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[et al.]", "date": "2024-06", "authors": "Cheng Wen-Lin, Chao Sheng-Ping, Zhao Fang, Cai Huan-Huan, Zeng Ziyue, Cao Jian-Lei, Jin Zhili, Deng Ke-Qiong, Hu Xiaorong, Wang Hairong, Lu Zhibing", "reference": { "type": "PubMed", "id": "38642079", "url": "https://pubmed.ncbi.nlm.nih.gov/38642079" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P70191-1", "protein_name": "TNF receptor-associated factor 5", "gene_name": "Traf5", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O00463-1", "protein_name": "TNF receptor-associated factor 5", "gene_name": "TRAF5", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P70191", "url": "https://www.uniprot.org/uniprotkb/P70191" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.38642079", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "TRAF5, a novel tumor necrosis factor receptor-associated factor family protein, mediates CD40 signaling.", "journal": "Proc. 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[] } ] }, { "title": "Structural basis for phosphatidylinositol phosphate kinase type Igamma binding to talin at focal adhesions.", "journal": "J. Biol. Chem.", "date": "2005", "authors": "de Pereda Jose M, Wegener Kate L, Santelli Eugenio, Bate Neil, Ginsberg Mark H, Critchley David R, Campbell Iain D, Liddington Robert C", "reference": { "type": "PubMed", "id": "15623515", "url": "https://pubmed.ncbi.nlm.nih.gov/15623515" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P26039-1", "protein_name": "Talin-1", "gene_name": "Tln1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O70161-1", "protein_name": "Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma", "gene_name": "Pip5k1c", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P26039", "url": "https://www.uniprot.org/uniprotkb/P26039" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.15623515", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": 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Chem.", "date": "2010", "authors": "Gingras AR, Bate N, Goult BT, Patel B, Kopp PM, Emsley J, Barsukov IL, Roberts GC, Critchley DR", "reference": { "type": "PubMed", "id": "20610383", "url": "https://pubmed.ncbi.nlm.nih.gov/20610383" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P26039-1", "protein_name": "Talin-1", "gene_name": "Tln1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9ERE8-1", "protein_name": "Talin rod domain-containing protein 1", "gene_name": "Tlnrd1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q64727-1", "protein_name": "Vinculin", "gene_name": "Vcl", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P12003-2", "protein_name": "Vinculin", "gene_name": "VCL", "tax_name": "Chicken" }, { "uniprot_canonical_ac": "P54939-1", "protein_name": "Talin-1", "gene_name": "TLN1", "tax_name": "Chicken" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P26039", "url": 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Abolishes binding to TLN1 and impairs CMSC assembly at the focal adhesion rims leading to increased microtubule growth rate at the cell periphery; when associated with A-41, A-42 and A-44.", "evidence": [ { "database": "UniProtKB", "id": "Q14678", "url": "https://www.uniprot.org/uniprotkb/Q14678" }, { "database": "PubMed", "id": "16968744", "url": "https://pubmed.ncbi.nlm.nih.gov/16968744" }, { "database": "PubMed", "id": "27410476", "url": "https://pubmed.ncbi.nlm.nih.gov/27410476" } ], "uniprot_canonical_ac": "Q14678-1" }, { "start_pos": 44, "end_pos": 44, "sequence_org": "D", "sequence_mut": "A", "comment": "Abolishes binding to TLN1 and impairs CMSC assembly at the focal adhesion rims leading to increased microtubule growth rate at the cell periphery; when associated with A-41, A-42 and A-43.", "evidence": [ { "database": "UniProtKB", "id": "Q14678", "url": "https://www.uniprot.org/uniprotkb/Q14678" }, { "database": "PubMed", "id": "27410476", "url": "https://pubmed.ncbi.nlm.nih.gov/27410476" } ], "uniprot_canonical_ac": "Q14678-1" } ], "record_id": "pubmed.27410476", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Interaction of focal adhesion kinase with cytoskeletal protein talin.", "journal": "J. Biol. Chem.", "date": "1995", "authors": "Chen H C, Appeddu P A, Parsons J T, Hildebrand J D, Schaller M D, Guan J L", "reference": { "type": "PubMed", "id": "7622520", "url": "https://pubmed.ncbi.nlm.nih.gov/7622520" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P26039-1", "protein_name": "Talin-1", "gene_name": "Tln1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P34152-3", "protein_name": "Focal adhesion kinase 1", "gene_name": "Ptk2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P26039", "url": "https://www.uniprot.org/uniprotkb/P26039" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.7622520", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Tubulin tyrosination is a major factor affecting the recruitment of CAP-Gly proteins at microtubule plus ends.", "journal": "J. Cell Biol.", "date": "2006", "authors": "Peris L, Thery M, Faure J, Saoudi Y, Lafanechere L, Chilton JK, Gordon-Weeks P, Galjart N, Bornens M, Wordeman L, Wehland J, Andrieux A, Job D", "reference": { "type": "PubMed", "id": "16954346", "url": "https://pubmed.ncbi.nlm.nih.gov/16954346" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q922J3-1", "protein_name": "CAP-Gly domain-containing linker protein 1", "gene_name": "Clip1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9Z0H8-1", "protein_name": "CAP-Gly domain-containing linker protein 2", "gene_name": "Clip2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P05213-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "Tuba1b", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P68373-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "Tuba1c", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P05214-1", "protein_name": "Tubulin alpha-3 chain", "gene_name": "Tuba3a; Tuba3b", 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"glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"CLIP170 inhibits the metastasis and EMT of papillary thyroid cancer through the TGF-\u03b2 pathway.", "journal": "Medical oncology (Northwood, London, England)", "date": "2024-05-05", "authors": "Ma Binyuan, Xu Yaxin, Gao Hongwei, Yang Yinggui, Pan Yunyan, You Chongge", "reference": { "type": "PubMed", "id": "38705933", "url": "https://pubmed.ncbi.nlm.nih.gov/38705933" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q922J3-1", "protein_name": "CAP-Gly domain-containing linker protein 1", "gene_name": "Clip1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P30622-3", "protein_name": "CAP-Gly domain-containing linker protein 1", "gene_name": "CLIP1", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q922J3", "url": "https://www.uniprot.org/uniprotkb/Q922J3" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": 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Yoshizawa I, Kamei Y, Mariggio S, Okamoto K, Maeda M, Nogusa Y, Fujioka Y, Izumi T, Ogawa Y, Shiro Y, Wada M, Kato N, Corda D, Yanaka N", "reference": { "type": "PubMed", "id": "20576599", "url": "https://pubmed.ncbi.nlm.nih.gov/20576599" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8C0L9-1", "protein_name": "Glycerophosphocholine phosphodiesterase GPCPD1", "gene_name": "Gpcpd1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8C0L9", "url": "https://www.uniprot.org/uniprotkb/Q8C0L9" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.20576599", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", 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Cell physiology", "date": "2019", "authors": "Okazaki Y, Nakamura K, Takeda S, Yoshizawa I, Yoshida F, Ohshima N, Izumi T, Klein JD, Kumrungsee T, Sands JM, Yanaka N", "reference": { "type": "PubMed", "id": "30462540", "url": "https://pubmed.ncbi.nlm.nih.gov/30462540" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8C0L9-1", "protein_name": "Glycerophosphocholine phosphodiesterase GPCPD1", "gene_name": "Gpcpd1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8C0L9", "url": "https://www.uniprot.org/uniprotkb/Q8C0L9" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.30462540", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], 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Hagelkruys Astrid, Tavernier Genevi\u00e8ve, Bourlier Virginie, Knauf Claude, Krebs Michael, Kautzky-Willer Alexandra, Moro Cedric, Krssak Martin, Orthofer Michael, Penninger Josef M", "reference": { "type": "PubMed", "id": "38238601", "url": "https://pubmed.ncbi.nlm.nih.gov/38238601" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8C0L9-1", "protein_name": "Glycerophosphocholine phosphodiesterase GPCPD1", "gene_name": "Gpcpd1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9NPB8-1", "protein_name": "Glycerophosphocholine phosphodiesterase GPCPD1", "gene_name": "GPCPD1", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8C0L9", "url": "https://www.uniprot.org/uniprotkb/Q8C0L9" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.38238601", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": 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Characterization and epitope-mapping of a novel flotillin-1 monoclonal antibody probe.", "journal": "J. Biol. Chem.", "date": "1999", "authors": "Volonte D, Galbiati F, Li S, Nishiyama K, Okamoto T, Lisanti M P", "reference": { "type": "PubMed", "id": "10212252", "url": "https://pubmed.ncbi.nlm.nih.gov/10212252" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O08917-1", "protein_name": "Flotillin-1", "gene_name": "Flot1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q60634-1", "protein_name": "Flotillin-2", "gene_name": "Flot2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "O08917", "url": "https://www.uniprot.org/uniprotkb/O08917" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.10212252", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "In Vivo Function of the Lipid Raft Protein Flotillin-1 during CD8(+) T Cell-Mediated Host Surveillance.", "journal": "Journal of immunology (Baltimore, Md. : 1950)", "date": "2019", "authors": "Ficht X, Ruef N, Stolp B, Samson GPB, Moalli F, Page N, Merkler D, Nichols BJ, Diz-Munoz A, Legler DF, Niggli V, Stein JV", "reference": { "type": "PubMed", "id": "31548330", "url": "https://pubmed.ncbi.nlm.nih.gov/31548330" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O08917-1", 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Biol. Chem.", "date": "1997", "authors": "Bickel P E, Scherer P E, Schnitzer J E, Oh P, Lisanti M P, Lodish H F", "reference": { "type": "PubMed", "id": "9153235", "url": "https://pubmed.ncbi.nlm.nih.gov/9153235" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O08917-1", "protein_name": "Flotillin-1", "gene_name": "Flot1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q60634-1", "protein_name": "Flotillin-2", "gene_name": "Flot2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "O08917", "url": "https://www.uniprot.org/uniprotkb/O08917" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.9153235", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } 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Biol. Cell", "date": "2002", "authors": "Cross MJ, Lu L, Magnusson P, Nyqvist D, Holmqvist K, Welsh M, Claesson-Welsh L", "reference": { "type": "PubMed", "id": "12181353", "url": "https://pubmed.ncbi.nlm.nih.gov/12181353" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P16092-1", "protein_name": "Fibroblast growth factor receptor 1", "gene_name": "Fgfr1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8C180-1", "protein_name": "Fibroblast growth factor receptor substrate 2", "gene_name": "Frs2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q15464-1", "protein_name": "SH2 domain-containing adapter protein B", "gene_name": "SHB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11362-1", "protein_name": "Fibroblast growth factor receptor 1", "gene_name": "FGFR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35235-2", "protein_name": "Tyrosine-protein phosphatase non-receptor type 11", "gene_name": "Ptpn11", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q6PD21-1", "protein_name": "SH2 domain-containing adapter protein B", "gene_name": "Shb", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P16092", "url": "https://www.uniprot.org/uniprotkb/P16092" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 766, "end_pos": 766, "sequence_org": "Y", "sequence_mut": "F", "comment": "Abolishes interaction with PLCG1 and SHB. 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Commun.", "date": "1991", "authors": "Kouhara H, Kasayama S, Saito H, Matsumoto K, Sato B", "reference": { "type": "PubMed", "id": "1708247", "url": "https://pubmed.ncbi.nlm.nih.gov/1708247" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P16092-1", "protein_name": "Fibroblast growth factor receptor 1", "gene_name": "Fgfr1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P16092", "url": "https://www.uniprot.org/uniprotkb/P16092" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.1708247", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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Genet.", "date": "1999", "authors": "Bardoni B, Schenck A, Mandel JL", "reference": { "type": "PubMed", "id": "10556305", "url": "https://pubmed.ncbi.nlm.nih.gov/10556305" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P35922-1", "protein_name": "Fragile X messenger ribonucleoprotein 1", "gene_name": "Fmr1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9UHK0-1", "protein_name": "FMR1-interacting protein NUFIP1", "gene_name": "NUFIP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06787-1", "protein_name": "Fragile X messenger ribonucleoprotein 1", "gene_name": "FMR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9QXX8-1", "protein_name": "FMR1-interacting protein NUFIP1", "gene_name": "Nufip1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P35922", "url": "https://www.uniprot.org/uniprotkb/P35922" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.10556305", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Isolation of an FMRP-associated messenger ribonucleoprotein particle and identification of nucleolin and the fragile X-related proteins as components of the complex.", "journal": "Mol. 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"o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A highly conserved protein family interacting with the fragile X mental retardation protein (FMRP) and displaying selective interactions with FMRP-related proteins FXR1P and FXR2P.", "journal": "Proc. Natl. Acad. Sci. U.S.A.", "date": "2001", "authors": "Schenck A, Bardoni B, Moro A, Bagni C, Mandel JL", "reference": { "type": "PubMed", "id": "11438699", "url": "https://pubmed.ncbi.nlm.nih.gov/11438699" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P35922-1", "protein_name": "Fragile X messenger ribonucleoprotein 1", "gene_name": "Fmr1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9WVR4-1", "protein_name": "RNA-binding protein FXR2", "gene_name": "Fxr2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q61584-1", "protein_name": "RNA-binding protein FXR1", "gene_name": "Fxr1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9VF87-1", "protein_name": "Cytoplasmic FMR1-interacting protein", "gene_name": "Cyfip", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7TMB8-1", "protein_name": "Cytoplasmic FMR1-interacting protein 1", "gene_name": "Cyfip1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q5SQX6-1", "protein_name": "Cytoplasmic FMR1-interacting protein 2", "gene_name": "Cyfip2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q90YM8-1", "protein_name": "Cytoplasmic FMR1-interacting protein 1 homolog", "gene_name": "cyfip1", "tax_name": "Zebrafish" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P35922", "url": "https://www.uniprot.org/uniprotkb/P35922" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.11438699", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 7 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] } ]