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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A novel ADP-ribosylation like factor (ARL-6), interacts with the protein-conducting channel SEC61beta subunit.", "journal": "FEBS Lett.", "date": "1999", "authors": "Ingley E, Williams J H, Walker C E, Tsai S, Colley S, Sayer M S, Tilbrook P A, Sarna M, Beaumont J G, Klinken S P", "reference": { "type": "PubMed", "id": "10508919", "url": "https://pubmed.ncbi.nlm.nih.gov/10508919" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8BH07-1", "protein_name": "ADP-ribosylation factor-like protein 6-interacting protein 6", "gene_name": "Arl6ip6", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R5J9-1", "protein_name": "PRA1 family protein 3", "gene_name": "Arl6ip5", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9JKW0-1", "protein_name": "ADP-ribosylation factor-like protein 6-interacting protein 1", "gene_name": "Arl6ip1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O88848-1", "protein_name": "ADP-ribosylation factor-like protein 6", "gene_name": "Arl6", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9JM93-1", "protein_name": "ADP-ribosylation factor-like protein 6-interacting protein 4", "gene_name": "Arl6ip4", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8BH07", "url": "https://www.uniprot.org/uniprotkb/Q8BH07" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.10508919", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The small GTPase ADP-ribosylation factor 6 negatively regulates dendritic spine formation.", "journal": "FEBS letters", "date": "2005", "authors": "Miyazaki H, Yamazaki M, Watanabe H, Maehama T, Yokozeki T, Kanaho Y", "reference": { "type": "PubMed", "id": "16325184", "url": "https://pubmed.ncbi.nlm.nih.gov/16325184" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8BH07-1", "protein_name": "ADP-ribosylation factor-like protein 6-interacting protein 6", "gene_name": "Arl6ip6", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P62331-1", "protein_name": "ADP-ribosylation factor 6", "gene_name": "Arf6", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8BH07", "url": "https://www.uniprot.org/uniprotkb/Q8BH07" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.16325184", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Desrt, an AT-rich interaction domain family transcription factor gene, is an early marker for nephrogenic mesoderm and is expressed dynamically during mouse limb development.", "journal": "Mech. Dev.", "date": "2001", "authors": "Ristevski S, Tam PP, Kola I, Hertzog P", "reference": { "type": "PubMed", "id": "11404092", "url": "https://pubmed.ncbi.nlm.nih.gov/11404092" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8BM75-1", "protein_name": "AT-rich interactive domain-containing protein 5B", "gene_name": "Arid5b", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8BM75", "url": "https://www.uniprot.org/uniprotkb/Q8BM75" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.11404092", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Gene targeting of Desrt, a novel ARID class DNA-binding protein, causes growth retardation and abnormal development of reproductive organs.", "journal": "Genome Res.", "date": "2001", "authors": "Lahoud M H, Ristevski S, Venter D J, Jermiin L S, Bertoncello I, Zavarsek S, Hasthorpe S, Drago J, de Kretser D, Hertzog P J, Kola I", "reference": { "type": "PubMed", "id": "11483573", "url": "https://pubmed.ncbi.nlm.nih.gov/11483573" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8BM75-1", "protein_name": "AT-rich interactive domain-containing protein 5B", "gene_name": "Arid5b", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8BM75", "url": "https://www.uniprot.org/uniprotkb/Q8BM75" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.11483573", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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"journal": "Physiol. Genomics", "date": "2006", "authors": "Wilson Michael D, Cheung Joseph, Martindale Duane W, Scherer Stephen W, Koop Ben F", "reference": { "type": "PubMed", "id": "16926269", "url": "https://pubmed.ncbi.nlm.nih.gov/16926269" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8K3A9-1", "protein_name": "7SK snRNA methylphosphate capping enzyme", "gene_name": "Mepce", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q6IR42-1", "protein_name": "Zinc finger CW-type PWWP domain protein 1", "gene_name": "Zcwpw1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q921C1-1", "protein_name": "Gap junction gamma-3 protein", "gene_name": "Gjc3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D8C8-1", "protein_name": "Protein phosphatase 1 regulatory subunit 35", "gene_name": "Ppp1r35", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q6DKI7-1", "protein_name": "Transmembrane protein PVRIG", "gene_name": "PVRIG", "tax_name": "Human" } ], "species": [ { "name": 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "Activation of IGFBP4 via unconventional mechanism of miRNA attenuates metastasis of intrahepatic cholangiocarcinoma.", "journal": "Hepatology international", "date": "2024-02", "authors": "Tao Liye, Wang Yali, Shen Zefeng, Cai Jingwei, Zheng Junhao, Xia Shunjie, Lin Zhongjie, Wan Zhe, Qi Haiou, Jin Renan, Wang Ling, Xu Junjie, Liang Xiao", "reference": { "type": "PubMed", "id": "37349627", "url": "https://pubmed.ncbi.nlm.nih.gov/37349627" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P47879-1", "protein_name": "Insulin-like growth factor-binding protein 4", "gene_name": "Igfbp4", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P47879", "url": "https://www.uniprot.org/uniprotkb/P47879" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.37349627", 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Int.", "date": "1994", "authors": "Bethel C R, Vitullo J C, Miller R E, Aron D C", "reference": { "type": "PubMed", "id": "7531538", "url": "https://pubmed.ncbi.nlm.nih.gov/7531538" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P47879-1", "protein_name": "Insulin-like growth factor-binding protein 4", "gene_name": "Igfbp4", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P47879", "url": "https://www.uniprot.org/uniprotkb/P47879" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.7531538", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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Biol.", "date": "2000", "authors": "Panchin Y, Kelmanson I, Matz M, Lukyanov K, Usman N, Lukyanov S", "reference": { "type": "PubMed", "id": "10898987", "url": "https://pubmed.ncbi.nlm.nih.gov/10898987" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9JIP4-1", "protein_name": "Pannexin-1", "gene_name": "Panx1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9JIP4", "url": "https://www.uniprot.org/uniprotkb/Q9JIP4" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.10898987", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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"Pannexin 1 and pannexin 3 are glycoproteins that exhibit many distinct characteristics from the connexin family of gap junction proteins.", "journal": "Journal of cell science", "date": "2007", "authors": "Penuela S, Bhalla R, Gong XQ, Cowan KN, Celetti SJ, Cowan BJ, Bai D, Shao Q, Laird DW", "reference": { "type": "PubMed", "id": "17925379", "url": "https://pubmed.ncbi.nlm.nih.gov/17925379" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9JIP4-1", "protein_name": "Pannexin-1", "gene_name": "Panx1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q96QZ0-1", "protein_name": "Pannexin-3", "gene_name": "PANX3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8CEG0-1", "protein_name": "Pannexin-3", "gene_name": "Panx3", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9JIP4", "url": "https://www.uniprot.org/uniprotkb/Q9JIP4" } ], "common_name": "Mouse", "glygen_name": 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Neurochem.", "date": "2007", "authors": "Bourguignon LY, Gilad E, Peyrollier K, Brightman A, Swanson RA", "reference": { "type": "PubMed", "id": "17403031", "url": "https://pubmed.ncbi.nlm.nih.gov/17403031" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P63001-1", "protein_name": "Ras-related C3 botulinum toxin substrate 1", "gene_name": "Rac1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P15379-14", "protein_name": "CD44 antigen", "gene_name": "Cd44", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q60598-1", "protein_name": "Src substrate cortactin", "gene_name": "Cttn", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8BWW9-1", "protein_name": "Serine/threonine-protein kinase N2", "gene_name": "Pkn2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P63001", "url": "https://www.uniprot.org/uniprotkb/P63001" } ], "common_name": "Mouse", "glygen_name": "Mouse", 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"field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Rac1 deficiency in the forebrain results in neural progenitor reduction and microcephaly.", "journal": "Developmental biology", "date": "2009-01-01", "authors": "Chen Lei, Melendez Jaime, Campbell Kenneth, Kuan Chia-Yi, Zheng Yi", "reference": { "type": "PubMed", "id": "19007770", "url": "https://pubmed.ncbi.nlm.nih.gov/19007770" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P63001-1", "protein_name": "Ras-related C3 botulinum toxin substrate 1", "gene_name": "Rac1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P63001", "url": "https://www.uniprot.org/uniprotkb/P63001" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.19007770", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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"tax_name": "Mouse" }, { "uniprot_canonical_ac": "P35465-1", "protein_name": "Serine/threonine-protein kinase PAK 1", "gene_name": "Pak1", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q99PT1-1", "protein_name": "Rho GDP-dissociation inhibitor 1", "gene_name": "Arhgdia", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q6RUV5-1", "protein_name": "Ras-related C3 botulinum toxin substrate 1", "gene_name": "Rac1; Rac3", "tax_name": "Rat" }, { "uniprot_canonical_ac": "P60953-2", "protein_name": "Cell division control protein 42 homolog", "gene_name": "CDC42", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63000-1", "protein_name": "Ras-related C3 botulinum toxin substrate 1", "gene_name": "RAC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8VII8-1", "protein_name": "Mineralocorticoid receptor", "gene_name": "Nr3c2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P08235-1", "protein_name": "Mineralocorticoid receptor", "gene_name": "NR3C2", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P63001", "url": "https://www.uniprot.org/uniprotkb/P63001" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 12, "end_pos": 12, "sequence_org": "G", "sequence_mut": "V", "comment": "Constitutively active. 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No effect on NR3C2 transcriptional activity.", "evidence": [ { "database": "UniProtKB", "id": "P60953", "url": "https://www.uniprot.org/uniprotkb/P60953" }, { "database": "PubMed", "id": "19029984", "url": "https://pubmed.ncbi.nlm.nih.gov/19029984" }, { "database": "PubMed", "id": "14978216", "url": "https://pubmed.ncbi.nlm.nih.gov/14978216" }, { "database": "PubMed", "id": "10954424", "url": "https://pubmed.ncbi.nlm.nih.gov/10954424" } ], "uniprot_canonical_ac": "P60953-2" }, { "start_pos": 17, "end_pos": 17, "sequence_org": "T", "sequence_mut": "N", "comment": "Constitutively inactive. Does not interact with PARD6 proteins. Inhibits filopodia formation. No effect on NR3C2 transcriptional activity. Abolishes polymerization of SEPTIN12.", "evidence": [ { "database": "UniProtKB", "id": "P60953", "url": "https://www.uniprot.org/uniprotkb/P60953" }, { "database": "PubMed", "id": "11260256", "url": "https://pubmed.ncbi.nlm.nih.gov/11260256" }, { "database": "PubMed", "id": "19029984", "url": "https://pubmed.ncbi.nlm.nih.gov/19029984" }, { "database": "PubMed", "id": "14978216", "url": "https://pubmed.ncbi.nlm.nih.gov/14978216" }, { "database": "PubMed", "id": "30189608", "url": "https://pubmed.ncbi.nlm.nih.gov/30189608" } ], "uniprot_canonical_ac": "P60953-2" }, { "start_pos": 12, "end_pos": 12, "sequence_org": "G", "sequence_mut": "V", "comment": "Constitutively active. Interacts with PARD6 proteins. Increases nuclear localization and up-regulates transcriptional activity of NR3C2. Doesn't interact with CYRIB. Increases interaction with GARRE1.", "evidence": [ { "database": "UniProtKB", "id": "P63000", "url": "https://www.uniprot.org/uniprotkb/P63000" }, { "database": "PubMed", "id": "11260256", "url": "https://pubmed.ncbi.nlm.nih.gov/11260256" }, { "database": "PubMed", "id": "19029984", "url": "https://pubmed.ncbi.nlm.nih.gov/19029984" }, { "database": "PubMed", "id": "30250061", "url": "https://pubmed.ncbi.nlm.nih.gov/30250061" }, { "database": "PubMed", "id": "31871319", "url": "https://pubmed.ncbi.nlm.nih.gov/31871319" } ], "uniprot_canonical_ac": "P63000-1" }, { "start_pos": 17, "end_pos": 17, "sequence_org": "T", "sequence_mut": "N", "comment": "Constitutively inactivated. Abolishes interaction with PARD6 proteins. No effect on NR3C2 transcriptional activity. No interaction with PPP5C. Doesn't activate PPP5C phosphatase activity and translocate PPP5C to the plasma membrane. Doesn't interact with CYRIB.", "evidence": [ { "database": "UniProtKB", "id": "P63000", "url": "https://www.uniprot.org/uniprotkb/P63000" }, { "database": "PubMed", "id": "11260256", "url": "https://pubmed.ncbi.nlm.nih.gov/11260256" }, { "database": "PubMed", "id": "19029984", "url": "https://pubmed.ncbi.nlm.nih.gov/19029984" }, { "database": "PubMed", "id": "30250061", "url": "https://pubmed.ncbi.nlm.nih.gov/30250061" }, { "database": "PubMed", "id": "19948726", "url": "https://pubmed.ncbi.nlm.nih.gov/19948726" } ], "uniprot_canonical_ac": "P63000-1" } ], "record_id": "pubmed.19029984", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 8 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { 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"sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The F-BAR domain of srGAP2 induces membrane protrusions required for neuronal migration and morphogenesis.", "journal": "Cell", "date": "2009", "authors": "Guerrier S, Coutinho-Budd J, Sassa T, Gresset A, Jordan NV, Chen K, Jin WL, Frost A, Polleux F", "reference": { "type": "PubMed", "id": "19737524", "url": "https://pubmed.ncbi.nlm.nih.gov/19737524" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P63001-1", "protein_name": "Ras-related C3 botulinum toxin substrate 1", "gene_name": "Rac1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q91Z67-1", "protein_name": "SLIT-ROBO Rho GTPase-activating protein 2", "gene_name": "Srgap2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P63001", "url": "https://www.uniprot.org/uniprotkb/P63001" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 527, "end_pos": 527, "sequence_org": "R", "sequence_mut": "L", "comment": "Abolished RAC1 GTPase activity. 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