[ { "title": "Patellin1, a novel Sec14-like protein, localizes to the cell plate and binds phosphoinositides.", "journal": "Plant Physiol.", "date": "2004", "authors": "Peterman T Kaye, Ohol Yamini M, McReynolds Lisa J, Luna Elizabeth J", "reference": { "type": "PubMed", "id": "15466235", "url": "https://pubmed.ncbi.nlm.nih.gov/15466235" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M0R2-1", "protein_name": "Patellin-5", "gene_name": "PATL5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCU1-1", "protein_name": "Patellin-6", "gene_name": "PATL6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q56ZI2-1", "protein_name": "Patellin-2", "gene_name": "PATL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94C59-1", "protein_name": "Patellin-4", "gene_name": "PATL4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q56WK6-1", "protein_name": "Patellin-1", "gene_name": "PATL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q56Z59-1", "protein_name": "Patellin-3", "gene_name": "PATL3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M0R2", "url": "https://www.uniprot.org/uniprotkb/Q9M0R2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15466235", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Differential extraction and protein sequencing reveals major differences in patterns of primary cell wall proteins from plants.", "journal": "J. Biol. Chem.", "date": "1997", "authors": "Robertson D, Mitchell G P, Gilroy J S, Gerrish C, Bolwell G P, Slabas A R", "reference": { "type": "PubMed", "id": "9188482", "url": "https://pubmed.ncbi.nlm.nih.gov/9188482" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M069-1", "protein_name": "Glucan endo-1,3-beta-glucosidase 7", "gene_name": "T4L20.60; T4L20_60", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O48818-1", "protein_name": "Expansin-A4", "gene_name": "EXPA4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C9H5-1", "protein_name": "Endoglucanase 9", "gene_name": "CEL3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O65351-1", "protein_name": "Subtilisin-like protease SBT1.7", "gene_name": "SBT1.7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P42761-1", "protein_name": "Glutathione S-transferase F10", "gene_name": "GSTF10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P42813-1", "protein_name": "Ribonuclease 1", "gene_name": "RNS1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S7Y7-1", "protein_name": "Alpha-xylosidase 1", "gene_name": "XYL1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M069", "url": "https://www.uniprot.org/uniprotkb/Q9M069" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.9188482", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 7 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The GRAS gene family in Arabidopsis: sequence characterization and basic expression analysis of the SCARECROW-LIKE genes.", "journal": "Plant J.", "date": "1999", "authors": "Pysh L D, Wysocka-Diller J W, Camilleri C, Bouchez D, Benfey P N", "reference": { "type": "PubMed", "id": "10341448", "url": "https://pubmed.ncbi.nlm.nih.gov/10341448" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M0M5-1", "protein_name": "Scarecrow-like protein 13", "gene_name": "SCL13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SDQ3-1", "protein_name": "Scarecrow-like protein 1", "gene_name": "SCL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GXW1-1", "protein_name": "DELLA protein RGL2", "gene_name": "RGL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LPR8-1", "protein_name": "Scarecrow-like protein 3", "gene_name": "SCL3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8H125-1", "protein_name": "Scarecrow-like protein 5", "gene_name": "SCL5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCR0-1", "protein_name": "Scarecrow-like protein 7", "gene_name": "SCL7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XE58-1", "protein_name": "Scarecrow-like protein 14", "gene_name": "SCL14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80933-1", "protein_name": "Scarecrow-like protein 9", "gene_name": "SCL9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81316-1", "protein_name": "Scarecrow-like protein 6", "gene_name": "SCL6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LTI5-1", "protein_name": "Scarecrow-like protein 11", "gene_name": "SCL11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C8Y3-1", "protein_name": "DELLA protein RGL1", "gene_name": "RGL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FYR7-1", "protein_name": "Scarecrow-like protein 8", "gene_name": "SCL8", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M0M5", "url": "https://www.uniprot.org/uniprotkb/Q9M0M5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.10341448", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 12 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The GRAS protein SCL13 is a positive regulator of phytochrome-dependent red light signaling, but can also modulate phytochrome A responses.", "journal": "Molecular genetics and genomics : MGG", "date": "2006-07", "authors": "Torres-Galea Patricia, Huang Li-Fang, Chua Nam-Hai, Bolle Cordelia", "reference": { "type": "PubMed", "id": "16680434", "url": "https://pubmed.ncbi.nlm.nih.gov/16680434" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M0M5-1", "protein_name": "Scarecrow-like protein 13", "gene_name": "SCL13", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M0M5", "url": "https://www.uniprot.org/uniprotkb/Q9M0M5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16680434", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Transcriptional and posttranscriptional regulation of transcription factor expression in Arabidopsis roots.", "journal": "Proc. Natl. Acad. Sci. U.S.A.", "date": "2006", "authors": "Lee Ji-Young, Colinas Juliette, Wang Jean Y, Mace Daniel, Ohler Uwe, Benfey Philip N", "reference": { "type": "PubMed", "id": "16581911", "url": "https://pubmed.ncbi.nlm.nih.gov/16581911" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M0X8-1", "protein_name": "Transcription factor bHLH114", "gene_name": "BHLH114", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9MA75-1", "protein_name": "Transcription factor VIP1", "gene_name": "VIP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZ22-1", "protein_name": "Transcription factor bHLH103", "gene_name": "BHLH103", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93VY3-1", "protein_name": "NAC domain-containing protein 72", "gene_name": "NAC072; RD26", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O65508-1", "protein_name": "NAC domain-containing protein 76", "gene_name": "NAC076", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C8W9-1", "protein_name": "NAC domain-containing protein 30", "gene_name": "NAC030", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LJW3-1", "protein_name": "NAC domain-containing protein 59", "gene_name": "NAC59", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSQ3-1", "protein_name": "Transcription factor LRL3", "gene_name": "LRL3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6R053-1", "protein_name": "Transcription factor MYB56", "gene_name": "MYB56", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LXV2-1", "protein_name": "Transcription factor MYB46", "gene_name": "MYB46", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M0X8", "url": "https://www.uniprot.org/uniprotkb/Q9M0X8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } 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"total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Glutathione peroxidase genes in Arabidopsis are ubiquitous and regulated by abiotic stresses through diverse signaling pathways.", "journal": "Plant J.", "date": "2003", "authors": "Rodriguez Milla Miguel A, Maurer Alberto, Rodriguez Huete Alicia, Gustafson J Perry", "reference": { "type": "PubMed", "id": "14617062", "url": "https://pubmed.ncbi.nlm.nih.gov/14617062" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SZ54-1", "protein_name": "Putative glutathione peroxidase 7, chloroplastic", "gene_name": "GPX7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P52032-1", "protein_name": "Phospholipid hydroperoxide glutathione peroxidase 1, chloroplastic", "gene_name": "GPX1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LYB4-1", "protein_name": "Probable glutathione peroxidase 5", "gene_name": "GPX5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22850-1", "protein_name": "Probable glutathione peroxidase 3, mitochondrial", "gene_name": "GPX3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O04922-1", "protein_name": "Probable glutathione peroxidase 2", "gene_name": "GPX2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O48646-1", "protein_name": "Probable phospholipid hydroperoxide glutathione peroxidase 6, mitochondrial", "gene_name": "GPX6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L910-1", "protein_name": "Probable glutathione peroxidase 4", "gene_name": "GPX4", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SZ54", "url": "https://www.uniprot.org/uniprotkb/Q9SZ54" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.14617062", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 7 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", 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}, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Phylogenomic analysis of the receptor-like proteins of rice and Arabidopsis.", "journal": "Plant Physiol.", "date": "2005", "authors": "Fritz-Laylin Lillian K, Krishnamurthy Nandini, T\u00f6r Mahmut, Sj\u00f6lander Kimmen V, Jones Jonathan D G", "reference": { "type": "PubMed", "id": "15955925", "url": "https://pubmed.ncbi.nlm.nih.gov/15955925" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SVN2-1", "protein_name": "Receptor-like protein 47", "gene_name": "RLP47", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4HWL3-1", "protein_name": "Receptor-like protein 4", "gene_name": "RLP4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SHI3-1", "protein_name": "Receptor-like protein 2", "gene_name": "RLP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LJW7-1", "protein_name": "Receptor-like protein 43", "gene_name": "RLP43", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LRW9-1", "protein_name": "Receptor-like protein 40", "gene_name": "RLP40", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LS79-1", "protein_name": "Receptor-like protein 38", "gene_name": "RLP38", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LS80-1", "protein_name": "Receptor-like protein 37", "gene_name": "RLP37", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JTU7-1", "protein_name": "Receptor-like protein 48", "gene_name": "RLP48", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SRL2-1", "protein_name": "Receptor-like protein 34", "gene_name": "RLP34", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M2Y3-1", "protein_name": "Receptor-like protein 44", "gene_name": "RLP44", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SKK2-1", "protein_name": "Receptor like protein 21", "gene_name": "RLP21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M9X0-1", "protein_name": "Receptor-like protein 32", "gene_name": "RLP32", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S9U3-1", "protein_name": "Receptor-like protein 53", "gene_name": "RLP53", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJH6-1", "protein_name": "Receptor like protein 29", "gene_name": "RLP29", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SKK5-1", "protein_name": "Receptor-like protein 20", "gene_name": "RLP20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SLI6-1", "protein_name": "Putative receptor-like protein 8", "gene_name": "RLP8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SRL7-1", "protein_name": "Receptor-like protein 35", "gene_name": "RLP35", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SVM3-1", "protein_name": "Receptor-like protein 49", "gene_name": "RLP49", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZUK7-1", "protein_name": "Receptor-like protein 18", "gene_name": "RLP18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A0A1P8ATR9-1", "protein_name": "Receptor-like protein 9b", "gene_name": "RLP9B; RLP9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q1PEN0-1", "protein_name": "Receptor-like protein 36", "gene_name": "RLP36", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LNV9-1", "protein_name": "Receptor-like protein 1", "gene_name": "RLP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FK66-1", "protein_name": "Receptor-like protein 55", "gene_name": "RLP55", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SHI4-1", "protein_name": "Receptor-like protein 3", "gene_name": "RLP3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J9A8-1", "protein_name": "Receptor-like protein 45", "gene_name": "RLP45", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K4T3-1", "protein_name": "Receptor-like protein 56", "gene_name": "RLP56", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49325-1", "protein_name": "Receptor like protein 28", "gene_name": "RLP28", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RX63-1", "protein_name": "Receptor-like protein 31", "gene_name": "RLP31", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93YT3-1", "protein_name": "Receptor-like protein 50", "gene_name": "RLP50", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C637-1", "protein_name": "Receptor-like protein 6", "gene_name": "RLP6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C9H6-1", "protein_name": "Receptor-like protein 11", "gene_name": "RLP11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C6A6-1", "protein_name": "Receptor-like protein 13", "gene_name": "RLP13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C699-1", "protein_name": "Receptor-like protein 7", "gene_name": "RLP7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C6A8-1", "protein_name": "Receptor-like protein 15", "gene_name": "RLP15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FH86-1", "protein_name": "Receptor-like protein 57", "gene_name": "RLP57", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4HTV4-1", "protein_name": "Receptor-like protein 14", "gene_name": "RLP14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4HTV6-1", "protein_name": "Putative receptor-like protein 16", "gene_name": "RLP16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4I9S3-1", "protein_name": "Receptor-like protein 9a", "gene_name": "RLP9A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IUU1-1", "protein_name": "Receptor like protein 27", "gene_name": "RLP27", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J7T6-1", "protein_name": "Receptor-like protein 39", "gene_name": "RLP39", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J8G2-1", "protein_name": "Receptor-like protein 33", "gene_name": "RLP33", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JGB6-1", "protein_name": "Receptor-like protein 46", "gene_name": "RLP46", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4KHA2-1", "protein_name": "Receptor-like protein 54", "gene_name": "RLP54", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O48763-1", "protein_name": "Putative receptor like protein 25", "gene_name": "RLP25", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O48851-1", "protein_name": "Receptor like protein 22", "gene_name": "RLP22", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49328-1", "protein_name": "Receptor like protein 26", "gene_name": "RLP26", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49329-1", "protein_name": "Receptor like protein 24", "gene_name": "RLP24", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O48849-1", "protein_name": "Receptor like protein 23", "gene_name": "RLP23", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80809-1", "protein_name": "Receptor-like protein CLAVATA2", "gene_name": "CLV2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LJS0-1", "protein_name": "Receptor-like protein 42", "gene_name": "RLP42", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q7FZR1-1", "protein_name": "Receptor-like protein 52", "gene_name": "RLP52", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C9H7-1", "protein_name": "Receptor-like protein 12", "gene_name": "RLP12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LJS2-1", "protein_name": "Receptor-like protein 41", "gene_name": "RLP41", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZUK3-1", "protein_name": "Receptor-like protein 19", "gene_name": "RLP19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9MA83-1", "protein_name": "Receptor-like protein 30", "gene_name": "RLP30", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SN38-1", "protein_name": "Receptor-like protein 51", "gene_name": "RLP51", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SSD1-1", "protein_name": "Protein TOO MANY MOUTHS", "gene_name": "TMM", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SVN2", "url": "https://www.uniprot.org/uniprotkb/Q9SVN2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15955925", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 57 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A genome-wide functional investigation into the roles of receptor-like proteins in Arabidopsis.", "journal": "Plant Physiol.", "date": "2008", "authors": "Wang Guodong, Ellendorff Ursula, Kemp Ben, Mansfield John W, Forsyth Alec, Mitchell Kathy, Bastas Kubilay, Liu Chun-Ming, Woods-T\u00f6r Alison, Zipfel Cyril, de Wit Pierre J G M, Jones Jonathan D G, T\u00f6r Mahmut, Thomma Bart P H J", "reference": { "type": "PubMed", "id": "18434605", "url": "https://pubmed.ncbi.nlm.nih.gov/18434605" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SVN2-1", "protein_name": "Receptor-like protein 47", "gene_name": "RLP47", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4HWL3-1", "protein_name": "Receptor-like protein 4", "gene_name": "RLP4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SHI3-1", "protein_name": "Receptor-like protein 2", "gene_name": "RLP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LJW7-1", "protein_name": "Receptor-like protein 43", "gene_name": "RLP43", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LRW9-1", "protein_name": "Receptor-like protein 40", "gene_name": "RLP40", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LS79-1", "protein_name": "Receptor-like protein 38", "gene_name": "RLP38", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LS80-1", "protein_name": "Receptor-like protein 37", "gene_name": "RLP37", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JTU7-1", "protein_name": "Receptor-like protein 48", "gene_name": "RLP48", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SRL2-1", "protein_name": "Receptor-like protein 34", "gene_name": "RLP34", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M2Y3-1", "protein_name": "Receptor-like protein 44", "gene_name": "RLP44", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SKK2-1", "protein_name": "Receptor like protein 21", "gene_name": "RLP21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M9X0-1", "protein_name": "Receptor-like protein 32", "gene_name": "RLP32", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S9U3-1", "protein_name": "Receptor-like protein 53", "gene_name": "RLP53", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJH6-1", "protein_name": "Receptor like protein 29", "gene_name": "RLP29", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SKK5-1", "protein_name": "Receptor-like protein 20", "gene_name": "RLP20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SLI6-1", "protein_name": "Putative receptor-like protein 8", "gene_name": "RLP8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SRL7-1", "protein_name": "Receptor-like protein 35", "gene_name": "RLP35", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XID2-1", "protein_name": "Receptor-like protein 5", "gene_name": "RLP5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SVM3-1", "protein_name": "Receptor-like protein 49", "gene_name": "RLP49", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZUK7-1", "protein_name": "Receptor-like protein 18", "gene_name": "RLP18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A0A1P8ATR9-1", "protein_name": "Receptor-like protein 9b", "gene_name": "RLP9B; RLP9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q1PEN0-1", "protein_name": "Receptor-like protein 36", "gene_name": "RLP36", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LNV9-1", "protein_name": "Receptor-like protein 1", "gene_name": "RLP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FK66-1", "protein_name": "Receptor-like protein 55", "gene_name": "RLP55", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SHI4-1", "protein_name": "Receptor-like protein 3", "gene_name": "RLP3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J9A8-1", "protein_name": "Receptor-like protein 45", "gene_name": "RLP45", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K4T3-1", "protein_name": "Receptor-like protein 56", "gene_name": "RLP56", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49325-1", "protein_name": "Receptor like protein 28", "gene_name": "RLP28", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RX63-1", "protein_name": "Receptor-like protein 31", "gene_name": "RLP31", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93YT3-1", "protein_name": "Receptor-like protein 50", "gene_name": "RLP50", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C637-1", "protein_name": "Receptor-like protein 6", "gene_name": "RLP6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C9H6-1", "protein_name": "Receptor-like protein 11", "gene_name": "RLP11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C6A6-1", "protein_name": "Receptor-like protein 13", "gene_name": "RLP13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C699-1", "protein_name": "Receptor-like protein 7", "gene_name": "RLP7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C6A8-1", "protein_name": "Receptor-like protein 15", "gene_name": "RLP15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FH86-1", "protein_name": "Receptor-like protein 57", "gene_name": "RLP57", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4HTV4-1", "protein_name": "Receptor-like protein 14", "gene_name": "RLP14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4HTV6-1", "protein_name": "Putative receptor-like protein 16", "gene_name": "RLP16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4I9S3-1", "protein_name": "Receptor-like protein 9a", "gene_name": "RLP9A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IUU1-1", "protein_name": "Receptor like protein 27", "gene_name": "RLP27", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J7T6-1", "protein_name": "Receptor-like protein 39", "gene_name": "RLP39", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J8G2-1", "protein_name": "Receptor-like protein 33", "gene_name": "RLP33", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JGB6-1", "protein_name": "Receptor-like protein 46", "gene_name": "RLP46", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4KHA2-1", "protein_name": "Receptor-like protein 54", "gene_name": "RLP54", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O48763-1", "protein_name": "Putative receptor like protein 25", "gene_name": "RLP25", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O48851-1", "protein_name": "Receptor like protein 22", "gene_name": "RLP22", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49328-1", "protein_name": "Receptor like protein 26", "gene_name": "RLP26", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49329-1", "protein_name": "Receptor like protein 24", "gene_name": "RLP24", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O48849-1", "protein_name": "Receptor like protein 23", "gene_name": "RLP23", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80809-1", "protein_name": "Receptor-like protein CLAVATA2", "gene_name": "CLV2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LJS0-1", "protein_name": "Receptor-like protein 42", "gene_name": "RLP42", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q7FZR1-1", "protein_name": "Receptor-like protein 52", "gene_name": "RLP52", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C9H7-1", "protein_name": "Receptor-like protein 12", "gene_name": "RLP12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LJS2-1", "protein_name": "Receptor-like protein 41", "gene_name": "RLP41", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZUK3-1", "protein_name": "Receptor-like protein 19", "gene_name": "RLP19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9MA83-1", "protein_name": "Receptor-like protein 30", "gene_name": "RLP30", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SN38-1", "protein_name": "Receptor-like protein 51", "gene_name": "RLP51", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SSD1-1", "protein_name": "Protein TOO MANY MOUTHS", "gene_name": "TMM", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SVN2", "url": "https://www.uniprot.org/uniprotkb/Q9SVN2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.18434605", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 58 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Regulation of phosphatidylcholine biosynthesis under salt stress involves choline kinases in Arabidopsis thaliana.", "journal": "FEBS Lett.", "date": "2004", "authors": "Tasseva Guergana, Richard Luc, Zachowski Alain", "reference": { "type": "PubMed", "id": "15147879", "url": "https://pubmed.ncbi.nlm.nih.gov/15147879" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SZ92-1", "protein_name": "Probable choline kinase 3", "gene_name": "CEK3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M9H6-1", "protein_name": "Probable choline kinase 1", "gene_name": "CK1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZVI9-1", "protein_name": "Ethanolamine-phosphate cytidylyltransferase", "gene_name": "PECT1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L518-1", "protein_name": "Probable choline kinase 2", "gene_name": "F1O17.1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SZ92", "url": "https://www.uniprot.org/uniprotkb/Q9SZ92" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15147879", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arabidopsis AtGPAT1, a member of the membrane-bound glycerol-3-phosphate acyltransferase gene family, is essential for tapetum differentiation and male fertility.", "journal": "Plant Cell", "date": "2003", "authors": "Zheng Zhifu, Xia Qun, Dauk Melanie, Shen Wenyun, Selvaraj Gopalan, Zou Jitao", "reference": { "type": "PubMed", "id": "12897259", "url": "https://pubmed.ncbi.nlm.nih.gov/12897259" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SYJ2-1", "protein_name": "Probable glycerol-3-phosphate acyltransferase 3", "gene_name": "GPAT3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80437-1", "protein_name": "Glycerol-3-phosphate 2-O-acyltransferase 6", "gene_name": "GPAT6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CAY3-1", "protein_name": "Glycerol-3-phosphate acyltransferase 5", "gene_name": "GPAT5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LMM0-1", "protein_name": "Glycerol-3-phosphate 2-O-acyltransferase 4", "gene_name": "GPAT4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FZ22-1", "protein_name": "Probable glycerol-3-phosphate acyltransferase 2", "gene_name": "GPAT2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LHS7-1", "protein_name": "Glycerol-3-phosphate acyltransferase 7", "gene_name": "GPAT7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SHJ5-1", "protein_name": "Glycerol-3-phosphate acyltransferase 1", "gene_name": "GPAT1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SYJ2", "url": "https://www.uniprot.org/uniprotkb/Q9SYJ2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12897259", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 7 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Regulation of the expression of plant resistance gene SNC1 by a protein with a conserved BAT2 domain.", "journal": "Plant physiology", "date": "2010-07", "authors": "Li Yingzhong, Tessaro Mark J, Li Xin, Zhang Yuelin", "reference": { "type": "PubMed", "id": "20439546", "url": "https://pubmed.ncbi.nlm.nih.gov/20439546" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SB63-1", "protein_name": "Protein MODIFIER OF SNC1 1", "gene_name": "MOS1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23530-2", "protein_name": "Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1", "gene_name": "SNC1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SB63", "url": "https://www.uniprot.org/uniprotkb/Q9SB63" } ], "common_name": "Mouse-ear 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Mol. 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"total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Computational identification of plant microRNAs and their targets, including a stress-induced miRNA.", "journal": "Mol. Cell", "date": "2004", "authors": "Jones-Rhoades Matthew W, Bartel David P", "reference": { "type": "PubMed", "id": "15200956", "url": "https://pubmed.ncbi.nlm.nih.gov/15200956" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SU44-1", "protein_name": "Growth-regulating factor 8", "gene_name": "GRF8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S9M3-1", "protein_name": "Growth-regulating factor 9", "gene_name": "GRF9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L8A7-1", "protein_name": "Growth-regulating factor 4", "gene_name": "GRF4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L8A8-1", "protein_name": "Growth-regulating factor 2", "gene_name": "GRF2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81001-1", "protein_name": "Growth-regulating factor 1", "gene_name": "GRF1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FJB8-1", "protein_name": "Growth-regulating factor 7", "gene_name": "GRF7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJR5-1", "protein_name": "Growth-regulating factor 3", "gene_name": "GRF3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SU44", "url": "https://www.uniprot.org/uniprotkb/Q9SU44" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15200956", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 7 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Ectopic expression of miR396 suppresses GRF target gene expression and alters leaf growth in Arabidopsis.", "journal": "Physiol. Plantarum", "date": "2009", "authors": "Liu Dongmei, Song Yu, Chen Zhixiang, Yu Diqiu", "reference": { "type": "PubMed", "id": "19453503", "url": "https://pubmed.ncbi.nlm.nih.gov/19453503" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SU44-1", "protein_name": "Growth-regulating factor 8", "gene_name": "GRF8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S9M3-1", "protein_name": "Growth-regulating factor 9", "gene_name": "GRF9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L8A7-1", "protein_name": "Growth-regulating factor 4", "gene_name": "GRF4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L8A8-1", "protein_name": "Growth-regulating factor 2", "gene_name": "GRF2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81001-1", "protein_name": "Growth-regulating factor 1", "gene_name": "GRF1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FJB8-1", "protein_name": "Growth-regulating factor 7", "gene_name": "GRF7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJR5-1", "protein_name": "Growth-regulating factor 3", "gene_name": "GRF3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SU44", "url": "https://www.uniprot.org/uniprotkb/Q9SU44" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.19453503", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 7 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Kinesins in the Arabidopsis genome: a comparative analysis among eukaryotes.", "journal": "BMC Genomics", "date": "2001", "authors": "Reddy A S, Day I S", "reference": { "type": "PubMed", "id": "11472632", "url": "https://pubmed.ncbi.nlm.nih.gov/11472632" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LZU5-1", "protein_name": "Kinesin-like protein KIN-5D", "gene_name": "KIN5D", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S7P3-1", "protein_name": "Kinesin-like protein KIN-7N", "gene_name": "KIN7N; ZCF125", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCJ4-1", "protein_name": "Kinesin-like protein KIN-8B", "gene_name": "KIN8B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJU0-1", "protein_name": "Kinesin-like protein KIN-7M, chloroplastic", "gene_name": "KIN7M", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P46875-1", "protein_name": "Kinesin-like protein KIN-14N", "gene_name": "ATK3; KIN14N", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P82266-1", "protein_name": "Kinesin-like protein KIN-5C", "gene_name": "KIN5C", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P46864-1", "protein_name": "Kinesin-like protein KIN-14M", "gene_name": "KIN14M", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IBQ9-1", "protein_name": "Kinesin-like protein KIN-14Q", "gene_name": "KIN14Q; MDKIN1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "B3H6Z8-1", "protein_name": "Kinesin-like protein KIN-14J", "gene_name": "KIN14J", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4HZF0-1", "protein_name": "Kinesin-like protein KIN-14H", "gene_name": "KIN14H", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4HR11-1", "protein_name": "Kinesin-like protein KIN-6", "gene_name": "KIN6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IAR2-1", "protein_name": "Kinesin-like protein KIN-14O", "gene_name": "KIN14O", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IJK6-1", "protein_name": "Kinesin-like protein KIN-14R", "gene_name": "KIN14R; MDKIN2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IL57-1", "protein_name": "Kinesin-like protein KIN-14I", "gene_name": "KIN14I", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JQ51-1", "protein_name": "Kinesin-like protein KIN-7I", "gene_name": "KIN7I", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4I1T9-1", "protein_name": "Kinesin-like protein KIN-14T", "gene_name": "KIN14T", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4ICA0-1", "protein_name": "Kinesin-like protein KIN-8A", "gene_name": "KIN8A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IGL2-1", "protein_name": "Kinesin-like protein KIN-7E", "gene_name": "KIN7E", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FHN8-1", "protein_name": "Kinesin-like protein KIN-14E", "gene_name": "KIN14E; ZWI", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K0J3-1", "protein_name": "Kinesin-like protein KIN-4C", "gene_name": "KIN4C; MSL3.50", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J1U4-1", "protein_name": "Kinesin-like protein KIN-12E", "gene_name": "KIN12E", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81635-1", "protein_name": "Kinesin-like protein KIN-14G", "gene_name": "KIN14G", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FKP4-1", "protein_name": "Kinesin-like protein KIN-14B", "gene_name": "KAC2; KIN14B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94LW7-1", "protein_name": "Kinesin-like protein KIN-4B", "gene_name": "KICP-02; KIN4B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q940Y8-1", "protein_name": "Kinesin-like protein KIN-13B", "gene_name": "KIN13B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W0Y9-1", "protein_name": "Kinesin-like protein KIN-14U", "gene_name": "KIN14U", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W5R5-1", "protein_name": "Kinesin-like protein KIN-7D, mitochondrial", "gene_name": "KIN7D", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W5R6-1", "protein_name": "Kinesin-like protein KIN-7C, mitochondrial", "gene_name": "KIN7C", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J2M6-1", "protein_name": "Kinesin-like protein KIN-14L", "gene_name": "KIN14L", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J394-1", "protein_name": "Kinesin-like protein KIN-7G", "gene_name": "KIN7G", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JDI6-1", "protein_name": "Kinesin-like protein KIN-12F", "gene_name": "KIN12F", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K3X8-1", "protein_name": "Kinesin-like protein KIN-7L, chloroplastic", "gene_name": "KIN75; KIN7L", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J8L3-1", "protein_name": "Kinesin-like protein KIN-7K, chloroplastic", "gene_name": "KIN73; KIN7K", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JUI9-1", "protein_name": "Kinesin-like protein KIN-7F", "gene_name": "KIN7F", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JX00-1", "protein_name": "Kinesin-like protein KIN-14K", "gene_name": "KIN14K", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JZ68-1", "protein_name": "Kinesin-like protein KIN-7H", "gene_name": "KIN7H", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WN69-1", "protein_name": "Kinesin-like protein KIN-14P", "gene_name": "KIN14P", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q5E913-1", "protein_name": "Kinesin-like protein KIN-10B", "gene_name": "KIN10B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WQJ7-1", "protein_name": "Kinesin-like protein KIN-5B", "gene_name": "KIN5B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4KEC6-1", "protein_name": "Kinesin-like protein KIN-10C", "gene_name": "KIN10C; MRO11.5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J2K4-1", "protein_name": "Kinesin-like protein KIN-7O", "gene_name": "KIN7O", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K4C5-1", "protein_name": "Kinesin-like protein KIN-14S", "gene_name": "KIN14S", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L7Y8-1", "protein_name": "Kinesin-like protein KIN-12B", "gene_name": "KIN12B; KINESIN-12B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GS71-1", "protein_name": "Kinesin-like protein KIN-4A", "gene_name": "KIN4A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GW44-1", "protein_name": "Kinesin-like protein KIN-1", "gene_name": "KIN1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LNZ2-1", "protein_name": "Kinesin-like protein KIN-7B", "gene_name": "KIN7B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S905-1", "protein_name": "Kinesin-like protein KIN-7A", "gene_name": "KIN7A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VWI7-1", "protein_name": "Kinesin-like protein KIN-10A", "gene_name": "KIN10A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W1Y3-1", "protein_name": "Kinesin-like protein KIN-14F", "gene_name": "KIN14F; KP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q940B8-1", "protein_name": "Kinesin-like protein KIN-13A", "gene_name": "KIN13A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LPC6-1", "protein_name": "Kinesin-like protein KIN-UB", "gene_name": "ARK2; KINUB", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FZ06-1", "protein_name": "Kinesin-like protein KIN-UA", "gene_name": "ARK3; KINUA", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LX99-1", "protein_name": "Kinesin-like protein KIN-14A", "gene_name": "KIN14A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FIG8-1", "protein_name": "Kinesin-like protein KIN-7J", "gene_name": "KIN7J; MDH9.19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q27IK7-1", "protein_name": "Kinesin-like protein KIN-12C", "gene_name": "KIN12C; POK1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q07970-1", "protein_name": "Kinesin-like protein KIN-14C", "gene_name": "KIN14C", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q27IK6-1", "protein_name": "Kinesin-like protein KIN-12D", "gene_name": "KIN12D", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LDN0-1", "protein_name": "Kinesin-like protein KIN-12A", "gene_name": "KIN12A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IIS5-1", "protein_name": "Kinesin-like protein KIN-5A", "gene_name": "KIN5A; RSW7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JGP4-1", "protein_name": "Kinesin-like protein KIN-14D", "gene_name": "ATK5; KIN14D", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SV36-1", "protein_name": "Kinesin-like protein KIN-UC", "gene_name": "KINUC; MRH2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LZU5", "url": "https://www.uniprot.org/uniprotkb/Q9LZU5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11472632", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 61 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Comprehensive comparative analysis of kinesins in photosynthetic eukaryotes.", "journal": "BMC Genomics", "date": "2006", "authors": "Richardson Dale N, Simmons Mark P, Reddy Anireddy S N", "reference": { "type": "PubMed", "id": "16448571", "url": "https://pubmed.ncbi.nlm.nih.gov/16448571" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LZU5-1", "protein_name": "Kinesin-like protein KIN-5D", "gene_name": "KIN5D", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S7P3-1", "protein_name": "Kinesin-like protein KIN-7N", "gene_name": "KIN7N; ZCF125", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCJ4-1", "protein_name": "Kinesin-like protein KIN-8B", "gene_name": "KIN8B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJU0-1", "protein_name": "Kinesin-like protein KIN-7M, chloroplastic", "gene_name": "KIN7M", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P46875-1", "protein_name": "Kinesin-like protein KIN-14N", "gene_name": "ATK3; KIN14N", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P82266-1", "protein_name": "Kinesin-like protein KIN-5C", "gene_name": "KIN5C", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P46864-1", "protein_name": "Kinesin-like protein KIN-14M", "gene_name": "KIN14M", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IBQ9-1", "protein_name": "Kinesin-like protein KIN-14Q", "gene_name": "KIN14Q; MDKIN1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "B3H6Z8-1", "protein_name": "Kinesin-like protein KIN-14J", "gene_name": "KIN14J", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4HZF0-1", "protein_name": "Kinesin-like protein KIN-14H", "gene_name": "KIN14H", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4HR11-1", "protein_name": "Kinesin-like protein KIN-6", "gene_name": "KIN6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IAR2-1", "protein_name": "Kinesin-like protein KIN-14O", "gene_name": "KIN14O", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IJK6-1", "protein_name": "Kinesin-like protein KIN-14R", "gene_name": "KIN14R; MDKIN2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IL57-1", "protein_name": "Kinesin-like protein KIN-14I", "gene_name": "KIN14I", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JQ51-1", "protein_name": "Kinesin-like protein KIN-7I", "gene_name": "KIN7I", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4I1T9-1", "protein_name": "Kinesin-like protein KIN-14T", "gene_name": "KIN14T", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4ICA0-1", "protein_name": "Kinesin-like protein KIN-8A", "gene_name": "KIN8A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IGL2-1", "protein_name": "Kinesin-like protein KIN-7E", "gene_name": "KIN7E", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FHN8-1", "protein_name": "Kinesin-like protein KIN-14E", "gene_name": "KIN14E; ZWI", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K0J3-1", "protein_name": "Kinesin-like protein KIN-4C", "gene_name": "KIN4C; MSL3.50", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J1U4-1", "protein_name": "Kinesin-like protein KIN-12E", "gene_name": "KIN12E", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81635-1", "protein_name": "Kinesin-like protein KIN-14G", "gene_name": "KIN14G", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FKP4-1", "protein_name": "Kinesin-like protein KIN-14B", "gene_name": "KAC2; KIN14B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94LW7-1", "protein_name": "Kinesin-like protein KIN-4B", "gene_name": "KICP-02; KIN4B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q940Y8-1", "protein_name": "Kinesin-like protein KIN-13B", "gene_name": "KIN13B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W0Y9-1", "protein_name": "Kinesin-like protein KIN-14U", "gene_name": "KIN14U", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W5R5-1", "protein_name": "Kinesin-like protein KIN-7D, mitochondrial", "gene_name": "KIN7D", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W5R6-1", "protein_name": "Kinesin-like protein KIN-7C, mitochondrial", "gene_name": "KIN7C", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J2M6-1", "protein_name": "Kinesin-like protein KIN-14L", "gene_name": "KIN14L", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J394-1", "protein_name": "Kinesin-like protein KIN-7G", "gene_name": "KIN7G", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JDI6-1", "protein_name": "Kinesin-like protein KIN-12F", "gene_name": "KIN12F", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K3X8-1", "protein_name": "Kinesin-like protein KIN-7L, chloroplastic", "gene_name": "KIN75; KIN7L", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J8L3-1", "protein_name": "Kinesin-like protein KIN-7K, chloroplastic", "gene_name": "KIN73; KIN7K", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JUI9-1", "protein_name": "Kinesin-like protein KIN-7F", "gene_name": "KIN7F", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JX00-1", "protein_name": "Kinesin-like protein KIN-14K", "gene_name": "KIN14K", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JZ68-1", "protein_name": "Kinesin-like protein KIN-7H", "gene_name": "KIN7H", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WN69-1", "protein_name": "Kinesin-like protein KIN-14P", "gene_name": "KIN14P", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q5E913-1", "protein_name": "Kinesin-like protein KIN-10B", "gene_name": "KIN10B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WQJ7-1", "protein_name": "Kinesin-like protein KIN-5B", "gene_name": "KIN5B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4KEC6-1", "protein_name": "Kinesin-like protein KIN-10C", "gene_name": "KIN10C; MRO11.5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J2K4-1", "protein_name": "Kinesin-like protein KIN-7O", "gene_name": "KIN7O", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K4C5-1", "protein_name": "Kinesin-like protein KIN-14S", "gene_name": "KIN14S", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L7Y8-1", "protein_name": "Kinesin-like protein KIN-12B", "gene_name": "KIN12B; KINESIN-12B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GS71-1", "protein_name": "Kinesin-like protein KIN-4A", "gene_name": "KIN4A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GW44-1", "protein_name": "Kinesin-like protein KIN-1", "gene_name": "KIN1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LNZ2-1", "protein_name": "Kinesin-like protein KIN-7B", "gene_name": "KIN7B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S905-1", "protein_name": "Kinesin-like protein KIN-7A", "gene_name": "KIN7A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VWI7-1", "protein_name": "Kinesin-like protein KIN-10A", "gene_name": "KIN10A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W1Y3-1", "protein_name": "Kinesin-like protein KIN-14F", "gene_name": "KIN14F; KP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q940B8-1", "protein_name": "Kinesin-like protein KIN-13A", "gene_name": "KIN13A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LPC6-1", "protein_name": "Kinesin-like protein KIN-UB", "gene_name": "ARK2; KINUB", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FZ06-1", "protein_name": "Kinesin-like protein KIN-UA", "gene_name": "ARK3; KINUA", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LX99-1", "protein_name": "Kinesin-like protein KIN-14A", "gene_name": "KIN14A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FIG8-1", "protein_name": "Kinesin-like protein KIN-7J", "gene_name": "KIN7J; MDH9.19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q27IK7-1", "protein_name": "Kinesin-like protein KIN-12C", "gene_name": "KIN12C; POK1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q07970-1", "protein_name": "Kinesin-like protein KIN-14C", "gene_name": "KIN14C", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q27IK6-1", "protein_name": "Kinesin-like protein KIN-12D", "gene_name": "KIN12D", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LDN0-1", "protein_name": "Kinesin-like protein KIN-12A", "gene_name": "KIN12A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IIS5-1", "protein_name": "Kinesin-like protein KIN-5A", "gene_name": "KIN5A; RSW7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JGP4-1", "protein_name": "Kinesin-like protein KIN-14D", "gene_name": "ATK5; KIN14D", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SV36-1", "protein_name": "Kinesin-like protein KIN-UC", "gene_name": "KINUC; MRH2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LZU5", "url": "https://www.uniprot.org/uniprotkb/Q9LZU5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16448571", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 61 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Mitosis-specific kinesins in Arabidopsis.", "journal": "Trends Plant Sci.", "date": "2006", "authors": "Vanstraelen Marleen, Inz\u00e9 Dirk, Geelen Danny", "reference": { "type": "PubMed", "id": "16530461", "url": "https://pubmed.ncbi.nlm.nih.gov/16530461" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LZU5-1", "protein_name": "Kinesin-like protein KIN-5D", "gene_name": "KIN5D", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P82266-1", "protein_name": "Kinesin-like protein KIN-5C", "gene_name": "KIN5C", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WQJ7-1", "protein_name": "Kinesin-like protein KIN-5B", "gene_name": "KIN5B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q27IK7-1", "protein_name": "Kinesin-like protein KIN-12C", "gene_name": "KIN12C; POK1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q27IK6-1", "protein_name": "Kinesin-like protein KIN-12D", "gene_name": "KIN12D", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IIS5-1", "protein_name": "Kinesin-like protein KIN-5A", "gene_name": "KIN5A; RSW7", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LZU5", "url": "https://www.uniprot.org/uniprotkb/Q9LZU5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16530461", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Functions of the Arabidopsis kinesin superfamily of microtubule-based motor proteins.", "journal": "Protoplasma", "date": "2012", "authors": "Zhu Chuanmei, Dixit Ram", "reference": { "type": "PubMed", "id": "22038119", "url": "https://pubmed.ncbi.nlm.nih.gov/22038119" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LZU5-1", "protein_name": "Kinesin-like protein KIN-5D", "gene_name": "KIN5D", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S7P3-1", "protein_name": "Kinesin-like protein KIN-7N", "gene_name": "KIN7N; ZCF125", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCJ4-1", "protein_name": "Kinesin-like protein KIN-8B", "gene_name": "KIN8B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJU0-1", "protein_name": "Kinesin-like protein KIN-7M, chloroplastic", "gene_name": "KIN7M", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P46875-1", "protein_name": "Kinesin-like protein KIN-14N", "gene_name": "ATK3; KIN14N", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P82266-1", "protein_name": "Kinesin-like protein KIN-5C", "gene_name": "KIN5C", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P46864-1", "protein_name": "Kinesin-like protein KIN-14M", "gene_name": "KIN14M", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IBQ9-1", "protein_name": "Kinesin-like protein KIN-14Q", "gene_name": "KIN14Q; MDKIN1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "B3H6Z8-1", "protein_name": "Kinesin-like protein KIN-14J", "gene_name": "KIN14J", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4HZF0-1", "protein_name": "Kinesin-like protein KIN-14H", "gene_name": "KIN14H", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4HR11-1", "protein_name": "Kinesin-like protein KIN-6", "gene_name": "KIN6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IAR2-1", "protein_name": "Kinesin-like protein KIN-14O", "gene_name": "KIN14O", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IJK6-1", "protein_name": "Kinesin-like protein KIN-14R", "gene_name": "KIN14R; MDKIN2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IL57-1", "protein_name": "Kinesin-like protein KIN-14I", "gene_name": "KIN14I", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JQ51-1", "protein_name": "Kinesin-like protein KIN-7I", "gene_name": "KIN7I", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4I1T9-1", "protein_name": "Kinesin-like protein KIN-14T", "gene_name": "KIN14T", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4ICA0-1", "protein_name": "Kinesin-like protein KIN-8A", "gene_name": "KIN8A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IGL2-1", "protein_name": "Kinesin-like protein KIN-7E", "gene_name": "KIN7E", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FHN8-1", "protein_name": "Kinesin-like protein KIN-14E", "gene_name": "KIN14E; ZWI", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K0J3-1", "protein_name": "Kinesin-like protein KIN-4C", "gene_name": "KIN4C; MSL3.50", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J1U4-1", "protein_name": "Kinesin-like protein KIN-12E", "gene_name": "KIN12E", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81635-1", "protein_name": "Kinesin-like protein KIN-14G", "gene_name": "KIN14G", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FKP4-1", "protein_name": "Kinesin-like protein KIN-14B", "gene_name": "KAC2; KIN14B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94LW7-1", "protein_name": "Kinesin-like protein KIN-4B", "gene_name": "KICP-02; KIN4B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q940Y8-1", "protein_name": "Kinesin-like protein KIN-13B", "gene_name": "KIN13B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W0Y9-1", "protein_name": "Kinesin-like protein KIN-14U", "gene_name": "KIN14U", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W5R5-1", "protein_name": "Kinesin-like protein KIN-7D, mitochondrial", "gene_name": "KIN7D", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W5R6-1", "protein_name": "Kinesin-like protein KIN-7C, mitochondrial", "gene_name": "KIN7C", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J2M6-1", "protein_name": "Kinesin-like protein KIN-14L", "gene_name": "KIN14L", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J394-1", "protein_name": "Kinesin-like protein KIN-7G", "gene_name": "KIN7G", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JDI6-1", "protein_name": "Kinesin-like protein KIN-12F", "gene_name": "KIN12F", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K3X8-1", "protein_name": "Kinesin-like protein KIN-7L, chloroplastic", "gene_name": "KIN75; KIN7L", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J8L3-1", "protein_name": "Kinesin-like protein KIN-7K, chloroplastic", "gene_name": "KIN73; KIN7K", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JUI9-1", "protein_name": "Kinesin-like protein KIN-7F", "gene_name": "KIN7F", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JX00-1", "protein_name": "Kinesin-like protein KIN-14K", "gene_name": "KIN14K", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JZ68-1", "protein_name": "Kinesin-like protein KIN-7H", "gene_name": "KIN7H", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WN69-1", "protein_name": "Kinesin-like protein KIN-14P", "gene_name": "KIN14P", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q5E913-1", "protein_name": "Kinesin-like protein KIN-10B", "gene_name": "KIN10B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WQJ7-1", "protein_name": "Kinesin-like protein KIN-5B", "gene_name": "KIN5B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4KEC6-1", "protein_name": "Kinesin-like protein KIN-10C", "gene_name": "KIN10C; MRO11.5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J2K4-1", "protein_name": "Kinesin-like protein KIN-7O", "gene_name": "KIN7O", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K4C5-1", "protein_name": "Kinesin-like protein KIN-14S", "gene_name": "KIN14S", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L7Y8-1", "protein_name": "Kinesin-like protein KIN-12B", "gene_name": "KIN12B; KINESIN-12B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GS71-1", "protein_name": "Kinesin-like protein KIN-4A", "gene_name": "KIN4A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GW44-1", "protein_name": "Kinesin-like protein KIN-1", "gene_name": "KIN1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LNZ2-1", "protein_name": "Kinesin-like protein KIN-7B", "gene_name": "KIN7B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S905-1", "protein_name": "Kinesin-like protein KIN-7A", "gene_name": "KIN7A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VWI7-1", "protein_name": "Kinesin-like protein KIN-10A", "gene_name": "KIN10A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W1Y3-1", "protein_name": "Kinesin-like protein KIN-14F", "gene_name": "KIN14F; KP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q940B8-1", "protein_name": "Kinesin-like protein KIN-13A", "gene_name": "KIN13A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LPC6-1", "protein_name": "Kinesin-like protein KIN-UB", "gene_name": "ARK2; KINUB", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FZ06-1", "protein_name": "Kinesin-like protein KIN-UA", "gene_name": "ARK3; KINUA", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LX99-1", "protein_name": "Kinesin-like protein KIN-14A", "gene_name": "KIN14A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FIG8-1", "protein_name": "Kinesin-like protein KIN-7J", "gene_name": "KIN7J; MDH9.19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q27IK7-1", "protein_name": "Kinesin-like protein KIN-12C", "gene_name": "KIN12C; POK1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q07970-1", "protein_name": "Kinesin-like protein KIN-14C", "gene_name": "KIN14C", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q27IK6-1", "protein_name": "Kinesin-like protein KIN-12D", "gene_name": "KIN12D", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LDN0-1", "protein_name": "Kinesin-like protein KIN-12A", "gene_name": "KIN12A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IIS5-1", "protein_name": "Kinesin-like protein KIN-5A", "gene_name": "KIN5A; RSW7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JGP4-1", "protein_name": "Kinesin-like protein KIN-14D", "gene_name": "ATK5; KIN14D", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SV36-1", "protein_name": "Kinesin-like protein KIN-UC", "gene_name": "KINUC; MRH2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LZU5", "url": "https://www.uniprot.org/uniprotkb/Q9LZU5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.22038119", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 61 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Interactions of an Arabidopsis RanBPM homologue with LisH-CTLH domain proteins revealed high conservation of CTLH complexes in eukaryotes.", "journal": "BMC Plant Biol.", "date": "2012", "authors": "Toma\u0161t\u00edkov\u00e1 Eva, Cenklov\u00e1 V\u011bra, Kohoutov\u00e1 Lucie, Petrovsk\u00e1 Be\u00e1ta, V\u00e1chov\u00e1 Lenka, Halada Petr, Ko\u010d\u00e1rov\u00e1 Gabriela, Binarov\u00e1 Pavla", "reference": { "type": "PubMed", "id": "22676313", "url": "https://pubmed.ncbi.nlm.nih.gov/22676313" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M2V9-1", "protein_name": "Protein MAEA homolog", "gene_name": "MAEA", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4HYD7-1", "protein_name": "Ran-binding protein M homolog", "gene_name": "RANBPM", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FND4-1", "protein_name": "WD repeat-containing protein WDS homolog", "gene_name": "WDS", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T075-1", "protein_name": "Protein RMD5 homolog", "gene_name": "RMD5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FNN2-1", "protein_name": "WD repeat-containing protein 26 homolog", "gene_name": "WDR26", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84WK5-1", "protein_name": "Protein GID8 homolog", "gene_name": "GID8", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M2V9", "url": "https://www.uniprot.org/uniprotkb/Q9M2V9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.22676313", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The response regulator 2 mediates ethylene signalling and hormone signal integration in Arabidopsis.", "journal": "EMBO J.", "date": "2004", "authors": "Hass Claudia, Lohrmann Jens, Albrecht Ver\u00f3nica, Sweere Uta, Hummel Florian, Yoo Sang Dong, Hwang Ildoo, Zhu Tong, Sch\u00e4fer Eberhard, Kudla J\u00f6rg, Harter Klaus", "reference": { "type": "PubMed", "id": "15282545", "url": "https://pubmed.ncbi.nlm.nih.gov/15282545" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M2T2-1", "protein_name": "16 kDa phloem protein 1", "gene_name": "PP16-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZWJ9-1", "protein_name": "Two-component response regulator ARR2", "gene_name": "ARR2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M2T2", "url": "https://www.uniprot.org/uniprotkb/Q9M2T2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "mutagenesis": [ { "start_pos": 80, "end_pos": 80, "sequence_org": "D", "sequence_mut": "N", "comment": "Impaired cytokinin-mediated and ethylene-mediated phosphorylation, severe pleiotropic aberrations in growth and development.", "evidence": [ { "database": "UniProtKB", "id": "Q9ZWJ9", "url": "https://www.uniprot.org/uniprotkb/Q9ZWJ9" }, { "database": "PubMed", "id": "16407152", "url": "https://pubmed.ncbi.nlm.nih.gov/16407152" }, { "database": "PubMed", "id": "15282545", "url": "https://pubmed.ncbi.nlm.nih.gov/15282545" } ], "uniprot_canonical_ac": "Q9ZWJ9-1" } ], "record_id": "pubmed.15282545", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], 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"sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Solution NMR Structure and Backbone Dynamics of Partially Disordered Arabidopsis thaliana Phloem Protein 16-1, a Putative mRNA Transporter.", "journal": "Biochemistry", "date": "2018-02-13", "authors": "Sashi Pulikallu, Singarapu Kiran K, Bhuyan Abani K", "reference": { "type": "PubMed", "id": "29320165", "url": "https://pubmed.ncbi.nlm.nih.gov/29320165" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M2T2-1", "protein_name": "16 kDa phloem protein 1", "gene_name": "PP16-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C8S6-1", "protein_name": "16 kDa phloem protein 2", "gene_name": 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"o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "CYSTM, a Novel Non-Secreted Cysteine-Rich Peptide Family, Involved in Environmental Stresses in Arabidopsis thaliana.", "journal": "Plant & cell physiology", "date": "2018-02-01", "authors": "Xu Yang, Yu Zipeng, Zhang Di, Huang Jinguang, Wu Changai, Yang Guodong, Yan Kang, Zhang Shizhong, Zheng Chengchao", "reference": { "type": "PubMed", "id": "29272523", "url": "https://pubmed.ncbi.nlm.nih.gov/29272523" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SKY1-1", "protein_name": "Protein CYSTEINE-RICH TRANSMEMBRANE MODULE 4", "gene_name": "ATHCYSTM4; CYSTM4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q1PEX8-1", "protein_name": "Protein CYSTEINE-RICH TRANSMEMBRANE MODULE 5", "gene_name": "ATHCYSTM5; CYSTM5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6NN03-1", "protein_name": "Protein CYSTEINE-RICH TRANSMEMBRANE MODULE 12", "gene_name": "ATHCYSTM12; CYSTM12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SKX9-1", "protein_name": "Protein CYSTEINE-RICH TRANSMEMBRANE MODULE 6", "gene_name": "ATHCYSTM6; CYSTM6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IZ80-1", "protein_name": "Protein CYSTEINE-RICH TRANSMEMBRANE MODULE 10", "gene_name": "CYSTM10; WIH3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23035-1", "protein_name": "Protein CYSTEINE-RICH TRANSMEMBRANE MODULE 1", "gene_name": "CYSTM1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LHJ3-1", "protein_name": "Protein CYSTEINE-RICH TRANSMEMBRANE MODULE 9", "gene_name": "CYSTM9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LG30-1", "protein_name": "Protein CYSTEINE-RICH TRANSMEMBRANE MODULE 11", "gene_name": "CYSTM11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W472-1", "protein_name": "Protein CYSTEINE-RICH TRANSMEMBRANE MODULE 8", "gene_name": "CYSTM8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22802-1", "protein_name": "Protein CYSTEINE-RICH TRANSMEMBRANE MODULE 7", "gene_name": "CYSTM7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FJW3-1", "protein_name": "Protein CYSTEINE-RICH TRANSMEMBRANE MODULE 13", "gene_name": "WIH1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3ECR7-1", "protein_name": "Protein CYSTEINE-RICH TRANSMEMBRANE MODULE 2", "gene_name": "CYSTM2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A0A178WF56-1", "protein_name": "Protein CYSTEINE-RICH TRANSMEMBRANE MODULE 3", "gene_name": "ATHCYSTM3; CYSTM3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SKY1", "url": "https://www.uniprot.org/uniprotkb/Q9SKY1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.29272523", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 13 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Interactions of Arabidopsis RS domain containing cyclophilins with SR proteins and U1 and U11 small nuclear ribonucleoprotein-specific proteins suggest their involvement in pre-mRNA Splicing.", "journal": "J. Biol. Chem.", "date": "2004", "authors": "Lorkovic Zdravko J, Lopato Sergiy, Pexa Monika, Lehner Reinhard, Barta Andrea", "reference": { "type": "PubMed", "id": "15166240", "url": "https://pubmed.ncbi.nlm.nih.gov/15166240" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SNB8-1", "protein_name": "Scarecrow-like protein 30", "gene_name": "SCL30", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22315-1", "protein_name": "Serine/arginine-rich-splicing factor SR34", "gene_name": "SR34", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LY75-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase CYP63", "gene_name": "CYP63", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RWY7-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase CYP95", "gene_name": "CYP95", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CAN3-1", "protein_name": "Scarecrow-like protein 28", "gene_name": "SCL28", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q1PDV2-1", "protein_name": "Serine/arginine-rich SC35-like splicing factor SCL28", "gene_name": "SCL28", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L3X8-1", "protein_name": "Serine/arginine-rich SC35-like splicing factor SCL30", "gene_name": "SCL30", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VY74-1", "protein_name": "U11/U12 small nuclear ribonucleoprotein 35 kDa protein", "gene_name": "SNRNP35", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q42404-1", "protein_name": "U1 small nuclear ribonucleoprotein 70 kDa", "gene_name": "RNU1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XFR5-1", "protein_name": "Serine/arginine-rich splicing factor SR30", "gene_name": "SR30", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SNB8", "url": "https://www.uniprot.org/uniprotkb/Q9SNB8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15166240", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 10 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Evolutionary conservation of minor U12-type spliceosome between plants and humans.", "journal": "RNA", "date": "2005", "authors": "Lorkovic Zdravko J, Lehner Reinhard, Forstner Christina, Barta Andrea", "reference": { "type": "PubMed", "id": "15987817", "url": "https://pubmed.ncbi.nlm.nih.gov/15987817" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SNB8-1", "protein_name": "Scarecrow-like protein 30", "gene_name": "SCL30", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M8X2-1", "protein_name": "U11/U12 small nuclear ribonucleoprotein 48 kDa protein", "gene_name": "SNRNP48", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0DKL4-1", "protein_name": "Spliceosome-associated protein 130 A", "gene_name": "SAP130A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0DKL6-1", "protein_name": "Spliceosome-associated protein 130 B", "gene_name": "SAP130B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22315-1", "protein_name": "Serine/arginine-rich-splicing factor SR34", "gene_name": "SR34", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LY75-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase CYP63", "gene_name": "CYP63", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22922-1", "protein_name": "U2 small nuclear ribonucleoprotein B''", "gene_name": "U2B''", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84WS8-1", "protein_name": "U11/U12 small nuclear ribonucleoprotein 25 kDa protein", "gene_name": "SNRNP25", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VYD3-1", "protein_name": "U11/U12 small nuclear ribonucleoprotein 59 kDa protein", "gene_name": "SNRNP59", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SIP7-1", "protein_name": "Small ribosomal subunit protein uS3z", "gene_name": "RPS3A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CAN3-1", "protein_name": "Scarecrow-like protein 28", "gene_name": "SCL28", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0C883-1", "protein_name": "Scarecrow-like protein 33", "gene_name": "SCL33", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39244-1", "protein_name": "U1 small nuclear ribonucleoprotein A", "gene_name": "U1A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8H1S6-1", "protein_name": "U2 small nuclear ribonucleoprotein B'' 2", "gene_name": "U2BL", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RWV8-1", "protein_name": "U11/U12 small nuclear ribonucleoprotein 65 kDa protein", "gene_name": "SNRNP65; U12-65K", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FMG4-1", "protein_name": "Serine/arginine-rich splicing factor SC35", "gene_name": "SC35", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LHP2-1", "protein_name": "Serine/arginine-rich SC35-like splicing factor SCL30A", "gene_name": "SCL30A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81127-1", "protein_name": "Serine/arginine-rich splicing factor RSZ21", "gene_name": "RSZ21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VY74-1", "protein_name": "U11/U12 small nuclear ribonucleoprotein 35 kDa protein", "gene_name": "SNRNP35", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VYA5-1", "protein_name": "Serine/arginine-rich splicing factor RS2Z33", "gene_name": "RS2Z33", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CAE4-1", "protein_name": "U11/U12 small nuclear ribonucleoprotein 31 kDa protein", "gene_name": "SNRNP31", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P92965-1", "protein_name": "Serine/arginine-rich splicing factor RS40", "gene_name": "RS40", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XFR5-1", "protein_name": "Serine/arginine-rich splicing factor SR30", "gene_name": "SR30", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SNB8", "url": "https://www.uniprot.org/uniprotkb/Q9SNB8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15987817", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 23 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "AtHVA22 gene family in Arabidopsis: phylogenetic relationship, ABA and stress regulation, and tissue-specific expression.", "journal": "Plant Mol. Biol.", "date": "2002", "authors": "Chen Ching-Nen, Chu Chiung-Chih, Zentella Rodolfo, Pan Shu-Mei, Ho Tuan-Hua David", "reference": { "type": "PubMed", "id": "12081371", "url": "https://pubmed.ncbi.nlm.nih.gov/12081371" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9S760-1", "protein_name": "HVA22-like protein d", "gene_name": "HVA22D", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S784-1", "protein_name": "HVA22-like protein c", "gene_name": "HVA22C", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S7V4-1", "protein_name": "HVA22-like protein a", "gene_name": "HVA22A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SYX7-1", "protein_name": "HVA22-like protein b", "gene_name": "HVA22B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FED2-1", "protein_name": "HVA22-like protein e", "gene_name": "HVA22E", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9S760", "url": "https://www.uniprot.org/uniprotkb/Q9S760" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12081371", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Isolation and analysis of cDNA within a 300 kb Arabidopsis thaliana genomic region located around the 100 map unit of chromosome 1.", "journal": "Gene", "date": "1999", "authors": "Kato A, Suzuki M, Kuwahara A, Ooe H, Higano-Inaba K, Komeda Y", "reference": { "type": "PubMed", "id": "10548732", "url": "https://pubmed.ncbi.nlm.nih.gov/10548732" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9S7P3-1", "protein_name": "Kinesin-like protein KIN-7N", "gene_name": "KIN7N; ZCF125", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0JXE7-1", "protein_name": "Transcription factor BPE", "gene_name": "BPE", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IBB2-1", "protein_name": "Phosphoglycerate mutase-like protein 2", "gene_name": "F19C14.10; F19C14_10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IBE4-1", "protein_name": "Probable disease resistance protein RF45", "gene_name": "RF45", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A0A1P8AWH8-1", "protein_name": "Endo-1,4-beta-xylanase 1", "gene_name": "XYN1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SLV1-1", "protein_name": "Protein ZW2", "gene_name": "ZW2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94HV7-1", "protein_name": "E3 ubiquitin-protein ligase SPL1", "gene_name": "SPL1; ZCF61", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C646-1", "protein_name": "Probable disease resistance protein RXW24L", "gene_name": "RXW24L", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94HW2-1", "protein_name": "Retrovirus-related Pol polyprotein from transposon RE1", "gene_name": "RE1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SZT9-1", "protein_name": "Indole-3-acetic acid-amido synthetase GH3.2", "gene_name": "GH3.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L8Y0-1", "protein_name": "Small ribosomal subunit protein uS5z", "gene_name": "RPS2A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W474-1", "protein_name": "Probable disease resistance protein At1g58390", "gene_name": "F9K23.8; X7J.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93VB8-1", "protein_name": "Small ribosomal subunit protein uS5y/uS5u/uS5v", "gene_name": "RPS2B; US5U; US5V", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0DI16-1", "protein_name": "Probable disease resistance protein RDL5", "gene_name": "RDL5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0DI17-1", "protein_name": "Probable disease resistance protein RF9", "gene_name": "RF9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C648-1", "protein_name": "GDSL esterase/lipase At1g58430", "gene_name": "F9K23.4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IBD7-1", "protein_name": "Hyperosmolality-gated Ca2+ permeable channel 2.1", "gene_name": "OSCA2.1; RXW8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LQ55-1", "protein_name": "Dynamin-2B", "gene_name": "DRP2B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C652-1", "protein_name": "RNA-binding protein 1", "gene_name": "RBP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LQ54-1", "protein_name": "Probable disease resistance protein At1g59620", "gene_name": "CW9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q42400-1", "protein_name": "Amino acid permease 1", "gene_name": "AAP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SLV0-1", "protein_name": "Protein DETOXIFICATION 48", "gene_name": "DTX48", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SM02-1", "protein_name": "Squalene epoxidase 1", "gene_name": "SQE1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9S7P3", "url": "https://www.uniprot.org/uniprotkb/Q9S7P3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.10548732", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 23 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Diverse transcriptional programs associated with environmental stress and hormones in the Arabidopsis receptor-like kinase gene family.", "journal": "Mol. Plant", "date": "2009", "authors": "Chae Lee, Sudat Sylvia, Dudoit Sandrine, Zhu Tong, Luan Sheng", "reference": { "type": "PubMed", "id": "19529822", "url": "https://pubmed.ncbi.nlm.nih.gov/19529822" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SGN7-1", "protein_name": "Serine/threonine-protein kinase-like protein At1g28390", "gene_name": "F3M18.17; F3M18_17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SA72-1", "protein_name": "Probable receptor-like protein kinase At1g30570", "gene_name": "T5I8.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FN92-1", "protein_name": "Probable receptor-like protein kinase At5g59700", "gene_name": "T5I8.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LX66-1", "protein_name": "Receptor-like protein kinase HERK 1", "gene_name": "HERK1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SV05-1", "protein_name": "Serine/threonine-protein kinase-like protein At3g51990", "gene_name": "F4F15.100", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FID9-1", "protein_name": "Probable receptor-like protein kinase At5g38990", "gene_name": "K15E6.170", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLJ8-1", "protein_name": "Probable receptor-like protein kinase At5g61350", "gene_name": "MFB13.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJT0-1", "protein_name": "Probable receptor-like protein kinase At2g21480", "gene_name": "F3K23.24", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T020-1", "protein_name": "Probable receptor-like protein kinase At4g39110", "gene_name": "F19H22.210; T22F8.10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCZ4-1", "protein_name": "Receptor-like protein kinase FERONIA", "gene_name": "FER", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22187-1", "protein_name": "Probable receptor-like protein kinase At2g23200", "gene_name": "T20D16.17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80623-1", "protein_name": "Probable receptor-like protein kinase At2g39360", "gene_name": "F12L6.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80963-1", "protein_name": "Serine/threonine-protein kinase-like protein CCR2", "gene_name": "CCR2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FIJ6-1", "protein_name": "Serine/threonine-protein kinase-like protein CCR4", "gene_name": "CCR4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FMY3-1", "protein_name": "Serine/threonine-protein kinase-like protein At5g23170", "gene_name": "MKD15.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LK35-1", "protein_name": "Receptor-like protein kinase THESEUS 1", "gene_name": "THE1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FID5-1", "protein_name": "Probable receptor-like protein kinase At5g39030", "gene_name": "MDS4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FID6-1", "protein_name": "Probable receptor-like protein kinase At5g39020", "gene_name": "MXF12.30", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLW0-1", "protein_name": "Probable receptor-like protein kinase At5g24010", "gene_name": "MZF18.11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3E8W4-1", "protein_name": "Receptor-like protein kinase ANXUR2", "gene_name": "ANX2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LX29-1", "protein_name": "Serine/threonine-protein kinase-like protein ACR4", "gene_name": "ACR4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LY50-1", "protein_name": "Putative serine/threonine-protein kinase-like protein CCR3", "gene_name": "CCR3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S7D9-1", "protein_name": "Serine/threonine-protein kinase-like protein CCR1", "gene_name": "CCR1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SR05-1", "protein_name": "Receptor-like protein kinase ANXUR1", "gene_name": "ANX1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SGN7", "url": "https://www.uniprot.org/uniprotkb/Q9SGN7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.19529822", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 24 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A cluster of ABA-regulated genes on Arabidopsis thaliana BAC T07M07.", "journal": "Genome Res.", "date": "1999", "authors": "Wang M L, Belmonte S, Kim U, Dolan M, Morris J W, Goodman H M", "reference": { "type": "PubMed", "id": "10207155", "url": "https://pubmed.ncbi.nlm.nih.gov/10207155" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SIZ4-1", "protein_name": "Inactive receptor-like serine/threonine-protein kinase At2g40270", "gene_name": "T3G21; T7M7.19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SIZ3-1", "protein_name": "Probable methyltransferase PMT23", "gene_name": "T07M07.16; T3G21.5; T7M7.24", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IH21-1", "protein_name": "Protein trichome birefringence-like 33", "gene_name": "TBL33", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S8E3-1", "protein_name": "Abscisic acid receptor PYL6", "gene_name": "PYL6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XEE6-1", "protein_name": "Zinc finger CCCH domain-containing protein 29", "gene_name": "T07M07.3; T7M7.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SEZ9-1", "protein_name": "Protein trichome birefringence-like 30", "gene_name": "TBL30", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S733-1", "protein_name": "Pentatricopeptide repeat-containing protein At2g40240, mitochondrial", "gene_name": "T3G21; T7M7.22", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SIZ6-1", "protein_name": "GDSL esterase/lipase At2g40250", "gene_name": "T07M07.13; T3G21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XEF0-1", "protein_name": "Transcription factor bHLH51", "gene_name": "BHLH51", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XEE8-1", "protein_name": "Probable protein phosphatase 2C 30", "gene_name": "PP2C5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LFR2-1", "protein_name": "Dehydration-responsive element-binding protein 2C", "gene_name": "DREB2C", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q02973-1", "protein_name": "Em-like protein GEA6", "gene_name": "EM6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94K00-1", "protein_name": "Protein trichome birefringence-like 28", "gene_name": "TBL28", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IGZ2-1", "protein_name": "Protein SMAX1-LIKE 8", "gene_name": "SMXL8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A0MES8-1", "protein_name": "Ethylene-responsive transcription factor ABI4", "gene_name": "ABI4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S756-1", "protein_name": "Ferritin-4, chloroplastic", "gene_name": "FER4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XEE9-1", "protein_name": "GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase", "gene_name": "ALG11", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SIZ4", "url": "https://www.uniprot.org/uniprotkb/Q9SIZ4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.10207155", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 17 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Proteomic approach to identify novel mitochondrial proteins in Arabidopsis.", "journal": "Plant Physiol.", "date": "2001", "authors": "Kruft V, Eubel H, J\u00e4nsch L, Werhahn W, Braun H P", "reference": { "type": "PubMed", "id": "11743114", "url": "https://pubmed.ncbi.nlm.nih.gov/11743114" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M9M9-1", "protein_name": "Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12", "gene_name": "T17B22.21; T17B22_21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38946-1", "protein_name": "Glutamate dehydrogenase 2", "gene_name": "GDH2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P68209-1", "protein_name": "Succinate--CoA ligase [ADP-forming] subunit alpha-1, mitochondrial", "gene_name": "F8L15_30", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P83483-1", "protein_name": "ATP synthase subunit beta-1, mitochondrial", "gene_name": "T2K12.11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P92549-1", "protein_name": "ATP synthase subunit alpha, mitochondrial", "gene_name": "ATPA", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LQI7-1", "protein_name": "Probable complex I intermediate-associated protein 30", "gene_name": "F28G4.19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O82662-1", "protein_name": "Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial", "gene_name": "F11A3.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SX77-1", "protein_name": "Succinate dehydrogenase subunit 5, mitochondrial", "gene_name": "SDH5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZUX4-1", "protein_name": "Uncharacterized protein At2g27730, mitochondrial", "gene_name": "F15K20.17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LAH8-1", "protein_name": "Nucleoside diphosphate kinase IV, chloroplastic/mitochondrial", "gene_name": "NDK4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q96252-1", "protein_name": "ATP synthase subunit delta', mitochondrial", "gene_name": "MQD22.17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLX7-1", "protein_name": "Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial", "gene_name": "MXC20.6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJ12-1", "protein_name": "Probable ATP synthase 24 kDa subunit, mitochondrial", "gene_name": "MGP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZT91-1", "protein_name": "Elongation factor Tu, mitochondrial", "gene_name": "TUFA", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SRH5-1", "protein_name": "Mitochondrial outer membrane protein porin 1", "gene_name": "VDAC1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZP06-1", "protein_name": "Malate dehydrogenase 1, mitochondrial", "gene_name": "F12M16.14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49203-1", "protein_name": "Nucleoside diphosphate kinase III, chloroplastic/mitochondrial", "gene_name": "NDPK3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LHE5-1", "protein_name": "Mitochondrial import receptor subunit TOM40-1", "gene_name": "TOM40-1; TOM40", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O82663-1", "protein_name": "Succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial", "gene_name": "SDH1-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FMV1-1", "protein_name": "Gamma carbonic anhydrase-like 1, mitochondrial", "gene_name": "GAMMACAL1; GAMMA", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q96251-1", "protein_name": "ATP synthase subunit O, mitochondrial", "gene_name": "T22N19.100", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FGI6-1", "protein_name": "NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial", "gene_name": "EMB1467", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FT52-1", "protein_name": "ATP synthase subunit d, mitochondrial", "gene_name": "ATPQ", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LKA5-1", "protein_name": "Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial", "gene_name": "MORF8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LEV3-1", "protein_name": "CBS domain-containing protein CBSX3, mitochondrial", "gene_name": "CBSX3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P83484-1", "protein_name": "ATP synthase subunit beta-2, mitochondrial", "gene_name": "T2K12.9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q42560-1", "protein_name": "Aconitate hydratase 1", "gene_name": "ACO1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SMN1-1", "protein_name": "Gamma carbonic anhydrase-like 2, mitochondrial", "gene_name": "GAMMACAL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P83291-1", "protein_name": "NADH-cytochrome b5 reductase-like protein", "gene_name": "CBR2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M7T0-1", "protein_name": "Peroxiredoxin-2F, mitochondrial", "gene_name": "PRXIIF", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SVM8-1", "protein_name": "Glycine-rich RNA-binding protein 2, mitochondrial", "gene_name": "RBG2; RBGA5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SMX3-1", "protein_name": "Mitochondrial outer membrane protein porin 3", "gene_name": "VDAC3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M9M9", "url": "https://www.uniprot.org/uniprotkb/Q9M9M9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11743114", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 32 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "From genome to function: the Arabidopsis aquaporins.", "journal": "Genome Biol.", "date": "2002", "authors": "Quigley Francoise, Rosenberg Joshua M, Shachar-Hill Yair, Bohnert Hans J", "reference": { "type": "PubMed", "id": "11806824", "url": "https://pubmed.ncbi.nlm.nih.gov/11806824" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M1K3-1", "protein_name": "Probable aquaporin SIP2-1", "gene_name": "SIP2-1; SIP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M8W5-1", "protein_name": "Aquaporin SIP1-1", "gene_name": "SIP1-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P26587-1", "protein_name": "Aquaporin TIP3-1", "gene_name": "TIP3-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q06611-1", "protein_name": "Aquaporin PIP1-2", "gene_name": "PIP1-2; PIP1B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q41975-1", "protein_name": "Probable aquaporin TIP2-2", "gene_name": "TIP2-2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O82598-1", "protein_name": "Aquaporin TIP1-3", "gene_name": "TIP1-3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9STX9-1", "protein_name": "Probable aquaporin TIP5-1", "gene_name": "TIP5-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZV07-1", "protein_name": "Probable aquaporin PIP2-6", "gene_name": "PIP2-6; PIP2E", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W037-1", "protein_name": "Aquaporin NIP2-1", "gene_name": "NIP2-1; NIP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LFP7-1", "protein_name": "Aquaporin NIP1-2", "gene_name": "NIP1-2; NIP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FGL2-1", "protein_name": "Aquaporin TIP2-3", "gene_name": "TIP2-3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SAI4-1", "protein_name": "Aquaporin NIP6-1", "gene_name": "NIP6-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LAI1-1", "protein_name": "Probable aquaporin NIP7-1", "gene_name": "NIP7-1; NIP7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W036-1", "protein_name": "Probable aquaporin NIP4-2", "gene_name": "NIP4-2; NIP4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SV31-1", "protein_name": "Probable aquaporin PIP2-5", "gene_name": "PIP2-5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22588-1", "protein_name": "Probable aquaporin TIP3-2", "gene_name": "TIP3-2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O82316-1", "protein_name": "Aquaporin TIP4-1", "gene_name": "TIP4-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C6T0-1", "protein_name": "Aquaporin NIP3-1", "gene_name": "NIP3-1; NIP3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FIZ9-1", "protein_name": "Putative aquaporin NIP4-1", "gene_name": "NIP4-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZW1-1", "protein_name": "Aquaporin NIP1-1", "gene_name": "NIP1-1; NLM1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P43287-1", "protein_name": "Aquaporin PIP2-2", "gene_name": "PIP2-2; PIP2B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q08733-1", "protein_name": "Aquaporin PIP1-3", "gene_name": "PIP1-3; PIP1C", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P25818-1", "protein_name": "Aquaporin TIP1-1", "gene_name": "TIP1-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P30302-1", "protein_name": "Aquaporin PIP2-3", "gene_name": "PIP2-3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P43286-1", "protein_name": "Aquaporin PIP2-1", "gene_name": "PIP2-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P61837-1", "protein_name": "Aquaporin PIP1-1", "gene_name": "PIP1-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LAA6-1", "protein_name": "Probable aquaporin PIP1-5", "gene_name": "PIP1-5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZVX8-1", "protein_name": "Probable aquaporin PIP2-8", "gene_name": "PIP2-8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FF53-1", "protein_name": "Probable aquaporin PIP2-4", "gene_name": "PIP2-4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FK43-1", "protein_name": "Probable aquaporin SIP1-2", "gene_name": "SIP1-2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39196-1", "protein_name": "Probable aquaporin PIP1-4", "gene_name": "PIP1.4; PIP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P93004-1", "protein_name": "Aquaporin PIP2-7", "gene_name": "PIP2-7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q41951-1", "protein_name": "Aquaporin TIP2-1", "gene_name": "TIP2-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q41963-1", "protein_name": "Aquaporin TIP1-2", "gene_name": "TIP1-2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SV84-1", "protein_name": "Probable aquaporin NIP5-1", "gene_name": "NIP5-1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M1K3", "url": "https://www.uniprot.org/uniprotkb/Q9M1K3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11806824", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 35 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Novel type aquaporin SIPs are mainly localized to the ER membrane and show cell-specific expression in Arabidopsis thaliana.", "journal": "FEBS letters", "date": "2005-10-24", "authors": "Ishikawa Fumiyoshi, Suga Shinobu, Uemura Tomohiro, Sato Masa H, Maeshima Masayoshi", "reference": { "type": "PubMed", "id": "16223486", "url": "https://pubmed.ncbi.nlm.nih.gov/16223486" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M1K3-1", "protein_name": "Probable aquaporin SIP2-1", "gene_name": "SIP2-1; SIP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M8W5-1", "protein_name": "Aquaporin SIP1-1", "gene_name": "SIP1-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FK43-1", "protein_name": "Probable aquaporin SIP1-2", "gene_name": "SIP1-2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M1K3", "url": "https://www.uniprot.org/uniprotkb/Q9M1K3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16223486", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A novel family of plant nuclear envelope-associated proteins.", "journal": "J. Exp. Bot.", "date": "2016", "authors": "Pawar Vidya, Poulet Axel, D\u00e9tourn\u00e9 Gw\u00e9na\u00eblle, Tatout Christophe, Vanrobays Emmanuel, Evans David E, Graumann Katja", "reference": { "type": "PubMed", "id": "27630107", "url": "https://pubmed.ncbi.nlm.nih.gov/27630107" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M9L3-1", "protein_name": "Nuclear envelope-associated protein 1", "gene_name": "ATNEAP1; NEAP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q4PT37-1", "protein_name": "Nuclear envelope-associated protein 3", "gene_name": "ATNEAP3; NEAP3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22873-1", "protein_name": "bZIP transcription factor 18", "gene_name": "BZIP18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K1B4-1", "protein_name": "Nuclear envelope-associated protein 2", "gene_name": "ATNEAP2; NEAP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4I0Z6-1", "protein_name": "Putative nuclear envelope-associated protein 4", "gene_name": "NEAP4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FF75-1", "protein_name": "SUN domain-containing protein 1", "gene_name": "SUN1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SG79-1", "protein_name": "SUN domain-containing protein 2", "gene_name": "SUN2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M9L3", "url": "https://www.uniprot.org/uniprotkb/Q9M9L3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.27630107", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 7 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "An Arabidopsis thaliana pectin acetylesterase gene is upregulated in nematode feeding sites induced by root-knot and cyst nematodes.", "journal": "Mol. Plant Microbe Interact.", "date": "2002", "authors": "Vercauteren Isabel, de Almeida Engler Janice, De Groodt Ruth, Gheysen Godelieve", "reference": { "type": "PubMed", "id": "12026180", "url": "https://pubmed.ncbi.nlm.nih.gov/12026180" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SFF6-1", "protein_name": "Pectin acetylesterase 12", "gene_name": "ATPAE12; PAE12", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SFF6", "url": "https://www.uniprot.org/uniprotkb/Q9SFF6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12026180", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The AP-1 mu adaptin is required for KNOLLE localization at the cell plate to mediate cytokinesis in Arabidopsis.", "journal": "Plant Cell Physiol.", "date": "2013", "authors": "Teh Ooi-Kock, Shimono Yuki, Shirakawa Makoto, Fukao Yoichiro, Tamura Kentaro, Shimada Tomoo, Hara-Nishimura Ikuko", "reference": { "type": "PubMed", "id": "23543752", "url": "https://pubmed.ncbi.nlm.nih.gov/23543752" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SUS3-1", "protein_name": "Beta-adaptin-like protein B", "gene_name": "BETAB-AD", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22715-1", "protein_name": "AP-1 complex subunit mu-2", "gene_name": "AP1M2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81742-1", "protein_name": "Beta-adaptin-like protein C", "gene_name": "BETAC-AD", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZUI6-1", "protein_name": "AP-1 complex subunit gamma-2", "gene_name": "T2K10.12; T2K10_12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LEZ8-1", "protein_name": "AP-1 complex subunit sigma-1", "gene_name": "AAP19-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84K16-1", "protein_name": "AP-1 complex subunit gamma-1", "gene_name": "GAMMA-ADAPTIN; GAMMA-ADR", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SUS3", "url": "https://www.uniprot.org/uniprotkb/Q9SUS3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.23543752", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Proliferative phase endosperm promoters from Arabidopsis thaliana.", "journal": "Plant Biotechnol. J.", "date": "2006", "authors": "Tiwari Sushma, Spielman Melissa, Day Rob C, Scott Rod J", "reference": { "type": "PubMed", "id": "17177805", "url": "https://pubmed.ncbi.nlm.nih.gov/17177805" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SV73-1", "protein_name": "Gamma-interferon-responsive lysosomal thiol protein", "gene_name": "GILT", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SV73", "url": "https://www.uniprot.org/uniprotkb/Q9SV73" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.17177805", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A seed coat outer integument-specific promoter for Brassica napus.", "journal": "Plant Cell Rep.", "date": "2011", "authors": "Wu Limin, El-Mezawy Aliaa, Shah Saleh", "reference": { "type": "PubMed", "id": "21052676", "url": "https://pubmed.ncbi.nlm.nih.gov/21052676" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SV73-1", "protein_name": "Gamma-interferon-responsive lysosomal thiol protein", "gene_name": "GILT", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SV73", "url": "https://www.uniprot.org/uniprotkb/Q9SV73" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.21052676", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arabidopsis PPR40 connects abiotic stress responses to mitochondrial electron transport.", "journal": "Plant Physiol.", "date": "2008", "authors": "Zsigmond Laura, Rig\u00f3 G\u00e1bor, Szarka Andr\u00e1s, Sz\u00e9kely Gy\u00f6ngyi, Otv\u00f6s Krisztina, Darula Zsuzsanna, Medzihradszky Katalin F, Koncz Csaba, Koncz Zsuzsa, Szabados L\u00e1szl\u00f3", "reference": { "type": "PubMed", "id": "18305213", "url": "https://pubmed.ncbi.nlm.nih.gov/18305213" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SUU5-1", "protein_name": "Cytochrome b-c1 complex subunit 7-1, mitochondrial", "gene_name": "QCR7-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P42792-1", "protein_name": "Cytochrome b", "gene_name": "MT-CYB", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FKS5-1", "protein_name": "Cytochrome c1 2, heme protein, mitochondrial", "gene_name": "CYC1-2", 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0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Assembly of chloroplast cytochromes b and c.", "journal": "Biochimie", "date": "2000", "authors": "Nakamoto S S, Hamel P, Merchant S", "reference": { "type": "PubMed", "id": "10946110", "url": "https://pubmed.ncbi.nlm.nih.gov/10946110" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M5P3-1", "protein_name": "Cytochrome c-type biogenesis ccda-like chloroplastic protein", "gene_name": "CCDA", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M5P3", "url": "https://www.uniprot.org/uniprotkb/Q9M5P3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.10946110", "abstract": "", 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Dudley, Hamel Patrice P, Gabilly St\u00e9phane T, Zegzouti Hicham, Perea John V, Alonso Jos\u00e9 M, Ecker Joseph R, Theg Steven M, Christensen Sioux K, Merchant Sabeeha", "reference": { "type": "PubMed", "id": "15159384", "url": "https://pubmed.ncbi.nlm.nih.gov/15159384" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M5P3-1", "protein_name": "Cytochrome c-type biogenesis ccda-like chloroplastic protein", "gene_name": "CCDA", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M5P3", "url": "https://www.uniprot.org/uniprotkb/Q9M5P3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15159384", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", 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"tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SE95", "url": "https://www.uniprot.org/uniprotkb/Q9SE95" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.10929945", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Cullins 3a and 3b assemble with members of the broad complex/tramtrack/bric-a-brac (BTB) protein family to form essential ubiquitin-protein ligases (E3s) in Arabidopsis.", "journal": "J. Biol. Chem.", "date": "2005", "authors": "Gingerich Derek J, Gagne Jennifer M, Salter Donald W, Hellmann Hanjo, Estelle Mark, Ma Ligeng, Vierstra Richard D", "reference": { "type": "PubMed", "id": "15749712", "url": "https://pubmed.ncbi.nlm.nih.gov/15749712" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SE95-1", "protein_name": "FH protein interacting protein FIP2", "gene_name": "FIP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S9Q9-1", "protein_name": "BTB/POZ domain-containing protein At1g30440", "gene_name": "F26G16.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LV01-1", "protein_name": "ETO1-like protein 2", "gene_name": "EOL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6DBN1-1", "protein_name": "BTB/POZ domain-containing protein At4g08455", "gene_name": "T15F16.14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WL52-1", "protein_name": "Phototropic-responsive NPH3 family protein NPY5", "gene_name": "NPY5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XHZ8-1", "protein_name": "BTB/POZ domain-containing protein At1g21780", "gene_name": "F8K7.22", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZVC2-1", "protein_name": "Regulatory protein NPR5", "gene_name": "NPR5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FN67-1", "protein_name": "BTB/POZ domain-containing protein At5g41330", "gene_name": "MYC6.4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FNB3-1", "protein_name": "Putative BTB/POZ domain-containing protein At5g13600", "gene_name": "T6I14.9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LIM6-1", "protein_name": "BTB/POZ domain-containing protein At3g26490", "gene_name": "F20C19.23", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LF66-1", "protein_name": "BTB/POZ domain-containing protein At5g17580", "gene_name": "K10A8.60; 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F2N1.11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22890-1", "protein_name": "Putative BTB/POZ domain-containing protein At2g40450", "gene_name": "T2P4.20; T3G21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22891-1", "protein_name": "Putative BTB/POZ domain-containing protein At2g40440", "gene_name": "T2P4.21; T3G21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O65555-1", "protein_name": "BTB/POZ domain-containing protein At4g30940", "gene_name": "F6I18.150", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81432-1", "protein_name": "Putative BTB/POZ domain-containing protein At4g04090", "gene_name": "T24H24.21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8H1D3-1", "protein_name": "Phototropic-responsive NPH3 family protein NPY1", "gene_name": "NPY1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L765-1", "protein_name": "BTB/POZ and MATH domain-containing protein 1", "gene_name": "BPM1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C9L0-1", "protein_name": "Cullin-3B", "gene_name": "CUL3B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O65020-1", "protein_name": "Ethylene-overproduction protein 1", "gene_name": "ETO1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q5ICL9-1", "protein_name": "Regulatory protein NPR4", "gene_name": "NPR4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L746-1", "protein_name": "Regulatory protein NPR3", "gene_name": "NPR3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FMF5-1", "protein_name": "Root phototropism protein 3", "gene_name": "NPH3; RPT3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P93002-1", "protein_name": "Regulatory protein NPR1", "gene_name": "NPR1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O82343-1", "protein_name": "BTB/POZ domain-containing protein At2g46260", "gene_name": "T3F17.9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FJX5-1", "protein_name": "BTB/POZ and TAZ domain-containing protein 4", "gene_name": "BT4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LFU0-1", "protein_name": "BTB/POZ domain-containing protein DOT3", "gene_name": "DOT3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FKB6-1", "protein_name": "BTB/POZ domain-containing protein At5g48800", "gene_name": "K24G6.13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SZI3-1", "protein_name": "Regulatory protein NPR2", "gene_name": "NPR2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94BN0-1", "protein_name": "BTB/POZ and TAZ domain-containing protein 2", "gene_name": "BT2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q66GP0-1", "protein_name": "BTB/POZ domain-containing protein SR1IP1", "gene_name": "NCH1; SR1IP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q682S0-1", "protein_name": "Root phototropism protein 2", "gene_name": "RPT2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6EJ98-1", "protein_name": "BTB/POZ and TAZ domain-containing protein 5", "gene_name": "BT5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZUH1-1", "protein_name": "BTB/POZ domain-containing protein At2g24240", "gene_name": "F27D4.15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "B7U179-1", "protein_name": "ARMADILLO BTB ARABIDOPSIS PROTEIN 1", "gene_name": "ABAP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "B9DHT4-1", "protein_name": "ARM REPEAT PROTEIN INTERACTING WITH ABF2", "gene_name": "ARIA", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FPW6-1", "protein_name": "BTB/POZ domain-containing protein POB1", "gene_name": "POB1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M1I7-1", "protein_name": "Regulatory protein NPR6", "gene_name": "BOP1; NPR6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SYL0-1", "protein_name": "BTB/POZ and TAZ domain-containing protein 3", "gene_name": "BT3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SE95", "url": "https://www.uniprot.org/uniprotkb/Q9SE95" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15749712", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 78 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arabidopsis thaliana contains a large family of germin-like proteins: characterization of cDNA and genomic sequences encoding 12 unique family members.", "journal": "Plant Mol. Biol.", "date": "1998", "authors": "Carter C, Graham R A, Thornburg R W", "reference": { "type": "PubMed", "id": "9869400", "url": "https://pubmed.ncbi.nlm.nih.gov/9869400" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M263-1", "protein_name": "Germin-like protein subfamily 2 member 4", "gene_name": "GLP10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P92996-1", "protein_name": "Germin-like protein subfamily 1 member 20", "gene_name": "GER2; GLP5A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P94014-1", "protein_name": "Germin-like protein subfamily 2 member 1", "gene_name": "GLP4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P94040-1", "protein_name": "Germin-like protein subfamily 3 member 1", "gene_name": "GLP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P94072-1", "protein_name": "Germin-like protein subfamily 3 member 3", "gene_name": "GER3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P92999-1", "protein_name": "Germin-like protein subfamily 1 member 18", "gene_name": "GLP2A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P92995-1", "protein_name": "Germin-like protein subfamily T member 1", "gene_name": "GLP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P92997-1", "protein_name": "Germin-like protein subfamily 1 member 13", "gene_name": "GLP6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P92998-1", "protein_name": "Germin-like protein subfamily 1 member 1", "gene_name": "GLP7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P93000-1", "protein_name": "Germin-like protein subfamily 2 member 3", "gene_name": "GLP8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LEA7-1", "protein_name": "Germin-like protein subfamily 1 member 8", "gene_name": "GLP9", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M263", "url": "https://www.uniprot.org/uniprotkb/Q9M263" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.9869400", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 11 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Early elicitor induction in members of a novel multigene family coding for highly related RING-H2 proteins in Arabidopsis thaliana.", "journal": "Plant Mol. Biol.", "date": "1999", "authors": "Salinas-Mondrag\u00f3n R E, Garcidue\u00f1as-Pi\u00f1a C, Guzm\u00e1n P", "reference": { "type": "PubMed", "id": "10480382", "url": "https://pubmed.ncbi.nlm.nih.gov/10480382" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LZJ6-1", "protein_name": "RING-H2 finger protein ATL5", "gene_name": "ATL5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LY41-1", "protein_name": "E3 ubiquitin-protein ligase ATL4", "gene_name": "ATL4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XF63-1", "protein_name": "RING-H2 finger protein ATL3", "gene_name": "ATL3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L9T5-1", "protein_name": "RING-H2 finger protein ATL2", "gene_name": "ATL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RXX9-1", "protein_name": "E3 ubiquitin-protein ligase ATL6", "gene_name": "ATL6", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LZJ6", "url": "https://www.uniprot.org/uniprotkb/Q9LZJ6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.10480382", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A novel putative auxin carrier family regulates intracellular auxin homeostasis in plants.", "journal": "Nature", "date": "2012-04-15", "authors": "Barbez Elke, Kube\u0161 Martin, Rol\u010d\u00edk Jakub, B\u00e9ziat Chlo\u00e9, P\u011bn\u010d\u00edk Ale\u0161, Wang Bangjun, Rosquete Michel Ruiz, Zhu Jinsheng, Dobrev Petre I, Lee Yuree, Za\u017e\u00edmalov\u00e0 Eva, Petr\u00e1\u0161ek Jan, Geisler Markus, Friml Ji\u0159\u00ed, Kleine-Vehn J\u00fcrgen", "reference": { "type": "PubMed", "id": "22504182", "url": "https://pubmed.ncbi.nlm.nih.gov/22504182" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LZN2-1", "protein_name": "Protein PIN-LIKES 6", "gene_name": "PILS6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4HWB6-1", "protein_name": "Protein PIN-LIKES 1", "gene_name": "PILS1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C9K5-1", "protein_name": "Protein PIN-LIKES 3", "gene_name": "PILS3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C9K4-1", "protein_name": "Protein PIN-LIKES 4", "gene_name": "PILS4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C999-1", "protein_name": "Protein PIN-LIKES 2", "gene_name": "PILS2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FKY4-1", "protein_name": "Protein PIN-LIKES 7", "gene_name": "PILS7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SHL8-1", "protein_name": "Protein PIN-LIKES 5", "gene_name": "PILS5", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LZN2", "url": "https://www.uniprot.org/uniprotkb/Q9LZN2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.22504182", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 7 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Evolution and structural diversification of PILS putative auxin carriers in plants.", "journal": "Front. Plant Sci.", "date": "2012", "authors": "Feraru Elena, Vosolsob\u011b Stanislav, Feraru Mugurel I, Petr\u00e1\u0161ek Jan, Kleine-Vehn J\u00fcrgen", "reference": { "type": "PubMed", "id": "23091477", "url": "https://pubmed.ncbi.nlm.nih.gov/23091477" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LZN2-1", "protein_name": "Protein PIN-LIKES 6", "gene_name": "PILS6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4HWB6-1", "protein_name": "Protein PIN-LIKES 1", "gene_name": "PILS1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C9K5-1", "protein_name": "Protein PIN-LIKES 3", "gene_name": "PILS3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C9K4-1", "protein_name": "Protein PIN-LIKES 4", "gene_name": "PILS4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C999-1", "protein_name": "Protein PIN-LIKES 2", "gene_name": "PILS2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FKY4-1", "protein_name": "Protein PIN-LIKES 7", "gene_name": "PILS7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SHL8-1", "protein_name": "Protein PIN-LIKES 5", "gene_name": "PILS5", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LZN2", "url": "https://www.uniprot.org/uniprotkb/Q9LZN2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.23091477", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 7 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", 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22", "gene_name": "AHL22", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C9K7-1", "protein_name": "AT-hook motif nuclear-localized protein 29", "gene_name": "AHL29", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S7C9-1", "protein_name": "AT-hook motif nuclear-localized protein 27", "gene_name": "AHL27", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LZX7", "url": "https://www.uniprot.org/uniprotkb/Q9LZX7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.19517252", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, 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"field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The Arabidopsis GNOM ARF-GEF mediates endosomal recycling, auxin transport, and auxin-dependent plant growth.", "journal": "Cell", "date": "2003", "authors": "Geldner Niko, Anders Nadine, Wolters Hanno, Keicher Jutta, Kornberger Wolfgang, Muller Philippe, Delbarre Alain, Ueda Takashi, Nakano Akihiko, J\u00fcrgens Gerd", "reference": { "type": "PubMed", "id": "12553910", "url": "https://pubmed.ncbi.nlm.nih.gov/12553910" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LZX8-1", "protein_name": "Brefeldin 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guanine-nucleotide exchange factor GNOM", "gene_name": "GN", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LZX8", "url": "https://www.uniprot.org/uniprotkb/Q9LZX8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "mutagenesis": [ { "start_pos": 696, "end_pos": 696, "sequence_org": "M", "sequence_mut": "L", "comment": "Confers brefeldin A (BFA) resistance.", "evidence": [ { "database": "UniProtKB", "id": "Q42510", "url": "https://www.uniprot.org/uniprotkb/Q42510" }, { "database": "PubMed", "id": "12553910", "url": "https://pubmed.ncbi.nlm.nih.gov/12553910" } ], "uniprot_canonical_ac": "Q42510-1" } ], "record_id": "pubmed.12553910", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 7 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": 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Biol. Cell", "date": "2004", "authors": "Cox Randal, Mason-Gamer Roberta J, Jackson Catherine L, Segev Nava", "reference": { "type": "PubMed", "id": "14742722", "url": "https://pubmed.ncbi.nlm.nih.gov/14742722" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LZX8-1", "protein_name": "Brefeldin A-inhibited guanine nucleotide-exchange protein 2", "gene_name": "BIG2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K2K3-1", "protein_name": "ARF guanine-nucleotide exchange factor GNL2", "gene_name": "GNL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LPC5-1", "protein_name": "Brefeldin A-inhibited guanine nucleotide-exchange protein 3", "gene_name": "BIG3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JSZ5-1", "protein_name": "Brefeldin A-inhibited guanine nucleotide-exchange protein 1", "gene_name": "BIG1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JN05-1", "protein_name": "Brefeldin A-inhibited guanine nucleotide-exchange protein 4", "gene_name": "BIG4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLY5-1", "protein_name": "ARF guanine-nucleotide exchange factor GNL1", "gene_name": "GNL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q42510-1", "protein_name": "ARF guanine-nucleotide exchange factor GNOM", "gene_name": "GN", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LZX8", "url": "https://www.uniprot.org/uniprotkb/Q9LZX8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.14742722", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 7 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Functional diversification of closely related ARF-GEFs in protein secretion and recycling.", "journal": "Nature", "date": "2007", "authors": "Richter Sandra, Geldner Niko, Schrader Jarmo, Wolters Hanno, Stierhof York-Dieter, Rios Gabino, Koncz Csaba, Robinson David G, J\u00fcrgens Gerd", "reference": { "type": "PubMed", "id": "17653190", "url": "https://pubmed.ncbi.nlm.nih.gov/17653190" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LZX8-1", "protein_name": "Brefeldin 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guanine-nucleotide exchange factor GNOM", "gene_name": "GN", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LZX8", "url": "https://www.uniprot.org/uniprotkb/Q9LZX8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.17653190", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 7 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { 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"protein_name": "Cysteine protease ATG4a", "gene_name": "ATG4A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VYK7-1", "protein_name": "Autophagy-related protein 8f", "gene_name": "ATG8F", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S927-1", "protein_name": "Autophagy-related protein 8c", "gene_name": "ATG8C", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S925-1", "protein_name": "Autophagy-related protein 8h", "gene_name": "ATG8H", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LRP7-1", "protein_name": "Autophagy-related protein 8i", "gene_name": "ATG8I", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XEB5-1", "protein_name": "Autophagy-related protein 8b", "gene_name": "ATG8B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J8V5-1", "protein_name": "Autophagy-related protein 13b", "gene_name": "ATG13B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6R3K8-1", "protein_name": "Probable metal-nicotianamine transporter YSL4", "gene_name": "YSL4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LEM4-1", "protein_name": "Autophagy-related protein 8a", "gene_name": "APG8A; ATG8A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RUS5-1", "protein_name": "Autophagy-related protein 9", "gene_name": "ATG9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S926-1", "protein_name": "Autophagy-related protein 8e", "gene_name": "ATG8E", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SL04-1", "protein_name": "Autophagy-related protein 8d", "gene_name": "ATG8D", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94CD5-1", "protein_name": "Ubiquitin-like modifier-activating enzyme atg7", "gene_name": "ATG7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FFI2-1", "protein_name": "Autophagy protein 5", "gene_name": "ATG5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCK0-1", "protein_name": "Autophagy-related protein 13a", "gene_name": "ATG13A", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LZZ9", "url": "https://www.uniprot.org/uniprotkb/Q9LZZ9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12114572", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 24 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Processing of ATG8s, ubiquitin-like proteins, and their deconjugation by ATG4s are essential for plant autophagy.", "journal": "Plant Cell", "date": "2004", "authors": "Yoshimoto Kohki, Hanaoka Hideki, Sato Shusei, Kato Tomohiko, Tabata Satoshi, Noda Takeshi, Ohsumi Yoshinori", "reference": { "type": "PubMed", "id": "15494556", "url": "https://pubmed.ncbi.nlm.nih.gov/15494556" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LZZ9-1", "protein_name": "Autophagy-related protein 8g", "gene_name": "ATG8G", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M1Y0-1", "protein_name": "Cysteine protease ATG4b", "gene_name": "ATG4B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S929-1", "protein_name": "Cysteine protease ATG4a", "gene_name": "ATG4A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VYK7-1", "protein_name": "Autophagy-related protein 8f", "gene_name": "ATG8F", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S927-1", "protein_name": "Autophagy-related protein 8c", "gene_name": "ATG8C", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S925-1", "protein_name": "Autophagy-related protein 8h", "gene_name": "ATG8H", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LRP7-1", "protein_name": "Autophagy-related protein 8i", "gene_name": "ATG8I", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XEB5-1", "protein_name": "Autophagy-related protein 8b", "gene_name": "ATG8B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LEM4-1", "protein_name": "Autophagy-related protein 8a", "gene_name": "APG8A; ATG8A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S926-1", "protein_name": "Autophagy-related protein 8e", "gene_name": "ATG8E", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SL04-1", "protein_name": "Autophagy-related protein 8d", "gene_name": "ATG8D", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LZZ9", "url": "https://www.uniprot.org/uniprotkb/Q9LZZ9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15494556", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 11 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The pyruvate decarboxylase1 gene of Arabidopsis is required during anoxia but not other environmental stresses.", "journal": "Plant Physiol.", "date": "2003", "authors": "K\u00fcrsteiner Oliver, Dupuis Isabelle, Kuhlemeier Cris", "reference": { "type": "PubMed", "id": "12805625", "url": "https://pubmed.ncbi.nlm.nih.gov/12805625" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M039-1", "protein_name": "Pyruvate decarboxylase 3", "gene_name": "PDC3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M040-1", "protein_name": "Pyruvate decarboxylase 4", "gene_name": "PDC4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O82647-1", "protein_name": "Pyruvate decarboxylase 1", "gene_name": "PDC1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FFT4-1", "protein_name": "Pyruvate decarboxylase 2", "gene_name": "PDC2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M039", "url": "https://www.uniprot.org/uniprotkb/Q9M039" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12805625", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Evidence for an ancient chromosomal duplication in Arabidopsis thaliana by sequencing and analyzing a 400-kb contig at the APETALA2 locus on chromosome 4.", "journal": "FEBS Lett.", "date": "1999", "authors": "Terryn N, Heijnen L, De Keyser A, Van Asseldonck M, De Clercq R, Verbakel H, Gielen J, Zabeau M, Villarroel R, Jesse T, Neyt P, Hogers R, Van Den Daele H, Ardiles W, Schueller C, Mayer K, D\u00e9hais P, Rombauts S, Van Montagu M, Rouz\u00e9 P, Vos P", "reference": { "type": "PubMed", "id": "10094464", "url": "https://pubmed.ncbi.nlm.nih.gov/10094464" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M065-1", "protein_name": "Small ribosomal subunit protein mL103 (rPPR7)", "gene_name": "AP22.65; C7A10.680", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SW63-1", "protein_name": "Ethylene-responsive transcription factor RAP2-10", "gene_name": "RAP2-10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23179-1", "protein_name": "Patatin-like protein 1", "gene_name": "PLP1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M065", "url": "https://www.uniprot.org/uniprotkb/Q9M065" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.10094464", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { 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"field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Evidence for the involvement of the Arabidopsis SEC24A in male transmission.", "journal": "J. Exp. Bot.", "date": "2011", "authors": "Conger Renata, Chen Yani, Fornaciari Silvia, Faso Carmen, Held Michael A, Renna Luciana, Brandizzi Federica", "reference": { "type": "PubMed", "id": "21705385", "url": "https://pubmed.ncbi.nlm.nih.gov/21705385" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M081-1", "protein_name": "Protein transport protein SEC24 C", "gene_name": "SEC24C", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M291-1", "protein_name": "Protein transport protein SEC24 B", "gene_name": "CEF; SEC24B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SFU0-1", "protein_name": "Protein transport protein SEC24 A", "gene_name": "SEC24A", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M081", "url": "https://www.uniprot.org/uniprotkb/Q9M081" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.21705385", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arabidopsis eIF3e interacts with subunits of the ribosome, Cop9 signalosome and proteasome.", "journal": "Plant Signal. Behav.", "date": "2008", "authors": "Paz-Aviram Tal, Yahalom Avital, Chamovitz Daniel A", "reference": { "type": "PubMed", "id": "19704582", "url": "https://pubmed.ncbi.nlm.nih.gov/19704582" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M098-1", "protein_name": "Nucleoid-associated protein At4g30620, chloroplastic", "gene_name": "F17I23.40", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LXG1-1", "protein_name": "Small ribosomal subunit protein uS4z", "gene_name": "RPS9B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W1P0-1", "protein_name": "COP9 signalosome complex subunit 6b", "gene_name": "CSN6B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SGW3-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 8 homolog A", "gene_name": "RPN12A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W206-1", "protein_name": "COP9 signalosome complex subunit 6a", "gene_name": "CSN6A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C5Z3-1", "protein_name": "Eukaryotic translation initiation factor 3 subunit E", "gene_name": "TIF3E1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94JU3-1", "protein_name": "COP9 signalosome complex subunit 7", "gene_name": "CSN7; FUS5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P43255-1", "protein_name": "COP9 signalosome complex subunit 8", "gene_name": "CSN8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P45432-1", "protein_name": "COP9 signalosome complex subunit 1", "gene_name": "CSN1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L5U0-1", "protein_name": "COP9 signalosome complex subunit 4", "gene_name": "CSN4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C7F9-1", "protein_name": "Arabinogalactan O-methyltransferase 1", "gene_name": "AGM1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLF0-1", "protein_name": "Small ribosomal subunit protein uS4y", "gene_name": "RPS9C", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M098", "url": "https://www.uniprot.org/uniprotkb/Q9M098" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.19704582", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 12 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of 118 Arabidopsis transcription factor and 30 ubiquitin-ligase genes responding to chitin, a plant-defense elicitor.", "journal": "Mol. Plant Microbe Interact.", "date": "2007", "authors": "Libault Marc, Wan Jinrong, Czechowski Tomasz, Udvardi Michael, Stacey Gary", "reference": { "type": "PubMed", "id": "17722694", "url": "https://pubmed.ncbi.nlm.nih.gov/17722694" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M0C3-1", "protein_name": "RING-H2 finger protein ATL14", "gene_name": "ATL14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L9T5-1", "protein_name": "RING-H2 finger protein ATL2", "gene_name": "ATL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LF65-1", "protein_name": "RING-H2 finger protein ATL17", "gene_name": "ATL17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LM69-1", "protein_name": "RING-H2 finger protein ATL80", "gene_name": "ATL80", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZT49-1", "protein_name": "Probable E3 ubiquitin-protein ligase ATL45", "gene_name": "ATL45", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LBA0-1", "protein_name": "NEP1-interacting protein-like 2", "gene_name": "ATL24", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LGA5-1", "protein_name": "E3 ubiquitin-protein ligase ATL31", "gene_name": "ATL31", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RXX9-1", "protein_name": "E3 ubiquitin-protein ligase ATL6", "gene_name": "ATL6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C598-1", "protein_name": "Protein ATAF2", "gene_name": "NAC081", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FKX5-1", "protein_name": "NEP1-interacting protein-like 1", "gene_name": "ATARRE; ATL27", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LX93-1", "protein_name": "E3 ubiquitin-protein ligase RING1", "gene_name": "ATL55", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SL41-1", "protein_name": "NAC domain-containing protein 37", "gene_name": "NAC037; VND1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M0C3", "url": "https://www.uniprot.org/uniprotkb/Q9M0C3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.17722694", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 12 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Functional redundancy in the control of seedling growth by the karrikin signaling pathway.", "journal": "Planta", "date": "2016-06", "authors": "Stanga John P, Morffy Nicholas, Nelson David C", "reference": { "type": "PubMed", "id": "26754282", "url": "https://pubmed.ncbi.nlm.nih.gov/26754282" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M0C5-1", "protein_name": "Protein SMAX1-LIKE 2", "gene_name": "SMXL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FHH2-1", "protein_name": "Protein SUPPRESSOR OF MAX2 1", "gene_name": "SMAX1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M0C5", "url": "https://www.uniprot.org/uniprotkb/Q9M0C5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.26754282", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A plant orthologue of RNase L inhibitor (RLI) is induced in plants showing RNA interference.", "journal": "J. Mol. Evol.", "date": "2004", "authors": "Braz Antonio Sergio Kimus, Finnegan Jean, Waterhouse Peter, Margis Rog\u00e9rio", "reference": { "type": "PubMed", "id": "15383904", "url": "https://pubmed.ncbi.nlm.nih.gov/15383904" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M0D0-1", "protein_name": "ABC transporter E family member 3", "gene_name": "ABCE3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LPJ4-1", "protein_name": "ABC transporter E family member 2", "gene_name": "ABCE2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LID6-1", "protein_name": "ABC transporter E family member 1", "gene_name": "ABCE1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M0D0", "url": "https://www.uniprot.org/uniprotkb/Q9M0D0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15383904", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Multiple DNA methyltransferase genes in Arabidopsis thaliana.", "journal": "Plant Mol. Biol.", "date": "1999", "authors": "Genger R K, Kovac K A, Dennis E S, Peacock W J, Finnegan E J", "reference": { "type": "PubMed", "id": "10579493", "url": "https://pubmed.ncbi.nlm.nih.gov/10579493" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M0S8-1", "protein_name": "DNA (cytosine-5)-methyltransferase 2", "gene_name": "MET2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23273-1", "protein_name": "DNA (cytosine-5)-methyltransferase 4", "gene_name": "MET4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T0I1-1", "protein_name": "DNA (cytosine-5)-methyltransferase 3", "gene_name": "MET3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M0S8", "url": "https://www.uniprot.org/uniprotkb/Q9M0S8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.10579493", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Regulation of imprinted gene expression in Arabidopsis endosperm.", "journal": "Proc. Natl. Acad. Sci. U.S.A.", "date": "2011", "authors": "Hsieh Tzung-Fu, Shin Juhyun, Uzawa Rie, Silva Pedro, Cohen Stephanie, Bauer Matthew J, Hashimoto Meryl, Kirkbride Ryan C, Harada John J, Zilberman Daniel, Fischer Robert L", "reference": { "type": "PubMed", "id": "21257907", "url": "https://pubmed.ncbi.nlm.nih.gov/21257907" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M0S8-1", "protein_name": "DNA (cytosine-5)-methyltransferase 2", "gene_name": "MET2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SZ59-1", "protein_name": "Protein ADMETOS", "gene_name": "ADM", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23273-1", "protein_name": "DNA (cytosine-5)-methyltransferase 4", "gene_name": "MET4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T0I1-1", "protein_name": "DNA (cytosine-5)-methyltransferase 3", "gene_name": "MET3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M0S8", "url": "https://www.uniprot.org/uniprotkb/Q9M0S8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.21257907", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "F-box proteins in Arabidopsis.", "journal": "Trends Plant Sci.", "date": "2000", "authors": "Xiao W, Jang J", "reference": { "type": "PubMed", "id": "11077244", "url": "https://pubmed.ncbi.nlm.nih.gov/11077244" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M0U9-1", "protein_name": "F-box protein SKIP19", "gene_name": "SKIP19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84X43-1", "protein_name": "F-box only protein 8", "gene_name": "FBX8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M0U8-1", "protein_name": "Putative F-box/LRR-repeat protein 21", "gene_name": "FBL21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M0U6-1", "protein_name": "Putative F-box/LRR-repeat protein 22", "gene_name": "FBL22", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S9V1-1", "protein_name": "Putative F-box only protein 15", "gene_name": "FBX15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S9V8-1", "protein_name": "Putative F-box/LRR-repeat protein 9", "gene_name": "FBL9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S9V9-1", "protein_name": "Putative F-box/LRR-repeat protein 23", "gene_name": "FBL23", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FZK1-1", "protein_name": "F-box only protein 6", "gene_name": "FBX6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SMZ3-1", "protein_name": "F-box only protein 13", "gene_name": "FBX13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SI34-1", "protein_name": "Putative F-box only protein 9", "gene_name": "FBX9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SYD0-1", "protein_name": "Putative F-box only protein 10", "gene_name": "FBX10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SYD4-1", "protein_name": "Putative F-box only protein 11", "gene_name": "FBX11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZPS0-1", "protein_name": "F-box only protein 7", "gene_name": "FBX7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O04197-1", "protein_name": "Coronatine-insensitive protein 1", "gene_name": "COI1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SKK0-1", "protein_name": "EIN3-binding F-box protein 1", "gene_name": "EBF1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22161-1", "protein_name": "Protein ARABIDILLO 1", "gene_name": "FBX5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M096-1", "protein_name": "Putative F-box/LRR-repeat protein 19", "gene_name": "FBL19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SRR1-1", "protein_name": "F-box/LRR-repeat protein 12", "gene_name": "FBL12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SDA8-1", "protein_name": "F-box/LRR-repeat protein 10", "gene_name": "FBL10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S9X4-1", "protein_name": "Putative F-box/LRR-repeat protein 8", "gene_name": "FBL8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SMY8-1", "protein_name": "F-box/LRR-repeat protein 15", "gene_name": "FBL15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SN10-1", "protein_name": "F-box/LRR-repeat protein 16", "gene_name": "FBL16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3EC97-1", "protein_name": "F-box/LRR-repeat protein 14", "gene_name": "FBL14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q1PE04-1", "protein_name": "F-box/LRR-repeat protein 25", "gene_name": "FBL25", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RWU5-1", "protein_name": "F-box/LRR-repeat protein 3", "gene_name": "FBL3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SIM9-1", "protein_name": "F-box protein MAX2", "gene_name": "MAX2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZR12-1", "protein_name": "GRR1-like protein 1", "gene_name": "GRH1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49286-1", "protein_name": "F-box protein SKP2B", "gene_name": "SKP2B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O64511-1", "protein_name": "Protein TWIN LOV 1", "gene_name": "PLPB; TLP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q4PSN6-1", "protein_name": "F-box/WD-40 repeat-containing protein 1", "gene_name": "FBW1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S8F2-1", "protein_name": "BTB/POZ domain-containing protein FBL11", "gene_name": "FBL11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94A20-1", "protein_name": "BI1-like protein", "gene_name": "LFG5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C5D2-1", "protein_name": "F-box/LRR-repeat protein 4", "gene_name": "FBL4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0C2C9-1", "protein_name": "F-box only protein 12", "gene_name": "FBX12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FWZ1-1", "protein_name": "F-box/LRR-repeat protein 13", "gene_name": "FBL13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W420-1", "protein_name": "Adagio protein 2", "gene_name": "ADO2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49279-1", "protein_name": "SKP1-interacting partner 15", "gene_name": "SKIP15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94BT6-1", "protein_name": "Adagio protein 1", "gene_name": "ADO1; ZTL", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39090-1", "protein_name": "Protein UNUSUAL FLORAL ORGANS", "gene_name": "UFO", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C9W9-1", "protein_name": "Adagio protein 3", "gene_name": "ADO3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZPE4-1", "protein_name": "F-box protein FBW2", "gene_name": "FBW2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q570C0-1", "protein_name": "Protein TRANSPORT INHIBITOR RESPONSE 1", "gene_name": "TIR1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RWQ8-1", "protein_name": "F-box protein FBX14", "gene_name": "FBX14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W104-1", "protein_name": "F-box/LRR-repeat protein 17", "gene_name": "FBL17", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M0U9", "url": "https://www.uniprot.org/uniprotkb/Q9M0U9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11077244", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 44 } ], "sort_fields": [ 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Characterization of three novel members of the Arabidopsis thaliana equilibrative nucleoside transporter (ENT) family.", "journal": "The Biochemical journal", "date": "2004-10-01", "authors": "Wormit Alexandra, Traub Michaela, Fl\u00f6rchinger Martin, Neuhaus H Ekkehard, M\u00f6hlmann Torsten", "reference": { "type": "PubMed", "id": "15228386", "url": "https://pubmed.ncbi.nlm.nih.gov/15228386" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": 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Rui, Wang Yuhan, Zheng Hao, Lu Wei, Wu Changai, Huang Jinguang, Yan Kang, Yang Guodong, Zheng Chengchao", "reference": { "type": "PubMed", "id": "26139822", "url": "https://pubmed.ncbi.nlm.nih.gov/26139822" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M0Y5-1", "protein_name": "Transcription factor MYB74", "gene_name": "MYB74", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M0Y5", "url": "https://www.uniprot.org/uniprotkb/Q9M0Y5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.26139822", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A genome-wide analysis of Arabidopsis Rop-interactive CRIB motif-containing proteins that act as Rop GTPase targets.", "journal": "The Plant cell", "date": "2001-12", "authors": "Wu G, Gu Y, Li S, Yang Z", "reference": { "type": "PubMed", "id": "11752391", "url": "https://pubmed.ncbi.nlm.nih.gov/11752391" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M0Y9-1", "protein_name": "CRIB domain-containing protein RIC10", "gene_name": "RIC10", "tax_name": "Mouse-ear cress" }, { 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"tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZWB8-1", "protein_name": "CRIB domain-containing protein RIC8", "gene_name": "RIC8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4I5N6-1", "protein_name": "CRIB domain-containing protein RIC3", "gene_name": "RIC3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IVV0-1", "protein_name": "CRIB domain-containing protein RIC1", "gene_name": "RIC1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M0Y9", "url": "https://www.uniprot.org/uniprotkb/Q9M0Y9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "mutagenesis": [ { "start_pos": 37, "end_pos": 37, "sequence_org": "H", "sequence_mut": "D", "comment": "Loss of interaction with ARAC11/ROP1.", "evidence": [ { "database": "UniProtKB", "id": "F4IVV0", "url": 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"sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Nitrate efflux at the root plasma membrane: identification of an Arabidopsis excretion transporter.", "journal": "Plant Cell", "date": "2007", "authors": "Segonzac C\u00e9cile, Boyer Jean-Christophe, Ipotesi Emilie, Szponarski Wojciech, Tillard Pascal, Touraine Brigitte, Sommerer Nicolas, Rossignol Michel, Gibrat R\u00e9my", "reference": { "type": "PubMed", "id": "17993627", "url": "https://pubmed.ncbi.nlm.nih.gov/17993627" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M172-1", "protein_name": "Protein NRT1/ PTR FAMILY 2.5", "gene_name": "NPF2.5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M173-1", "protein_name": "Protein NRT1/ PTR FAMILY 2.4", "gene_name": "NPF2.4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M175-1", "protein_name": "Protein NRT1/ PTR FAMILY 2.3", "gene_name": "NPF2.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M1E1-1", "protein_name": "Protein NRT1/ PTR FAMILY 2.6", "gene_name": "NPF2.6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M171-1", "protein_name": "Protein NRT1/ PTR FAMILY 2.1", "gene_name": "NPF2.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M174-1", "protein_name": "Putative protein NRT1/ PTR FAMILY 2.2", "gene_name": "NPF2.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M1E2-1", "protein_name": "Protein NRT1/ PTR FAMILY 2.7", "gene_name": "NPF2.7; NPF27", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M172", "url": "https://www.uniprot.org/uniprotkb/Q9M172" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.17993627", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 7 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Nematode-induced changes of transporter gene expression in Arabidopsis roots.", "journal": "Mol. Plant Microbe Interact.", "date": "2005", "authors": "Hammes Ulrich Z, Schachtman Daniel P, Berg R Howard, Nielsen Erik, Koch Wolfgang, McIntyre Lauren M, Taylor Christopher G", "reference": { "type": "PubMed", "id": "16478044", "url": "https://pubmed.ncbi.nlm.nih.gov/16478044" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M175-1", "protein_name": "Protein NRT1/ PTR FAMILY 2.3", "gene_name": "NPF2.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LFR1-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.8", "gene_name": "NPF5.8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RWN2-1", "protein_name": "Protein ZINC INDUCED FACILITATOR 1", "gene_name": "ZIF1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93VV5-1", "protein_name": "Protein NRT1/ PTR FAMILY 4.3", "gene_name": "NPF4.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZR7-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.1", "gene_name": "NPF5.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8H157-1", "protein_name": "Protein NRT1/ PTR FAMILY 4.6", "gene_name": "NPF4.6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C7U1-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.12", "gene_name": "NPF5.12", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M175", "url": "https://www.uniprot.org/uniprotkb/Q9M175" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16478044", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 7 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Cochaperonin CPN20 negatively regulates abscisic acid signaling in Arabidopsis.", "journal": "Plant Mol. Biol.", "date": "2013", "authors": "Zhang Xiao-Feng, Jiang Tao, Wu Zhen, Du Shu-Yuan, Yu Yong-Tao, Jiang Shang-Chuan, Lu Kai, Feng Xiu-Jing, Wang Xiao-Fang, Zhang Da-Peng", "reference": { "type": "PubMed", "id": "23783410", "url": "https://pubmed.ncbi.nlm.nih.gov/23783410" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M1C2-1", "protein_name": "10 kDa chaperonin 1, chloroplastic", "gene_name": "CPN10-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80504-1", "protein_name": "10 kDa chaperonin 2, chloroplastic", "gene_name": "CPN10-2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O65282-1", "protein_name": "20 kDa chaperonin, chloroplastic", "gene_name": "CPN20", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M1C2", "url": "https://www.uniprot.org/uniprotkb/Q9M1C2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.23783410", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "MUN (MERISTEM UNSTRUCTURED), encoding a SPC24 homolog of NDC80 kinetochore complex, affects development through cell division in Arabidopsis thaliana.", "journal": "The Plant journal : for cell and molecular biology", "date": "2018-03", "authors": "Shin Jinwoo, Jeong Goowon, Park Jong-Yoon, Kim Hoyeun, Lee Ilha", "reference": { "type": "PubMed", "id": "29356153", "url": "https://pubmed.ncbi.nlm.nih.gov/29356153" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M1G5-1", "protein_name": "Kinetochore protein NDC80 homolog", "gene_name": "NDC80", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RXJ0-1", "protein_name": "Kinetochore protein NUF2 homolog", "gene_name": "NUF2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93VK9-1", "protein_name": "Kinetochore protein SPC25 homolog", "gene_name": "SPC25", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q67XT3-1", "protein_name": "Kinetochore protein SPC24 homolog", "gene_name": "SPC24", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M1G5", "url": "https://www.uniprot.org/uniprotkb/Q9M1G5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.29356153", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Subunit compositions of the RNA-silencing enzymes Pol IV and Pol V reveal their origins as specialized forms of RNA polymerase II.", "journal": "Mol. Cell", "date": "2009", "authors": "Ream Thomas S, Haag Jeremy R, Wierzbicki Andrzej T, Nicora Carrie D, Norbeck Angela D, Zhu Jian-Kang, Hagen Gretchen, Guilfoyle Thomas J, Pasa-Toli\u0107 Ljiljana, Pikaard Craig S", "reference": { "type": "PubMed", "id": "19110459", "url": "https://pubmed.ncbi.nlm.nih.gov/19110459" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M1H8-1", "protein_name": "DNA-directed RNA polymerase V subunit 5C", "gene_name": "NRPE5C", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39212-1", "protein_name": "DNA-directed RNA polymerases IV and V subunit 3B", "gene_name": "NRPD3B; NRPE3B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38859-1", "protein_name": "DNA-directed RNA polymerases II, IV and V subunit 11", "gene_name": "NRPB11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A6QRA1-1", "protein_name": "DNA-directed RNA polymerase V subunit 7", "gene_name": "NRPE7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M1A8-1", "protein_name": "DNA-directed RNA polymerases II, IV and V subunit 8B", "gene_name": "NRPB8B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FJL8-1", "protein_name": "DNA-directed RNA polymerase subunit 5-like protein 1", "gene_name": "NRPB5L1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O48890-1", "protein_name": "DNA-directed RNA polymerase II subunit 4", "gene_name": "NRPB4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81097-1", "protein_name": "DNA-directed RNA polymerases II and V subunit 8A", "gene_name": "NRPB8A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81098-1", "protein_name": "DNA-directed RNA polymerases II and IV subunit 5A", "gene_name": "NRPB5A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SYA6-1", "protein_name": "DNA-directed RNA polymerase subunit 10-like protein", "gene_name": "NRPB10L", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LFJ6-1", "protein_name": "DNA-directed RNA polymerases II, IV and V subunit 10", "gene_name": "NRPB10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLM8-1", "protein_name": "DNA-directed RNA polymerases II, IV and V subunit 12", "gene_name": "NRPB12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LE42-1", "protein_name": "DNA-directed RNA polymerase IV subunit 7", "gene_name": "NRPD7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P38421-1", "protein_name": "DNA-directed RNA polymerase II subunit 7", "gene_name": "NRPB7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6NML5-1", "protein_name": "DNA-directed RNA polymerase subunit 7-like protein", "gene_name": "NRPB7L", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C8M4-1", "protein_name": "DNA-directed RNA polymerase subunit 12-like protein", "gene_name": "NRPB12L", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L5V0-1", "protein_name": "DNA-directed RNA polymerases II, IV and V subunit 9B", "gene_name": "NRPB9B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P18616-1", "protein_name": "DNA-directed RNA polymerase II subunit RPB1", "gene_name": "NRPB1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P38420-1", "protein_name": "DNA-directed RNA polymerase II subunit 2", "gene_name": "NRPB2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LQ02-1", "protein_name": "DNA-directed RNA polymerase IV subunit 1", "gene_name": "NRPD1A; NRPD1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LK40-1", "protein_name": "DNA-directed RNA polymerases IV and V subunit 2", "gene_name": "NRPD2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39211-1", "protein_name": "DNA-directed RNA polymerases II, IV and V subunit 3", "gene_name": "NRPB3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q5D869-1", "protein_name": "DNA-directed RNA polymerase V subunit 1", "gene_name": "NRPD1B; NRPE1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6DBA5-1", "protein_name": "DNA-directed RNA polymerases IV and V subunit 4", "gene_name": "NRPD4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6NLH0-1", "protein_name": "DNA-directed RNA polymerases II, IV and V subunit 9A", "gene_name": "NRPB9A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FJ98-1", "protein_name": "DNA-directed RNA polymerases II, IV and V subunit 6A", "gene_name": "NRPB6A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M1J2-1", "protein_name": "DNA-directed RNA polymerase V subunit 5A", "gene_name": "NRPE5A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJ96-1", "protein_name": "DNA-directed RNA polymerases II and V subunit 6B", "gene_name": "NRPB6B", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M1H8", "url": "https://www.uniprot.org/uniprotkb/Q9M1H8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.19110459", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 28 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "PolV(PolIVb) function in RNA-directed DNA methylation requires the conserved active site and an additional plant-specific subunit.", "journal": "Proc. Natl. Acad. Sci. 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"journal": "The Plant cell", "date": "2005-11", "authors": "Mitsuda Nobutaka, Seki Motoaki, Shinozaki Kazuo, Ohme-Takagi Masaru", "reference": { "type": "PubMed", "id": "16214898", "url": "https://pubmed.ncbi.nlm.nih.gov/16214898" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M274-1", "protein_name": "NAC domain-containing protein 66", "gene_name": "NAC066", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84WP6-1", "protein_name": "NAC domain-containing protein 43", "gene_name": "NAC043", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M274", "url": "https://www.uniprot.org/uniprotkb/Q9M274" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16214898", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], 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"n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Members of a small family of nodulin-like genes are regulated under iron deficiency in roots of Arabidopsis thaliana.", "journal": "Plant physiology and biochemistry : PPB", "date": "2011-05", "authors": "Gollhofer Julia, Schl\u00e4wicke Christin, Jungnick Nadine, Schmidt Wolfgang, Buckhout Thomas J", "reference": { "type": "PubMed", "id": "21411332", "url": "https://pubmed.ncbi.nlm.nih.gov/21411332" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M2C3-1", "protein_name": "Vacuolar iron transporter homolog 3", "gene_name": "F22J12.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M2C0-1", "protein_name": "Vacuolar iron transporter homolog 4", "gene_name": "F23N14.40", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SRD3-1", "protein_name": "Vacuolar iron transporter homolog 2", "gene_name": "VTL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LPU9-1", "protein_name": "Vacuolar iron transporter homolog 1", "gene_name": "VTL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSF6-1", "protein_name": "Vacuolar iron transporter homolog 2.1", "gene_name": "VTL5", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M2C3", "url": "https://www.uniprot.org/uniprotkb/Q9M2C3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.21411332", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The ASYMMETRIC LEAVES2 gene of Arabidopsis thaliana, required for formation of a symmetric flat leaf lamina, encodes a member of a novel family of proteins characterized by cysteine repeats and a leucine zipper.", "journal": "Plant Cell Physiol.", "date": "2002", "authors": "Iwakawa Hidekazu, Ueno Yoshihisa, Semiarti Endang, Onouchi Hitoshi, Kojima Shoko, Tsukaya Hirokazu, Hasebe Mitsuyasu, Soma Teppei, Ikezaki Masaya, Machida Chiyoko, Machida Yasunori", "reference": { "type": "PubMed", "id": "12040093", "url": "https://pubmed.ncbi.nlm.nih.gov/12040093" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M2J7-1", "protein_name": "LOB domain-containing protein 29", "gene_name": "LBD29", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SLB6-1", "protein_name": "LOB domain-containing protein 17", "gene_name": "LBD17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P59468-1", "protein_name": "LOB domain-containing protein 24", "gene_name": "LBD24", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LHS8-1", "protein_name": "LOB domain-containing protein 33", "gene_name": "LBD33", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LIJ0-1", "protein_name": "LOB domain-containing protein 26", "gene_name": "LBD26", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LNB9-1", "protein_name": "LOB domain-containing protein 2", "gene_name": "LBD2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LQR0-1", "protein_name": "LOB domain-containing protein 1", "gene_name": "LBD1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LRW1-1", "protein_name": "LOB domain-containing protein 22", "gene_name": "LBD22", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O04479-1", "protein_name": "Protein ASYMMETRIC LEAVES 2", "gene_name": "AS2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22131-1", "protein_name": "LOB domain-containing protein 18", "gene_name": "LBD18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P59467-1", "protein_name": "LOB domain-containing protein 23", "gene_name": "LBD23", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M886-1", "protein_name": "LOB domain-containing protein 41", "gene_name": "LBD41", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SA51-1", "protein_name": "LOB domain-containing protein 3", "gene_name": "LBD3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCS4-1", "protein_name": "LOB domain-containing protein 28", "gene_name": "LBD28", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SK08-1", "protein_name": "LOB domain-containing protein 11", "gene_name": "LBD11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SRL8-1", "protein_name": "LOB domain-containing protein 21", "gene_name": "LBD21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SSM9-1", "protein_name": "LOB domain-containing protein 7", "gene_name": "LBD7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SZE8-1", "protein_name": "LOB domain-containing protein 39", "gene_name": "LBD39", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L5T5-1", "protein_name": "LOB domain-containing protein 15", "gene_name": "LBD15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SRV3-1", "protein_name": "LOB domain-containing protein 20", "gene_name": "LBD20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LBW3-1", "protein_name": "LOB domain-containing protein 12", "gene_name": "LBD12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FKZ3-1", "protein_name": "LOB domain-containing protein 36", "gene_name": "LBD36", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9STS6-1", "protein_name": "LOB domain-containing protein 27", "gene_name": "LBD27", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L8Q3-1", "protein_name": "LOB domain-containing protein 25", "gene_name": "LBD25", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C8V8-1", "protein_name": "LOB domain-containing protein 5", "gene_name": "LBD5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FFL3-1", "protein_name": "LOB domain-containing protein 35", "gene_name": "LBD35", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22132-1", "protein_name": "LOB domain-containing protein 19", "gene_name": "LBD19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49651-1", "protein_name": "LOB domain-containing protein 32", "gene_name": "LBD32", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O64836-1", "protein_name": "LOB domain-containing protein 10", "gene_name": "LBD10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81322-1", "protein_name": "LOB domain-containing protein 31", "gene_name": "LBD31", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O82198-1", "protein_name": "LOB domain-containing protein 9", "gene_name": "LBD9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81323-1", "protein_name": "LOB domain-containing protein 30", "gene_name": "LBD30", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FML4-1", "protein_name": "Protein LATERAL ORGAN BOUNDARIES", "gene_name": "LOB", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SHE9-1", "protein_name": "LOB domain-containing protein 4", "gene_name": "LBD4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJW5-1", "protein_name": "LOB domain-containing protein 14", "gene_name": "LBD14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FN11-1", "protein_name": "LOB domain-containing protein 37", "gene_name": "LBD37", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9AT61-1", "protein_name": "LOB domain-containing protein 13", "gene_name": "LBD13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZUP0-1", "protein_name": "LOB domain-containing protein 8", "gene_name": "LBD8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZW96-1", "protein_name": "LOB domain-containing protein 40", "gene_name": "LBD40", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SN23-1", "protein_name": "LOB domain-containing protein 38", "gene_name": "LBD38", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CA30-1", "protein_name": "LOB domain-containing protein 42", "gene_name": "LBD42", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SLB7-1", "protein_name": "LOB domain-containing protein 16", "gene_name": "LBD16", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M2J7", "url": "https://www.uniprot.org/uniprotkb/Q9M2J7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": 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{ "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The LATERAL ORGAN BOUNDARIES gene defines a novel, plant-specific gene family.", "journal": "Plant Physiol.", "date": "2002", "authors": "Shuai Bin, Reynaga-Pe\u00f1a Cristina G, Springer Patricia S", "reference": { "type": "PubMed", "id": "12068116", "url": "https://pubmed.ncbi.nlm.nih.gov/12068116" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M2J7-1", "protein_name": "LOB domain-containing protein 29", "gene_name": "LBD29", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SLB6-1", "protein_name": "LOB domain-containing protein 17", "gene_name": "LBD17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P59468-1", "protein_name": "LOB domain-containing protein 24", "gene_name": "LBD24", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P59469-1", "protein_name": "LOB domain-containing protein 34", "gene_name": "LBD34", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LHS8-1", "protein_name": "LOB domain-containing protein 33", "gene_name": "LBD33", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LIJ0-1", "protein_name": "LOB domain-containing protein 26", "gene_name": "LBD26", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LNB9-1", "protein_name": "LOB domain-containing protein 2", "gene_name": "LBD2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LQR0-1", "protein_name": "LOB domain-containing protein 1", "gene_name": "LBD1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LRW1-1", "protein_name": "LOB domain-containing protein 22", "gene_name": "LBD22", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O04479-1", "protein_name": "Protein ASYMMETRIC LEAVES 2", "gene_name": "AS2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22131-1", "protein_name": "LOB domain-containing protein 18", "gene_name": "LBD18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P59467-1", "protein_name": "LOB domain-containing protein 23", "gene_name": "LBD23", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M886-1", "protein_name": "LOB domain-containing protein 41", "gene_name": "LBD41", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SA51-1", "protein_name": "LOB domain-containing protein 3", "gene_name": "LBD3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCS4-1", "protein_name": "LOB domain-containing protein 28", "gene_name": "LBD28", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SK08-1", "protein_name": "LOB domain-containing protein 11", "gene_name": "LBD11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SRL8-1", "protein_name": "LOB domain-containing protein 21", "gene_name": "LBD21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SSM9-1", "protein_name": "LOB domain-containing protein 7", "gene_name": "LBD7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SZE8-1", "protein_name": "LOB domain-containing protein 39", "gene_name": "LBD39", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L5T5-1", "protein_name": "LOB domain-containing protein 15", "gene_name": "LBD15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SRV3-1", "protein_name": "LOB domain-containing protein 20", "gene_name": "LBD20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LBW3-1", "protein_name": "LOB domain-containing protein 12", "gene_name": "LBD12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FKZ3-1", "protein_name": "LOB domain-containing protein 36", "gene_name": "LBD36", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9STS6-1", "protein_name": "LOB domain-containing protein 27", "gene_name": "LBD27", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L8Q3-1", "protein_name": "LOB domain-containing protein 25", "gene_name": "LBD25", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C8V8-1", "protein_name": "LOB domain-containing protein 5", "gene_name": "LBD5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FFL3-1", "protein_name": "LOB domain-containing protein 35", "gene_name": "LBD35", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22132-1", "protein_name": "LOB domain-containing protein 19", "gene_name": "LBD19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49651-1", "protein_name": "LOB domain-containing protein 32", "gene_name": "LBD32", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O64836-1", "protein_name": "LOB domain-containing protein 10", "gene_name": "LBD10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81322-1", "protein_name": "LOB domain-containing protein 31", "gene_name": "LBD31", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O82198-1", "protein_name": "LOB domain-containing protein 9", "gene_name": "LBD9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81323-1", "protein_name": "LOB domain-containing protein 30", "gene_name": "LBD30", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FML4-1", "protein_name": "Protein LATERAL ORGAN BOUNDARIES", "gene_name": "LOB", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SHE9-1", "protein_name": "LOB domain-containing protein 4", "gene_name": "LBD4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJW5-1", "protein_name": "LOB domain-containing protein 14", "gene_name": "LBD14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FN11-1", "protein_name": "LOB domain-containing protein 37", "gene_name": "LBD37", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9AT61-1", "protein_name": "LOB domain-containing protein 13", "gene_name": "LBD13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZUP0-1", "protein_name": "LOB domain-containing protein 8", "gene_name": "LBD8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZW96-1", "protein_name": "LOB domain-containing protein 40", "gene_name": "LBD40", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SN23-1", "protein_name": "LOB domain-containing protein 38", "gene_name": "LBD38", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CA30-1", "protein_name": "LOB domain-containing protein 42", "gene_name": "LBD42", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SLB7-1", "protein_name": "LOB domain-containing protein 16", "gene_name": "LBD16", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M2J7", "url": "https://www.uniprot.org/uniprotkb/Q9M2J7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12068116", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 43 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Functional genomic analysis of the AUXIN RESPONSE FACTOR gene family members in Arabidopsis thaliana: unique and overlapping functions of ARF7 and ARF19.", "journal": "Plant Cell", "date": "2005", "authors": "Okushima Yoko, Overvoorde Paul J, Arima Kazunari, Alonso Jose M, Chan April, Chang Charlie, Ecker Joseph R, Hughes Beth, Lui Amy, Nguyen Diana, Onodera Courtney, Quach Hong, Smith Alison, Yu Guixia, Theologis Athanasios", "reference": { "type": "PubMed", "id": "15659631", "url": "https://pubmed.ncbi.nlm.nih.gov/15659631" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M2J7-1", "protein_name": "LOB domain-containing protein 29", "gene_name": "LBD29", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SLB6-1", "protein_name": "LOB domain-containing protein 17", "gene_name": "LBD17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22131-1", "protein_name": "LOB domain-containing protein 18", "gene_name": "LBD18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XID4-1", "protein_name": "Auxin response factor 12", "gene_name": "ARF12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZPY6-1", "protein_name": "Auxin response factor 11", "gene_name": "ARF11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZTX8-1", "protein_name": "Auxin response factor 6", "gene_name": "ARF6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FGV1-1", "protein_name": "Auxin response factor 8", "gene_name": "ARF8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94JM3-1", "protein_name": "Auxin response factor 2", "gene_name": "ARF2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P93022-1", "protein_name": "Auxin response factor 7", "gene_name": "ARF7; NPH4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RYC8-1", "protein_name": "Auxin response factor 19", "gene_name": "ARF19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C7I9-1", "protein_name": "Auxin response factor 20", "gene_name": "ARF20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C8N7-1", "protein_name": "Auxin response factor 22", "gene_name": "ARF22", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FX25-1", "protein_name": "Auxin response factor 13", "gene_name": "ARF13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SLB7-1", "protein_name": "LOB domain-containing protein 16", "gene_name": "LBD16", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M2J7", "url": "https://www.uniprot.org/uniprotkb/Q9M2J7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15659631", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 14 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, 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"n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "ARF7 and ARF19 regulate lateral root formation via direct activation of LBD/ASL genes in Arabidopsis.", "journal": "The Plant cell", "date": "2007-01", "authors": "Okushima Yoko, Fukaki Hidehiro, Onoda Makoto, Theologis Athanasios, Tasaka Masao", "reference": { "type": "PubMed", "id": "17259263", "url": "https://pubmed.ncbi.nlm.nih.gov/17259263" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M2J7-1", "protein_name": "LOB domain-containing protein 29", "gene_name": "LBD29", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LHS8-1", "protein_name": "LOB domain-containing protein 33", "gene_name": "LBD33", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P93022-1", "protein_name": "Auxin response factor 7", "gene_name": "ARF7; NPH4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RYC8-1", "protein_name": "Auxin response factor 19", "gene_name": "ARF19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SLB7-1", "protein_name": "LOB domain-containing protein 16", "gene_name": "LBD16", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M2J7", "url": "https://www.uniprot.org/uniprotkb/Q9M2J7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.17259263", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Characterization of genes in the ASYMMETRIC LEAVES2/LATERAL ORGAN BOUNDARIES (AS2/LOB) family in Arabidopsis thaliana, and functional and molecular comparisons between AS2 and other family members.", "journal": "Plant J.", "date": "2009", "authors": "Matsumura Yoko, Iwakawa Hidekazu, Machida Yasunori, Machida Chiyoko", "reference": { "type": "PubMed", "id": "19154202", "url": "https://pubmed.ncbi.nlm.nih.gov/19154202" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M2J7-1", "protein_name": "LOB domain-containing protein 29", "gene_name": "LBD29", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SLB6-1", "protein_name": "LOB domain-containing protein 17", "gene_name": "LBD17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P59468-1", "protein_name": "LOB domain-containing protein 24", "gene_name": "LBD24", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LHS8-1", "protein_name": "LOB domain-containing protein 33", "gene_name": "LBD33", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LIJ0-1", "protein_name": "LOB domain-containing protein 26", "gene_name": "LBD26", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LNB9-1", "protein_name": "LOB domain-containing protein 2", "gene_name": "LBD2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LQR0-1", "protein_name": "LOB domain-containing protein 1", "gene_name": "LBD1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LRW1-1", "protein_name": "LOB domain-containing protein 22", "gene_name": "LBD22", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O04479-1", "protein_name": "Protein ASYMMETRIC LEAVES 2", "gene_name": "AS2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22131-1", "protein_name": "LOB domain-containing protein 18", "gene_name": "LBD18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P59467-1", "protein_name": "LOB domain-containing protein 23", "gene_name": "LBD23", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M886-1", "protein_name": "LOB domain-containing protein 41", "gene_name": "LBD41", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SA51-1", "protein_name": "LOB domain-containing protein 3", "gene_name": "LBD3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCS4-1", "protein_name": "LOB domain-containing protein 28", "gene_name": "LBD28", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SK08-1", "protein_name": "LOB domain-containing protein 11", "gene_name": "LBD11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SRL8-1", "protein_name": "LOB domain-containing protein 21", "gene_name": "LBD21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SSM9-1", "protein_name": "LOB domain-containing protein 7", "gene_name": "LBD7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SZE8-1", "protein_name": "LOB domain-containing protein 39", "gene_name": "LBD39", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L5T5-1", "protein_name": "LOB domain-containing protein 15", "gene_name": "LBD15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SRV3-1", "protein_name": "LOB domain-containing protein 20", "gene_name": "LBD20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LBW3-1", "protein_name": "LOB domain-containing protein 12", "gene_name": "LBD12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FKZ3-1", "protein_name": "LOB domain-containing protein 36", "gene_name": "LBD36", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9STS6-1", "protein_name": "LOB domain-containing protein 27", "gene_name": "LBD27", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L8Q3-1", "protein_name": "LOB domain-containing protein 25", "gene_name": "LBD25", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C8V8-1", "protein_name": "LOB domain-containing protein 5", "gene_name": "LBD5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FFL3-1", "protein_name": "LOB domain-containing protein 35", "gene_name": "LBD35", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22132-1", "protein_name": "LOB domain-containing protein 19", "gene_name": "LBD19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49651-1", "protein_name": "LOB domain-containing protein 32", "gene_name": "LBD32", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O64836-1", "protein_name": "LOB domain-containing protein 10", "gene_name": "LBD10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81322-1", "protein_name": "LOB domain-containing protein 31", "gene_name": "LBD31", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O82198-1", "protein_name": "LOB domain-containing protein 9", "gene_name": "LBD9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81323-1", "protein_name": "LOB domain-containing protein 30", "gene_name": "LBD30", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FML4-1", "protein_name": "Protein LATERAL ORGAN BOUNDARIES", "gene_name": "LOB", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SHE9-1", "protein_name": "LOB domain-containing protein 4", "gene_name": "LBD4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJW5-1", "protein_name": "LOB domain-containing protein 14", "gene_name": "LBD14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FN11-1", "protein_name": "LOB domain-containing protein 37", "gene_name": "LBD37", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9AT61-1", "protein_name": "LOB domain-containing protein 13", "gene_name": "LBD13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZUP0-1", "protein_name": "LOB domain-containing protein 8", "gene_name": "LBD8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZW96-1", "protein_name": "LOB domain-containing protein 40", "gene_name": "LBD40", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SN23-1", "protein_name": "LOB domain-containing protein 38", "gene_name": "LBD38", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CA30-1", "protein_name": "LOB domain-containing protein 42", "gene_name": "LBD42", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SLB7-1", "protein_name": "LOB domain-containing protein 16", "gene_name": "LBD16", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M2J7", "url": "https://www.uniprot.org/uniprotkb/Q9M2J7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.19154202", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 42 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "AtBS14a and AtBS14b, two Bet1/Sft1-like SNAREs from Arabidopsis thaliana that complement mutations in the yeast SFT1 gene.", "journal": "FEBS Lett.", "date": "2001", "authors": "Tai W C, Banfield D K", "reference": { "type": "PubMed", "id": "11445081", "url": "https://pubmed.ncbi.nlm.nih.gov/11445081" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M2J9-1", "protein_name": "Bet1-like SNARE 1-1", "gene_name": "BET11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94CG2-1", "protein_name": "Bet1-like SNARE 1-2", "gene_name": "BET12", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M2J9", "url": "https://www.uniprot.org/uniprotkb/Q9M2J9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11445081", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Tocopherol cyclase (VTE1) localization and vitamin E accumulation in chloroplast plastoglobule lipoprotein particles.", "journal": "J. Biol. Chem.", "date": "2006", "authors": "Vidi Pierre-Alexandre, Kanwischer Marion, Baginsky Sacha, Austin Jotham R, Csucs Gabor, D\u00f6rmann Peter, Kessler Felix, Br\u00e9h\u00e9lin Claire", "reference": { "type": "PubMed", "id": "16414959", "url": "https://pubmed.ncbi.nlm.nih.gov/16414959" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M2P7-1", "protein_name": "Probable plastid-lipid-associated protein 9, chloroplastic", "gene_name": "PAP9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q944G9-1", "protein_name": "Fructose-bisphosphate aldolase 2, chloroplastic", "gene_name": "FBA2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81439-1", "protein_name": "Probable plastid-lipid-associated protein 1, chloroplastic", "gene_name": "PAP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q96242-1", "protein_name": "Allene oxide synthase, chloroplastic", "gene_name": "CYP74A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94FY7-1", "protein_name": "Tocopherol cyclase, chloroplastic", "gene_name": "VTE1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJU4-1", "protein_name": "Fructose-bisphosphate aldolase 1, chloroplastic", "gene_name": "FBA1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LW57-1", "protein_name": "Plastid-lipid-associated protein 6, chloroplastic", "gene_name": "FIB4; PAP6", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M2P7", "url": "https://www.uniprot.org/uniprotkb/Q9M2P7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16414959", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 7 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Protein profiling of plastoglobules in chloroplasts and chromoplasts. A surprising site for differential accumulation of metabolic enzymes.", "journal": "Plant Physiol.", "date": "2006", "authors": "Ytterberg A Jimmy, Peltier Jean-Benoit, van Wijk Klaas J", "reference": { "type": "PubMed", "id": "16461379", "url": "https://pubmed.ncbi.nlm.nih.gov/16461379" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M2P7-1", "protein_name": "Probable plastid-lipid-associated protein 9, chloroplastic", "gene_name": "PAP9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZVN2-1", "protein_name": "Phytyl ester synthase 1, chloroplastic", "gene_name": "PES1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FZ89-1", "protein_name": "UPF0426 protein At1g28150, chloroplastic", "gene_name": "F13K9.24; F3H9.19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q944G9-1", "protein_name": "Fructose-bisphosphate aldolase 2, chloroplastic", "gene_name": "FBA2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81439-1", "protein_name": "Probable plastid-lipid-associated protein 1, chloroplastic", "gene_name": "PAP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9MA15-1", "protein_name": "Protein ACTIVITY OF BC1 COMPLEX KINASE 3, chloroplastic", "gene_name": "ABC1K3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49629-1", "protein_name": "Probable plastid-lipid-associated protein 2, chloroplastic", "gene_name": "PAP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O82291-1", "protein_name": "Probable plastid-lipid-associated protein 3, chloroplastic", "gene_name": "PAP3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SR77-1", "protein_name": "Heme-binding-like protein At3g10130, chloroplastic", "gene_name": "T22K18.4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WPT7-1", "protein_name": "Uncharacterized methyltransferase At2g41040, chloroplastic", "gene_name": "T3K9.19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S9M1-1", "protein_name": "Probable plastid-lipid-associated protein 13, chloroplastic", "gene_name": "PAP13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LDV3-1", "protein_name": "Uncharacterized protein At4g13200, chloroplastic", "gene_name": "F17N18.90", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94BU1-1", "protein_name": "Uncharacterized aarF domain-containing protein kinase At1g71810, chloroplastic", "gene_name": "F14O23.19; F14O23_17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ASX5-1", "protein_name": "Uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic", "gene_name": "K2A11.7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6DYE4-1", "protein_name": "ATPase GET3D, chloroplastic", "gene_name": "GET3D", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8H124-1", "protein_name": "Uncharacterized protein At2g34460, chloroplastic", "gene_name": "T31E10.20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LBV4-1", "protein_name": "Uncharacterized methyltransferase At1g78140, chloroplastic", "gene_name": "T11I11.8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W4F1-1", "protein_name": "Probable plastid-lipid-associated protein 10, chloroplastic", "gene_name": "PAP10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XJ36-1", "protein_name": "ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic", "gene_name": "CLPR2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZU52-1", "protein_name": "Fructose-bisphosphate aldolase 3, chloroplastic", "gene_name": "FBA3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49675-1", "protein_name": "Probable carotenoid cleavage dioxygenase 4, chloroplastic", "gene_name": "CCD4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RWG1-1", "protein_name": "Protein ACTIVITY OF BC1 COMPLEX KINASE 1, chloroplastic", "gene_name": "ABC1K1; ACDO1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GXR9-1", "protein_name": "Alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial", "gene_name": "NDC1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P10896-1", "protein_name": "Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic", "gene_name": "RCA", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q96242-1", "protein_name": "Allene oxide synthase, chloroplastic", "gene_name": "CYP74A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94FY7-1", "protein_name": "Tocopherol cyclase, chloroplastic", "gene_name": "VTE1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJU4-1", "protein_name": "Fructose-bisphosphate aldolase 1, chloroplastic", "gene_name": "FBA1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FVR6-1", "protein_name": "Uncharacterized protein At1g32220, chloroplastic", "gene_name": "F3C3.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O04616-1", "protein_name": "Protein CURVATURE THYLAKOID 1A, chloroplastic", "gene_name": "CURT1A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LW57-1", "protein_name": "Plastid-lipid-associated protein 6, chloroplastic", "gene_name": "FIB4; PAP6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LW26-1", "protein_name": "Phytyl ester synthase 2, chloroplastic", "gene_name": "PES2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LYA9-1", "protein_name": "Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic", "gene_name": "CSP41A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SA52-1", "protein_name": "Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic", "gene_name": "CRB; CSP41B", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M2P7", "url": "https://www.uniprot.org/uniprotkb/Q9M2P7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16461379", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 33 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Plastoglobules: a new address for targeting recombinant proteins in the chloroplast.", "journal": "BMC Biotechnol.", "date": "2007", "authors": "Vidi Pierre-Alexandre, Kessler Felix, Br\u00e9h\u00e9lin Claire", "reference": { "type": "PubMed", "id": "17214877", "url": "https://pubmed.ncbi.nlm.nih.gov/17214877" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M2P7-1", "protein_name": "Probable plastid-lipid-associated protein 9, chloroplastic", "gene_name": "PAP9", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M2P7", "url": "https://www.uniprot.org/uniprotkb/Q9M2P7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.17214877", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "AGF1, an AT-hook protein, is necessary for the negative feedback of AtGA3ox1 encoding GA 3-oxidase.", "journal": "Plant physiology", "date": "2007-03", "authors": "Matsushita Akane, Furumoto Tsuyoshi, Ishida Sarahmi, Takahashi Yohsuke", "reference": { "type": "PubMed", "id": "17277098", "url": "https://pubmed.ncbi.nlm.nih.gov/17277098" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M2S3-1", "protein_name": "AT-hook motif nuclear-localized protein 15", "gene_name": "AHL15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SVS8-1", "protein_name": "Gibberellin 3-beta-dioxygenase 3", "gene_name": "GA3OX3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C971-1", "protein_name": "Gibberellin 3-beta-dioxygenase 4", "gene_name": "GA3OX4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZT84-1", "protein_name": "Gibberellin 3-beta-dioxygenase 2", "gene_name": "GA3OX2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39103-1", "protein_name": "Gibberellin 3-beta-dioxygenase 1", "gene_name": "GA3OX1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6DBQ1-1", "protein_name": "AT-hook motif nuclear-localized protein 25", "gene_name": "AHL25", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M2S3", "url": "https://www.uniprot.org/uniprotkb/Q9M2S3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.17277098", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Overexpression of AHL20 negatively regulates defenses in Arabidopsis.", "journal": "Journal of integrative plant biology", "date": "2010-09", "authors": "Lu Haibin, Zou Yan, Feng Na", "reference": { "type": "PubMed", "id": "20738724", "url": "https://pubmed.ncbi.nlm.nih.gov/20738724" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M2S3-1", "protein_name": "AT-hook motif nuclear-localized protein 15", "gene_name": "AHL15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SR17-1", "protein_name": "AT-hook motif nuclear-localized protein 19", "gene_name": "AHL19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GWQ2-1", "protein_name": "AT-hook motif nuclear-localized protein 20", "gene_name": "AHL20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S7C9-1", "protein_name": "AT-hook motif nuclear-localized protein 27", "gene_name": "AHL27", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M2S3", "url": "https://www.uniprot.org/uniprotkb/Q9M2S3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.20738724", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Immunophilins and parvulins. Superfamily of peptidyl prolyl isomerases in Arabidopsis.", "journal": "Plant Physiol.", "date": "2004", "authors": "He Zengyong, Li Legong, Luan Sheng", "reference": { "type": "PubMed", "id": "15047905", "url": "https://pubmed.ncbi.nlm.nih.gov/15047905" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M2S7-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase FKBP20-1", "gene_name": "FKBP20-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SIH1-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase CYP18-2", "gene_name": "CYP18-2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P82869-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic", "gene_name": "CYP37", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38867-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase CYP19-3", "gene_name": "CYP19-3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38936-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase FKBP15-2", "gene_name": "FKBP15-2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4HTT6-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic", "gene_name": "CYP26-2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LYR5-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase FKBP19, chloroplastic", "gene_name": "FKBP19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLB3-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase FKBP15-3", "gene_name": "FKBP15-3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LY75-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase CYP63", "gene_name": "CYP63", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22870-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase FKBP16-3, chloroplastic", "gene_name": "FKBP16-3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O65220-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic", "gene_name": "CYP28", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SR70-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase FKBP16-4, chloroplastic", "gene_name": "FKBP16-4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZVJ4-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase CYP22", "gene_name": "CYP22", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q944B0-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase FKBP16-1, chloroplastic", "gene_name": "FKBP16-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L8W5-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase CYP21-2", "gene_name": "CYP21-2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RWY7-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase CYP95", "gene_name": "CYP95", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S9L5-1", "protein_name": "Trigger factor-like protein TIG, Chloroplastic", "gene_name": "TIG", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94A16-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase CYP21-3, mitochondrial", "gene_name": "CYP21-3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C835-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase CYP21-4", "gene_name": "CYP21-4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FJX0-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase CYP65", "gene_name": "CYP65", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SKQ0-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase CYP19-2", "gene_name": "CYP19-2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LDR3-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase CYP23", "gene_name": "CYP23", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LB65-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase FKBP17-3, chloroplastic", "gene_name": "FKBP17-3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J9Q6-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase FKBP43", "gene_name": "FKBP43", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49605-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase CYP21-1", "gene_name": "CYP21-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81864-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase FKBP17-1, chloroplastic", "gene_name": "FKBP17-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38935-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase FKBP15-1", "gene_name": "FKBP15-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q7DMA9-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase PASTICCINO1", "gene_name": "PAS1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93ZG9-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase FKBP53", "gene_name": "FKBP53", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W4D0-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase CYP71", "gene_name": "CYP71", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6Q151-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase CYP59", "gene_name": "CYP59", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38931-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase FKBP62", "gene_name": "FKBP62; ROF1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P34791-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic", "gene_name": "CYP20-3; ROC4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P34790-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase CYP18-3", "gene_name": "CYP18-3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCY2-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic", "gene_name": "FKBP13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ASS6-1", "protein_name": "Photosynthetic NDH subunit of lumenal location 5, chloroplastic", "gene_name": "PNSL5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C566-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase CYP40", "gene_name": "CYP40", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LDC0-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase FKBP42", "gene_name": "FKBP42", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LM71-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic", "gene_name": "FKBP18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LDY5-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase FKBP17-2, chloroplastic", "gene_name": "FKBP17-2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LIK6-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase CYP26-1", "gene_name": "CYP26-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LPC7-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase CYP18-1", "gene_name": "CYP18-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WRJ7-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic", "gene_name": "FKBP20-2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38900-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase CYP19-1", "gene_name": "CYP19-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q42406-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase CYP18-4", "gene_name": "CYP18-4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6Q152-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase CYP57", "gene_name": "CYP57", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LDP4-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase CYP19-4", "gene_name": "CYP19-4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FJL3-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase FKBP65", "gene_name": "FKBP65", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LGG0-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase FKBP12", "gene_name": "FKBP12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCY3-1", "protein_name": "Photosynthetic NDH subunit of lumenal location 4, chloroplastic", "gene_name": "PNSL4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SP02-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase CYP20-1", "gene_name": "CYP20-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SSA5-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic", "gene_name": "CYP38", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M2S7", "url": "https://www.uniprot.org/uniprotkb/Q9M2S7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15047905", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 52 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Blind homologous R2R3 Myb genes control the pattern of lateral meristem initiation in Arabidopsis.", "journal": "The Plant cell", "date": "2006-03", "authors": "M\u00fcller D\u00f6rte, Schmitz Gregor, Theres Klaus", "reference": { "type": "PubMed", "id": "16461581", "url": "https://pubmed.ncbi.nlm.nih.gov/16461581" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M2Y9-1", "protein_name": "Transcription factor RAX3", "gene_name": "RAX3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JSU0-1", "protein_name": "Transcription factor MYB87", "gene_name": "MYB87", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FG68-1", "protein_name": "Transcription factor RAX1", "gene_name": "RAX1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJL7-1", "protein_name": "Transcription factor RAX2", "gene_name": "RAX2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FKL2-1", "protein_name": "Transcription factor MYB36", "gene_name": "MYB36", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M2Y9", "url": "https://www.uniprot.org/uniprotkb/Q9M2Y9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16461581", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The genetic architecture of shoot branching in Arabidopsis thaliana: a comparative assessment of candidate gene associations vs. quantitative trait locus mapping.", "journal": "Genetics", "date": "2007-06", "authors": "Ehrenreich Ian M, Stafford Phillip A, Purugganan Michael D", "reference": { "type": "PubMed", "id": "17435248", "url": "https://pubmed.ncbi.nlm.nih.gov/17435248" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M2Y9-1", "protein_name": "Transcription factor RAX3", "gene_name": "RAX3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S7R3-1", "protein_name": "Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10", "gene_name": "LSH10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22267-1", "protein_name": "Histidine kinase CKI1", "gene_name": "CKI1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q42371-1", "protein_name": "LRR receptor-like serine/threonine-protein kinase ERECTA", "gene_name": "ERECTA", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q949U1-1", "protein_name": "Dihomomethionine N-hydroxylase", "gene_name": "CYP79F1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FG68-1", "protein_name": "Transcription factor RAX1", "gene_name": "RAX1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P93024-1", "protein_name": "Auxin response factor 5", "gene_name": "ARF5; MP", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C5U0-1", "protein_name": "Histidine kinase 4", "gene_name": "AHK4; WOL", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJL7-1", "protein_name": "Transcription factor RAX2", "gene_name": "RAX2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q01593-1", "protein_name": "B3 domain-containing transcription factor ABI3", "gene_name": "ABI3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q570C0-1", "protein_name": "Protein TRANSPORT INHIBITOR RESPONSE 1", "gene_name": "TIR1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6NMD6-1", "protein_name": "Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE", "gene_name": "ARGOS", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SE43-1", "protein_name": "Homeobox-leucine zipper protein REVOLUTA", "gene_name": "REV", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M2Y9", "url": "https://www.uniprot.org/uniprotkb/Q9M2Y9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.17435248", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 13 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] 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Biol. Chem.", "date": "2004", "authors": "Karamysheva Zemfira N, Surovtseva Yulia V, Vespa Laurent, Shakirov Eugene V, Shippen Dorothy E", "reference": { "type": "PubMed", "id": "15364931", "url": "https://pubmed.ncbi.nlm.nih.gov/15364931" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M347-1", "protein_name": "Telomere repeat-binding protein 6", "gene_name": "TRP6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C7B1-1", "protein_name": "Telomere repeat-binding protein 3", "gene_name": "TRP3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FFY9-1", "protein_name": "Telomere repeat-binding protein 4", "gene_name": "TRP4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6R0E3-1", "protein_name": "Telomere repeat-binding protein 5", "gene_name": "TRP5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L7L8-1", "protein_name": "Telomere repeat-binding protein 1", "gene_name": "TRP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SNB9-1", "protein_name": "Telomere repeat-binding protein 2", "gene_name": "TRFL1; 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Impaired in shoot regeneration.", "evidence": [ { "database": "UniProtKB", "id": "B5BT18", "url": "https://www.uniprot.org/uniprotkb/B5BT18" }, { "database": "PubMed", "id": "19054368", "url": "https://pubmed.ncbi.nlm.nih.gov/19054368" } ], "uniprot_canonical_ac": "B5BT18-1" } ], "record_id": "pubmed.19054368", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "Loss of Multiple ABCB Auxin Transporters Recapitulates the Major twisted dwarf 1 Phenotypes in Arabidopsis thaliana.", "journal": "Frontiers in plant science", "date": "2022", "authors": "Jenness Mark K, Tayengwa Reuben, Bate Gabrielle A, Tapken Wiebke, Zhang Yuqin, Pang Changxu, Murphy Angus S", "reference": { "type": "PubMed", "id": "35528937", "url": "https://pubmed.ncbi.nlm.nih.gov/35528937" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M3B9-1", "protein_name": "ABC transporter B family member 20", "gene_name": "ABCB20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LPT1-1", "protein_name": "ABC transporter B family member 6", "gene_name": "ABCB6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LDC0-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase FKBP42", "gene_name": "FKBP42", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LJX0-1", "protein_name": "ABC transporter B family member 19", "gene_name": "ABCB19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZR72-1", "protein_name": "ABC transporter B family member 1", "gene_name": "ABCB1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FWX7-1", "protein_name": "ABC transporter B family member 11", "gene_name": "ABCB11", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M3B9", "url": "https://www.uniprot.org/uniprotkb/Q9M3B9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.35528937", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "uniprot_canonical_ac", 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Light stress-regulated two-helix proteins in Arabidopsis thaliana related to the chlorophyll a/b-binding gene family.", "journal": "Proc. Natl. Acad. Sci. U.S.A.", "date": "2000", "authors": "Heddad M, Adamska I", "reference": { "type": "PubMed", "id": "10725357", "url": "https://pubmed.ncbi.nlm.nih.gov/10725357" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M7I9-1", "protein_name": "Stress enhanced protein 1, chloroplastic", "gene_name": "SEP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJ02-1", "protein_name": "Stress enhanced protein 2, chloroplastic", "gene_name": "SEP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94K66-1", "protein_name": "Early light-induced protein 2, chloroplastic", "gene_name": "ELIP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P93735-1", "protein_name": "Early light-induced protein 1, chloroplastic", "gene_name": "ELIP1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M7I9", "url": "https://www.uniprot.org/uniprotkb/Q9M7I9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.10725357", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Overexpression of LSH1, a member of an uncharacterised gene family, causes enhanced light regulation of seedling development.", "journal": "Plant J.", "date": "2004", "authors": "Zhao Li, Nakazawa Miki, Takase Tomoyuki, Manabe Katsushi, Kobayashi Masatomo, Seki Motoaki, Shinozaki Kazuo, Matsui Minami", "reference": { "type": "PubMed", "id": "14871309", "url": "https://pubmed.ncbi.nlm.nih.gov/14871309" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M836-1", "protein_name": "Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 2", "gene_name": "LSH2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S7R3-1", "protein_name": "Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10", "gene_name": "LSH10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SN52-1", "protein_name": "Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 9", "gene_name": "LSH9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6NNI3-1", "protein_name": "Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1", "gene_name": 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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