": "IGHV1-8", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0B4J1V7-1", "protein_name": "Probable non-functional immunoglobulin heavy variable 7-81", "gene_name": "IGHV7-81", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01857-2", "protein_name": "Immunoglobulin heavy constant gamma 1", "gene_name": "IGHG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0A0MS00-1", "protein_name": "Probable non-functional immunoglobulin lambda variable 3-32", "gene_name": "IGLV3-32", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0C4DH36-1", "protein_name": "Probable non-functional immunoglobulin heavy variable 3-38", "gene_name": "IGHV3-38", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0C4DH26-1", "protein_name": "Probable non-functional immunoglobulin kappa variable 6D-41", "gene_name": "IGKV6D-41", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "A0A075B6R9", "url": "https://www.uniprot.org/uniprotkb/A0A075B6R9" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11340299", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 81 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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A new section of Experimental and Clinical Immunogenetics.", "journal": "Experimental and clinical immunogenetics", "date": "1998", "authors": "Lefranc M P", "reference": { "type": "PubMed", "id": "9619395", "url": "https://pubmed.ncbi.nlm.nih.gov/9619395" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A075B6R9-1", "protein_name": "Probable non-functional immunoglobulin kappa variable 2D-24", "gene_name": "IGKV2D-24", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0A0MS03-1", "protein_name": "Probable non-functional T cell receptor beta variable 5-3", "gene_name": "TRBV5-3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0A0MS05-1", "protein_name": "Probable non-functional T cell receptor beta variable 5-7", "gene_name": "TRBV5-7", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0C4DH35-1", "protein_name": "Probable non-functional immunoglobulin heavy variable 3-35", "gene_name": "IGHV3-35", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DTW3-1", "protein_name": "Probable non-functional immunoglobulin heavy variable 1-38-4", "gene_name": "IGHV1-38-4", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0A0MS02-1", "protein_name": "Probable non-functional T cell receptor gamma variable", "gene_name": "TRGV1", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A075B6H7-1", "protein_name": "Probable non-functional immunoglobulin kappa variable 3-7", "gene_name": "IGKV3-7", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A075B6S9-1", "protein_name": "Probable non-functional immunoglobulin kappa variable 1-37", "gene_name": "IGKV1-37", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A075B6H8-1", "protein_name": "Probable non-functional immunoglobulin kappa variable 1D-42", "gene_name": "IGKV1D-42", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A075B6L6-1", "protein_name": "Probable non-functional T cell receptor beta variable 7-3", "gene_name": "TRBV7-3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0A0MS06-1", "protein_name": "Probable non-functional T cell receptor beta variable 23-1", "gene_name": "TRBV23-1", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0C4DH30-1", "protein_name": "Probable non-functional immunoglobulin heavy variable 3-16", "gene_name": "IGHV3-16", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0A6YYK4-1", "protein_name": "Probable non-functional T cell receptor beta variable 7-1", "gene_name": "TRBV7-1", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0A0MS04-1", "protein_name": "Probable non-functional T cell receptor beta variable 6-7", "gene_name": "TRBV6-7", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A075B6J2-1", "protein_name": "Probable non-functional immunoglobulin lambda variable 2-33", "gene_name": "IGLV2-33", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A087X0K7-1", "protein_name": "Probable non-functional T cell receptor beta variable 17", "gene_name": "TRBV17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DSN7-1", "protein_name": "Probable non-functional immunoglobulin kappa variable 1D-37", "gene_name": "IGKV1D-37", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DTE2-1", "protein_name": "Probable non-functional immunoglobulin heavy variable 8-51-1", "gene_name": "IGHV8-51-1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DTE1-1", "protein_name": "Probable non-functional immunoglobulin heavy variable 3-38-3", "gene_name": "IGHV3-38-3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A075B6I7-1", "protein_name": "Probable non-functional immunoglobulin lambda variable 5-48", "gene_name": "IGLV5-48", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A075B6L2-1", "protein_name": "Probable non-functional T cell receptor gamma variable 11", "gene_name": "TRGV11", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A075B6I3-1", "protein_name": "Probable non-functional immunoglobulin lambda variable 11-55", "gene_name": "IGLV11-55", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A075B6I6-1", "protein_name": "Probable non-functional immunoglobulin lambda variable 1-50", "gene_name": "IGLV1-50", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0B4J1V7-1", "protein_name": "Probable non-functional immunoglobulin heavy variable 7-81", "gene_name": "IGHV7-81", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0A0MS00-1", "protein_name": "Probable non-functional immunoglobulin lambda variable 3-32", "gene_name": "IGLV3-32", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0C4DH36-1", "protein_name": "Probable non-functional immunoglobulin heavy variable 3-38", "gene_name": "IGHV3-38", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0A0MS01-1", "protein_name": "Probable non-functional T cell receptor gamma variable 10", "gene_name": "TRGV10", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0C4DH26-1", "protein_name": "Probable non-functional immunoglobulin kappa variable 6D-41", "gene_name": "IGKV6D-41", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "A0A075B6R9", "url": "https://www.uniprot.org/uniprotkb/A0A075B6R9" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9619395", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 28 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Open reading frames associated with cancer in the dark matter of the human genome.", "journal": "Cancer Genomics Proteomics", "date": "2014", "authors": "Delgado AP, Brandao P, Chapado MJ, Hamid S, Narayanan R", "reference": { "type": "PubMed", "id": "25048349", "url": "https://pubmed.ncbi.nlm.nih.gov/25048349" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8IXP5-1", "protein_name": "POU domain class 2-associating factor 2", "gene_name": "POU2AF2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q8IXP5", "url": "https://www.uniprot.org/uniprotkb/Q8IXP5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.25048349", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], 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Yuan Zibo, Yang Yingnan, Zhu Qingwei, Zhang Zhe, Guo Junwei, Wu Yanfang, Zhang Junyu, Huang Dongsheng, Tu Kangsheng, Hu Xiaoge", "reference": { "type": "PubMed", "id": "38308285", "url": "https://pubmed.ncbi.nlm.nih.gov/38308285" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O95832-1", "protein_name": "Claudin-1", "gene_name": "CLDN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NVE5-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 40", "gene_name": "USP40", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O95832", "url": "https://www.uniprot.org/uniprotkb/O95832" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.38308285", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", 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M, Yoo Lindsey G, Gal\u00e1n Mar\u00eda, Izquierdo Adriana, Medina-G\u00f3mez Gema, Herrero Laura, Corrales Patricia, Villarroya Francesc, Cereijo Rub\u00e9n, S\u00e1nchez-Infantes David", "reference": { "type": "PubMed", "id": "38375549", "url": "https://pubmed.ncbi.nlm.nih.gov/38375549" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O95832-1", "protein_name": "Claudin-1", "gene_name": "CLDN1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O95832", "url": "https://www.uniprot.org/uniprotkb/O95832" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.38375549", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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"o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", 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Mol. Cell. Cardiol.", "date": "1999", "authors": "Lamb F S, Clayton G H, Liu B X, Smith R L, Barna T J, Schutte B C", "reference": { "type": "PubMed", "id": "10198195", "url": "https://pubmed.ncbi.nlm.nih.gov/10198195" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P51797-1", "protein_name": "H(+)/Cl(-) exchange transporter 6", "gene_name": "CLCN6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51788-1", "protein_name": "Chloride channel protein 2", "gene_name": "CLCN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51790-1", "protein_name": "H(+)/Cl(-) exchange transporter 3", "gene_name": "CLCN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51795-2", "protein_name": "H(+)/Cl(-) exchange transporter 5", "gene_name": "CLCN5", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P51797", "url": "https://www.uniprot.org/uniprotkb/P51797" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10198195", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Complete genomic structure of the CLCN6 and CLCN7 putative chloride channel genes.", "journal": "Biochim. Biophys. 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "CLEC2A: a novel, alternatively spliced and skin-associated member of the NKC-encoded AICL-CD69-LLT1 family.", "journal": "Immunogenetics", "date": "2007", "authors": "Spreu J, Kienle EC, Schrage B, Steinle A", "reference": { "type": "PubMed", "id": "18046548", "url": "https://pubmed.ncbi.nlm.nih.gov/18046548" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q6UVW9-1", "protein_name": "C-type lectin domain family 2 member A", "gene_name": "CLEC2A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": 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modulator of human T-cell expansion.", "journal": "Blood", "date": "2008", "authors": "Huarte E, Cubillos-Ruiz JR, Nesbeth YC, Scarlett UK, Martinez DG, Engle XA, Rigby WF, Pioli PA, Guyre PM, Conejo-Garcia JR", "reference": { "type": "PubMed", "id": "18550855", "url": "https://pubmed.ncbi.nlm.nih.gov/18550855" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q6UVW9-1", "protein_name": "C-type lectin domain family 2 member A", "gene_name": "CLEC2A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q6UVW9", "url": "https://www.uniprot.org/uniprotkb/Q6UVW9" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.18550855", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": 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